Subset (25)

10k_all_consequences · 20k rows

Split (2)

validation · 10k rows

chrom large_stringclasses 5 values	pos int64 286k 308M	ref large_stringclasses 4 values	alt large_stringclasses 4 values	AC int64 4 2.3k	AN int64 2.45k 2.45k	AF float64 0 0.94	MAF float64 0 0.5	consequence large_stringclasses 11 values	original_consequence large_stringclasses 18 values
1	10,907,975	G	C	10	2,448	0.004085	0.004085	missense_variant	missense_variant
1	11,066,840	A	G	6	2,448	0.002451	0.002451	intergenic_variant	intergenic_variant
1	11,197,769	C	T	16	2,448	0.006536	0.006536	grouped_start_stop	stop_gained
1	11,480,949	C	G	266	2,448	0.10866	0.10866	grouped_start_stop	stop_gained
1	11,968,894	C	T	50	2,448	0.020425	0.020425	non_coding_transcript_exon_variant	non_coding_transcript_exon_variant
1	11,968,973	C	T	130	2,448	0.053105	0.053105	non_coding_transcript_exon_variant	non_coding_transcript_exon_variant
1	11,969,935	T	A	112	2,448	0.045752	0.045752	grouped_start_stop	stop_gained
1	11,970,071	C	A	828	2,448	0.338235	0.338235	grouped_start_stop	start_lost
1	12,075,672	C	G	382	2,448	0.156046	0.156046	5_prime_UTR_variant	5_prime_UTR_variant
1	12,253,613	G	A	604	2,448	0.246732	0.246732	grouped_splice_region	splice_region_variant
1	12,255,317	T	C	4	2,448	0.001634	0.001634	5_prime_UTR_variant	5_prime_UTR_variant
1	12,260,782	C	A	126	2,448	0.051471	0.051471	synonymous_variant	synonymous_variant
1	12,265,992	G	T	180	2,448	0.073529	0.073529	intron_variant	intron_variant
1	12,333,448	A	G	24	2,448	0.009804	0.009804	intergenic_variant	intergenic_variant
1	12,342,584	G	C	4	2,448	0.001634	0.001634	downstream_gene_variant	downstream_gene_variant
1	12,423,337	G	A	862	2,448	0.352124	0.352124	intron_variant	intron_variant
1	12,446,357	C	A	4	2,448	0.001634	0.001634	intron_variant	intron_variant
1	12,517,592	C	A	270	2,448	0.110294	0.110294	3_prime_UTR_variant	3_prime_UTR_variant
1	12,553,661	G	A	50	2,448	0.020425	0.020425	upstream_gene_variant	upstream_gene_variant
1	12,649,630	C	T	44	2,448	0.017974	0.017974	grouped_start_stop	stop_gained
1	12,919,093	T	C	36	2,448	0.014706	0.014706	5_prime_UTR_variant	5_prime_UTR_variant
1	12,969,522	A	G	1,166	2,448	0.476307	0.476307	intergenic_variant	intergenic_variant
1	13,074,182	A	G	6	2,448	0.002451	0.002451	missense_variant	missense_variant
1	13,165,538	C	T	6	2,448	0.002451	0.002451	upstream_gene_variant	upstream_gene_variant
1	13,561,134	T	G	1,782	2,448	0.727941	0.272059	downstream_gene_variant	downstream_gene_variant
1	13,623,491	C	A	1,276	2,448	0.521242	0.478758	upstream_gene_variant	upstream_gene_variant
1	13,757,154	T	A	1,250	2,448	0.510621	0.489379	downstream_gene_variant	downstream_gene_variant
1	13,860,457	A	G	8	2,448	0.003268	0.003268	non_coding_transcript_exon_variant	non_coding_transcript_exon_variant
1	13,862,232	A	G	1,742	2,448	0.711601	0.288399	grouped_splice_region	splice_polypyrimidine_tract_variant
1	14,146,288	T	C	174	2,448	0.071078	0.071078	intergenic_variant	intergenic_variant
1	14,206,039	C	A	10	2,448	0.004085	0.004085	intron_variant	intron_variant
