pdb_code stringlengths 4 4 | release_date stringdate 1991-10-15 00:00:00 2026-01-28 00:00:00 | classification stringclasses 1
value | chains stringlengths 61 5.01k | formula_weight float64 387 271k | symmetry stringclasses 66
values | crystal_structure(a|b|c|alpha|beta|gamma) stringlengths 5 45 | exptl_method stringclasses 6
values | synthesis_comment stringclasses 73
values | authors stringlengths 7 521 ⌀ | publication stringlengths 15 254 | publication_ref(doi|pubmed|csd|issn|astm) stringlengths 4 62 | publication_country stringclasses 9
values | subtitle stringlengths 6 213 | tags stringlengths 9 287 | sequence_related_designs_above_50_bits stringlengths 8 1.39k ⌀ | sequence_related_natural_proteins_above_50_bits stringlengths 8 115k ⌀ | structure_related_designs_above_95_lddt stringlengths 7 1.13k ⌀ | structure_related_natural_above_95_lddt stringclasses 247
values | highest_sequence_related_design stringlengths 7 10 ⌀ | highest_sequence_related_natural_protein stringlengths 8 10 ⌀ | highest_structure_related_design stringlengths 7 18 ⌀ | highest_structure_related_natural_protein stringlengths 7 18 ⌀ | cath_full stringlengths 9 3.45k ⌀ | data_curation_comments stringclasses 3
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
5byo | 2015-12-16 | other | id:A,B;type:U;source:unknown;length:383;seq_nat:GSSMASGISVEELLKLAKAAYYSGTTVEEAYKLALKLGISVEELLKLAEAAYYSGTTVEEAYKLALKLGISVEELLKLAKAAYYSGTTVEEAYKLALKLGISVEELLKLAKAAYYSGTTVEEAYKLALKLGISVEELLKLAEAAYYSGTTVEEAYKLALKLGISVEELLKLAKAAYYSGTTVEEAYKLALKLGISVEELLKLAKAAYYSGTTVEEAYKLALKLGISVEELLKLAEAAYYSGTTVEEAYKLALKLGISVEELLKLAKAAYYSG... | 40,902.375 | C 1 2 1 | 95.414|119.365|76.339|90.000|110.930|90.000 | X-RAY DIFFRACTION | Rosetta designed | L. Doyle;J. Hallinan;J. Bolduc;F. Parmeggiani;D. Baker;B.L. Stoddard;P. Bradley | "Rational design of alpha-helical tandem repeat proteins with closed architectures", Nature, 528, 585-588 | 10.1038/nature16191|26675735|0006|1476-4687|NATUAS | UK | Computationally designed left-handed alpha/alpha toroid with 12 repeats | toroid;alpha helix;left-handed;computationally designed;rosetta;de novo protein | 4yxz(530);4yxy(187);9gvf(130);8s6p(130);9h3c(124);8c3w(108) | null | null | null | 4yxz(530) | null | 4yxz(0.8629999757) | 4cj9(0.4535999894) | 1.20.5.420;1.10.10.630;1.20.120.1920;1.10.8.60;1.10.8.1000;1.10.8.10 | null |
5c39 | 2015-10-21 | other | id:A,B;type:D;source:synthetic construct;length:51;seq_nat:DYLRELYKLEQQAMKLYREASEKARNPEKKSVLQKILEDEEKHIEWLETIN;seq_unnat:DYLRELYKLEQQAMKLYREASEKARNPEKKSVLQKILEDEEKHIEWLETIN | 6,289.149 | P 21 21 21 | 41.162|52.465|52.547|90.000|90.000|90.000 | X-RAY DIFFRACTION | null | T.L. Olson;E. Espiritu;S. Edwardraja;C.R. Simmons;J.C. Williams;G. Ghirlanda;J.P. Allen | "Design of dinuclear manganese cofactors for bacterial reaction centers", Biochim.Biophys.Acta, 1857, 539-547 | 10.1016/j.bbabio.2015.09.003|26392146|0113|0006-3002|BBACAQ | NE | Crystal structure of a designed mn binding peptide | mn4ca cluster;de novo protein;manganese cofactors | 5vjs(66);5vjt(66);8d9o(66);8d9p(66);5vju(63) | 1mft(99);1u7m(99);1u7j(80);2hz8(66);2lfd(63);2lff(63) | null | 1mft(0.9786000252) | 5vjs(66) | 1mft(99) | 5vju(0.9149000049) | 1mft(0.9786000252) | 1.10.287.110;1.10.287.600;1.20.5.420;6.10.140.630;1.10.287.660;1.10.287.3810;4.10.810.10;1.10.12.10;6.10.250.2850;6.10.140.790;6.10.140.480;1.10.287.690;1.20.5.4010;1.10.287.140;6.10.140.360;6.10.250.890;1.10.286.70;1.10.287.550;6.10.250.2860;6.10.140.1480;4.10.860.20;1.10.287.230;6.10.250.1010;6.10.280.110;6.10.250.31... | null |
5chb | 2015-07-22 | other | id:A,B,C;type:U;source:unknown;length:88;seq_nat:GSHMFTGLNTPSGVAVDSAGTVYVTDHGNNRVVKLAAGSNTQTVLPFTGLNTPHGVAVDSAGTVYVTDHGNNRVVKLAAGSNTQTVL;seq_unnat:GSHMFTGLNTPSGVAVDSAGTVYVTDHGNNRVVKLAAGSNTQTVLPFTGLNTPHGVAVDSAGTVYVTDHGNNRVVKLAAGSNTQTVL | 8,814.698 | P 31 2 1 | 61.200|61.200|109.558|90.000|90.000|120.000 | X-RAY DIFFRACTION | null | A.R.D. Voet;H. Noguchi;C. Addy;K.Y.J. Zhang;J.R.H. Tame | "Biomineralization of a Cadmium Chloride Nanocrystal by a Designed Symmetrical Protein", Angew.Chem.Int.Ed.Engl., 54, 9857-9860 | 10.1002/anie.201503575|26136355|0179|1521-3773|ACIEAY | GE | Crystal structure of nvpizza2-s16h58 coordinating a cdcl2 nanocrystal | biomineralization;computational protein design;metalloproteins;nano-crystal;symmetrical protein;cadmium;de novo protein | 4zcn(172);5f53(172);5i1z(171);5i1y(171);6rej(168);6rek(168);6rem(168);6rel(168);6i37(167);6reh(164);6qsf(164);6rei(164);7ov7(164);6qsg(164);6qsh(164);6reg(164);6qsd(164);6qse(164);6f0t(163);6f0s(162);7zq2(161);7zqg(161);7zcj(161);6reo(160);6rlh(160);6rli(160);6ren(160);6i38(159);6f0q(159);7zpz(159);6i3b(158);6i39(158);... | 1rwi(123);1rwl(123) | 5f53(0.9743000269);3ww8(0.9603000283);5i1z(0.9718999863);6rel(0.9815999866);5i1y(0.9588000178);7ov7(0.9584000111);6reg(0.9624000192);3wwa(0.9623000026);6reh(0.9613000154);7zpw(0.9631000161);6rei(0.9585000277);6qsg(0.9595999718);6rem(0.9592999816);3ww9(0.9535999894);6rej(0.9526000023);6ren(0.956099987);6rli(0.953700006)... | null | 4zcn(172) | 1rwi(123) | 6rel(0.9815999866) | 1rwi(0.9228000045) | 2.40.10.500;2.20.25.400;2.40.128.190;2.40.10.360;2.20.25.510;2.20.25.650;2.20.25.10;2.30.30.660 | null |
5cw9 | 2015-09-23 | other | id:A;type:D;source:synthetic construct;length:147;seq_nat:MEMDIRFRGDDPEAYYKALREMIRQARKFAGTVTVTLIIRFRGDDLEALEKALKEMIRQARKFAGTVTYTLDGNDLEIRITGVPPQVILELVKEAIRLAKEFNITVTVELVIRITGVPEQVRKELAKEAERLAKEFNITVTYTIRL;seq_unnat:MEMDIRFRGDDPEAYYKALREMIRQARKFAGTVTVTLIIRFRGDDLEALEKALKEMIRQARKFAGTVTYTLDGNDLEIRITGVPPQVILELVKEAIRLAKEFNIT... | 16,838.682 | I 41 2 2 | 80.563|80.563|222.683|90.000|90.000|90.000 | X-RAY DIFFRACTION | null | I.C. King;J. Gleixner;L. Doyle;A. Kuzin;J.F. Hunt;R. Xiao;G.T. Montelione;B.L. Stoddard;F. DiMaio;D. Baker | "Precise assembly of complex beta sheet topologies from de novo designed building blocks", Elife, 4 | 10.7554/eLife.11012|26650357||2050-084X| | US | Crystal structure of de novo designed ferredoxin-ferredoxin domain insertion protein | domain insertion;de novo protein;ferredoxin;designed;de novo | 2mtl(127);2kl8(126);4ky3(126);4kyz(126);4nez(126);4ney(126);4pww(102);9qud(98);9qui(98);9quc(98);6zv9(98);6wxp(98);6wxo(98);9qul(95);9quo(95);4rjv(89);9qup(55) | 4hhu(131) | null | null | 2mtl(127) | 4hhu(131) | 4rjv(0.6893000007) | 4hhu(0.6568999887) | 3.30.70.920;3.30.70.240;3.30.70.1200;3.30.70.790;3.30.70.1450;3.30.70.1890;3.30.70.260;3.30.70.1550;3.30.70.80;3.30.70.1070;3.30.70.330;3.30.70.2730;3.30.70.120;3.30.70.1150 | null |
5cwb | 2015-12-16 | other | id:A;type:D;source:synthetic construct;length:213;seq_nat:MSYEDECEEKARRVAEKVERLKRSGTSEDEIAEEVAREISEVIRTLKESGSSYEVICECVARIVAEIVEALKRSGTSEDEIAEIVARVISEVIRTLKESGSSYEVICECVARIVAEIVEALKRSGTSEDEIAEIVARVISEVIRTLKESGSSYEVIKECVQRIVEEIVEALKRSGTSEDEINEIVRRVKSEVERTLKESGSSWLEHHHHHH;seq_unnat:MSYEDECEEKARRVAEKVERLKRSGTSEDEIAEEVAREIS... | 23,836.801 | P 21 21 21 | 43.810|56.230|66.370|90.000|90.000|90.000 | X-RAY DIFFRACTION | null | T.J. Brunette;F. Parmeggiani;P.S. Huang;G. Bhabha;D.C. Ekiert;S.E. Tsutakawa;G.L. Hura;J.A. Tainer;D. Baker | "Exploring the repeat protein universe through computational protein design", Nature, 528, 580-584 | 10.1038/nature16162|26675729|0006|1476-4687|NATUAS | UK | Crystal structure of de novo designed helical repeat protein dhr4 | de novo protein;helical repeat protein | 8cwy(318);7mwr(313);8cws(310);6vfi(282) | 9drl(258) | null | null | 8cwy(318) | 9drl(258) | 7mwr(0.9193999767) | 3jap(0.4648000002) | 1.20.120.420;1.20.1280.280;1.10.10.1740;1.20.58.1110;1.20.1280.130;1.10.246.120;1.10.10.2420;1.10.10.1350;1.10.150.510;1.10.10.1050;1.20.58.1440;1.10.287.750;1.20.58.420;1.20.120.1070;1.10.340.60;1.20.58.1080;1.20.1310.10;1.20.58.2070;1.20.58.1330;1.10.1240.20;1.10.357.10;1.20.58.670;1.10.10.400;1.10.1240.10 | null |
5cwc | 2015-12-16 | other | id:A;type:D;source:synthetic construct;length:212;seq_nat:MSSEKEELRERLVKICVENAKRKGDDTEEAREAAREAFELVREAAERAGIDSSEVLELAIRLIKECVENAQREGYDISEACRAAAEAFKRVAEAAKRAGITSSEVLELAIRLIKECVENAQREGYDISEACRAAAEAFKRVAEAAKRAGITSSETLKRAIEEIRKRVEEAQREGNDISEACRQAAEEFRKKAEELKRRGDGWLEHHHHHH;seq_unnat:MSSEKEELRERLVKICVENAKRKGDDTEEAREAAREAFELV... | 23,759.646 | P 21 2 21 | 47.320|51.140|72.860|90.000|90.000|90.000 | X-RAY DIFFRACTION | null | T.J. Brunette;F. Parmeggiani;P.S. Huang;G. Bhabha;D.C. Ekiert;S.E. Tsutakawa;G.L. Hura;J.A. Tainer;D. Baker | "Exploring the repeat protein universe through computational protein design", Nature, 528, 580-584 | 10.1038/nature16162|26675729|0006|1476-4687|NATUAS | UK | Crystal structure of de novo designed helical repeat protein dhr5 | de novo protein;helical repeat protein | 5cwg(355);7mwr(71);8cwy(64);8cws(64);5cwp(61) | 9drl(82) | 5cwg(0.9862999916) | null | 5cwg(355) | 9drl(82) | 5cwg(0.9862999916) | 3wvo(0.3592999876) | 1.10.8.710;1.20.81.20;1.20.930.10;1.10.8.740;1.10.8.330;1.10.8.210;1.20.120.470;1.20.1270.430;1.10.246.200;1.10.1740.10;1.10.8.380;1.10.8.1060;1.10.1900.10;1.10.8.60;1.20.1270.20;1.10.8.1170;1.20.1270.110;1.20.120.1320 | null |
5cwd | 2015-12-16 | other | id:A;type:D;source:synthetic construct;length:181;seq_nat:MSTKEDARSTCEKAARKAAESNDEEVAKQAAKDCLEVAKQAGMPTKEAARSFCEAAARAAAESNDEEVAKIAAKACLEVAKQAGMPTKEAARSFCEAAARAAAESNDEEVAKIAAKACLEVAKQAGMPTKEAARSFCEAAKRAAKESNDEEVEKIAKKACKEVAKQAGMPWLEHHHHHH;seq_unnat:MSTKEDARSTCEKAARKAAESNDEEVAKQAAKDCLEVAKQAGMPTKEAARSFCEAAARAAAESNDEEVAKIA... | 19,102.574 | C 1 2 1 | 84.881|29.449|63.432|90.000|123.510|90.000 | X-RAY DIFFRACTION | null | T.J. Brunette;F. Parmeggiani;P.S. Huang;G. Bhabha;D.C. Ekiert;S.E. Tsutakawa;G.L. Hura;J.A. Tainer;D. Baker | "Exploring the repeat protein universe through computational protein design", Nature, 528, 580-584 | 10.1038/nature16162|26675729|0006|1476-4687|NATUAS | UK | Crystal structure of de novo designed helical repeat protein dhr7 | de novo protein;helical repeat protein | null | null | null | null | 8gaa(40) | null | 7udk(0.5889000297) | 1ug3(0.4754999876) | 1.10.10.10;1.10.10.2400;1.10.220.10;1.10.132.110;1.10.1200.30;1.10.246.170;1.20.58.770;1.10.1240.20;1.10.10.2420;1.20.58.1280;1.10.10.180;1.10.1240.30;1.10.220.100;1.10.110.10;1.10.1240.10 | null |
5cwf | 2015-12-16 | other | id:A,B,C,D;type:D;source:synthetic construct;length:193;seq_nat:MSDEMKKVMEALKKAVELAKKNNDDEVAREIERAAKEIVEALRENNSDEMAKVMLALAKAVLLAAKNNDDEVAREIARAAAEIVEALRENNSDEMAKVMLALAKAVLLAAKNNDDEVAREIARAAAEIVEALRENNSDEMAKKMLELAKRVLDAAKNNDDETAREIARQAAEEVEADRENNSWLEHHHHHH;seq_unnat:MSDEMKKVMEALKKAVELAKKNNDDEVAREIERAAKEIVEALRENNSDEMAKVM... | 21,375.09 | P 21 21 2 | 75.690|76.360|133.140|90.000|90.000|90.000 | X-RAY DIFFRACTION | null | T.J. Brunette;F. Parmeggiani;P.S. Huang;G. Bhabha;D.C. Ekiert;S.E. Tsutakawa;G.L. Hura;J.A. Tainer;D. Baker | "Exploring the repeat protein universe through computational protein design", Nature, 528, 580-584 | 10.1038/nature16162|26675729|0006|1476-4687|NATUAS | UK | Crystal structure of de novo designed helical repeat protein dhr8 | de novo protein;helical repeat protein | null | 9k7u(52) | null | null | 5cwf(0) | 9k7u(52) | 8flx(0.5684000254) | 3qg1(0.4034000039) | 1.20.1440.140;1.20.930.10;1.20.5.420;1.20.1270.20;1.20.930.20;1.20.1270.430;1.10.1900.10;1.20.1270.90;1.10.8.950;1.20.81.20;1.10.8.210;1.20.58.80;1.20.120.1510;1.20.1270.110;1.20.1270.350;1.20.1270.10;1.10.287.410;1.20.1270.150;1.10.8.1170 | null |
5cwg | 2015-12-16 | other | id:A;type:D;source:synthetic construct;length:212;seq_nat:MSSEKEELRERLVKIVVENAKRKGDDTEEAREAAREAFELVREAAERAGIDSSEVLELAIRLIKEVVENAQREGYDISEAARAAAEAFKRVAEAAKRAGITSSEVLELAIRLIKEVVENAQREGYDISEAARAAAEAFKRVAEAAKRAGITSSETLKRAIEEIRKRVEEAQREGNDISEAARQAAEEFRKKAEELKRRGDGWLEHHHHHH;seq_unnat:MSSEKEELRERLVKIVVENAKRKGDDTEEAREAAREAFELV... | 23,651.416 | P 21 2 21 | 47.590|50.560|72.430|90.000|90.000|90.000 | X-RAY DIFFRACTION | null | T.J. Brunette;F. Parmeggiani;P.S. Huang;G. Bhabha;D.C. Ekiert;S.E. Tsutakawa;G.L. Hura;J.A. Tainer;D. Baker | "Exploring the repeat protein universe through computational protein design", Nature, 528, 580-584 | 10.1038/nature16162|26675729|0006|1476-4687|NATUAS | UK | Crystal structure of de novo designed helical repeat protein dhr10 | de novo protein;helical repeat protein | 5cwc(360);8cwy(72);8cws(72);7mwr(71);5cwp(63) | 9drl(84) | 5cwc(0.9847999811) | null | 5cwc(360) | 9drl(84) | 5cwc(0.9847999811) | 1vol(0.3673000038) | 1.10.8.710;1.10.8.210;1.20.930.10;1.10.8.330;1.10.8.740;1.10.1740.10;1.10.8.380;1.10.8.1060;1.10.1740.100;1.10.1900.10;1.10.8.60;1.20.1270.150;1.10.12.40;1.10.8.1170;1.10.8.1220;1.10.8.950;1.20.120.1510;1.10.1740.130 | null |
5cwh | 2015-12-16 | other | id:A;type:D;source:synthetic construct;length:174;seq_nat:MDSEEVNERVKQLAEKAKEATDKEEVIEIVKELAELAKQSTDSELVNEIVKQLAEVAKEATDKELVIYIVKILAELAKQSTDSELVNEIVKQLAEVAKEATDKELVIYIVKILAELAKQSTDSELVNEIVKQLEEVAKEATDKELVEHIEKILEELKKQSTDGWLEHHHHHH;seq_unnat:MDSEEVNERVKQLAEKAKEATDKEEVIEIVKELAELAKQSTDSELVNEIVKQLAEVAKEATDKELVIYIVKILAELAKQ... | 19,582.172 | C 2 2 21 | 40.960|104.390|90.230|90.000|90.000|90.000 | X-RAY DIFFRACTION | null | T.J. Brunette;F. Parmeggiani;P.S. Huang;G. Bhabha;D.C. Ekiert;S.E. Tsutakawa;G.L. Hura;J.A. Tainer;D. Baker | "Exploring the repeat protein universe through computational protein design", Nature, 528, 580-584 | 10.1038/nature16162|26675729|0006|1476-4687|NATUAS | UK | Crystal structure of de novo designed helical repeat protein dhr14 | de novo protein;helical repeat protein | 8fbk(184);5cwn(74) | null | null | null | 8fbk(184) | null | 8fbk(0.8352000117) | 3bct(0.6243000031) | 1.25.40.290;1.20.58.2070;1.20.930.10;1.25.40.440;1.10.10.2400;1.25.40.40;1.10.220.10;1.20.58.1280;1.20.1160.20;6.10.140.1030;1.20.970.10;1.25.40.970;1.25.40.10;1.10.220.100;1.25.40.850 | null |
5cwi | 2015-12-16 | other | id:A;type:D;source:synthetic construct;length:253;seq_nat:MDIEKLCKKAESEAREARSKAEELRQRHPDSQAARDAQKLASQAEEAVKLACELAQEHPNADIAKLCIKAASEAAEAASKAAELAQRHPDSQAARDAIKLASQAAEAVKLACELAQEHPNADIAKLCIKAASEAAEAASKAAELAQRHPDSQAARDAIKLASQAAEAVKLACELAQEHPNADIAKKCIKAASEAAEEASKAAEEAQRHPDSQKARDEIKEASQKAEEVKERCERAQEHPNAWLEHHHHHH;seq_unnat:M... | 27,044.129 | P 1 | 24.920|43.650|48.750|116.560|90.720|102.190 | X-RAY DIFFRACTION | null | T.J. Brunette;F. Parmeggiani;P.S. Huang;G. Bhabha;D.C. Ekiert;S.E. Tsutakawa;G.L. Hura;J.A. Tainer;D. Baker | "Exploring the repeat protein universe through computational protein design", Nature, 528, 580-584 | 10.1038/nature16162|26675729|0006|1476-4687|NATUAS | UK | Crystal structure of de novo designed helical repeat protein dhr18 | de novo protein;helical repeat protein | 5cwn(64) | null | null | null | 5cwn(64) | null | 5cwp(0.5498999953) | 2rld(0.3962000012) | 1.20.5.420;1.10.246.20;1.20.120.870;1.20.1270.410;1.20.1410.10;1.20.1270.20;1.20.930.20;1.20.120.470;1.20.120.30;1.20.1270.430;1.20.1270.50;1.20.1440.210;1.20.1270.90;1.10.287.2500;1.20.58.200;1.20.81.20;1.20.1440.60;1.10.287.1060;1.20.1270.350;1.20.120.1320;1.20.120.550;6.10.280.160;1.10.8.1010;1.20.120.230;1.20.120.1... | null |
5cwj | 2015-12-16 | other | id:A;type:D;source:synthetic construct;length:173;seq_nat:MDSEEEQERIRRILKEARKSGTEESLRQAIEDVAQLAKKSQDSEVLEEAIRVILRIAKESGSEEALRQAIRAVAEIAKEAQDSEVLEEAIRVILRIAKESGSEEALRQAIRAVAEIAKEAQDPRVLEEAIRVIRQIAEESGSEEARRQAERAEEEIRRRAQGWLEHHHHHH;seq_unnat:MDSEEEQERIRRILKEARKSGTEESLRQAIEDVAQLAKKSQDSEVLEEAIRVILRIAKESGSEEALRQAIRAVAEIAKEA... | 19,596.873 | I 41 | 80.890|80.890|46.710|90.000|90.000|90.000 | X-RAY DIFFRACTION | null | T.J. Brunette;F. Parmeggiani;P.S. Huang;G. Bhabha;D.C. Ekiert;S.E. Tsutakawa;G.L. Hura;J.A. Tainer;D. Baker | "Exploring the repeat protein universe through computational protein design", Nature, 528, 580-584 | 10.1038/nature16162|26675729|0006|1476-4687|NATUAS | UK | Crystal structure of de novo designed helical repeat protein dhr49 | de novo protein;helical repeat protein | 6xh5(219);9cc4(100);5cwm(98);9d92(91);8fbk(63) | null | null | null | 6xh5(219) | null | 6xh5(0.8955000043) | 3gs3(0.5630000234) | 1.25.40.290;1.20.58.2070;1.20.930.10;1.20.1160.20;1.25.40.40;1.20.1280.150;1.10.220.10;1.20.58.1280;1.25.40.60;1.20.120.1070;1.25.40.970;1.10.220.100;1.25.40.10;1.10.287.1130;1.20.1440.50;1.20.1050.10;1.25.40.850 | null |
5cwk | 2015-12-16 | other | id:A;type:D;source:synthetic construct;length:185;seq_nat:MSNDEKEKLKELLKRAEELAKSPDPEDLKEAVRLAEEVVRERPGSNLAKKALEIILRAAEELAKLPDPEALKEAVKAAEKVVREQPGSNLAKKALEIILRAAEELAKLPDPEALKEAVKAAEKVVREQPGSELAKKALEIIERAAEELKKSPDPEAQKEAKKAEQKVREERPGGWLEHHHHHH;seq_unnat:MSNDEKEKLKELLKRAEELAKSPDPEDLKEAVRLAEEVVRERPGSNLAKKALEIILRAAEELAKLPDP... | 20,510.541 | C 1 2 1 | 127.380|24.340|60.440|90.000|116.860|90.000 | X-RAY DIFFRACTION | null | T.J. Brunette;F. Parmeggiani;P.S. Huang;G. Bhabha;D.C. Ekiert;S.E. Tsutakawa;G.L. Hura;J.A. Tainer;D. Baker | "Exploring the repeat protein universe through computational protein design", Nature, 528, 580-584 | 10.1038/nature16162|26675729|0006|1476-4687|NATUAS | UK | Crystal structure of de novo designed helical repeat protein dhr53 | de novo protein;helical repeat protein | 6xt4(239);7mwq(218);7mwr(213);6xns(128) | 9drl(147) | null | null | 6xt4(239) | 9drl(147) | 6xt4(0.9133999944) | 4wng(0.5507000089) | 1.25.40.290;1.20.58.2070;1.25.40.440;1.20.930.10;1.10.10.2400;1.25.40.40;1.10.220.10;1.20.58.1280;6.10.140.1030;1.25.40.970;1.25.40.10;1.10.220.100;1.10.287.1130;1.10.1240.70;1.25.40.850 | null |
5cwl | 2015-12-16 | other | id:A,B;type:D;source:synthetic construct;length:185;seq_nat:MTTEDERRELEKVARKAIEAAREGNTDEVREQLQRALEIARESGTTEAVKLALEVVARVAIEAARRGNTDAVREALEVALEIARESGTTEAVKLALEVVARVAIEAARRGNTDAVREALEVALEIARESGTEEAVRLALEVVKRVSDEAKKQGNEDAVKEAEEVRKKIEEESGGWLEHHHHHH;seq_unnat:MTTEDERRELEKVARKAIEAAREGNTDEVREQLQRALEIARESGTTEAVKLALEVVARVAIEAARR... | 20,301.639 | P 21 21 21 | 55.250|69.100|82.630|90.000|90.000|90.000 | X-RAY DIFFRACTION | null | T.J. Brunette;F. Parmeggiani;P.S. Huang;G. Bhabha;D.C. Ekiert;S.E. Tsutakawa;G.L. Hura;J.A. Tainer;D. Baker | "Exploring the repeat protein universe through computational protein design", Nature, 528, 580-584 | 10.1038/nature16162|26675729|0006|1476-4687|NATUAS | UK | Crystal structure of de novo designed helical repeat protein dhr54 | de novo protein;helical repeat protein | 8fin(213);8fiq(207);5cwo(94);6xh5(81);4gmr(68);8fbi(65);4gpm(64);5hry(58);7mwq(57) | null | null | null | 8fin(213) | null | 8fin(0.8457999825) | 3q15(0.5252000093) | 1.20.930.10;1.20.58.740;1.20.1280.280;1.20.58.1280;1.20.58.180;1.25.40.420;1.20.1050.10;1.20.1440.50;1.20.58.1150;1.10.10.1350;1.20.58.930;1.10.220.100;1.20.58.1440;1.20.58.200;1.25.40.610;1.10.287.750;1.10.10.2400;1.20.58.80;1.20.58.1080;1.20.58.1460;1.20.1310.10;1.20.1280.300;1.20.58.2070;1.10.220.10;1.20.58.770;1.10... | null |
5cwm | 2015-12-16 | other | id:A;type:D;source:synthetic construct;length:241;seq_nat:MDPEDELKRVEKLVKEAEELLRQAKEKGSEEDLEKALRTAEEAAREAKKVLEQAEKEGDPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVARRAVELVKRVAELLERIARESGSEEAKERAERVREEARELQERVKELREREGGWLEHHHHHH;seq_unnat:MDPEDELKRVEK... | 27,233.951 | P 65 | 98.280|98.280|48.570|90.000|90.000|120.000 | X-RAY DIFFRACTION | null | T.J. Brunette;F. Parmeggiani;P.S. Huang;G. Bhabha;D.C. Ekiert;S.E. Tsutakawa;G.L. Hura;J.A. Tainer;D. Baker | "Exploring the repeat protein universe through computational protein design", Nature, 528, 580-584 | 10.1038/nature16162|26675729|0006|1476-4687|NATUAS | UK | Crystal structure of de novo designed helical repeat protein dhr64 | de novo protein;helical repeat protein | 6e9z(324);6e9t(323);6e9y(311);6e9v(294);5cwn(149);6xr1(148);6xns(136);6xr2(122);8e0n(117);9dze(114);8flx(111);8f6q(110);5cwj(99);8e0l(94);8e12(91);8fit(91);8e0o(89);8f6r(85);8e0m(83);5cwq(78);8tm9(76);8tlp(76);7rkc(74);8gaq(67);5cwh(51) | null | null | null | 6e9z(324) | null | 6e9v(0.9453999996) | 3pja(0.4736000001) | 1.10.287.1520;1.20.930.10;1.20.120.420;1.20.58.740;1.10.287.660;1.20.58.1280;1.25.40.410;1.20.120.870;1.20.120.360;1.25.40.90;6.10.140.1970;1.20.1050.10;1.10.287.3280;1.25.40.240;1.20.58.1150;1.10.287.310;1.20.58.1800;1.25.40.70;1.20.20.10;1.20.1310.30;1.10.287.1890;1.20.58.2150;1.20.58.1320;1.20.1660.10;1.20.870.10;1.... | null |
5cwn | 2015-12-16 | other | id:A;type:D;source:synthetic construct;length:213;seq_nat:MDPEEILERAKESLERAREASERGDEEEFRKAAEKALELAKRLVEQAKKEGDPELVLEAAKVALRVAELAAKNGDKEVFKKAAESALEVAKRLVEVASKEGDPELVLEAAKVALRVAELAAKNGDKEVFKKAAESALEVAKRLVEVASKEGDPELVEEAAKVAEEVRKLAKKQGDEEVYEKARETAREVKEELKRVREEKGGWLEHHHHHH;seq_unnat:MDPEEILERAKESLERAREASERGDEEEFRKAAEKALELA... | 23,614.76 | P 21 21 21 | 23.270|82.910|103.300|90.000|90.000|90.000 | X-RAY DIFFRACTION | null | T.J. Brunette;F. Parmeggiani;P.S. Huang;G. Bhabha;D.C. Ekiert;S.E. Tsutakawa;G.L. Hura;J.A. Tainer;D. Baker | "Exploring the repeat protein universe through computational protein design", Nature, 528, 580-584 | 10.1038/nature16162|26675729|0006|1476-4687|NATUAS | UK | Crystal structure of de novo designed helical repeat protein dhr71 | de novo protein;helical repeat protein | 8f6q(262);5cwm(141);5cwh(83);5cwq(81);9dze(72);7rkc(70);8tm9(69);8tlp(69);5cwi(55) | null | null | null | 8f6q(262) | null | 8f6q(0.8819000125) | 2v6y(0.5611000061) | 1.20.58.820;1.20.930.10;1.20.120.420;1.20.58.740;1.20.58.1280;1.20.58.180;1.20.58.1110;1.20.1050.10;1.20.58.1150;1.20.58.1360;1.20.58.930;1.20.58.1790;1.10.220.100;1.20.58.200;1.25.40.610;1.20.1440.60;1.10.287.750;1.20.58.1200;1.20.58.80;1.20.58.600;1.20.58.220;1.20.58.1080;1.20.58.1460;1.25.40.170;1.20.58.670;1.20.58.... | null |
5cwo | 2015-12-16 | other | id:A,B;type:D;source:synthetic construct;length:233;seq_nat:MNPELEEWIRRAKEVAKEVEKVAQRAEEEGNPDLRDSAKELRRAVEEAIEEAKKQGNPELVEWVARAAKVAAEVIKVAIQAEKEGNRDLFRAALELVRAVIEAIEEAVKQGNPELVEWVARAAKVAAEVIKVAIQAEKEGNRDLFRAALELVRAVIEAIEEAVKQGNPELVERVARLAKKAAELIKRAIRAEKEGNRDERREALERVREVIERIEELVRQGGWLEHHHHHH;seq_unnat:MNPELEEWIRRAKEVAKE... | 26,311.984 | P 21 21 21 | 62.540|66.300|102.220|90.000|90.000|90.000 | X-RAY DIFFRACTION | null | T.J. Brunette;F. Parmeggiani;P.S. Huang;G. Bhabha;D.C. Ekiert;S.E. Tsutakawa;G.L. Hura;J.A. Tainer;D. Baker | "Exploring the repeat protein universe through computational protein design", Nature, 528, 580-584 | 10.1038/nature16162|26675729|0006|1476-4687|NATUAS | UK | Crystal structure of de novo designed helical repeat protein dhr76 | de novo protein;helical repeat protein | 8fbi(319);7tcd(130);7udj(100);5cwl(84);7ue2(66);8e0n(63);8e1e(57);8e55(55);8fin(52) | null | null | null | 8fbi(319) | 9k7u(48) | 8fbi(0.7828000188) | 4m70(0.4138999879) | 1.20.120.160;1.20.5.420;1.10.246.20;1.20.1270.20;1.20.930.20;1.20.120.470;1.20.1270.430;1.20.1440.210;1.20.1270.90;1.20.1440.60;1.20.81.20;1.10.8.740;1.20.1270.350;1.20.120.550;1.20.120.10;1.20.120.230;1.20.1270.360;1.20.1270.10;1.10.8.1170 | null |
5cwp | 2015-12-16 | other | id:A;type:D;source:synthetic construct;length:237;seq_nat:MSSDEEEARELIERAKEAAERAQEAAERTGDPRVRELARELKRLAQEAAEEVKRDPSSSDVNEALKLIVEAIEAAVRALEAAERTGDPEVRELARELVRLAVEAAEEVQRNPSSSDVNEALKLIVEAIEAAVRALEAAERTGDPEVRELARELVRLAVEAAEEVQRNPSSEEVNEALKKIVKAIQEAVESLREAEESGDPEKREKARERVREAVERAEEVQRDPSGWLEHHHHHH;seq_unnat:MSSDEEEARELIERAK... | 26,410.139 | P 43 21 2 | 94.260|94.260|77.630|90.000|90.000|90.000 | X-RAY DIFFRACTION | null | T.J. Brunette;F. Parmeggiani;P.S. Huang;G. Bhabha;D.C. Ekiert;S.E. Tsutakawa;G.L. Hura;J.A. Tainer;D. Baker | "Exploring the repeat protein universe through computational protein design", Nature, 528, 580-584 | 10.1038/nature16162|26675729|0006|1476-4687|NATUAS | UK | Crystal structure of de novo designed helical repeat protein dhr79 | de novo protein;helical repeat protein | 6n4n(357);8f6r(339);6xss(299);7unj(284);6xi6(139);5cwn(82);5cwc(69);5cwg(67);8e55(64);8tlp(62);7rkc(61);8tm9(61);8evm(59);8f6q(57);6xns(51) | 9drl(225) | null | null | 6n4n(357) | 9drl(225) | 7unj(0.8522999883) | 4m70(0.4192000031) | 1.20.120.470;1.20.1440.60;1.20.81.20;1.20.1270.230;1.20.120.550;1.20.5.420;1.20.120.230;1.10.246.20;1.20.1270.10;1.20.1270.50;1.20.1440.210;1.10.246.10;1.20.1270.90;1.10.8.1170;1.20.120.610;1.20.930.20 | null |
5cwq | 2015-12-16 | other | id:A;type:D;source:synthetic construct;length:241;seq_nat:MNSEELERESEEAERRLQEARKRSEEARERGDLKELAEALIEEARAVQELARVACERGNSEEAERASEKAQRVLEEARKVSEEAREQGDDEVLALALIAIALAVLALAEVACCRGNSEEAERASEKAQRVLEEARKVSEEAREQGDDEVLALALIAIALAVLALAEVACCRGNKEEAERAYEDARRVEEEARKVKESAEEQGDSEVKRLAEEAEQLAREARRHVQECRGGWLEHHHHHH;seq_unnat:MNSEELERESEE... | 26,933.738 | I 2 3 | 120.000|120.000|120.000|90.000|90.000|90.000 | X-RAY DIFFRACTION | null | T.J. Brunette;F. Parmeggiani;P.S. Huang;G. Bhabha;D.C. Ekiert;S.E. Tsutakawa;G.L. Hura;J.A. Tainer;D. Baker | "Exploring the repeat protein universe through computational protein design", Nature, 528, 580-584 | 10.1038/nature16162|26675729|0006|1476-4687|NATUAS | UK | Crystal structure of de novo designed helical repeat protein dhr81 | de novo protein;helical repeat protein | 8evm(94);8qai(94);8qag(90);8f6q(84);5cwm(78);8e0o(76);8e1e(76);9dze(66);6e9y(61);6e9z(55);6e9t(51);6xns(50) | null | null | null | 8evm(94) | null | 8qai(0.8763999939) | 4eve(0.5472000241) | 1.10.287.110;1.20.58.740;1.20.58.60;1.20.58.1280;1.20.58.180;1.25.40.90;6.10.330.20;1.20.1050.10;1.25.40.240;1.20.58.1150;1.20.58.1800;1.20.58.1360;1.20.58.150;1.20.58.1790;1.10.220.100;1.20.58.120;1.20.120.1940;1.25.10.30;1.20.58.200;1.25.40.610;1.20.1440.60;1.20.58.80;1.20.58.600;1.20.58.220;1.20.58.1080;1.20.58.1460... | null |
5d2t | 2016-09-07 | other | id:A;type:D;source:synthetic construct;length:267;seq_nat:MALAKRIIAALIVKDGRVVKGSNFENLRDSGDPVELGKFYSEIGIDELSFWDITASVEKRKTMLELVEKVAEQIDIPFTVGGGIHDFETASELILRGADKVEINTAAVENPSLITQIAQTFGSQAVVVYIAAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRGAGEIVLGSIDRLGTKSGYDTEMIRFVRPLTTLPIIAHGGAGKMEHFLEAFLAGADAAKANSVLHFREIDVRELKEYLKKHGVNVRLEGLGSLEHHHH... | 29,159.408 | P 61 2 2 | 96.338|96.338|155.323|90.00|90.00|120.00 | X-RAY DIFFRACTION | null | N.-S. Hong;C.J. Jackson;P.D. Carr | To be published | |||| | null | Directed evolutionary changes in kemp eliminase ke07 - crystal 3 wild type | de novo protein, lyase;lyase;ke07;de novo protein;kemp eliminase;directed evolution | 4z08(527);5d2w(527);5d2v(527);5d2y(516);5d30(516);5d2x(516);5d32(509);5d38(507);5d33(500);5d37(500);3tdn(246);3tdm(184) | 3iio(508);2rkx(504);3iiv(501);3iip(496);1vh7(471);1gpw(462);1thf(462);4ewn(462);3zr4(461);2wjz(461);2a0n(461);8s8r(459);8s8s(453);4evz(299);3cwo(287);2lle(274);2w6r(259);4fx7(255);3og3(253);1ka9(249);4j9j(244);1h5y(226);1ox4(144);1ox5(144);1jvn(144);1ox6(144);4axk(85);5a5w(73);5ahf(72);5ahi(72);4gj1(71);4u28(68);4tx9(6... | 4z08(0.9905999899);5d2w(0.9950000048);5d2v(0.9912999868);5d2y(0.9904000163);5d2x(0.9833999872);5d30(0.9864000082);5d32(0.9801999927);5d38(0.9664999843);5d33(0.9793000221);5d37(0.9715999961) | 2rkx(0.9927999973);3iio(0.9847000241);2a0n(0.9887999892);3iip(0.9731000066) | 4z08(527) | 3iio(508) | 5d2w(0.9950000048) | 2rkx(0.9927999973) | 3.40.1260.10;3.40.50.12600 | null |
5d2v | 2016-09-07 | other | id:A;type:D;source:synthetic construct;length:267;seq_nat:MALAKRIIAALIVKDGRVVKGSNFENLRDSGDPVELGKFYSEIGIDELSFWDITASVEKRKTMLELVEKVAEQIDIPFTVGGGIHDFETASELILRGADKVEINTAAVENPSLITQIAQTFGSQAVVVYIAAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRGAGEIVLGSIDRLGTKSGYDTEMIRFVRPLTTLPIIAHGGAGKMEHFLEAFLAGADAAKANSVLHFREIDVRELKEYLKKHGVNVRLEGLGSLEHHHH... | 29,159.408 | P 61 2 2 | 96.437|96.437|155.148|90.00|90.00|120.00 | X-RAY DIFFRACTION | null | N.-S. Hong;C.J. Jackson;P.D. Carr | To be published | |||| | null | Directed evolutionary changes in kemp eliminase ke07 - crystal 4 wild type | de novo protein, lyase;lyase;ke07;de novo protein;kemp eliminase;directed evolution | 4z08(527);5d2w(527);5d2t(527);5d2y(516);5d30(516);5d2x(516);5d32(509);5d38(507);5d33(500);5d37(500);3tdn(246);3tdm(184) | 3iio(508);2rkx(504);3iiv(501);3iip(496);1vh7(471);1gpw(462);1thf(462);4ewn(462);3zr4(461);2wjz(461);2a0n(461);8s8r(459);8s8s(453);4evz(299);3cwo(287);2lle(274);2w6r(259);4fx7(255);3og3(253);1ka9(249);4j9j(244);1h5y(226);1ox4(144);1ox5(144);1jvn(144);1ox6(144);4axk(85);5a5w(73);5ahf(72);5ahi(72);4gj1(71);4u28(68);4tx9(6... | 5d2w(0.9955999851);4z08(0.9951000214);5d2y(0.9901999831);5d2t(0.9890999794);5d30(0.9901999831);5d32(0.9817000031);5d2x(0.9832000136);5d33(0.9789000154);5d38(0.975300014);5d37(0.9704999924) | 2rkx(0.9916999936);2a0n(0.991599977);3iio(0.9836999774);3iip(0.9757999778);3iiv(0.9553999901) | 4z08(527) | 3iio(508) | 5d2w(0.9955999851) | 2rkx(0.9916999936) | null | null |
5d2w | 2016-09-07 | other | id:A;type:D;source:synthetic construct;length:267;seq_nat:MALAKRIIAALIVKDGRVVKGSNFENLRDSGDPVELGKFYSEIGIDELSFWDITASVEKRKTMLELVEKVAEQIDIPFTVGGGIHDFETASELILRGADKVEINTAAVENPSLITQIAQTFGSQAVVVYIAAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRGAGEIVLGSIDRLGTKSGYDTEMIRFVRPLTTLPIIAHGGAGKMEHFLEAFLAGADAAKANSVLHFREIDVRELKEYLKKHGVNVRLEGLGSLEHHHH... | 29,159.408 | P 61 2 2 | 97.126|97.126|155.513|90.00|90.00|120.00 | X-RAY DIFFRACTION | null | N.-S. Hong;C.J. Jackson;P.D. Carr | To be published | |||| | null | Directed evolutionary changes in kemp eliminase ke07 - crystal 5 wild type | de novo protein, lyase;lyase;ke07;de novo protein;kemp eliminase;directed evolution | 4z08(527);5d2v(527);5d2t(527);5d2y(516);5d30(516);5d2x(516);5d32(509);5d38(507);5d33(500);5d37(500);3tdn(246);3tdm(184) | 3iio(508);2rkx(504);3iiv(501);3iip(496);1vh7(471);1gpw(462);1thf(462);4ewn(462);3zr4(461);2wjz(461);2a0n(461);8s8r(459);8s8s(453);4evz(299);3cwo(287);2lle(274);2w6r(259);4fx7(255);3og3(253);1ka9(249);4j9j(244);1h5y(226);1ox4(144);1ox5(144);1jvn(144);1ox6(144);4axk(85);5a5w(73);5ahf(72);5ahi(72);4gj1(71);4u28(68);4tx9(6... | 4z08(0.9962999821);5d2v(0.9952999949);5d2t(0.9907000065);5d2y(0.9889000058);5d30(0.9897000194);5d2x(0.9801999927);5d32(0.9811999798);5d38(0.9746999741);5d33(0.9786999822);5d37(0.967599988) | 2rkx(0.9901000261);2a0n(0.991599977);3iio(0.980799973);3iip(0.9724000096);3iiv(0.9570999742) | 4z08(527) | 3iio(508) | 4z08(0.9962999821) | 2a0n(0.991599977) | null | null |
5d2x | 2016-09-21 | other | id:A;type:D;source:synthetic construct;length:267;seq_nat:MALAKRIDAALIMKDGRVVKGSNFENLRDSGDPVELGKFYSEIGIDELSFWDITASVEKRKTMLELVEKVAEQIDIPFTVGGGIHDFETASELILRGADKVEINTAAVENPSLITQIAQTFGSQAVVVYIAAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRGAGEIVLGSIDRLGTKSGYDTEMIRFVRPLTTLPIIAHRGAGKMEHFLEAFLAGADAAKADSVFHFREIDVRELKEYLKKHGVNVRLEGLGSLEHHHH... | 29,328.545 | P 61 2 2 | 97.263|97.263|156.282|90.00|90.00|120.00 | X-RAY DIFFRACTION | null | N.-S. Hong;C.J. Jackson;P.D. Carr | To be published | |||| | null | Directed evolutionary changes in kemp eliminase ke07 - crystal 6 round5 | de novo protein, lyase;lyase;ke07;de novo protein;kemp eliminase;directed evolution | 5d2y(528);5d30(528);5d32(519);5d38(519);4z08(516);5d2w(516);5d2v(516);5d2t(516);5d33(511);5d37(511);3tdn(241);3tdm(179) | 3iio(518);3iiv(512);3iip(505);2rkx(497);1vh7(467);1gpw(457);1thf(457);4ewn(457);3zr4(456);2wjz(456);2a0n(456);8s8r(454);8s8s(448);4evz(294);3cwo(286);2lle(273);2w6r(259);4fx7(249);3og3(248);1ka9(245);4j9j(241);1h5y(222);1ox4(142);1ox5(142);1jvn(142);1ox6(142);4axk(79);4u28(63);4tx9(63);2y85(61);3zs4(61);2y88(61);2y89(6... | 5d30(0.9916999936);5d2y(0.9876000285);5d32(0.9905999899);5d33(0.9921000004);5d38(0.9901999831);5d2v(0.9839000106);5d2t(0.9804999828);5d2w(0.9804999828);4z08(0.9822000265);5d37(0.9750000238) | 3iio(0.9790999889);2rkx(0.9786000252);2a0n(0.9789999723);3iiv(0.9559000134);3iip(0.972299993) | 5d2y(528) | 3iio(518) | 5d33(0.9921000004) | 3iio(0.9790999889) | 3.40.1260.10;3.40.50.40;3.40.50.10910;3.40.50.12600 | null |
5d2y | 2016-09-07 | other | id:A;type:D;source:synthetic construct;length:267;seq_nat:MALAKRIDAALIMKDGRVVKGSNFENLRDSGDPVELGKFYSEIGIDELSFWDITASVEKRKTMLELVEKVAEQIDIPFTVGGGIHDFETASELILRGADKVEINTAAVENPSLITQIAQTFGSQAVVVYIAAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRGAGEIVLGSIDRLGTKSGYDTEMIRFVRPLTTLPIIAHRGAGKMEHFLEAFLAGADAAKADSVFHFREIDVRELKEYLKKHGVNVRLEGLGSLEHHHH... | 29,328.545 | P 61 2 2 | 97.877|97.877|156.823|90.00|90.00|120.00 | X-RAY DIFFRACTION | null | N.-S. Hong;C.J. Jackson;P.D. Carr | To be published | |||| | null | Directed evolutionary changes in kemp eliminase ke07 - crystal 7 round 5 | de novo protein, lyase;lyase;ke07;de novo protein;kemp eliminase;directed evolution | 5d30(528);5d2x(528);5d32(519);5d38(519);4z08(516);5d2w(516);5d2v(516);5d2t(516);5d33(511);5d37(511);3tdn(241);3tdm(179) | 3iio(518);3iiv(512);3iip(505);2rkx(497);1vh7(467);1gpw(457);1thf(457);4ewn(457);3zr4(456);2wjz(456);2a0n(456);8s8r(454);8s8s(448);4evz(294);3cwo(286);2lle(273);2w6r(259);4fx7(249);3og3(248);1ka9(245);4j9j(241);1h5y(222);1ox4(142);1ox5(142);1jvn(142);1ox6(142);4axk(79);4u28(63);4tx9(63);2y85(61);3zs4(61);2y88(61);2y89(6... | 4z08(0.9887999892);5d2t(0.9911000133);5d2w(0.9916999936);5d2v(0.9889000058);5d30(0.9921000004);5d2x(0.9897000194);5d32(0.9835000038);5d38(0.9769999981);5d33(0.9824000001);5d37(0.9767000079) | 2rkx(0.9894000292);3iio(0.9886000156);3iip(0.9811999798);2a0n(0.9855999947);3iiv(0.9585999846) | 5d30(528) | 3iio(518) | 5d30(0.9921000004) | 2rkx(0.9894000292) | 3.30.110.10;3.80.10.10;3.40.50.12820;3.20.20.150;3.40.50.2020;3.40.50.10910;3.30.750.24;3.20.20.70;3.40.50.12600 | null |
5d30 | 2016-09-07 | other | id:A;type:D;source:synthetic construct;length:267;seq_nat:MALAKRIDAALIMKDGRVVKGSNFENLRDSGDPVELGKFYSEIGIDELSFWDITASVEKRKTMLELVEKVAEQIDIPFTVGGGIHDFETASELILRGADKVEINTAAVENPSLITQIAQTFGSQAVVVYIAAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRGAGEIVLGSIDRLGTKSGYDTEMIRFVRPLTTLPIIAHRGAGKMEHFLEAFLAGADAAKADSVFHFREIDVRELKEYLKKHGVNVRLEGLGSLEHHHH... | 29,328.545 | P 61 2 2 | 96.802|96.802|155.413|90.00|90.00|120.00 | X-RAY DIFFRACTION | null | N.-S. Hong;C.J. Jackson;P.D. Carr | To be published | |||| | null | Directed evolutionary changes in kemp eliminase ke07 - crystal 9 round 5 | de novo protein, lyase;lyase;ke07;de novo protein;kemp eliminase;directed evolution | 5d2y(528);5d2x(528);5d32(519);5d38(519);4z08(516);5d2w(516);5d2v(516);5d2t(516);5d33(511);5d37(511);3tdn(241);3tdm(179) | 3iio(518);3iiv(512);3iip(505);2rkx(497);1vh7(467);1gpw(457);1thf(457);4ewn(457);3zr4(456);2wjz(456);2a0n(456);8s8r(454);8s8s(448);4evz(294);3cwo(286);2lle(273);2w6r(259);4fx7(249);3og3(248);1ka9(245);4j9j(241);1h5y(222);1ox4(142);1ox5(142);1jvn(142);1ox6(142);4axk(79);4u28(63);4tx9(63);2y85(61);3zs4(61);2y88(61);2y89(6... | 5d2x(0.9909999967);5d2y(0.9893000126);5d2v(0.9901999831);4z08(0.9901000261);5d2w(0.9897000194);5d32(0.9879999757);5d38(0.9876000285);5d2t(0.9822000265);5d33(0.9865000248);5d37(0.9786999822) | 2rkx(0.9866999984);3iio(0.9840000272);2a0n(0.9848999977);3iiv(0.9620000124);3iip(0.9769999981) | 5d2y(528) | 3iio(518) | 5d2x(0.9909999967) | 2rkx(0.9866999984) | 3.30.110.10;3.80.10.10;3.20.20.150;3.40.50.2020;3.40.50.10910;3.30.750.24;3.40.50.12600 | null |
5d32 | 2016-09-07 | other | id:A,B;type:D;source:synthetic construct;length:266;seq_nat:MLAKRIDAALIVKDGRVVEGSNFENLRDSGDPVELGKFYSEIGIDELSFWDITASVEKRKTMLELVEKVAEQIDIPFTVGGGIHDFETASELILRGADKVEINTAAVENPSLITQIAQTFGSQAVVVYIAAKRVDGEFMVFTYSGTKNTGILLRDWVVEVEKRGAGEIVLGSIDRLGTKSGYDTEMIRFVRPLTTLPIIAHRGAGKMEHFLEAFLAGADAAKADSVFHFREIDVRELKEYLKKHGVNVRLEGLGSLEHHH... | 29,197.264 | P 21 21 21 | 38.881|82.281|170.934|90.00|90.00|90.00 | X-RAY DIFFRACTION | null | N.-S. Hong;C.J. Jackson;P.D. Carr | To be published | |||| | null | Directed evolutionary changes in kemp eliminase ke07 - crystal 11 round 6 | de novo protein, lyase;lyase;ke07;de novo protein;kemp eliminase;directed evolution | 5d2y(519);5d30(519);5d2x(519);5d38(515);5d37(513);5d33(511);4z08(510);5d2w(510);5d2v(510);5d2t(510);3tdn(239);3tdm(177) | 3iio(513);3iiv(511);3iip(507);2rkx(497);1vh7(465);1gpw(456);1thf(456);4ewn(456);3zr4(455);2wjz(455);2a0n(455);8s8r(453);8s8s(445);4evz(295);3cwo(284);2lle(271);2w6r(256);4fx7(247);3og3(245);1ka9(241);4j9j(239);1h5y(220);1ox4(143);1ox5(143);1jvn(143);1ox6(143);4axk(79);4u28(63);4tx9(63);2y85(62);3zs4(62);2y88(62);2y89(6... | 5d2x(0.9921000004);5d38(0.9968000054);5d2y(0.9818999767);5d33(0.993900001);5d2v(0.9793999791);5d30(0.9894000292);4z08(0.9803000093);5d2t(0.9779000282);5d2w(0.9771000147);5d37(0.9829999804) | 3iio(0.9775999784);3iiv(0.9646000266);2rkx(0.9789999723);3iip(0.9751999974);2a0n(0.9769999981) | 5d2y(519) | 3iio(513) | 5d38(0.9968000054) | 2rkx(0.9789999723) | 3.20.20.190;3.20.20.60;3.20.20.410;3.20.20.380;3.20.20.390;3.20.20.120;3.20.20.150;3.20.20.220;3.20.20.540;3.20.20.20;3.20.20.80;3.20.20.520;3.20.20.40;3.20.20.70;3.20.20.370;3.40.50.12600;3.20.20.140 | null |
5d33 | 2016-09-07 | other | id:A,B;type:D;source:synthetic construct;length:265;seq_nat:LAKRIDAALILKDGRVVKGSNFENLRDSGDPVELGKFYSEIGIDELSFWDITASVEKRKTMLELVEKVAEQIDIPITVGGGIYDFETASELILRGADKVEINTAAVENPSLITQIAQTFGSQAVVVYIAAKRVDGEFMVFTYSGTKNTGILLRDWVVEVEKRGAGEIVLGSIDRLGTKSGYDTEMIRFVRPLTTLPIIAHRGAGKTEHFLEAFLAGADAAKADSVFHSREIDVRELKEYLKKHGVNVRLEGLGSLEHHHH... | 28,980.986 | P 21 21 21 | 38.984|82.722|176.972|90.00|90.00|90.00 | X-RAY DIFFRACTION | null | N.-S. Hong;C.J. Jackson;P.D. Carr | To be published | |||| | null | Directed evolutionary changes in kemp eliminase ke07 - crystal 12 round 7 | de novo protein, lyase;lyase;ke07;de novo protein;kemp eliminase;directed evolution | 5d37(522);5d38(516);5d32(511);5d2y(511);5d30(511);5d2x(511);4z08(500);5d2w(500);5d2v(500);5d2t(500);3tdn(237);3tdm(174) | 3iiv(522);3iio(503);3iip(494);2rkx(485);1vh7(454);1thf(445);4ewn(445);1gpw(444);3zr4(443);2wjz(443);2a0n(443);8s8r(441);8s8s(436);4evz(289);3cwo(278);2lle(265);2w6r(252);4fx7(247);3og3(245);4j9j(238);1ka9(236);1h5y(218);1ox4(145);1ox5(145);1jvn(145);1ox6(145);4axk(79);4u28(63);4tx9(63);2y85(61);3zs4(61);2y88(61);2y89(6... | 5d38(0.9908999801);5d37(0.9893000126);5d32(0.9880999923);5d30(0.9832000136);5d2y(0.9749000072);5d2x(0.9876999855);5d2v(0.9746000171);5d2w(0.9746999741);5d2t(0.9721000195);4z08(0.9664000273) | 3iiv(0.9926000237);3iio(0.9688000083);3iip(0.9631000161);2rkx(0.9728000164);2a0n(0.9725000262) | 5d37(522) | 3iiv(522) | 5d38(0.9908999801) | 3iiv(0.9926000237) | 3.40.50.2300;3.40.50.300;3.40.50.12600 | null |
5d37 | 2016-09-07 | other | id:A,B;type:D;source:synthetic construct;length:266;seq_nat:MLAKRIDAALILKDGRVVKGSNFENLRDSGDPVELGKFYSEIGIDELSFWDITASVEKRKTMLELVEKVAEQIDIPITVGGGIYDFETASELILRGADKVEINTAAVENPSLITQIAQTFGSQAVVVYIAAKRVDGEFMVFTYSGTKNTGILLRDWVVEVEKRGAGEIVLGSIDRLGTKSGYDTEMIRFVRPLTTLPIIAHRGAGKTEHFLEAFLAGADAAKADSVFHSREIDVRELKEYLKKHGVNVRLEGLGSLEHHH... | 29,112.182 | P 21 21 21 | 39.357|83.480|171.305|90.00|90.00|90.00 | X-RAY DIFFRACTION | null | N.-S. Hong;C.J. Jackson;P.D. Carr | To be published | |||| | null | Directed evolutionary changes in kemp eliminase ke07 - crystal 16 round 7 | de novo protein, lyase;lyase;ke07;de novo protein;kemp eliminase;directed evolution | 5d33(522);5d38(516);5d32(513);5d2y(511);5d30(511);5d2x(511);4z08(500);5d2w(500);5d2v(500);5d2t(500);3tdn(237);3tdm(174) | 3iiv(522);3iio(503);3iip(494);2rkx(487);1vh7(455);1thf(447);4ewn(447);1gpw(446);3zr4(445);2wjz(445);2a0n(445);8s8r(443);8s8s(436);4evz(291);3cwo(278);2lle(265);2w6r(252);4fx7(247);3og3(245);4j9j(238);1ka9(236);1h5y(218);1ox4(145);1ox5(145);1jvn(145);1ox6(145);4axk(79);4u28(63);4tx9(63);2y85(61);3zs4(61);2y88(61);2y89(6... | 5d33(0.9875000119);5d38(0.9739000201);5d32(0.97299999);5d2x(0.9667999744);5d30(0.9708999991);5d2v(0.9610000253);5d2y(0.9653999805);5d2w(0.9603999853);5d2t(0.9602000117);4z08(0.9602000117) | 3iio(0.961499989);2rkx(0.9578999877);2a0n(0.9571999907);3iiv(0.9772999883) | 5d33(522) | 3iiv(522) | 5d33(0.9875000119) | 3iiv(0.9772999883) | 3.20.20.10;3.20.20.410;3.20.20.60;3.20.20.380;3.20.20.390;3.20.20.120;3.40.1260.10;3.20.20.150;3.20.20.220;3.20.20.80;3.20.20.20;3.20.20.110;3.20.20.520;3.20.20.40;3.20.20.70;3.20.20.370;3.20.20.140 | null |
5d38 | 2016-09-07 | other | id:A,B;type:D;source:synthetic construct;length:267;seq_nat:MALAKRIDAALIMKDGRVVKGSNFENLRDSGDPVELGKFYSEIGIDELSFWDITASVEKRKTMLELVEKVAEQIDIPITVGGGIHDFETASELILRGADKVEFNTAAVENPSLITQIAQTFGSQAVVVYIAAKRVDGEFMVFTYSGTKNTGILLRDWVVEVEKRGAGEIVLGSIDRLGTKSGYDTEMIRFVRPLTTLPIIAHRGAGKMEHFLEAFLAGADAAKADSVFHSREIDVRELKEYLKKHGVNVRLEGLGSLEHH... | 29,240.377 | P 21 21 21 | 38.996|81.290|168.667|90.00|90.00|90.00 | X-RAY DIFFRACTION | null | N.-S. Hong;C.J. Jackson;P.D. Carr | To be published | |||| | null | Directed evolutionary changes in kemp eliminase ke07 - crystal 17 round 7-2 | de novo protein, lyase;lyase;ke07;de novo protein;kemp eliminase;directed evolution | 5d2y(519);5d30(519);5d2x(519);5d33(516);5d37(516);5d32(514);4z08(507);5d2w(507);5d2v(507);5d2t(507);3tdn(238);3tdm(177) | 3iiv(517);3iio(510);3iip(500);2rkx(488);1vh7(457);1thf(448);4ewn(448);1gpw(447);3zr4(447);2wjz(447);2a0n(447);8s8r(445);8s8s(439);4evz(289);3cwo(279);2lle(266);2w6r(257);4fx7(248);3og3(246);1ka9(240);4j9j(239);1h5y(218);1ox4(143);1ox5(143);1jvn(143);1ox6(143);4axk(80);4u28(64);4tx9(64);2x30(61);5dn1(61);2vep(61);1vzw(6... | 5d33(0.9824000001);5d32(0.986899972);5d37(0.9700000286);5d2x(0.9781000018);5d30(0.9742000103);5d2y(0.9611999989);5d2v(0.9610000253);5d2w(0.9610999823);4z08(0.9521999955) | 3iip(0.9557999969);3iio(0.9581999779);2rkx(0.9624999762);2a0n(0.9602000117);3iiv(0.9635000229) | 5d2y(519) | 3iiv(517) | 5d32(0.986899972) | 3iiv(0.9635000229) | 3.40.50.10580;3.40.1260.10;3.40.50.12600;3.30.420.270 | null |
5di5 | 2016-08-31 | other | id:A;type:D;source:synthetic construct;length:249;seq_nat:MGSSHHHHHHSSGLVPRGSHMNVGEILRHYAAGKRNFQHINLQEIELTNASLTGADLSYANLHHANLSRANLRSADLRNANLSHANLRGANLEEANLEAANLRGADLIGANLSGADLQEANLTQAQLGLGVEDGGLGADLSDANLEQADLAGANLAGAVLDGANLHGANLNNANLDYAMLTRANLEQADLSGARTTGARLDDADLRGATVDPVLWRTASLVGARVDVDQAVAFAAAHGLCLAGGSG;seq_unnat:MGSSH... | 25,479.969 | P 32 2 1 | 123.460|123.460|47.830|90.00|90.00|120.00 | X-RAY DIFFRACTION | null | J.T. MacDonald;B.V. Kabasakal;D. Godding;S. Kraatz;L. Henderson;J. Barber;P.S. Freemont;J.W. Murray | "Synthetic beta-solenoid proteins with the fragment-free computational design of a beta-hairpin extension", Proc.Natl.Acad.Sci.USA, 113, 10346-10351 | 10.1073/pnas.1525308113|27573845|0040|1091-6490|PNASA6 | US | Beta1 t801 loop variant in p3221 | protein design;de novo protein;synthetic protein | 5dqa(441);5dns(440);5dn0(436);4yc5(416);5dzb(408);4yfo(408);5dra(374);7m0q(53);8r0d(52);6vgb(50);6y07(50) | 4ydt(416);4ycq(416);4yei(411);3du1(214);2j8k(163);2bm4(138);2bm5(138);2bm6(138);2bm7(138);2j8i(115);2f3l(76);2g0y(76);2hwv(59);3ixr(58);4evd(57);4eve(57);3ta8(57);3t9j(57);4evb(57);4evc(57);3vol(57);2b4o(57);2b4p(57);2b4u(57);3s6g(57);3s6h(57);4kzt(57);3s7y(57);21jh(57);21kg(57);4l3f(56);2vq9(55);4yr8(55);4owy(55);2wc9... | 5dns(0.9501000047) | 4ycq(0.9516000152) | 5dqa(441) | 4ydt(416) | 5dns(0.9501000047) | 4ycq(0.9516000152) | 2.160.20.120;2.160.20.130;3.80.10.10;2.160.20.50;2.160.20.10;2.160.20.80;2.160.20.70;3.40.50.12480 | null |
5dn0 | 2016-08-31 | other | id:A;type:D;source:synthetic construct;length:250;seq_nat:MGSSHHHHHHSSGLVPRGSHMNVGEILRHYAAGKRNFQHINLQEIELTNASLTGADLSYANLHHANLSRANLRSADLRNANLSHANLSGANLEEANLEAANLRGADLAGANLSGADLQEANLTQAMLGKDEDGVVYGADLSDANLEQADLAGAQLVGAVLDGANLHGANLNNANLDNAMLTRANLEQADLSGARTTGARLDDADLRGATVDPVLWRTASLVGARVDVDQAVAFAAAHGLCLAGGSGC;seq_unnat:MGSS... | 25,633.145 | I 41 2 2 | 108.270|108.270|151.090|90.00|90.00|90.00 | X-RAY DIFFRACTION | null | J.T. MacDonald;B.V. Kabasakal;D. Godding;S. Kraatz;L. Henderson;J. Barber;P.S. Freemont;J.W. Murray | "Synthetic beta-solenoid proteins with the fragment-free computational design of a beta-hairpin extension", Proc.Natl.Acad.Sci.USA, 113, 10346-10351 | 10.1073/pnas.1525308113|27573845|0040|1091-6490|PNASA6 | US | T1555 loop variant | de novo protein;synthetic protein | 5dns(451);5dqa(441);5di5(437);4yc5(419);5dzb(415);4yfo(415);5dra(377);7m0q(53);6vgb(50);6y07(50) | 4ydt(419);4ycq(419);4yei(414);3du1(215);2j8k(163);2bm4(141);2bm5(141);2bm6(141);2bm7(141);2j8i(116);2f3l(78);2g0y(78);2hwv(59);3ixr(58);4evd(57);4eve(57);3ta8(57);3t9j(57);4evb(57);4evc(57);2b4o(57);2b4p(57);2b4u(57);4d2w(57);4d2p(57);4ump(57);4umq(57);4umr(57);4umt(57);4umu(57);4d2t(57);4d2v(57);21jh(57);21kg(57);4k8g... | null | null | 5dns(451) | 4ydt(419) | 5dns(0.9499999881) | 4yei(0.9390000105) | 6.10.250.1960;6.10.250.1560;2.160.20.80;2.160.20.70;2.160.20.130;6.10.250.400;6.10.250.1590;3.80.10.10;4.10.180.60;1.20.5.460;4.10.180.10;1.20.5.740;2.160.20.10;6.10.250.1110;2.160.20.50;1.20.5.510;6.10.250.2050;1.20.5.220;1.20.5.640;6.10.250.1990 | null |
5dns | 2016-09-28 | other | id:A,B;type:D;source:synthetic construct;length:250;seq_nat:MGSSHHHHHHSSGLVPRGSHMNVGEILRHYAAGKRNFQHINLQEIELTNASLTGADLSYANLHHANLSRANLRSADLRNANLSHANLSGANLEEANLEAANLRGANLVGANLSGADLQEANLTQAMLGQTYPWGTVGADLSDANLEQADLAGAQLVGAVLDGANLHGANLNNANLDNAMLTRANLEQADLSGARTTGARLDDADLRGATVDPVLWRTASLVGARVDVDQAVAFAAAHGLCLAGGSGC;seq_unnat:MG... | 25,686.273 | P 32 2 1 | 104.570|104.570|87.480|90.00|90.00|120.00 | X-RAY DIFFRACTION | null | J.T. MacDonald;B.V. Kabasakal;D. Godding;S. Kraatz;L. Henderson;J. Barber;P.S. Freemont;J.W. Murray | "Synthetic beta-solenoid proteins with the fragment-free computational design of a beta-hairpin extension", Proc.Natl.Acad.Sci.USA, 113, 10346-10351 | 10.1073/pnas.1525308113|27573845|0040|1091-6490|PNASA6 | US | T1428 loop variant in p3221 | protein design;de novo protein;synthetic protein | 5dn0(449);5dqa(440);5di5(439);4yc5(416);5dzb(411);4yfo(411);5dra(374);7m0q(53);6vgb(50);6y07(50);8r0d(50) | 4ydt(416);4ycq(416);4yei(411);3du1(211);2j8k(162);2bm4(143);2bm5(143);2bm6(143);2bm7(143);2j8i(113);2f3l(78);2g0y(78);2hwv(59);3ixr(58);4evd(57);4eve(57);3ta8(57);3t9j(57);4evb(57);4evc(57);2b4o(57);2b4p(57);2b4u(57);21jh(57);21kg(57);2k4m(56);2vq9(55);4yr8(55);4owy(55);2wc9(55);2wbn(55);3vol(55);2dps(55);2dpt(55);3nd1... | 5dqa(0.9726999998);5dn0(0.9542999864);4yc5(0.9573000073) | 4yei(0.9592000246) | 5dn0(449) | 4ydt(416) | 5dqa(0.9726999998) | 4yei(0.9592000246) | 6.10.250.1960;6.10.250.1110;2.160.20.120;1.20.5.510;6.10.250.2050;2.160.20.130;3.80.10.10;4.10.180.60;6.10.250.400;1.20.5.460;4.10.180.10;2.160.20.10;2.160.20.50;6.10.250.1560;1.20.5.220;1.20.5.640;2.160.20.80;2.160.20.70 | null |
5dqa | 2016-08-31 | other | id:A,B,C;type:D;source:synthetic construct;length:250;seq_nat:MGSSHHHHHHSSGLVPRGSHMNVGEILRHYAAGKRNFQHINLQEIELTNASLTGADLSYANLHHANLSRANLRSADLRNANLSHANLEGANLEEANLEAANLRGARLAGANLSGADLQEANLTQANLGGPPDDGDPGADLSDANLEQADLAGANLAGAVLDGANLHGANLNNANLDNAMLTRANLEQADLSGARTTGARLDDADLRGATVDPVLWRTASLVGARVDVDQAVAFAAAHGLCLAGGSGC;seq_unnat:... | 25,501.869 | I 2 2 2 | 106.060|115.710|167.890|90.00|90.00|90.00 | X-RAY DIFFRACTION | null | J.T. MacDonald;B.V. Kabasakal;D. Godding;S. Kraatz;L. Henderson;J. Barber;P.S. Freemont;J.W. Murray | "Synthetic beta-solenoid proteins with the fragment-free computational design of a beta-hairpin extension", Proc.Natl.Acad.Sci.USA, 113, 10346-10351 | 10.1073/pnas.1525308113|27573845|0040|1091-6490|PNASA6 | US | T3284 loop variant of beta1 | loop design;de novo protein;synthetic protein | 5di5(443);5dns(443);5dn0(441);4yc5(417);5dzb(413);4yfo(413);5dra(375);7m0q(53);6vgb(50);6y07(50) | 4ydt(417);4ycq(417);4yei(412);3du1(211);2j8k(164);2bm4(140);2bm5(140);2bm6(140);2bm7(140);2j8i(113);2f3l(72);2g0y(72);2hwv(59);3ixr(58);4evd(57);4eve(57);3ta8(57);3t9j(57);4evb(57);4evc(57);2b4o(57);2b4p(57);2b4u(57);3s6g(57);3s6h(57);4kzt(57);3s7y(57);21jh(57);21kg(57);3c48(56);2vq9(55);2k4m(55);4yr8(55);4owy(55);2wc9... | 4yc5(0.9847000241);5dns(0.9732999802) | 4yei(0.9872999787) | 5di5(443) | 4ydt(417) | 4yc5(0.9847000241) | 4yei(0.9872999787) | 6.10.250.1960;1.20.5.2620;6.10.250.1560;2.160.20.80;2.160.20.70;3.40.50.12480;2.160.20.130;6.10.250.400;6.10.250.1590;3.80.10.10;4.10.180.60;1.20.5.460;4.10.180.10;1.20.5.740;2.160.20.10;6.10.250.1110;2.160.20.50;2.160.20.120;1.20.5.510;6.10.250.2050;1.20.5.220;1.20.5.640;6.10.250.1990 | null |
5dra | 2016-08-31 | other | id:A;type:D;source:synthetic construct;length:221;seq_nat:MGSSHHHHHHSSGLVPRGSHMNVGEILRHYAAGKRNFQHINLQEIELTNASLTGADLSYANLHHANLSRANLRSADLRNANLSHANLSGANLEEANLEAANLRGADLHEANLSGADLQEANLTQANLKDANLSDANLEQANLNNANLSEAMLTRANLEQADLSGARTTGARLDDADLRGATVDPVLWRTASLVGARVDVDQAVAFAAAHGLCLAGGSEL;seq_unnat:MGSSHHHHHHSSGLVPRGSHMNVGEILRHYAA... | 23,201.432 | P 43 21 2 | 48.340|48.340|221.390|90.00|90.00|90.00 | X-RAY DIFFRACTION | null | J.T. MacDonald;B.V. Kabasakal;D. Godding;S. Kraatz;L. Henderson;J. Barber;P.S. Freemont;J.W. Murray | "Synthetic beta-solenoid proteins with the fragment-free computational design of a beta-hairpin extension", Proc.Natl.Acad.Sci.USA, 113, 10346-10351 | 10.1073/pnas.1525308113|27573845|0040|1091-6490|PNASA6 | US | T3284 loop variant of beta1 | loop design;de novo protein;synthetic protein | 4yc5(402);5dzb(396);4yfo(396);5di5(376);5dn0(376);5dqa(375);5dns(374);7m0q(53);6vgb(50);6y07(50) | 4ydt(402);4ycq(402);4yei(396);3du1(198);2j8k(172);2bm4(138);2bm5(138);2bm6(138);2bm7(138);2j8i(116);2f3l(79);2g0y(79);2hwv(59);3ixr(58);4evd(57);4eve(57);3ta8(57);3t9j(57);4evb(57);4evc(57);2b4o(57);2b4p(57);2b4u(57);21jh(57);21kg(57);4l3f(56);2vq9(55);2mux(55);4yr8(55);4owy(55);2wc9(55);2wbn(55);3vol(55);2dps(55);2dpt... | null | null | 4yc5(402) | 4ydt(402) | 4yc5(0.8525999784) | 4yei(0.8543000221) | 6.10.250.1960;6.10.250.1110 | null |
5dxv | 2016-06-08 | other | id:A,B;type:D;source:synthetic construct;length:157;seq_nat:MAISLIAALAVDRVIGDTHFPDYEPDDWESVFSEFHDADAQNPADLAWFKRNTLDKPVIMGRHTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEGHSYCFEILERRLEHHHHHH;seq_unnat:MAISLIAALAVDRVIGDTHFPDYEPDDWESVFSEFHDADAQNPADLAWFKRNTLDKPVIMGRHTWESIGRPLPGRKNIILSSQPGTDDRVTWV... | 17,836.078 | C 2 2 21 | 44.817|120.054|111.187|90.00|90.00|90.00 | X-RAY DIFFRACTION | null | S. Agah;S. Poulos;A. Yu;I. Kucharska;S. Faham | "Protein rethreading: A novel approach to protein design", Sci Rep, 6, 26847-26847 | 10.1038/srep26847|27229326||2045-2322| | UK | Crystal structure of rethreaded dhfr | protein design;de novo protein | null | 8v9r(226);1rh3(224);3qyl(224);1rx1(224);1rx2(224);1tdr(224);7dfr(224);1rx3(224);1re7(224);1rx4(224);2ano(224);1rx5(224);3drc(224);5dfr(224);1rx6(224);2anq(224);1rx7(224);2inq(224);1rx8(224);1rx9(224);3r33(224);1dre(224);1rd7(224);1ra1(224);1rc4(224);1ra2(224);1ra3(224);1drh(224);1rf7(224);1rb2(224);1ra8(224);1rb3(224);... | null | null | 5dxv(0) | 8v9r(226) | 8jku(0.4237999916) | 6dfr(0.7979000211) | 3.40.430.10;3.40.1010.10 | null |
5dzb | 2016-08-31 | other | id:A,B,C,D,E,F;type:D;source:synthetic construct;length:262;seq_nat:MGSSHHHHHHSSGLVPRGSHMNVGEILRHYAAGKRNFQHINLQEIELTNASLTGADLSYANLHHANLSRANLRSADLRNANLSHANLSGANLEEANLEAANLRGADLHEANLSGADLQEANLTQANLKDANLSDANLEQADLAGADLQGAVLDGANLHGADLNGADLKQADLSGADLGGANLNNANLSEAMLTRANLEQADLSGARTTGARLDDADLRGATVDPVLWRTASLVGARVDVDQAVAFAAAHGLC... | 26,864.357 | P 21 21 21 | 56.960|86.530|362.320|90.00|90.00|90.00 | X-RAY DIFFRACTION | null | J.T. MacDonald;B.V. Kabasakal;D. Godding;S. Kraatz;L. Henderson;J. Barber;P.S. Freemont;J.W. Murray | "Synthetic beta-solenoid proteins with the fragment-free computational design of a beta-hairpin extension", Proc.Natl.Acad.Sci.USA, 113, 10346-10351 | 10.1073/pnas.1525308113|27573845|0040|1091-6490|PNASA6 | US | 6beta1 | loop design;de novo protein;synthetic protein | 4yfo(494);4yc5(439);5dn0(414);5dqa(413);5dns(412);5di5(410);5dra(396);7m0q(53);6vgb(50);6y07(50) | 4ydt(439);4ycq(439);4yei(434);3du1(233);2j8k(171);2bm4(145);2bm5(145);2bm6(145);2bm7(145);2j8i(115);2f3l(79);2g0y(79);2hwv(59);3ixr(58);4evd(57);4eve(57);3ta8(57);3t9j(57);4evb(57);4evc(57);2b4o(57);2b4p(57);2b4u(57);3s6g(57);3s6h(57);4kzt(57);3s7y(57);21jh(57);21kg(57);4l3f(56);2vq9(55);2mux(55);4yr8(55);4owy(55);2wc9... | 4yfo(0.9847000241) | null | 4yfo(494) | 4ydt(439) | 4yfo(0.9847000241) | 4yei(0.8679000139) | 6.10.250.1960;1.20.5.2620;6.10.250.1560;2.160.20.80;2.160.20.70;2.160.20.130;6.10.250.400;3.80.10.10;4.10.180.60;1.20.5.460;4.10.180.10;2.160.20.10;6.10.250.1110;2.160.20.50;2.160.20.120;1.20.5.510;6.10.250.2050;1.20.5.220;1.20.5.640 | null |
5e6g | 2016-05-18 | other | id:A,B;type:D;source:synthetic construct;length:137;seq_nat:MRGSHHHHHHGTGENLYFQGGSPEQMAEEIRQALEKILKQLENEIEIARNAGDDEREDRYRIAYLAALEAYRLLAEGVRIPEAVQRAAAYLASMGYPHYAELFRAKGEELVKRLLEGKVTGEEFARQLVFYPAQAV;seq_unnat:MRGSHHHHHHGTGENLYFQGGSPEQMAEEIRQALEKILKQLENEIEIARNAGDDEREDRYRIAYLAALEAYRLLAEGVRIPEAVQRAAAYLASMGYPHYAELFRAKGEELVKR... | 15,530.472 | H 3 | 116.537|116.537|57.215|90.00|90.00|120.00 | X-RAY DIFFRACTION | null | T.M. Jacobs;B. Williams;T. Williams;X. Xu;A. Eletsky;J.F. Federizon;T. Szyperski;B. Kuhlman | "Design of structurally distinct proteins using strategies inspired by evolution", Science, 352, 687-690 | 10.1126/science.aad8036|27151863|0038|1095-9203|SCIEAS | US | Crystal structure of de novo designed protein ca01 | protein engineering;de novo protein;computational design | null | 4cjx(50) | null | null | 9cte(49) | 4cjx(50) | 3v1e(0.6502000093) | 2d5k(0.6700999737) | 1.20.1440.140;1.20.58.80;1.20.1270.430;1.20.1270.360;1.10.150.110;1.20.120.1800;1.10.150.300;1.10.238.10;1.10.3450.10;1.20.272.10;1.20.1480.20 | null |
5ehb | 2016-06-15 | other | id:A,B;type:U;source:unknown;length:32;seq_nat:TDKIYDALEKLAEIQKEIAEFLRELIEAAEKT;seq_unnat:TDKI(IYR)DALEKLAEIQKEIAEFLRELIEAAEKT | 3,853.132 | H 3 2 | 53.068|53.068|136.114|90.000|90.000|120.000 | X-RAY DIFFRACTION | Designed sequence | R. Lizatovic;O. Aurelius;O. Stenstrom;T. Drakenberg;M. Akke;D.T. Logan;I. Andre | "A De Novo Designed Coiled-Coil Peptide with a Reversible pH-Induced Oligomerization Switch", Structure, 24, 946-955 | 10.1016/j.str.2016.03.027|27161978|2005|0969-2126|STRUE6 | UK | A de novo designed hexameric coiled-coil peptide with iodotyrosine | peptide design;de novo protein;coiled-coil | null | null | null | null | 5ehb(0) | null | 5ehb(0) | null | 6.10.250.770;1.20.5.420;1.20.5.2620;1.20.5.1450;1.20.5.700;6.10.250.500;6.10.250.200;6.10.250.2150;6.10.250.880;1.20.5.3960;6.10.250.2720;6.10.250.2060;6.10.250.1090;6.10.250.2370;6.10.250.1210;6.10.250.1020;6.10.250.1440;1.20.5.1610;6.10.250.160;6.10.250.850;6.10.250.490;6.10.250.380;6.10.250.2230;1.20.5.110;1.20.5.25... | null |
5eil | 2016-11-16 | other | id:A,B,C;type:D;source:synthetic construct;length:160;seq_nat:MSKLGEMLIXAVLIGSKEAVKVLLDLGADPNASDEDGLTPLHAAAMAGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENGHKEIVKLLLSKGADPNTSDSDGRTPLDLAREHGNEEIVKLLEKQG;seq_unnat:MSKLGEMLI(BP5)AVLIGSKEAVKVLLDLGADPNASDEDGLTPLHAAAMAGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENGHKE... | 16,977.205 | P 1 21 1 | 63.107|63.940|64.831|90.00|116.87|90.00 | X-RAY DIFFRACTION | null | J.H. Mills;W. Sheffler;M.E. Ener;P.J. Almhjell;G. Oberdorfer;J.H. Pereira;F. Parmeggiani;B. Sankaran;P.H. Zwart;D. Baker | "Computational design of a homotrimeric metalloprotein with a trisbipyridyl core", Proc. Natl. Acad. Sci. U.S.A., 113, 15012-15017 | 10.1073/pnas.1600188113|27940918|0040|1091-6490|PNASA6 | US | Computational design of a high-affinity metalloprotein homotrimer containing a metal chelating non-canonical amino acid | bpy;non canonical aminoacid;de novo protein;design | 4hb5(286);4gmr(264);4hqd(263);4gpm(262);5hs0(240);5hry(231);5kba(229);4qfv(191);2xee(181);4o60(181);2xeh(177);7z71(174);7z7e(169);7b4w(169);7z7c(169);6fpa(169);6fpb(169);6c9k(169);9epa(168);9fe1(168);6fp9(168);8ve7(168);5op3(167);4j7w(166);8v9o(166);9g8i(165);7b4t(165);5oou(165);5oos(165);9gtk(165);5le9(165);7zyu(164);... | 4k5a(175);3zu7(173);4hll(171);4zfh(169);4hrl(168);4hrm(168);3noc(166);2p2c(164);5fin(164);5fio(164);3nog(163);4jb8(163);5enr(162);4dx6(162);4u96(162);5ens(162);4dx7(162);4u8v(162);5en5(162);9fhc(162);5ent(162);4u8y(162);5eno(162);2j8s(162);5enp(162);9fhg(162);9fhj(162);5enq(162);9hao(162);4c48(162);9hci(162);4k5b(162);... | 7z7e(0.9606999755);7zyu(0.953700006);7z7c(0.9620000124);5lea(0.9623000026);4hb5(0.9524999857);4gpm(0.9509999752);5hs0(0.9534999728);5kba(0.9527000189);2xee(0.9603999853);5knh(0.9573000073);7z71(0.954400003);9epa(0.9609000087);6fpb(0.950699985);9gtk(0.9570000172);5kng(0.9520000219);5le7(0.956099987);4ydw(0.951300025);6f... | 5aq9(0.9569000006);5fin(0.9606999755);4k5a(0.951300025);4jb8(0.953700006);4k5b(0.9611999989);4ydy(0.9520999789) | 4hb5(286) | 4k5a(175) | 5lea(0.9623000026) | 4k5b(0.9611999989) | 1.25.40.290;1.10.10.2400;1.25.40.70;1.10.220.10;1.25.40.40;1.20.970.10;1.25.10.10;1.25.40.20;1.25.40.850 | null |
5eoj | 2016-05-25 | other | id:A,B,C;type:D;source:synthetic construct;length:31;seq_nat:XELKAIAQEFKAIAKEFKAIAFEFKAIAQKX;seq_unnat:(ACE)ELKAIAQEFKAIAKEFKAIA(PHI)EFKAIAQK(NH2) | 3,438.856 | P 43 2 2 | 40.850|40.850|118.150|90.00|90.00|90.00 | X-RAY DIFFRACTION | null | R.K. Spencer;A.I. Hochbaum | "X-ray Crystallographic Structure and Solution Behavior of an Antiparallel Coiled-Coil Hexamer Formed by de Novo Peptides", Biochemistry, 55, 3214-3223 | 10.1021/acs.biochem.6b00201|27192036|0033|0006-2960|BICHAW | US | Crystal structure of an antiparallel hexamer coiled-coil - acc-hex-phei | de novo protein;heptad repeat;coiled-coil;hexamer | null | null | 5vte(0.9929000139);5eon(0.9984999895);3r3k(0.996999979);4h8g(0.9986000061);6q5n(0.9865000248);6q5p(0.9916999936);4h8m(0.9940000176);3r48(0.9968000054);6q5o(0.9937999845);3r46(0.9948999882);4h7r(0.997600019);4h8f(0.9708999991);6q5j(0.9957000017);6q5s(0.9965999722);3r47(0.9508000016);4h8o(1);8a3g(0.9617999792);8qac(0.997... | 4kvt(0.9973000288);4kvu(0.9921000004);4kvv(0.9926000237) | 5eoj(0) | null | 4h8o(1) | 4kvt(0.9973000288) | 1.20.5.220;1.10.287.1100;6.10.250.740 | null |
5eon | 2016-05-25 | other | id:A,B,C;type:U;source:unknown;length:31;seq_nat:XELKAIAQEFKAIAKEFKAIAWEFKAIAQKX;seq_unnat:(ACE)ELKAIAQEFKAIAKEFKAIAWEFKAIAQK(NH2) | 3,351.995 | P 42 21 2 | 59.256|59.256|52.519|90.00|90.00|90.00 | X-RAY DIFFRACTION | null | R.K. Spencer;A.I. Hochbaum | "X-ray Crystallographic Structure and Solution Behavior of an Antiparallel Coiled-Coil Hexamer Formed by de Novo Peptides", Biochemistry, 55, 3214-3223 | 10.1021/acs.biochem.6b00201|27192036|0033|0006-2960|BICHAW | US | Crystal structure of a de novo antiparallel coiled-coil hexamer - acc-hex | de novo protein;antiparallel;coiled-coil;hexamer | null | null | 5eoj(0.9984999895);5vte(0.9988999963);6q5n(0.9983000159);3r3k(0.9983000159);4h8m(1);6q5p(1);3r46(1);3r48(1);6q5o(1);4h7r(1);6q5j(1);4h8g(1);6q5s(1);3r47(0.9549000263);8qac(1);8a3g(0.9715999961);6q5r(0.9767000079);4h8f(0.9761999846);4h8o(1);6q5q(0.9761999846);3r4a(1);8qaa(0.9767000079);8b45(0.9962000251);8qab(0.97549998... | 4kvt(1);4kvv(1);4kvu(1) | 5eon(0) | null | 6q5p(1) | 4kvu(1) | 6.10.250.770;1.20.5.420;1.20.5.2620;1.20.5.1450;1.20.5.700;6.10.250.500;6.10.250.2150;6.10.250.200;6.10.250.740;6.10.250.2720;1.20.5.3960;6.10.250.2060;1.20.5.470;6.10.250.1090;6.10.250.2370;6.10.250.1210;6.10.250.1020;6.10.250.1440;1.20.5.1610;6.10.250.1160;6.10.250.850;6.10.250.380;6.10.250.1590;6.10.250.490;6.10.250... | null |
5et3 | 2016-05-04 | other | id:A,B;type:U;source:unknown;length:30;seq_nat:AEAESALEYAQQALEKAQLALQAARQALKA;seq_unnat:AEAESALEYAQQALEKAQLALQAARQALKA | 3,188.565 | P 62 | 42.145|42.145|66.787|90.000|90.000|120.000 | X-RAY DIFFRACTION | null | K.-H. Kim;D.-K. Ko;Y.-T. Kim;N.H. Kim;J. Paul;S.-Q. Zhang;C.B. Murray;R. Acharya;W.F. DeGrado;Y.H. Kim;G. Grigoryan | "Protein-directed self-assembly of a fullerene crystal", Nat Commun, 7, 11429-11429 | 10.1038/ncomms11429|27113637||2041-1723| | UK | Crystal structure of de novo designed fullerene organizing peptide | helical assembly;de novo protein;complex;fullerene | null | null | 5hkn(1);5hkr(0.9951000214);3s0r(0.9774000049);6xy0(0.9986000061);4pn8(1) | null | 5hkr(49) | null | 5hkn(1) | null | null | null |
5ez8 | 2016-07-06 | other | id:A,B,C,D,E,F,G;type:U;source:unknown;length:31;seq_nat:XGEIAQALKEIAKALKEIAWACKEIAQALKG;seq_unnat:(ACE)GEIAQALKEIAKALKEIAWACKEIAQALKG | 3,226.848 | P 2 21 21 | 38.340|47.850|129.200|90.00|90.00|90.00 | X-RAY DIFFRACTION | null | A.J. Burton;A.R. Thomson;W.M. Dawson;R.L. Brady;D.N. Woolfson | "Installing hydrolytic activity into a completely de novo protein framework", Nat.Chem., 8, 837-844 | 10.1038/nchem.2555|27554410||1755-4349| | UK | A de novo designed heptameric coiled coil cc-hept-i-c-i | de novo protein;de novo assembly;coiled coil;heptamer | null | null | 7nfm(1);4pna(1);7bim(1);6xy1(1);7nfi(1);7nfj(1);7nfl(1);5ez9(1);7nff(1);8a09(1);4pn9(1);6eiz(0.9973000288);6g6e(1);6yb2(1);7nfn(1);7nfk(1);5eza(1);7nfo(1);8b16(1);5ezc(1);6zt1(1);7a1t(1);7nfg(1);6eik(1);6g6g(1);7bas(1);7bav(1);7qwa(1);5eze(1);7qwd(1);7qwe(1);6g6f(1);7nfh(1);7qwb(1);7nfp(1);6xxz(1);6xy0(1);9f5a(1);6yb0(... | null | 5ez8(0) | null | 7nfm(1) | null | 1.20.5.420;1.20.5.430;1.20.5.2620;1.20.5.770;1.20.5.1450;6.10.250.1140;1.20.5.700;6.10.250.500;6.10.250.2150;6.10.250.200;6.10.250.2720;6.10.250.270;6.10.250.2060;6.10.250.1090;1.20.5.3960;6.10.250.2370;6.10.250.1210;6.10.250.1020;6.10.250.1440;6.10.250.10;1.20.5.1610;6.10.250.850;6.10.250.490;6.10.250.380;1.20.5.110;1... | null |
5ez9 | 2016-07-06 | other | id:A,B,C,D,E,F,G;type:U;source:unknown;length:31;seq_nat:XGEIAKALREIAKALREIAWAHREIAKALRG;seq_unnat:(ACE)GEIAKALREIAKALREIAWAHREIAKALRG | 3,376.01 | I 1 2 1 | 62.400|63.030|70.122|90.00|108.40|90.00 | X-RAY DIFFRACTION | null | A.J. Burton;A.R. Thomson;W.M. Dawson;R.L. Brady;D.N. Woolfson | "Installing hydrolytic activity into a completely de novo protein framework", Nat.Chem., 8, 837-844 | 10.1038/nchem.2555|27554410||1755-4349| | UK | A de novo designed heptameric coiled coil cc-hept-i-h-i | de novo protein;de novo design;coiled coil;heptamer | null | null | 5ezc(1);7nfn(1);5eze(0.9990000129);6eik(1);5f2y(0.9562000036);5eza(1);5ez8(1);4pna(1);7bim(1);8a09(1);7nfk(1);4pn9(1);6eiz(1);7nfj(1);6zt1(1);7a1t(1);7bas(1);7nfl(1);7nfo(1);7qwb(1);7qwd(1);7qwe(1);8b15(0.9973000288);8b16(1);7nfp(1);6xy1(1);6g6f(1);7qwa(0.9991000295);7bav(1);7nfh(1);7nfm(1);6g6b(0.9957000017);7baw(1);6... | null | 5ez9(0) | null | 5ezc(1) | null | 6.10.250.770;1.20.5.420;1.20.5.430;1.20.5.2620;1.20.5.1450;6.10.250.1140;1.20.5.700;6.10.250.500;6.10.250.200;6.10.250.2150;6.10.250.880;6.10.250.270;1.20.5.3960;6.10.250.2060;6.10.250.1090;6.10.250.2370;6.10.250.2720;6.10.250.1210;6.10.250.1020;6.10.250.1440;6.10.250.10;1.20.5.1610;6.10.250.850;6.10.250.490;6.10.250.3... | null |
5eza | 2016-07-06 | other | id:A,B,C,D,E,F,G;type:U;source:unknown;length:31;seq_nat:XGEIAKALREIAKALRECAWAHREIAKALRG;seq_unnat:(ACE)GEIAKALREIAKALRECAWAHREIAKALRG | 3,365.995 | I 1 2 1 | 62.240|61.370|69.415|90.00|109.98|90.00 | X-RAY DIFFRACTION | null | A.J. Burton;A.R. Thomson;W.M. Dawson;R.L. Brady;D.N. Woolfson | "Installing hydrolytic activity into a completely de novo protein framework", Nat.Chem., 8, 837-844 | 10.1038/nchem.2555|27554410||1755-4349| | UK | A de novo designed heptameric coiled coil cc-hept-i18c-l22h | de novo protein;coiled coil;heptamer | null | null | 5ezc(1);5ez9(1);5eze(0.9575999975);7nfn(1);7nfp(1);6eik(0.9575999975);7nfo(0.9805999994);7nfm(1);5ez8(1);4pna(1);6xy1(1);8b16(1);7bim(1);8a09(0.9575999975);4pn9(0.9987999797);6eiz(0.9987999797);7nff(1);7nfi(1);7nfj(1);7nfl(1);7nfk(0.9575999975);6yb2(1);6g6e(1);6g6g(1);6xxz(1);6zt1(1);7a1t(1);7bas(1);7bav(1);7nfg(1);6yb... | null | 5eza(0) | null | 5ezc(1) | null | 6.10.250.770;1.20.5.420;1.20.5.430;1.20.5.2620;1.20.5.1450;6.10.250.1140;1.20.5.700;6.10.250.500;6.10.250.2150;6.10.250.200;6.10.250.880;6.10.250.2720;6.10.250.270;6.10.250.2060;6.10.250.1090;1.20.5.3960;6.10.250.2370;6.10.250.1210;6.10.250.1020;6.10.250.1440;6.10.250.10;1.20.5.1610;6.10.250.160;6.10.250.850;6.10.250.4... | null |
5ezc | 2016-07-06 | other | id:A,B,C,D,E,F,G;type:U;source:unknown;length:31;seq_nat:XGEIAKALREIAKALRECAWAHREEAKALRG;seq_unnat:(ACE)GEIAKALREIAKALRECAWAHREEAKALRG | 3,381.951 | I 1 2 1 | 62.252|60.880|69.380|90.00|110.89|90.00 | X-RAY DIFFRACTION | null | A.J. Burton;A.R. Thomson;W.M. Dawson;R.L. Brady;D.N. Woolfson | "Installing hydrolytic activity into a completely de novo protein framework", Nat.Chem., 8, 837-844 | 10.1038/nchem.2555|27554410||1755-4349| | UK | A de novo designed heptameric coiled coil cc-hept-i18c-l22h-i25e | de novo protein;coiled coil;heptamer | null | null | 5eza(1);5eze(1);5ez9(1);7nfn(1);6eik(1);7nfp(1);7nfo(1);7nfk(1);7nfl(1);7nfm(1);7nff(1);5ez8(1);4pna(1);6xy1(1);8b16(1);7bim(1);8a09(1);4pn9(1);6eiz(1);7nfj(1);6yb2(1);6g6f(1);6g6g(1);6zt1(1);7a1t(1);7nfi(1);7bas(1);7bav(1);7nfg(1);9f5a(0.9987000227);6yb0(0.9771999717);7qwb(1);7qwd(1);7qwe(1);6g6c(1);7qwa(1);6g6b(0.997... | null | 5ezc(0) | null | 5eza(1) | null | 6.10.250.770;1.20.5.420;1.20.5.430;1.20.5.2620;1.20.5.1450;6.10.250.1140;1.20.5.700;6.10.250.500;6.10.250.2150;6.10.250.200;6.10.250.880;1.20.5.3960;6.10.250.2720;6.10.250.2060;6.10.250.1090;6.10.250.2370;6.10.250.1210;6.10.250.1020;6.10.250.1440;6.10.250.10;1.20.5.1610;6.10.250.160;6.10.250.850;6.10.250.490;6.10.250.3... | null |
5eze | 2016-07-06 | other | id:A,B,C,D,E,F,G;type:U;source:unknown;length:31;seq_nat:XGEIAKALREIAKALRECAWAHREEAKALRG;seq_unnat:(ACE)GEIAKALREIAKALRE(CG6)AWAHREEAKALRG | 3,395.978 | I 1 2 1 | 62.450|60.490|68.812|90.00|112.43|90.00 | X-RAY DIFFRACTION | null | A.J. Burton;A.R. Thomson;W.M. Dawson;R.L. Brady;D.N. Woolfson | "Installing hydrolytic activity into a completely de novo protein framework", Nat.Chem., 8, 837-844 | 10.1038/nchem.2555|27554410||1755-4349| | UK | A de novo designed heptameric coiled coil cc-hept-i18betamecys-l22h-i25e | de novo structure;de novo protein;coiled coil;heptamer | null | null | 5f2y(1);5ezc(1);7nfn(1);5ez9(1);6eik(1);5eza(1);7nfk(1);6eiz(1);7nfo(1);5ez8(1);8b15(0.9880999923);4pna(1);7nfj(1);7nfl(1);7bim(1);7nfp(1);7bat(1);8a09(1);4pn9(1);8b16(1);6xy1(1);6g6f(1);6zt1(1);7bas(1);7nfh(1);7nfm(1);6g6b(0.9952999949);7a1t(1);7qwb(1);7qwe(1);7nff(1);7qwd(1);6g6a(0.9981999993);7baw(1);7qwa(1);7bav(1)... | null | 5eze(0) | null | 5ezc(1) | null | 6.10.250.1960;6.10.250.770;1.20.5.420;1.20.5.2620;1.20.5.1450;6.10.250.310;6.10.250.1560;1.20.5.700;6.10.250.500;6.10.250.200;6.10.250.2150;6.10.250.740;1.20.5.3960;6.10.250.2720;6.10.250.2060;6.10.250.1090;6.10.250.2370;6.10.250.1210;6.10.250.1020;6.10.250.400;6.10.250.1440;1.20.5.1610;6.10.250.850;6.10.250.490;6.10.2... | null |
5f2y | 2016-07-06 | other | id:A,B,C,D,E,F,G;type:U;source:unknown;length:31;seq_nat:XGEIAKALREIAKALREXAWAHREEAKALRG;seq_unnat:(ACE)GEIAKALREIAKALRE(HCS)AWAHREEAKALRG | 3,395.978 | I 1 2 1 | 62.250|61.980|68.710|90.00|110.92|90.00 | X-RAY DIFFRACTION | null | A.J. Burton;A.R. Thomson;W.M. Dawson;R.L. Brady;D.N. Woolfson | "Installing hydrolytic activity into a completely de novo protein framework", Nat.Chem., 8, 837-844 | 10.1038/nchem.2555|27554410||1755-4349| | UK | A de novo designed heptameric coiled coil cc-hept-homocys-h-e | de novo protein;de novo design;coiled coil;heptamer | null | null | 5ezc(1);7nfn(0.9984999895);5eza(0.9983999729);6eik(1);5ez8(0.9984999895);7nfp(0.9983999729);4pna(0.9984999895);7bim(0.9904000163);7nfk(0.9937999845);7nfj(0.9984999895);7nfl(0.9984999895);7nfo(1);7nfm(0.9970999956);8b15(0.9923999906);7nff(0.9984999895);6g6f(0.9962999821);6xy1(0.9919999838);7qwb(0.9965000153);6g6e(0.9984... | null | 5f2y(0) | null | 6eik(1) | null | 6.10.250.770;6.10.250.1960;1.20.5.420;1.20.5.2620;1.20.5.1450;6.10.250.310;1.20.5.570;6.10.250.1560;1.20.5.700;6.10.250.500;6.10.250.200;6.10.250.2150;6.10.250.740;1.20.5.3960;6.10.250.2060;6.10.250.1090;6.10.250.2370;6.10.250.1210;6.10.250.1020;6.10.250.400;6.10.250.1440;1.20.5.1610;6.10.250.850;6.10.250.490;6.10.250.... | null |
5f53 | 2016-12-14 | other | id:A;type:U;source:unknown;length:88;seq_nat:GSHMFTGLNTPSGVAVDSAGTVYVTDHGNNRVVKLAAGSNTQTVLPFTGLNTPSGVAVDSAGTVYVTDHGNNRVVKLAAGSNTQTVL;seq_unnat:GSHMFTGLNTPSGVAVDSAGTVYVTDHGNNRVVKLAAGSNTQTVLPFTGLNTPSGVAVDSAGTVYVTDHGNNRVVKLAAGSNTQTVL | 8,763.629 | I 41 3 2 | 110.320|110.320|110.320|90.00|90.00|90.00 | X-RAY DIFFRACTION | null | A.R.D. Voet;D. Terada;H. Noguchi;C. Addy;S. Unzai;S. Akashi;K.Y.J. Zhang;J.R.H. Tame | To be published | |||| | null | Nano-ring of cadmium ions coordinated by nvpizza2-s16s58 | computational protein design;de novo protein;self-assembly;metal coordination complex | 4zcn(174);5i1z(173);5i1y(173);5chb(172);6i37(169);6reh(166);6qsf(166);6rei(166);7ov7(166);6qsg(166);6qsh(166);6reg(166);6qsd(166);6qse(166);6f0t(165);6rej(164);6rek(164);6rem(164);6f0s(164);6rel(164);7zq2(163);7zqg(163);7zcj(163);6i38(161);6f0q(161);7zpz(161);6i3b(160);6i39(160);6i3a(160);7zpw(160);7zph(158);6reo(156);... | 1rwi(123);1rwl(123) | 4zcn(0.983799994);5i1z(0.9865999818);5chb(0.9718999863);5i1y(0.9801999927);3ww8(0.9790999889);6f0t(0.9794999957);6rei(0.983099997);6qsg(0.9855999947);6f0q(0.9693999887);6i3b(0.966899991);7zpw(0.9866999984);6reg(0.981400013);7zqg(0.9774000049);7ov7(0.9704999924);6rel(0.9702000022);6qsd(0.9811999798);6qse(0.959100008);6r... | null | 4zcn(174) | 1rwi(123) | 7zpw(0.9866999984) | 1rwi(0.9463999867) | 2.40.10.500;2.40.128.190;2.40.10.360;2.20.25.650;2.30.30.660 | null |
5gaj | 2016-01-06 | other | id:A;type:D;source:synthetic construct;length:135;seq_nat:MGTVVIVVSRDERILEELLEVVLKSDPNVKTVRTDDKEKVKEEIEKARKQGRPIVIFIRGATEEVVRDIVEYAQKEGLRVLVIMVDQDQEELERIYEQLKKDGVDVRVTDNEDEAKKRLKELLEKVLEHHHHHH;seq_unnat:MGTVVIVVSRDERILEELLEVVLKSDPNVKTVRTDDKEKVKEEIEKARKQGRPIVIFIRGATEEVVRDIVEYAQKEGLRVLVIMVDQDQEELERIYEQLKKDGVDVRVTDNEDEAKK... | 15,769.068 | null | ||||| | SOLUTION NMR | null | G. Liu;G.T. Montelione | To be published | |||| | null | Solution nmr structure of de novo designed ploop2x3_50 fold protein, northeast structural genomics consortium (nesg) target or258 | de novo protein;nesg;northeast structural genomics consortium;psi-biology | 2mr5(229);2mr6(166);2l82(64);2lvb(57);2lnd(57) | 4j29(247) | null | null | 2mr5(229) | 4j29(247) | 2mr6(0.7207000256) | 4j29(0.5831000209) | 3.40.50.11960;3.40.50.9100;3.40.50.11900;3.40.50.10350;3.40.50.700;3.40.50.11400;3.40.50.1860;3.40.50.960;3.40.50.720;3.40.50.11130;3.40.50.10330;3.40.50.2300;3.40.50.1970;3.40.50.360;3.40.50.10140;3.40.50.450;3.40.50.10830;3.40.50.10190;3.40.50.300;3.40.50.10740;3.40.50.10090;3.40.50.1980;3.40.50.11230;3.40.50.20;3.40... | null |
5h7c | 2017-06-28 | other | id:A,C;type:N;source:Staphylococcus aureus;length:409;seq_nat:GSHMKFNKEQQNAFYEILHLPNLNEEQRNAFIQSLKDDPSQSANLLAEAKSLNVNQAVKQLAEKAKEATDKEEVIEIVKELAELAKQSTDSELVNEIVKQLAEVAKEATDKELVIYIVKILAELAKQSTDSELVNEIVKQLAEVAKEATDKELVIYIVKILAELAKQSTDSELVNEIVKQLEEVAKEATDKELVEHIEKILEELEQQSAFYEILSLPNLNEEQRNAFIQSLKDDPSQSANLLAEAKSLNVNQAVKQLA... | 45,366.309 | P 1 | 48.658|75.528|80.013|84.19|83.72|75.21 | X-RAY DIFFRACTION | null | S.J. Youn;N.Y. Kwon;J.H. Lee;J.H. Kim;J. Choi;H. Lee;J.O. Lee | "Construction of novel repeat proteins with rigid and predictable structures using a shared helix method", Sci Rep, 7, 2595-2595 | 10.1038/s41598-017-02803-z|28572639||2045-2322| | UK | Crystal structure of a repeat protein with two protein a-dhr14 repeat modules | de novo protein;immune system, de novo protein;synthetic protein;immune system | null | null | null | null | null | null | null | null | null | null |
5hkn | 2016-05-04 | other | id:A,B;type:U;source:unknown;length:30;seq_nat:AEAESALEYAQQALEKAQLALQAARQALKA;seq_unnat:AEAESALEYAQQALEKAQLALQAARQALKA | 3,188.565 | P 62 | 41.710|41.710|67.230|90.00|90.00|120.00 | X-RAY DIFFRACTION | null | K.H. Kim;D.K. Ko;Y.T. Kim;N.H. Kim;J. Paul;S.Q. Zhang;C.B. Murray;R. Acharya;W.F. DeGrado;Y.H. Kim;G. Grigoryan | "Protein-directed self-assembly of a fullerene crystal", Nat Commun, 7, 11429-11429 | 10.1038/ncomms11429|27113637||2041-1723| | UK | Crystal structure de novo designed fullerene organizing protein complex with fullerene | de novo protein design;fullerene protein complex;de novo protein | null | null | 5et3(1);5hkr(0.9961000085);3s0r(0.983099997);6xy0(1);4pn8(1) | null | 5hkr(49) | null | 5et3(1) | null | 6.10.250.1090;1.20.5.510;1.20.5.420;6.10.250.1100;1.20.5.460;1.20.5.740;1.20.5.170;6.10.250.270;1.20.5.100;1.20.5.110;1.20.5.140 | null |
5hkr | 2016-05-04 | other | id:A,B;type:U;source:unknown;length:30;seq_nat:AEAESALEYAQQALEKAQLALQAARQALKA;seq_unnat:AEAESALEYAQQALEKAQLALQAARQALKA | 3,188.565 | P 62 | 41.713|41.713|66.808|90.00|90.00|120.00 | X-RAY DIFFRACTION | null | K.H. Kim;D.K. Ko;Y.T. Kim;N.H. Kim;J. Paul;S.Q. Zhang;C.B. Murray;R. Acharya;W.F. DeGrado;Y.H. Kim;G. Grigoryan | "Protein-directed self-assembly of a fullerene crystal", Nat Commun, 7, 11429-11429 | 10.1038/ncomms11429|27113637||2041-1723| | UK | Crystal structure of de novo designed fullerene organising protein complex with fullerene | de novo protein design;fullerene protein complex;de novo protein | null | null | 5hkn(0.9962000251);5et3(0.9951000214);3s0r(0.9610000253);6xy0(0.992299974);4pn8(0.9980999827) | null | 5hkn(49) | null | 4pn8(0.9980999827) | null | null | null |
5hpn | 2016-04-06 | other | id:A,B,C,D,E;type:D;source:synthetic construct;length:91;seq_nat:GKAVHVIPRPHTDVEKILGGSGGSEALGMVETKGLTAAIEAADAMVASANVMLVGYEKIGSGLVTVIVRGDVGAVKAATDAGAAAARNVG;seq_unnat:GKAVHVIPRPHTDVEKILGGSGGSEALGMVETKGLTAAIEAADAMVASANVMLVGYEKIGSGLVTVIVRGDVGAVKAATDAGAAAARNVG | 8,778.06 | P 42 3 2 | 144.500|144.500|144.500|90.00|90.00|90.00 | X-RAY DIFFRACTION | null | J. Jorda;D.J. Leibly;M.C. Thompson;T.O. Yeates | "Structure of a novel 13 nm dodecahedral nanocage assembled from a redesigned bacterial microcompartment shell protein", Chem.Commun.(Camb.), 52, 5041-5044 | 10.1039/c6cc00851h|26988700||1364-548X| | UK | A circularly permuted pdua forming an icosahedral cage | pdua;bmc;protein design;icosahedron;mcp;design;cage;de novo protein;microcompartment | null | 4rbu(118);4ppd(118);4p2s(118);3ngk(118);4p7t(118);4p7v(118);4qif(117);4qie(117);4rbt(116);4qig(116);4rbv(112);4axj(92);4qiv(90);3mpw(82);3mpy(82);3i6p(82);5djb(79);3cim(79);3dnc(79);2a1b(79);4liw(78);4ox7(78);3ssq(78);3ssr(76);3dn9(74);3bn4(74);4ox8(74);3sss(73);9gw1(72);2g13(72);2ewh(72);9gvc(72);3h8y(72);4ox6(61);2a1... | null | null | 5hpn(0) | 4rbu(118) | 8t6n(0.7096999884) | 4p7t(0.8542000055) | 3.30.70.1800;3.30.1360.20;3.30.70.2860;3.30.70.80;3.30.1360.10;6.10.250.1560;3.30.70.870;3.30.1370.10;3.30.70.250;3.30.1360.40;3.30.70.600;3.30.70.2750;3.30.70.330;3.30.70.2370;3.30.70.360;3.30.70.1450;3.30.310.50;3.30.70.100;6.10.250.1110;3.30.70.120;3.30.70.920;3.30.70.260;3.30.70.3090;3.30.30.180;3.30.70.1070;3.30.1... | null |
5hry | 2017-04-12 | other | id:A,B,C,D,E,F,G,H;type:D;source:synthetic construct;length:171;seq_nat:MSELGKRLIEAAENGNKDRVKDLLENGADVNASDSDGKTPLHLAAENGHAKVVLLLLEQGADPNAKDSDGKTPLHLAAENGHAVVVALLLMHGADPNAKDSDGKTPLHLAAENGHEEVVILLLAMGADPNTSDSDGRTPLDLAREHGNEEVVKVLEDHGGWLEHHHHHH;seq_unnat:MSELGKRLIEAAENGNKDRVKDLLENGADVNASDSDGKTPLHLAAENGHAKVVLLLLEQGADPNAKDS... | 18,012.885 | P 21 21 21 | 106.350|106.180|106.620|90.00|90.00|90.00 | X-RAY DIFFRACTION | null | J.A. Fallas;G. Ueda;W. Sheffler;V. Nguyen;D.E. McNamara;B. Sankaran;J.H. Pereira;F. Parmeggiani;T.J. Brunette;D. Cascio;T.R. Yeates;P. Zwart;D. Baker | "Computational design of self-assembling cyclic protein homo-oligomers", Nat Chem, 9, 353-360 | 10.1038/nchem.2673|28338692||1755-4349| | UK | Computationally designed cyclic dimer ank3c2_1 | designed oligomeric interface;protein design;de novo protein | 4gmr(313);4hb5(301);4gpm(287);4hqd(279);5kba(261);5hs0(241);5eil(237);2xee(190);4qfv(189);2xeh(186);7z71(180);7b4t(180);9s60(180);4j7w(179);4j8y(179);8v9o(179);8ve7(178);9g8i(177);6fpa(177);6fpb(177);6fp9(177);4o60(177);6c9k(177);7z7e(176);7z7c(176);5le9(176);7b4w(175);2bkg(175);5kng(175);5knh(175);9gtk(175);7ujj(175);... | 4k5a(187);4hll(184);4zfh(182);3zu7(181);4hrm(181);2p2c(179);4hrl(177);3noc(175);5fin(173);5fio(173);4jb8(172);5aq8(172);5enr(171);5nc5(171);4dx6(171);4u96(171);5ens(171);4dx7(171);4u8v(171);5en5(171);5jmn(171);9fhc(171);5ent(171);4u8y(171);5eno(171);2j8s(171);5enp(171);9fhg(171);4f6r(171);9fhj(171);3nog(171);4hna(171);... | 4gmr(0.9803000093);4hb5(0.9526000023);7z7c(0.9617999792);5kba(0.9631999731);4gpm(0.9535999894);5eil(0.9510999918);5hs0(0.9528999925);7z7e(0.9534999728);9gtk(0.9549000263);2xee(0.9535999894);7z71(0.951399982);6fpa(0.9524999857);6fpb(0.9571999907);6fp9(0.950600028) | 4k5a(0.9573000073) | 4gmr(313) | 4k5a(187) | 4gmr(0.9803000093) | 4k5a(0.9573000073) | 1.10.10.2400;1.25.40.70;1.10.220.10;1.25.40.20;1.25.40.850 | null |
5hrz | 2017-04-12 | other | id:A;type:D;source:synthetic construct;length:129;seq_nat:MNLAEKMYKAGNAMYRKGQYTIAIIAYTLALLKDPNNAEAWYNLGNAAYKKGEYDEAIEAYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQKQGLEHHHHHH;seq_unnat:MNLAEKMYKAGNAMYRKGQYTIAIIAYTLALLKDPNNAEAWYNLGNAAYKKGEYDEAIEAYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQKQGLEH... | 14,705.2 | H 3 2 | 83.570|83.570|141.930|90.000|90.000|120.000 | X-RAY DIFFRACTION | null | J.A. Fallas;G. Ueda;W. Sheffler;V. Nguyen;D.E. McNamara;B. Sankaran;J.H. Pereira;F. Parmeggiani;T.J. Brunette;D. Cascio;T.R. Yeates;P. Zwart;D. Baker | "Computational design of self-assembling cyclic protein homo-oligomers", Nat Chem, 9, 353-360 | 10.1038/nchem.2673|28338692||1755-4349| | UK | Computationally designed trimer 1na0c3_3 | designed oligomeric interface;protein design;de novo protein | 6vl6(229);6v8e(200);6vfj(192);2wqh(188);6vfh(185);6vfk(185);8ckr(184);8chy(184);8ot7(184);8cqq(184);8cp8(184);8cmq(184);8cqp(184);8cig(184);8bu0(184);6vfi(182);8umr(181);8ump(181);8ch0(179);8fwd(134);8far(91);8cwz(85);8cut(85);8cus(85) | 9gzg(147);4eqf(58);2dba(52) | 6v8e(0.9697999954);6vfk(0.9584000111);6vfh(0.9656000137);8ump(0.9636999965) | null | 6vl6(229) | 9gzg(147) | 6v8e(0.9697999954) | 2vyi(0.9156000018) | 1.25.40.440;1.20.5.420;1.10.189.10;6.10.140.730;1.20.58.2200;1.25.40.850;1.25.40.10;6.10.250.3030;6.10.140.270;1.10.1240.70;1.20.58.290;1.25.40.1040;1.10.10.1270 | null |
5hs0 | 2017-04-12 | other | id:A,B;type:D;source:synthetic construct;length:168;seq_nat:MSEDGELLILAAELGIAEAVRMLIEQGADVNASDDDGRTPLHHAAENGHLAVVLLLLLKGADVNAKDSDGRTPLHHAAENGHKTVVLLLILMGADVNAKDSDGRTPLHHAAENGHKEVVKLLIRKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQLEHHHHHH;seq_unnat:MSEDGELLILAAELGIAEAVRMLIEQGADVNASDDDGRTPLHHAAENGHLAVVLLLLLKGADVNAKDSDGRTPLHHAAENGHK... | 17,938.111 | P 65 2 2 | 110.450|110.450|182.810|90.000|90.000|120.000 | X-RAY DIFFRACTION | null | J.A. Fallas;G. Ueda;W. Sheffler;V. Nguyen;D.E. McNamara;B. Sankaran;J.H. Pereira;F. Parmeggiani;T.J. Brunette;D. Cascio;T.R. Yeates;P. Zwart;D. Baker | "Computational design of self-assembling cyclic protein homo-oligomers", Nat Chem, 9, 353-360 | 10.1038/nchem.2673|28338692||1755-4349| | UK | Computationally designed cyclic tetramer ank1c4_7 | designed oligomeric interface;protein design;de novo protein | 4gpm(280);4hqd(262);4hb5(261);5kba(254);4gmr(250);5eil(242);5hry(237);4qfv(199);4o60(190);2xee(178);2xeh(174);7z71(169);9s60(168);6fpa(166);6fpb(166);4j7w(166);8v9o(165);7z7e(164);7b4w(164);4j8y(164);6c9k(164);5le9(164);7b4t(163);9gtk(163);6fp9(163);9epa(162);9fe1(162);8ve7(162);9g8i(161);7zyu(161);7z7c(161);5lea(161);... | 4k5a(171);3zu7(167);4hll(167);4zfh(166);4hrl(163);2p2c(162);3noc(162);4hrm(162);4jb8(160);5fin(160);5fio(160);4ydy(158);4f6r(158);3nog(158);4hna(158);5aq9(157);5aq8(157);5enr(156);5nc5(156);4dx6(156);4u96(156);5ens(156);4dx7(156);4u8v(156);5en5(156);5jmn(156);9fhc(156);5ent(156);4u8y(156);5eno(156);2j8s(156);2y1l(156);... | 4gpm(0.9797000289);5kba(0.9735999703);6fpb(0.9542999864);7z71(0.950600028);5lea(0.9531999826);5le7(0.9555000067);5eil(0.9527000189);7b4w(0.9502999783);5kng(0.9527999759) | null | 4gpm(280) | 4k5a(171) | 4gpm(0.9797000289) | 5fin(0.9455999732) | 1.25.40.750;1.10.10.2400;1.25.40.70;1.10.220.10;1.25.10.10;1.25.40.580;1.25.40.180;1.25.40.320;1.25.40.850;1.25.40.20 | null |
5i1y | 2017-02-08 | other | id:A,B,C;type:D;source:synthetic construct;length:88;seq_nat:GSHMFTGLNTPHGVAVDSAGTVYVTDHGNNRVVKLAAGSNTQTVLPFTGLNTPSGVAVDSAGTVYVTDHGNNRVVKLAAGSNTQTVL;seq_unnat:GSHMFTGLNTPHGVAVDSAGTVYVTDHGNNRVVKLAAGSNTQTVLPFTGLNTPSGVAVDSAGTVYVTDHGNNRVVKLAAGSNTQTVL | 8,814.698 | P 61 2 2 | 69.453|69.453|187.264|90.00|90.00|120.00 | X-RAY DIFFRACTION | null | J.R.H. Tame;A.R.D. Voet | To be published | |||| | null | Nvpizza2-h16s58 with cobalt | domain swapping;artificial;de novo protein;symmetrical homo-oligomer;strand exchange | 5i1z(177);4zcn(172);5f53(172);5chb(170);6i37(167);6rej(167);6rek(167);6rem(167);6rel(167);6reh(164);6qsf(164);6rei(164);7ov7(164);6qsg(164);6qsh(164);6reg(164);6qsd(164);6qse(164);6f0t(163);7zcj(163);6f0s(162);7zq2(161);7zqg(161);6i38(159);6f0q(159);7zpz(159);6i3b(158);6i39(158);6i3a(158);7zpw(158);6reo(158);6rlh(158);... | 1rwi(123);1rwl(123) | 4zcn(0.972299993);5i1z(0.9914000034);5f53(0.9743999839);5chb(0.9653999805);6f0t(0.9764000177);7zpw(0.9796000123);6qsg(0.9787999988);3ww8(0.9679999948);6reg(0.9667000175);7ov7(0.9732000232);6rei(0.9743000269);6reh(0.976000011);6qsd(0.9764999747);6rel(0.9628000259);6ren(0.9710999727);6rej(0.9686999917);6rli(0.976000011);... | null | 5i1z(177) | 1rwi(123) | 5i1z(0.9914000034) | 1rwi(0.9394999743) | 2.40.10.500;2.40.128.190;2.40.10.360;2.20.25.650;2.20.25.10;2.30.30.660 | null |
5i1z | 2017-02-08 | other | id:A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R;type:D;source:synthetic construct;length:88;seq_nat:GSHMFTGLNTPHGVAVDSAGTVYVTDHGNNRVVKLAAGSNTQTVLPFTGLNTPSGVAVDSAGTVYVTDHGNNRVVKLAAGSNTQTVL;seq_unnat:GSHMFTGLNTPHGVAVDSAGTVYVTDHGNNRVVKLAAGSNTQTVLPFTGLNTPSGVAVDSAGTVYVTDHGNNRVVKLAAGSNTQTVL | 8,814.698 | P 21 21 2 | 121.350|189.776|69.841|90.00|90.00|90.00 | X-RAY DIFFRACTION | null | J.R.H. Tame;A.R.D. Voet;C. Addy;D. Terada;K.Y.J. Zhang;S.-I. Sekine;S. Unzai;R. Kawano;S.Y. Park | To be published | |||| | null | Structure of nvpizza2-h16s58 | domain swapping;artificial;de novo protein;symmetrical homo-oligomer;strand exchange | 5i1y(177);4zcn(172);5f53(172);5chb(170);6i37(167);6rej(167);6rek(167);6rem(167);6rel(167);6reh(164);6qsf(164);6rei(164);7ov7(164);6qsg(164);6qsh(164);6reg(164);6qsd(164);6qse(164);6f0t(163);7zcj(163);6f0s(162);7zq2(161);7zqg(161);6i38(159);6f0q(159);7zpz(159);6i3b(158);6i39(158);6i3a(158);7zpw(158);6reo(158);6rlh(158);... | 1rwi(123);1rwl(123) | 5i1y(0.9961000085);6qse(0.9822000265);7zcj(0.9542999864);6f0s(0.954400003);6i38(0.956799984);6i3a(0.9593999982);6qsf(0.9629999995);3wwa(0.9549999833);4zcn(0.9746999741);5chb(0.9725999832);5f53(0.9790999889);3ww8(0.9656000137);6f0t(0.9682999849);6qsg(0.9811000228);6reg(0.9790999889);6rei(0.978399992);6rel(0.9646000266);... | null | 5i1y(177) | 1rwi(123) | 5i1y(0.9961000085) | 1rwi(0.9384999871) | 2.40.10.500;2.40.128.190;2.40.10.360;2.20.25.650;2.20.25.10;2.30.30.660 | null |
5i9d | 2016-04-27 | other | id:A;type:D;source:synthetic construct;length:465;seq_nat:ALLDETPLPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVV... | 51,462.609 | P 21 21 21 | 52.546|84.904|95.899|90.00|90.00|90.00 | X-RAY DIFFRACTION | null | C. Shen;D. Zhang;Z. Guan;Y. Liu;Z. Yang;Y. Yang;X. Wang;Q. Wang;Q. Zhang;S. Fan;T. Zou;P. Yin | "Structural basis for specific single-stranded RNA recognition by designer pentatricopeptide repeat proteins", Nat Commun, 7, 11285-11285 | 10.1038/ncomms11285|27088764||2041-1723| | UK | Crystal structure of designed pentatricopeptide repeat protein dppr-u8a2 in complex with its target rna u8a2 | designer pentatricopeptide repeat protein;rna binding protein/rna;single-stranded rna;rna binding protein-rna complex;rna binding protein | null | null | null | null | 5i9d(0) | null | null | null | null | 2024-10-06: Confirm chain A to be de novo designed rather than unknown;2024-10-06: Confirm chain B to be RNA rather than de novo designed |
5i9f | 2016-04-27 | other | id:A;type:U;source:unknown;length:465;seq_nat:ALLDETPLPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKA... | 51,518.629 | P 21 21 21 | 52.732|85.266|95.104|90.00|90.00|90.00 | X-RAY DIFFRACTION | null | C. Shen;D. Zhang;Z. Guan;Y. Liu;Z. Yang;Y. Yang;X. Wang;Q. Wang;Q. Zhang;S. Fan;T. Zou;P. Yin | "Structural basis for specific single-stranded RNA recognition by designer pentatricopeptide repeat proteins", Nat Commun, 7, 11285-11285 | 10.1038/ncomms11285|27088764||2041-1723| | UK | Crystal structure of designed pentatricopeptide repeat protein dppr-u10 in complex with its target rna u10 | single-stranded rna;designer pentatricopeptide repeat protein;rna binding protein-rna complex;rna binding protein/rna | null | null | null | null | 5i9f(0) | null | null | null | null | null |
5i9g | 2016-04-27 | other | id:C;type:U;source:unknown;length:465;seq_nat:ALLDETPLPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKA... | 51,462.609 | P 21 21 21 | 51.433|84.782|94.358|90.00|90.00|90.00 | X-RAY DIFFRACTION | null | C. Shen;D. Zhang;Z. Guan;Y. Liu;Z. Yang;Y. Yang;X. Wang;Q. Wang;Q. Zhang;S. Fan;T. Zou;P. Yin | "Structural basis for specific single-stranded RNA recognition by designer pentatricopeptide repeat proteins", Nat Commun, 7, 11285-11285 | 10.1038/ncomms11285|27088764||2041-1723| | UK | Crystal structure of designed pentatricopeptide repeat protein dppr-u8c2 in complex with its target rna u8c2 | single-stranded rna;designer pentatricopeptide repeat protein;rna binding protein-rna complex;rna binding protein/rna | null | null | null | null | 5i9g(0) | null | null | null | null | null |
5i9h | 2016-04-27 | other | id:A;type:U;source:unknown;length:465;seq_nat:ALLDETPLPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKA... | 51,492.633 | P 21 21 21 | 52.063|85.098|95.397|90.00|90.00|90.00 | X-RAY DIFFRACTION | null | C. Shen;D. Zhang;Z. Guan;Y. Liu;Z. Yang;Y. Yang;X. Wang;Q. Wang;Q. Zhang;S. Fan;T. Zou;P. Yin | "Structural basis for specific single-stranded RNA recognition by designer pentatricopeptide repeat proteins", Nat Commun, 7, 11285-11285 | 10.1038/ncomms11285|27088764||2041-1723| | UK | Crystal structure of designed pentatricopeptide repeat protein dppr-u8g2 in complex with its target rna u8g2 | single-stranded rna;designer pentatricopeptide repeat protein;rna binding protein-rna complex;rna binding protein/rna | null | null | null | null | 5i9h(0) | null | null | null | null | null |
5ien | 2017-03-01 | other | id:A,B;type:D;source:synthetic construct;length:138;seq_nat:GQSAKEAIEAALADFVKAYNSKDAAGVASKYMDDAAIFPLDMARVDGRQNIQKLWQGLMDMGVSEPKLTTLDVQESGDFAFESGSISLKGPGKDSKLVDIAGKYVEVWRKGQDGGWKLYRTIANLDPAKLEHHHHHH;seq_unnat:GQSAKEAIEAALADFVKAYNSKDAAGVASKYMDDAAIFPLDMARVDGRQNIQKLWQGLMDMGVSEPKLTTLDVQESGDFAFESGSISLKGPGKDSKLVDIAGKYVEVWRKGQ... | 15,061.948 | P 21 21 21 | 48.831|60.415|93.942|90.000|90.000|90.000 | X-RAY DIFFRACTION | null | A.L. Day;P. Greisen;L. Doyle;A. Schena;N. Stella;K. Johnsson;D. Baker;B. Stoddard | "Unintended specificity of an engineered ligand-binding protein facilitated by unpredicted plasticity of the protein fold", Protein Eng.Des.Sel., 31, 375-387 | 10.1093/protein/gzy031|30566669||1741-0134| | UK | Structure of cdl2.2, a computationally designed vitamin-d3 binder | de novo protein;structural genomics;ligand binder;rossetta;computational | 5iep(267);5ieo(264) | 3hx8(231) | null | null | 5iep(267) | 3hx8(231) | 5iep(0.9254999757) | 3hx8(0.885800004) | 3.10.450.540;3.10.450.280;3.10.450.100;3.10.450.40;3.10.450.10;3.10.450.230;3.10.450.50 | null |
5ieo | 2017-03-01 | other | id:A;type:D;source:synthetic construct;length:138;seq_nat:LPTAHEAIEAALADFVKVYNSKDAAGVASKYMDDAVIFPLDMARVDGRQNIQKLWQGLMDMGVSEPKFTTLNVQESGDFAFESGSFSLKGPGKDSKLVDIAGIYVEVWRKGQDGGWKLYRTIANLDPARLEHHHHHH;seq_unnat:LPTAHEAIEAALADFVKVYNSKDAAGVASKYMDDAVIFPLDMARVDGRQNIQKLWQGLMDMGVSEPKFTTLNVQESGDFAFESGSFSLKGPGKDSKLVDIAGIYVEVWRKGQDG... | 15,245.181 | P 41 21 2 | 71.132|71.132|62.119|90.000|90.000|90.000 | X-RAY DIFFRACTION | null | A.L. Day;P. Greisen;L. Doyle;A. Schena;N. Stella;K. Johnsson;D. Baker;B. Stoddard | "Unintended specificity of an engineered ligand-binding protein facilitated by unpredicted plasticity of the protein fold", Protein Eng.Des.Sel., 31, 375-387 | 10.1093/protein/gzy031|30566669||1741-0134| | UK | Structure of cdl2.3a, a computationally designed vitamin-d3 binder | de novo protein;structural genomics;ligand binder;rossetta;computational | 5iep(270);5ien(262) | 3hx8(215) | 5iep(0.9771999717) | null | 5iep(270) | 3hx8(215) | 5iep(0.9771999717) | 3hx8(0.8887000084) | 6.10.250.770;1.20.5.420;4.10.810.10;1.20.5.3070;4.10.910.10;6.10.140.280;6.10.250.500;6.10.250.200;6.10.250.740;1.20.5.3960;6.10.250.2060;6.10.250.1090;6.10.250.2370;1.10.168.10;1.20.5.110;6.10.250.2120;3.10.450.530;1.20.5.460;1.20.5.740;6.10.250.2970;6.10.250.3130;1.20.5.100;6.10.250.2270;6.10.250.1120;1.20.5.510;6.10... | null |
5iep | 2017-03-01 | other | id:A;type:D;source:synthetic construct;length:138;seq_nat:DQSAKEAIEAALADFVKVYNSKDAAGVASKYMDDAAIFPLDMAPVDGRQNIQKLWQGLMDMGVSEPKFTTLNVQKSGDFAFESGSFSLKGPGKDSKLVDIAGIYVEVWRKGQDGGWKLYRTIANLDPAKLEHHHHHH;seq_unnat:DQSAKEAIEAALADFVKVYNSKDAAGVASKYMDDAAIFPLDMAPVDGRQNIQKLWQGLMDMGVSEPKFTTLNVQKSGDFAFESGSFSLKGPGKDSKLVDIAGIYVEVWRKGQDG... | 15,139.052 | P 41 21 2 | 71.848|71.848|60.787|90.000|90.000|90.000 | X-RAY DIFFRACTION | null | A.L. Day;P. Greisen;L. Doyle;A. Schena;N. Stella;K. Johnsson;D. Baker;B. Stoddard | "Unintended specificity of an engineered ligand-binding protein facilitated by unpredicted plasticity of the protein fold", Protein Eng.Des.Sel., 31, 375-387 | 10.1093/protein/gzy031|30566669||1741-0134| | UK | Structure of cdl2.3b, a computationally designed vitamin-d3 binder | de novo protein;structural genomics;ligand binder;rossetta;computational | 5ieo(271);5ien(266) | 3hx8(219) | 5ien(0.9549000263);5ieo(0.9648000002) | null | 5ieo(271) | 3hx8(219) | 5ieo(0.9648000002) | 3hx8(0.9117000103) | 3.10.450.540;3.10.450.280;3.10.450.100;3.10.450.40;3.10.450.10;3.10.450.230;3.10.450.50 | null |
5ier | 2017-03-01 | other | id:A,B,C,D;type:D;source:synthetic construct;length:133;seq_nat:TQSPALIASQSLWRCTQAHDREGWLALMADDVVIETPIGKSVTNPDGSGIKGKEAVGAFFDTHIAATRLTVTCEETFPSSSPDEIAHILVAHSEFDGGFTSEVRGVFTYRVNKAGLITNLRGYWNLDMMTFG;seq_unnat:TQSPALIASQSLWRCTQAHDREGWLALMADDVVIETPIGKSVTNPDGSGIKGKEAVGAFFDTHIAATRLTVTCEETFPSSSPDEIAHILVAHSEFDGGFTSEVRGVFTYRVNK... | 14,364.079 | P 31 2 1 | 78.832|78.832|184.478|90.000|90.000|120.000 | X-RAY DIFFRACTION | null | J. Dou;L. Doyle;P. Jr Greisen;A. Schena;H. Park;K. Johnsson;B.L. Stoddard;D. Baker | "Sampling and energy evaluation challenges in ligand binding protein design", Protein Sci., 26, 2426-2437 | 10.1002/pro.3317|28980354|0795|1469-896X|PRCIEI | US | Structure of a computationally designed 17-ohp binder | de novo protein;structural genomics;ligand binder;rossetta;computational | 5if6(256) | 2z77(265);2z7a(265);2a15(265);2z76(265) | 5if6(0.9690999985) | 2z7a(0.969900012);2z77(0.9542000294) | 5if6(256) | 2z77(265) | 5if6(0.9690999985) | 2z7a(0.969900012) | 3.10.450.540;3.10.450.280;3.10.450.100;3.10.450.10;3.10.450.230;3.10.450.50 | null |
5if6 | 2017-03-01 | other | id:A,B,C,D,E,F;type:D;source:synthetic construct;length:135;seq_nat:TQSPALIASQSLGRCTQAKDREGWLALMADDVVIETPIGKSVTNPDGSGIKGKEAVGAFWDTHIADDRVTVTCEETFPSSSPDEIAHILVAHAEFDGGFTSEVRGVFTYRVNKAGLITNLRGYYNLDMMTFGNQ;seq_unnat:TQSPALIASQSLGRCTQAKDREGWLALMADDVVIETPIGKSVTNPDGSGIKGKEAVGAFWDTHIADDRVTVTCEETFPSSSPDEIAHILVAHAEFDGGFTSEVRGVF... | 14,512.154 | P 21 21 21 | 80.020|100.787|118.154|90.000|90.000|90.000 | X-RAY DIFFRACTION | null | J. Dou;L. Doyle;P. Jr Greisen;A. Schena;H. Park;K. Johnsson;B.L. Stoddard;D. Baker | "Sampling and energy evaluation challenges in ligand binding protein design", Protein Sci., 26, 2426-2437 | 10.1002/pro.3317|28980354|0795|1469-896X|PRCIEI | US | Structure of a computationally designed 17-ohp binder | de novo protein;structural genomics;ligand binder;rossetta;computational | 5ier(258) | 2z77(251);2z7a(251);2a15(251);2z76(251) | 5ier(0.9574000239) | null | 5ier(258) | 2z77(251) | 5ier(0.9574000239) | 2z77(0.9441000223) | 3.10.450.540;3.10.450.280;3.10.450.100;3.10.450.10;3.10.450.230;3.10.450.50 | null |
5izs | 2016-05-25 | other | id:A,B,C,D,E,F;type:D;source:synthetic construct;length:96;seq_nat:SEELRAVADLQRLNIELARKLLEAVARLQELNIDLVRKTSELTDEKTIREEIRKVKEESKRIVEEAEEEIRRAKEESRYIADESRGSLEHHHHHH;seq_unnat:SEELRAVADLQRLNIELARKLLEAVARLQELNIDLVRKTSELTDEKTIREEIRKVKEESKRIVEEAEEEIRRAKEESRYIADESRGSLEHHHHHH | 11,311.688 | P 3 | 72.670|72.670|88.240|90.00|90.00|120.00 | X-RAY DIFFRACTION | null | S.E. Boyken;Z. Chen;B. Groves;R.A. Langan;G. Oberdorfer;A. Ford;J.M. Gilmore;C. Xu;F. DiMaio;J.H. Pereira;B. Sankaran;G. Seelig;P.H. Zwart;D. Baker | "De novo design of protein homo-oligomers with modular hydrogen-bond network-mediated specificity", Science, 352, 680-687 | 10.1126/science.aad8865|27151862|0038|1095-9203|SCIEAS | US | De novo design of protein homo-oligomers with modular hydrogen bond network-mediated specificity | de novo protein;rosetta;de novo design | 6xi6(111);7jh5(75);7cbc(73) | 9drl(111) | 6xi6(0.9527999759) | null | 6xi6(111) | 9drl(111) | 6xi6(0.9527999759) | 2e87(0.8199999928) | 1.10.287.660;6.10.140.630;1.10.287.3810;1.10.287.70;1.10.287.690;1.10.287.3290;1.10.287.120;6.10.140.1450;6.10.140.1740;1.10.287.140;1.10.287.210;1.10.287.310;1.20.20.10;6.10.260.10;1.10.287.550;1.20.5.730;1.10.287.710;6.10.140.1460;1.10.287.230;1.10.287.1890;6.10.250.1010;6.10.280.110;6.10.140.1720;4.10.860.10;1.10.28... | null |
5j0h | 2016-05-25 | other | id:A,B;type:D;source:synthetic construct;length:79;seq_nat:GSHMGTKYELRRALEELEKALRELKKSLDELERSLEELEKNPSEDALVENNRLNVENNKIIVEVLRIIAEVLKINAKSD;seq_unnat:GSHMGTKYELRRALEELEKALRELKKSLDELERSLEELEKNPSEDALVENNRLNVENNKIIVEVLRIIAEVLKINAKSD | 9,143.416 | H 3 2 | 53.194|53.194|278.642|90.00|90.00|120.00 | X-RAY DIFFRACTION | null | S.E. Boyken;Z. Chen;B. Groves;R.A. Langan;G. Oberdorfer;A. Ford;J.M. Gilmore;C. Xu;F. DiMaio;J.H. Pereira;B. Sankaran;G. Seelig;P.H. Zwart;D. Baker | "De novo design of protein homo-oligomers with modular hydrogen-bond network-mediated specificity", Science, 352, 680-687 | 10.1126/science.aad8865|27151862|0038|1095-9203|SCIEAS | US | De novo design of protein homo-oligomers with modular hydrogen bond network-mediated specificity | de novo protein;rosetta;de novo design | 6n9h(107);6naf(107);5j0i(101);9dkk(101);9cwp(100);9cwr(100);6msr(73);6msq(69);8ub3(66);8ubg(65);8uao(64);5j0j(63);8glt(56) | 9drl(62) | 6n9h(0.9588000178);6naf(0.9611999989);6msr(0.970600009) | null | 6n9h(107) | 9drl(62) | 6msr(0.970600009) | 2ic6(0.9244999886) | 1.10.287.660;1.10.287.70;1.10.287.690;1.20.20.10;1.10.287.550;1.10.287.230;6.10.280.110;1.10.287.540;1.10.287.750;1.10.287.740;1.10.287.1060;1.10.287.470;6.10.140.820;1.10.287.940;1.10.287.180;1.20.58.1710;1.20.5.1930;1.10.287.1140;1.20.58.340;1.10.287.130;6.10.280.190;6.10.140.1530;1.10.287.770;1.20.58.90 | null |
5j0i | 2016-05-25 | other | id:A;type:D;source:synthetic construct;length:79;seq_nat:GSHMGTKYELRRALEELEKALQELREMLRKLKESLEELKKNPSEDALVRNNELIVEVLRVIVEVLSIIARVLEINARSD;seq_unnat:GSHMGTKYELRRALEELEKALQELREMLRKLKESLEELKKNPSEDALVRNNELIVEVLRVIVEVLSIIARVLEINARSD | 9,183.677 | P 63 2 2 | 44.158|44.158|153.326|90.00|90.00|120.00 | X-RAY DIFFRACTION | null | S.E. Boyken;Z. Chen;B. Groves;R.A. Langan;G. Oberdorfer;A. Ford;J.M. Gilmore;C. Xu;F. DiMaio;J.H. Pereira;B. Sankaran;G. Seelig;P.H. Zwart;D. Baker | "De novo design of protein homo-oligomers with modular hydrogen-bond network-mediated specificity", Science, 352, 680-687 | 10.1126/science.aad8865|27151862|0038|1095-9203|SCIEAS | US | De novo design of protein homo-oligomers with modular hydrogen bond network-mediated specificity | de novo protein;rosetta;de novo design | 5j0h(103);9dkk(72);9cwp(70);9cwr(70);6n9h(67);6naf(67);6msr(66);6msq(62);5j0j(61);8uao(57);8ub3(57);8ubg(57) | 9drl(53) | null | null | 5j0h(103) | 9drl(53) | 5j10(0.9343000054) | 2ic6(0.8679999709) | 6.10.250.1960;1.10.287.1520;1.10.287.600;1.20.5.420;1.10.12.10;1.20.5.2620;6.10.250.660;6.10.140.380;6.10.140.480;6.10.140.1970;6.10.250.500;1.20.5.4010;1.10.287.3280;6.10.250.740;1.20.5.3960;6.10.140.360;6.10.250.2370;6.10.250.1210;6.10.140.2110;1.10.287.190;6.10.250.890;1.10.880.10;6.10.250.400;6.10.250.160;6.10.250.... | null |
5j0j | 2016-05-25 | other | id:A,B,C;type:D;source:synthetic construct;length:79;seq_nat:GSHMGTKYKIKETLKRLEDSLRELRRILEELKEMLERLEKNPDKDVIVEVLKVIVKAIEASVENQRISAENQKALAESD;seq_unnat:GSHMGTKYKIKETLKRLEDSLRELRRILEELKEMLERLEKNPDKDVIVEVLKVIVKAIEASVENQRISAENQKALAESD | 9,163.594 | P 1 21 1 | 50.010|34.386|61.542|90.00|92.40|90.00 | X-RAY DIFFRACTION | null | S.E. Boyken;Z. Chen;B. Groves;R.A. Langan;G. Oberdorfer;A. Ford;J.M. Gilmore;C. Xu;F. DiMaio;J.H. Pereira;B. Sankaran;G. Seelig;P.H. Zwart;D. Baker | "De novo design of protein homo-oligomers with modular hydrogen-bond network-mediated specificity", Science, 352, 680-687 | 10.1126/science.aad8865|27151862|0038|1095-9203|SCIEAS | US | De novo design of protein homo-oligomers with modular hydrogen bond network-mediated specificity | de novo protein;rosetta;de novo design | 8fbj(102);8fbo(100);8fbk(99);8fbi(96);8fbn(90);6xt4(70);5j0h(62);5j0i(57) | null | 8fbk(0.9578999877);8fbn(0.9516000152) | null | 8fbj(102) | null | 8fbk(0.9578999877) | 2ic6(0.9052000046) | 1.10.287.110;1.20.5.420;1.10.287.660;6.10.140.630;1.10.287.3810;6.10.140.1300;1.10.287.70;6.10.140.790;1.10.287.690;1.10.287.3290;1.10.287.120;1.10.287.140;1.10.287.210;1.10.287.310;1.20.20.10;1.20.5.730;1.10.287.550;6.10.140.1480;1.10.287.610;1.10.287.230;1.10.287.1890;6.10.250.1010;6.10.280.110;6.10.140.420;1.10.287.... | null |
5j0k | 2016-05-25 | other | id:A,B;type:D;source:synthetic construct;length:80;seq_nat:GSHMGTRTEIIRELERSLREQEELAKRLKELLRELERLQREGSSDEDVRELLREIKELVEEIEKLAREQKYLVEELKRQD;seq_unnat:GSHMGTRTEIIRELERSLREQEELAKRLKELLRELERLQREGSSDEDVRELLREIKELVEEIEKLAREQKYLVEELKRQD | 9,750.05 | P 21 21 21 | 48.720|51.270|65.610|90.00|90.00|90.00 | X-RAY DIFFRACTION | null | S.E. Boyken;Z. Chen;B. Groves;R.A. Langan;G. Oberdorfer;A. Ford;J.M. Gilmore;C. Xu;F. DiMaio;J.H. Pereira;B. Sankaran;G. Seelig;P.H. Zwart;D. Baker | "De novo design of protein homo-oligomers with modular hydrogen-bond network-mediated specificity", Science, 352, 680-687 | 10.1126/science.aad8865|27151862|0038|1095-9203|SCIEAS | US | De novo design of protein homo-oligomers with modular hydrogen bond network-mediated specificity | de novo protein;rosetta;de novo design | 6egc(131);8cwy(99);6b87(87);8cws(68);5j10(54) | null | 8cwy(0.9761999846);6egc(0.9862999916) | null | 6egc(131) | null | 6egc(0.9862999916) | 2i1k(0.8998000026) | 1.10.287.660;6.10.140.630;1.10.287.3810;1.10.287.70;1.10.287.690;1.10.287.3290;6.10.140.1450;1.10.287.210;1.10.287.310;1.20.20.10;6.10.260.10;1.10.287.550;1.20.5.730;6.10.140.1460;1.10.287.610;1.10.287.230;1.10.287.1890;6.10.250.1010;6.10.280.110;6.10.140.1720;6.10.140.420;1.10.287.540;1.10.287.750;4.10.860.10;1.10.287... | null |
5j0l | 2016-07-06 | other | id:A,B,C,D,E,F;type:D;source:synthetic construct;length:142;seq_nat:SLMEKAARAAKELSRESARAAKELADSNAKAAEDLMREIARSSSSERLLELMAEAIRELQKQAAESIADSQRLVVEAIIRLAEAVKQGASEKEIDEIVEEAKKRLEELAERSRQENKKIIDRAKYEMDEESGSLEHHHHHH;seq_unnat:SLMEKAARAAKELSRESARAAKELADSNAKAAEDLMREIARSSSSERLLELMAEAIRELQKQAAESIADSQRLVVEAIIRLAEAVKQGASEKEIDEIVEE... | 15,969.917 | P 65 | 152.650|152.650|70.190|90.00|90.00|120.00 | X-RAY DIFFRACTION | null | S.E. Boyken;Z. Chen;B. Groves;R.A. Langan;G. Oberdorfer;A. Ford;J.M. Gilmore;C. Xu;F. DiMaio;J.H. Pereira;B. Sankaran;G. Seelig;P.H. Zwart;D. Baker | "De novo design of protein homo-oligomers with modular hydrogen-bond network-mediated specificity", Science, 352, 680-687 | 10.1126/science.aad8865|27151862|0038|1095-9203|SCIEAS | US | De novo design of protein homo-oligomers with modular hydrogen bond network-mediated specificity | de novo protein;rosetta;de novo design | 5cwb(50) | null | null | null | 5cwb(50) | null | 8ga6(0.646600008) | 1avo(0.5780000091) | 1.20.5.420;1.20.1270.410;1.20.120.750;1.20.120.220;1.20.120.20;1.20.120.330;1.20.120.470;1.20.1270.50;1.20.120.560;1.20.81.20;1.10.287.1060;1.20.58.220;1.20.120.550;1.10.132.20;1.10.132.100;1.10.8.1010;1.20.120.230;1.20.1270.140;1.20.1270.180;6.10.140.120;1.20.120.610;1.20.58.310;1.20.58.90 | null |
5j10 | 2016-05-25 | other | id:A,B;type:D;source:synthetic construct;length:82;seq_nat:GSHMGTDTDELLRLAKEQAELLKEIKKLVEEIARLVKEIQEDPSDELLKTLAELVRKLKELVEDMERSMKEQLYIIKKQKS;seq_unnat:GSHMGTDTDELLRLAKEQAELLKEIKKLVEEIARLVKEIQEDPSDELLKTLAELVRKLKELVEDMERSMKEQLYIIKKQKS | 9,481.073 | P 21 21 21 | 41.740|42.120|123.670|90.00|90.00|90.00 | X-RAY DIFFRACTION | null | S.E. Boyken;Z. Chen;B. Groves;R.A. Langan;G. Oberdorfer;A. Ford;J.M. Gilmore;C. Xu;F. DiMaio;J.H. Pereira;B. Sankaran;G. Seelig;P.H. Zwart;D. Baker | "De novo design of protein homo-oligomers with modular hydrogen-bond network-mediated specificity", Science, 352, 680-687 | 10.1126/science.aad8865|27151862|0038|1095-9203|SCIEAS | US | De novo design of protein homo-oligomers with modular hydrogen bond network-mediated specificity | de novo protein;de novo design;rostta | 8szz(107) | null | 8szz(0.9726999998) | null | 8szz(107) | null | 8szz(0.9726999998) | 4l0r(0.9106000066) | 1.10.287.110;1.10.287.600;1.20.5.420;1.10.287.660;6.10.140.630;1.10.287.3810;1.10.287.70;6.10.140.790;1.10.287.690;1.10.287.3290;1.10.287.140;1.10.287.210;1.10.287.310;1.20.20.10;1.10.287.550;1.10.287.610;1.10.287.230;6.10.250.1010;6.10.280.110;6.10.140.1320;6.10.140.420;1.10.287.540;1.10.287.750;4.10.860.10;1.10.287.8... | null |
5j2l | 2016-05-25 | other | id:B,A;type:D;source:synthetic construct;length:82;seq_nat:GSHMGSEDYKLREAQRELDKQRKDTEEIRKRLKEIQRLTDERTSTADELIKELREIIRRLQEQSEKLREIIEELEKIIRKR;seq_unnat:GSHMGSEDYKLREAQRELDKQRKDTEEIRKRLKEIQRLTDERTSTADELIKELREIIRRLQEQSEKLREIIEELEKIIRKR | 9,984.396 | P 1 21 1 | 35.380|45.700|48.320|90.00|97.43|90.00 | X-RAY DIFFRACTION | null | S.E. Boyken;Z. Chen;B. Groves;R.A. Langan;G. Oberdorfer;A. Ford;J.M. Gilmore;C. Xu;F. DiMaio;J.H. Pereira;B. Sankaran;G. Seelig;P.H. Zwart;D. Baker | "De novo design of protein homo-oligomers with modular hydrogen-bond network-mediated specificity", Science, 352, 680-687 | 10.1126/science.aad8865|27151862|0038|1095-9203|SCIEAS | US | De novo design of protein homo-oligomers with modular hydrogen bond network-mediated specificity | de novo protein;rosetta;de novo design | null | null | null | null | 5j73(44) | null | 6b87(0.8799999952) | 2q0o(0.8330000043) | 1.10.287.660;6.10.140.630;1.10.287.3810;1.10.287.70;1.10.287.690;1.10.287.3290;6.10.140.1450;1.10.287.140;1.10.287.210;1.10.287.450;1.10.287.310;1.20.20.10;6.10.260.10;1.10.287.550;1.20.85.10;1.10.150.340;6.10.140.1460;1.10.287.610;1.10.287.230;1.10.287.1890;6.10.250.1010;6.10.280.110;6.10.140.1720;4.10.860.10;1.10.287... | null |
5j73 | 2016-05-25 | other | id:A,B,C,D;type:D;source:synthetic construct;length:82;seq_nat:GSHMGTSDYIIEQIQRDQEEARKKVEEAEERLERVKEASKRGVSSDQLLDLIRELAEIIEELIRIIRRSNEAIKELIKNQS;seq_unnat:GSHMGTSDYIIEQIQRDQEEARKKVEEAEERLERVKEASKRGVSSDQLLDLIRELAEIIEELIRIIRRSNEAIKELIKNQS | 9,477.684 | P 1 21 1 | 37.790|91.970|45.840|90.00|111.14|90.00 | X-RAY DIFFRACTION | null | S.E. Boyken;Z. Chen;B. Groves;R.A. Langan;G. Oberdorfer;A. Ford;J.M. Gilmore;C. Xu;F. DiMaio;J.H. Pereira;B. Sankaran;G. Seelig;P.H. Zwart;D. Baker | "De novo design of protein homo-oligomers with modular hydrogen-bond network-mediated specificity", Science, 352, 680-687 | 10.1126/science.aad8865|27151862|0038|1095-9203|SCIEAS | US | De novo design of protein homo-oligomers with modular hydrogen bond network-mediated specificity | de novo protein;rosetta;de novo design | 6y07(132) | null | null | null | 6y07(132) | null | 7upo(0.8251000047) | 4mh6(0.7900000215) | 1.10.287.660;6.10.140.630;1.10.287.3810;1.10.287.70;1.10.287.690;1.10.287.3290;6.10.140.1450;1.10.287.140;1.10.287.210;1.10.287.310;1.20.20.10;6.10.260.10;1.10.287.550;1.20.85.10;6.10.140.1140;6.10.140.1460;1.10.287.610;1.10.287.230;1.10.287.1890;6.10.250.1010;6.10.280.110;6.10.140.1720;6.10.140.420;1.10.287.540;1.10.2... | null |
5j7d | 2016-10-05 | other | id:A,B,C,D,E,F,G,H;type:D;source:synthetic construct;length:113;seq_nat:MVLDVTKDHWLLYVLLAQLPVMVLFRKDNDEEAKKVEYIVRELAQEFDGLIMVFELDTNKAPEIAKKYNITTTPTVAFFKNGEDKSVLIGAIPKDQLRDEILKYLGHHHHHH;seq_unnat:MVLDVTKDHWLLYVLLAQLPVMVLFRKDNDEEAKKVEYIVRELAQEFDGLIMVFELDTNKAPEIAKKYNITTTPTVAFFKNGEDKSVLIGAIPKDQLRDEILKYLGHHHHHH | 13,060.109 | P 21 21 21 | 58.070|67.950|229.451|90.00|90.00|90.00 | X-RAY DIFFRACTION | null | K.E. Johansson;N.T. Johansen;S. Christensen;S. Horowitz;J.C. Bardwell;J.G. Olsen;M. Willemoes;K. Lindorff-Larsen;J. Ferkinghoff-Borg;T. Hamelryck;J.R. Winther | "Computational Redesign of Thioredoxin Is Hypersensitive toward Minor Conformational Changes in the Backbone Template", J.Mol.Biol., 428, 4361-4377 | 10.1016/j.jmb.2016.09.013|27659562|0070|1089-8638|JMOBAK | UK | Computationally designed thioredoxin df106 | oxidoreductase;rosetta;computational design;de novo protein;thioredoxin | 7q3k(209);7q3j(202);8xyw(72);7vql(53) | 1gl8(95);1fb0(95);1fb6(95);2puk(95);2ynx(68);2yj7(67);4ba7(66);3ziv(65);2yn1(65);4ulx(64);2l5l(63);2yzu(61);4tn8(61);2cvk(61);3dyr(60);1dby(59);1zzy(59);2o8v(59);4xhm(59);2fch(58);1zcp(58);2h70(58);2h71(58);2h73(58);2h75(58);1sl0(57);1x9m(57);1skr(57);1sl1(57);1tk8(57);1xoa(57);1sks(57);1xob(57);1zyq(57);1sl2(57);2h6x(... | null | null | 7q3k(209) | 1gl8(95) | 7q3j(0.8219000101) | 2yj7(0.7943000197) | 6.10.250.1960;3.40.30.30;6.10.250.1560;3.40.50.12590;6.10.250.400;6.10.250.1590;3.40.50.2300;3.40.50.800;4.10.180.60;1.20.5.460;4.10.180.10;6.10.250.1110;3.40.30.170;6.10.250.2050;6.10.250.2830;3.40.30.50;1.20.5.220;1.20.5.640;6.10.250.1990;3.40.30.10 | null |
5jg9 | 2016-09-28 | other | id:A,B,C;type:D;source:synthetic construct;length:47;seq_nat:GSEERRYKRCGQDEERVRRECKERGERQNCQYQIRKEGNCYVCEIRC;seq_unnat:GSEERRYKRCGQDEERVRRECKERGERQNCQYQIRKEGNCYVCEIRC | 5,843.565 | P 1 21 1 | 34.920|45.533|49.704|90.00|105.09|90.00 | X-RAY DIFFRACTION | null | G. Bhardwaj;V.K. Mulligan;C.D. Bahl;J.M. Gilmore;P.J. Harvey;O. Cheneval;G.W. Buchko;S.V. Pulavarti;Q. Kaas;A. Eletsky;P.S. Huang;W.A. Johnsen;P.J. Greisen;G.J. Rocklin;Y. Song;T.W. Linsky;A. Watkins;S.A. Rettie;X. Xu;L.P. Carter;R. Bonneau;J.M. Olson;E. Coutsias;C.E. Correnti;T. Szyperski;D.J. Craik;D. Baker | "Accurate de novo design of hyperstable constrained peptides", Nature, 538, 329-335 | 10.1038/nature19791|27626386|0006|1476-4687|NATUAS | UK | Crystal structure of the de novo mini protein gehee_06 | de novo protein;disulfide-rich;de novo design of hyper stable | null | null | null | null | 5jg9(0) | null | 2gjh(0.6488000154) | 1r7m(0.7802000046) | 3.30.30.10;3.30.1070.20;3.30.1070.10;3.30.30.50;3.30.70.3360;3.30.70.1550;3.30.30.180;3.30.70.2140;3.30.70.330;3.30.1490.230;3.30.70.1530;3.30.1490.140 | null |
5jhi | 2016-09-28 | other | id:A;type:D;source:synthetic construct;length:35;seq_nat:CKQRRRYRGSEEECRKYAEELSRRTGCEVEVECET;seq_unnat:CKQRRRYRGSEEECRKYAEELSRRTGCEVEVECET | 4,278.767 | null | ||||| | SOLUTION NMR | null | G. Bhardwaj;V.K. Mulligan;C.D. Bahl;J.M. Gilmore;P.J. Harvey;O. Cheneval;G.W. Buchko;S.V. Pulavarti;Q. Kaas;A. Eletsky;P.S. Huang;W.A. Johnsen;P.J. Greisen;G.J. Rocklin;Y. Song;T.W. Linsky;A. Watkins;S.A. Rettie;X. Xu;L.P. Carter;R. Bonneau;J.M. Olson;E. Coutsias;C.E. Correnti;T. Szyperski;D.J. Craik;D. Baker | "Accurate de novo design of hyperstable constrained peptides", Nature, 538, 329-335 | 10.1038/nature19791|27626386|0006|1476-4687|NATUAS | UK | Solution structure of the de novo mini protein gehe_06 | de novo protein | null | null | null | null | 5jhi(0) | null | 9xzo(0.6213999987) | 3bvp(0.7095999718) | null | null |
5ji4 | 2016-09-28 | other | id:A;type:D;source:synthetic construct;length:37;seq_nat:APCECDVNGETYTVSSSEECERLCRKLGVTNCRVHCG;seq_unnat:APCECDVNGETYTVSSSEECERLCRKLGVTNCRVHCG | 4,054.548 | null | ||||| | SOLUTION NMR | null | G. Bhardwaj;V.K. Mulligan;C.D. Bahl;J.M. Gilmore;P.J. Harvey;O. Cheneval;G.W. Buchko;S.V. Pulavarti;Q. Kaas;A. Eletsky;P.S. Huang;W.A. Johnsen;P.J. Greisen;G.J. Rocklin;Y. Song;T.W. Linsky;A. Watkins;S.A. Rettie;X. Xu;L.P. Carter;R. Bonneau;J.M. Olson;E. Coutsias;C.E. Correnti;T. Szyperski;D.J. Craik;D. Baker | "Accurate de novo design of hyperstable constrained peptides", Nature, 538, 329-335 | 10.1038/nature19791|27626386|0006|1476-4687|NATUAS | UK | Solution structure of the de novo mini protein geehe_02 | peptide design;de novo protein;drug design;disulfide-rich | null | null | null | null | 5ji4(0) | null | 8fjf(0.516900003) | 5eix(0.673600018) | 2.20.28.50;3.10.20.510;3.30.160.60 | null |
5jqz | 2016-06-29 | other | id:A,B;type:D;source:synthetic construct;length:80;seq_nat:GSHMGTAIEANSRMLKALIEIAKAIWKALWANSLLLEATSRGDTERMRQWAEEARKIYKEAEKIIDRADEIVEEAKKRHD;seq_unnat:GSHMGTAIEANSRMLKALIEIAKAIWKALWANSLLLEATSRGDTERMRQWAEEARKIYKEAEKIIDRADEIVEEAKKRHD | 9,210.558 | P 21 21 2 | 70.690|37.331|58.716|90.00|90.00|90.00 | X-RAY DIFFRACTION | null | S.E. Boyken;Z. Chen;B. Groves;R.A. Langan;G. Oberdorfer;A. Ford;J.M. Gilmore;C. Xu;F. DiMaio;J.H. Pereira;B. Sankaran;G. Seelig;P.H. Zwart;D. Baker | "De novo design of protein homo-oligomers with modular hydrogen-bond network-mediated specificity", Science, 352, 680-687 | 10.1126/science.aad8865|27151862|0038|1095-9203|SCIEAS | US | Designed two-ring homotetramer at 3.8a resolution | protein design;de novo protein;hydrogen bond networks | null | null | null | null | 5jqz(0) | null | 8tn1(0.7969999909) | 3qne(0.8140000105) | 1.10.287.110;1.20.5.420;1.10.287.660;6.10.140.630;1.10.287.3810;6.10.140.1300;1.10.287.70;1.10.287.690;1.10.287.3290;1.10.287.120;6.10.140.1450;1.10.287.140;1.10.287.210;1.10.287.450;1.10.287.310;1.20.20.10;6.10.260.10;1.10.287.550;1.20.85.10;6.10.140.1480;6.10.140.1460;1.10.287.230;1.10.287.1890;6.10.250.1010;6.10.280... | null |
5k7v | 2017-04-12 | other | id:A,B,C;type:D;source:synthetic construct;length:291;seq_nat:MIEEVVAEMIDILAESSKKSIEELARAADNKTTEKAVAEAIEEIARLATAAIQLIEALAKNLASEEFMARAISAIAELAKKAIEAIYRLADNHTTDTFMARAIAAIANLAVTAILAIAALASNHTTEEFMARAISAIAELAKKAIEAIYRLADNHTTDKFMAAAIEAIALLATLAILAIALLASNHTTEEFMAKAISAIAELAKKAIEAIYRLADNHTSPTYIEKAIEAIEKIARKAIKAIEMLAKNITTEEYKEKAK... | 31,442.357 | P 3 2 1 | 159.005|159.005|94.982|90.00|90.00|120.00 | X-RAY DIFFRACTION | null | J.A. Fallas;G. Ueda;W. Sheffler;V. Nguyen;D.E. McNamara;B. