Subset (25)

10k_all_consequences · 20k rows

Split (2)

validation · 10k rows

chrom large_stringclasses 5 values	pos int64 286k 308M	ref large_stringclasses 4 values	alt large_stringclasses 4 values	AC int64 4 2.3k	AN int64 2.45k 2.45k	AF float64 0 0.94	MAF float64 0 0.5	consequence large_stringclasses 11 values	original_consequence large_stringclasses 18 values
1	6,192,348	C	T	16	2,448	0.006536	0.006536	non_coding_transcript_exon_variant	non_coding_transcript_exon_variant
1	6,192,432	T	C	6	2,448	0.002451	0.002451	grouped_splice_region	splice_polypyrimidine_tract_variant
1	6,192,595	C	T	348	2,448	0.142157	0.142157	non_coding_transcript_exon_variant	non_coding_transcript_exon_variant
1	6,192,722	T	C	1,772	2,448	0.723856	0.276144	non_coding_transcript_exon_variant	non_coding_transcript_exon_variant
1	6,192,840	A	G	1,062	2,448	0.433824	0.433824	non_coding_transcript_exon_variant	non_coding_transcript_exon_variant
1	6,224,374	C	T	64	2,448	0.026144	0.026144	5_prime_UTR_variant	5_prime_UTR_variant
1	6,225,155	A	G	4	2,448	0.001634	0.001634	synonymous_variant	synonymous_variant
1	6,226,799	A	G	20	2,448	0.00817	0.00817	intron_variant	intron_variant
1	6,228,332	G	T	126	2,448	0.051471	0.051471	3_prime_UTR_variant	3_prime_UTR_variant
1	6,253,379	T	A	4	2,448	0.001634	0.001634	non_coding_transcript_exon_variant	non_coding_transcript_exon_variant
1	6,265,768	G	C	240	2,448	0.098039	0.098039	grouped_splice_region	splice_polypyrimidine_tract_variant
1	6,365,650	T	A	124	2,448	0.050654	0.050654	synonymous_variant	synonymous_variant
1	6,372,642	C	T	1,308	2,448	0.534314	0.465686	missense_variant	missense_variant
1	6,372,817	C	A	258	2,448	0.105392	0.105392	grouped_start_stop	stop_gained
1	6,477,064	T	C	672	2,448	0.27451	0.27451	downstream_gene_variant	downstream_gene_variant
1	6,477,236	A	G	342	2,448	0.139706	0.139706	downstream_gene_variant	downstream_gene_variant
1	6,479,671	C	T	18	2,448	0.007353	0.007353	missense_variant	missense_variant
1	6,483,230	G	C	214	2,448	0.087418	0.087418	upstream_gene_variant	upstream_gene_variant
1	6,516,096	T	C	2,106	2,448	0.860294	0.139706	5_prime_UTR_variant	5_prime_UTR_variant
1	6,780,833	T	C	210	2,448	0.085784	0.085784	grouped_splice_region	splice_polypyrimidine_tract_variant
1	6,785,138	C	G	1,572	2,448	0.642157	0.357843	missense_variant	missense_variant
1	6,785,950	A	T	1,558	2,448	0.636438	0.363562	intron_variant	intron_variant
1	6,864,112	A	G	270	2,448	0.110294	0.110294	5_prime_UTR_variant	5_prime_UTR_variant
1	6,864,556	C	A	4	2,448	0.001634	0.001634	5_prime_UTR_variant	5_prime_UTR_variant
1	6,871,096	G	A	208	2,448	0.084967	0.084967	grouped_splice_region	splice_donor_5th_base_variant
1	7,012,480	A	T	1,254	2,448	0.512255	0.487745	intergenic_variant	intergenic_variant
1	7,017,694	G	C	28	2,448	0.011438	0.011438	missense_variant	missense_variant
1	7,021,481	G	T	650	2,448	0.265523	0.265523	downstream_gene_variant	downstream_gene_variant
1	7,239,307	G	T	234	2,448	0.095588	0.095588	3_prime_UTR_variant	3_prime_UTR_variant
1	7,242,306	C	T	220	2,448	0.089869	0.089869	grouped_start_stop	stop_gained
1	7,254,005	C	G	6	2,448	0.002451	0.002451	intergenic_variant	intergenic_variant
1	7,256,965	A	T	596	2,448	0.243464	0.243464	intergenic_variant	intergenic_variant
1	7,287,975	G	A	2,012	2,448	0.821895	0.178105	synonymous_variant	synonymous_variant
1	7,288,517	G	C	6	2,448	0.002451	0.002451	3_prime_UTR_variant	3_prime_UTR_variant
1	7,300,377	G	T	938	2,448	0.38317	0.38317	grouped_start_stop	stop_gained
1	7,300,645	A	G	544	2,448	0.222222	0.222222	5_prime_UTR_variant	5_prime_UTR_variant
1	7,301,229	G	T	4	2,448	0.001634	0.001634	non_coding_transcript_exon_variant	non_coding_transcript_exon_variant
1	7,301,408	A	G	736	2,448	0.300654	0.300654	non_coding_transcript_exon_variant	non_coding_transcript_exon_variant
1	7,337,102	A	G	204	2,448	0.083333	0.083333	upstream_gene_variant	upstream_gene_variant
1	7,342,407	C	T	12	2,448	0.004902	0.004902	downstream_gene_variant	downstream_gene_variant
1	7,348,820	C	A	10	2,448	0.004085	0.004085	3_prime_UTR_variant	3_prime_UTR_variant
1	7,401,188	G	A	14	2,448	0.005719	0.005719	synonymous_variant	synonymous_variant
1	7,433,617	C	A	184	2,448	0.075163	0.075163	grouped_start_stop	stop_gained
1	7,497,059	C	T	54	2,448	0.022059	0.022059	non_coding_transcript_exon_variant	non_coding_transcript_exon_variant
1	7,506,460	T	G	616	2,448	0.251634	0.251634	grouped_start_stop	stop_lost
1	7,507,831	C	T	4	2,448	0.001634	0.001634	synonymous_variant	synonymous_variant
1	7,508,555	C	A	114	2,448	0.046569	0.046569	intron_variant	intron_variant
1	7,511,697	G	T	12	2,448	0.004902	0.004902	5_prime_UTR_variant	5_prime_UTR_variant
1	7,780,479	C	T	924	2,448	0.377451	0.377451	missense_variant	missense_variant
1	7,814,151	G	A	32	2,448	0.013072	0.013072	3_prime_UTR_variant	3_prime_UTR_variant
1	7,989,002	C	A	16	2,448	0.006536	0.006536	synonymous_variant	synonymous_variant
1	8,096,365	G	A	4	2,448	0.001634	0.001634	grouped_splice_region	splice_region_variant
1	8,223,092	C	T	12	2,448	0.004902	0.004902	missense_variant	missense_variant
1	8,253,086	C	T	22	2,448	0.008987	0.008987	intergenic_variant	intergenic_variant
1	8,311,519	C	G	366	2,448	0.14951	0.14951	missense_variant	missense_variant
1	8,423,367	T	C	1,934	2,448	0.790033	0.209967	intron_variant	intron_variant
1	8,424,331	C	T	26	2,448	0.010621	0.010621	grouped_splice_region	splice_polypyrimidine_tract_variant
1	8,488,789	C	T	398	2,448	0.162582	0.162582	grouped_splice_region	splice_region_variant
1	8,510,838	G	A	446	2,448	0.18219	0.18219	grouped_splice_region	splice_region_variant
1	8,531,597	T	C	126	2,448	0.051471	0.051471	downstream_gene_variant	downstream_gene_variant
1	8,606,115	C	A	20	2,448	0.00817	0.00817	5_prime_UTR_variant	5_prime_UTR_variant
1	8,607,341	G	A	112	2,448	0.045752	0.045752	5_prime_UTR_variant	5_prime_UTR_variant
1	8,607,832	T	G	1,082	2,448	0.441993	0.441993	upstream_gene_variant	upstream_gene_variant
1	8,609,340	A	C	10	2,448	0.004085	0.004085	intergenic_variant	intergenic_variant
1	8,612,403	G	T	80	2,448	0.03268	0.03268	missense_variant	missense_variant
1	8,638,084	C	A	1,274	2,448	0.520425	0.479575	grouped_start_stop	stop_gained
1	8,725,860	G	A	942	2,448	0.384804	0.384804	non_coding_transcript_exon_variant	non_coding_transcript_exon_variant
1	8,726,022	G	A	10	2,448	0.004085	0.004085	non_coding_transcript_exon_variant	non_coding_transcript_exon_variant
1	8,726,049	C	T	10	2,448	0.004085	0.004085	non_coding_transcript_exon_variant	non_coding_transcript_exon_variant
1	8,726,062	G	A	10	2,448	0.004085	0.004085	non_coding_transcript_exon_variant	non_coding_transcript_exon_variant
1	8,726,138	T	C	1,046	2,448	0.427288	0.427288	non_coding_transcript_exon_variant	non_coding_transcript_exon_variant
1	8,727,672	C	T	676	2,448	0.276144	0.276144	grouped_start_stop	stop_gained
1	8,729,704	G	T	456	2,448	0.186275	0.186275	grouped_start_stop	start_lost
1	8,917,546	G	A	266	2,448	0.10866	0.10866	grouped_start_stop	start_lost
1	8,949,770	C	T	116	2,448	0.047386	0.047386	upstream_gene_variant	upstream_gene_variant
1	8,950,775	C	T	144	2,448	0.058824	0.058824	downstream_gene_variant	downstream_gene_variant
1	9,047,512	A	C	1,284	2,448	0.52451	0.47549	non_coding_transcript_exon_variant	non_coding_transcript_exon_variant
1	9,047,547	C	T	14	2,448	0.005719	0.005719	non_coding_transcript_exon_variant	non_coding_transcript_exon_variant
1	9,047,704	C	A	6	2,448	0.002451	0.002451	non_coding_transcript_exon_variant	non_coding_transcript_exon_variant
1	9,047,813	C	A	286	2,448	0.11683	0.11683	non_coding_transcript_exon_variant	non_coding_transcript_exon_variant
1	9,048,140	A	T	40	2,448	0.01634	0.01634	non_coding_transcript_exon_variant	non_coding_transcript_exon_variant
1	9,056,717	T	C	4	2,448	0.001634	0.001634	grouped_start_stop	start_lost
1	9,279,832	C	T	1,634	2,448	0.667484	0.332516	synonymous_variant	synonymous_variant
1	9,361,206	C	T	4	2,448	0.001634	0.001634	intergenic_variant	intergenic_variant
1	9,427,048	A	G	1,160	2,448	0.473856	0.473856	synonymous_variant	synonymous_variant
1	9,427,654	G	A	364	2,448	0.148693	0.148693	synonymous_variant	synonymous_variant
1	9,428,128	A	G	46	2,448	0.018791	0.018791	3_prime_UTR_variant	3_prime_UTR_variant
1	9,441,914	T	A	20	2,448	0.00817	0.00817	intergenic_variant	intergenic_variant
1	9,516,966	T	C	1,640	2,448	0.669935	0.330065	grouped_splice_region	splice_polypyrimidine_tract_variant
1	9,529,763	A	G	1,566	2,448	0.639706	0.360294	intron_variant	intron_variant
1	9,531,331	G	A	340	2,448	0.138889	0.138889	5_prime_UTR_variant	5_prime_UTR_variant
1	9,575,213	G	T	60	2,448	0.02451	0.02451	missense_variant	missense_variant
1	9,963,624	G	A	268	2,448	0.109477	0.109477	downstream_gene_variant	downstream_gene_variant
1	10,044,016	C	T	86	2,448	0.035131	0.035131	grouped_start_stop	stop_gained
1	10,045,185	G	A	1,312	2,448	0.535948	0.464052	3_prime_UTR_variant	3_prime_UTR_variant
1	10,045,188	A	G	4	2,448	0.001634	0.001634	3_prime_UTR_variant	3_prime_UTR_variant
1	10,193,615	G	A	442	2,448	0.180556	0.180556	5_prime_UTR_variant	5_prime_UTR_variant
1	10,196,328	C	A	718	2,448	0.293301	0.293301	upstream_gene_variant	upstream_gene_variant
1	10,673,677	A	G	582	2,448	0.237745	0.237745	grouped_splice_region	splice_donor_variant
1	10,679,505	C	G	1,132	2,448	0.462418	0.462418	missense_variant	missense_variant

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