1	14,216,546	C	T	188	2,448	0.076797	0.076797	5_prime_UTR_variant	5_prime_UTR_variant
1	14,343,019	T	G	4	2,448	0.001634	0.001634	synonymous_variant	synonymous_variant
1	14,481,103	T	C	1,496	2,448	0.611111	0.388889	synonymous_variant	synonymous_variant
1	14,487,556	T	C	1,124	2,448	0.45915	0.45915	intron_variant	intron_variant
1	14,507,401	C	A	4	2,448	0.001634	0.001634	5_prime_UTR_variant	5_prime_UTR_variant
1	14,727,359	G	A	6	2,448	0.002451	0.002451	grouped_start_stop	start_lost
1	14,910,204	C	T	420	2,448	0.171569	0.171569	grouped_splice_region	splice_polypyrimidine_tract_variant
1	14,913,625	C	A	716	2,448	0.292484	0.292484	3_prime_UTR_variant	3_prime_UTR_variant
1	14,913,871	G	C	4	2,448	0.001634	0.001634	3_prime_UTR_variant	3_prime_UTR_variant
1	15,020,565	G	A	4	2,448	0.001634	0.001634	synonymous_variant	synonymous_variant
1	15,054,026	A	G	1,670	2,448	0.68219	0.31781	intron_variant	intron_variant
1	15,072,616	G	C	20	2,448	0.00817	0.00817	grouped_start_stop	stop_gained
1	15,198,652	G	T	670	2,448	0.273693	0.273693	grouped_splice_region	splice_region_variant
1	15,216,956	A	G	226	2,448	0.09232	0.09232	grouped_start_stop	start_lost
1	15,260,454	T	A	584	2,448	0.238562	0.238562	downstream_gene_variant	downstream_gene_variant
1	15,262,055	C	T	14	2,448	0.005719	0.005719	upstream_gene_variant	upstream_gene_variant
1	15,271,505	A	T	44	2,448	0.017974	0.017974	intron_variant	intron_variant
1	15,286,428	C	G	22	2,448	0.008987	0.008987	non_coding_transcript_exon_variant	non_coding_transcript_exon_variant
1	15,298,368	T	C	10	2,448	0.004085	0.004085	downstream_gene_variant	downstream_gene_variant
1	15,313,641	C	T	4	2,448	0.001634	0.001634	intergenic_variant	intergenic_variant
1	15,478,423	C	T	72	2,448	0.029412	0.029412	synonymous_variant	synonymous_variant
1	15,582,585	C	T	656	2,448	0.267974	0.267974	upstream_gene_variant	upstream_gene_variant
1	15,659,516	T	G	510	2,448	0.208333	0.208333	grouped_splice_region	splice_polypyrimidine_tract_variant
1	15,865,590	T	C	4	2,448	0.001634	0.001634	3_prime_UTR_variant	3_prime_UTR_variant
1	15,867,093	G	A	68	2,448	0.027778	0.027778	missense_variant	missense_variant
1	15,867,583	A	G	4	2,448	0.001634	0.001634	missense_variant	missense_variant
1	16,036,467	G	A	52	2,448	0.021242	0.021242	3_prime_UTR_variant	3_prime_UTR_variant
1	16,037,271	T	C	452	2,448	0.184641	0.184641	downstream_gene_variant	downstream_gene_variant
1	16,127,432	C	T	4	2,448	0.001634	0.001634	non_coding_transcript_exon_variant	non_coding_transcript_exon_variant
1	16,127,474	G	C	634	2,448	0.258987	0.258987	non_coding_transcript_exon_variant	non_coding_transcript_exon_variant
1	16,127,620	G	T	294	2,448	0.120098	0.120098	non_coding_transcript_exon_variant	non_coding_transcript_exon_variant
1	16,179,140	A	T	6	2,448	0.002451	0.002451	non_coding_transcript_exon_variant	non_coding_transcript_exon_variant
1	16,179,287	C	T	346	2,448	0.14134	0.14134	non_coding_transcript_exon_variant	non_coding_transcript_exon_variant
1	16,256,052	G	C	10	2,448	0.004085	0.004085	upstream_gene_variant	upstream_gene_variant
1	16,618,499	G	A	650	2,448	0.265523	0.265523	grouped_splice_region	splice_polypyrimidine_tract_variant
1	16,706,110	A	G	142	2,448	0.058007	0.058007	non_coding_transcript_exon_variant	non_coding_transcript_exon_variant
1	16,737,966	A	G	46	2,448	0.018791	0.018791	upstream_gene_variant	upstream_gene_variant
1	16,744,391	G	A	98	2,448	0.040033	0.040033	downstream_gene_variant	downstream_gene_variant
1	17,036,817	G	A	1,566	2,448	0.639706	0.360294	5_prime_UTR_variant	5_prime_UTR_variant
1	17,210,750	A	G	22	2,448	0.008987	0.008987	5_prime_UTR_variant	5_prime_UTR_variant
1	17,430,875	A	G	422	2,448	0.172386	0.172386	missense_variant	missense_variant
1	17,621,302	C	T	22	2,448	0.008987	0.008987	5_prime_UTR_variant	5_prime_UTR_variant
1	17,703,600	G	T	10	2,448	0.004085	0.004085	missense_variant	missense_variant
1	17,873,807	T	G	6	2,448	0.002451	0.002451	synonymous_variant	synonymous_variant
1	17,875,730	T	C	648	2,448	0.264706	0.264706	synonymous_variant	synonymous_variant
1	17,901,353	G	C	22	2,448	0.008987	0.008987	synonymous_variant	synonymous_variant
1	17,937,129	C	A	106	2,448	0.043301	0.043301	grouped_start_stop	stop_gained
1	17,942,164	C	T	16	2,448	0.006536	0.006536	3_prime_UTR_variant	3_prime_UTR_variant
1	18,044,090	T	A	330	2,448	0.134804	0.134804	3_prime_UTR_variant	3_prime_UTR_variant
1	18,084,361	T	A	6	2,448	0.002451	0.002451	intron_variant	intron_variant
1	18,347,001	A	G	1,034	2,448	0.422386	0.422386	intergenic_variant	intergenic_variant
1	18,398,733	G	T	856	2,448	0.349673	0.349673	5_prime_UTR_variant	5_prime_UTR_variant
1	18,398,973	G	A	32	2,448	0.013072	0.013072	5_prime_UTR_variant	5_prime_UTR_variant
1	18,641,545	A	C	322	2,448	0.131536	0.131536	intron_variant	intron_variant
1	18,646,340	T	A	326	2,448	0.13317	0.13317	grouped_splice_region	splice_region_variant
1	18,786,151	G	C	6	2,448	0.002451	0.002451	3_prime_UTR_variant	3_prime_UTR_variant
1	18,830,159	T	G	1,386	2,448	0.566176	0.433824	downstream_gene_variant	downstream_gene_variant
1	19,047,377	C	G	676	2,448	0.276144	0.276144	upstream_gene_variant	upstream_gene_variant
1	19,308,616	G	T	474	2,448	0.193627	0.193627	upstream_gene_variant	upstream_gene_variant
1	19,312,944	G	T	4	2,448	0.001634	0.001634	downstream_gene_variant	downstream_gene_variant
1	19,316,575	T	C	4	2,448	0.001634	0.001634	intergenic_variant	intergenic_variant
1	19,445,917	C	T	548	2,448	0.223856	0.223856	intergenic_variant	intergenic_variant
1	19,640,438	G	A	16	2,448	0.006536	0.006536	grouped_start_stop	stop_gained
1	19,736,708	C	G	50	2,448	0.020425	0.020425	non_coding_transcript_exon_variant	non_coding_transcript_exon_variant
1	19,736,712	G	T	6	2,448	0.002451	0.002451	non_coding_transcript_exon_variant	non_coding_transcript_exon_variant
1	19,768,742	G	C	4	2,448	0.001634	0.001634	missense_variant	missense_variant
1	19,871,010	A	G	22	2,448	0.008987	0.008987	downstream_gene_variant	downstream_gene_variant
1	19,955,000	T	A	566	2,448	0.231209	0.231209	missense_variant	missense_variant
1	19,955,365	C	T	14	2,448	0.005719	0.005719	missense_variant	missense_variant

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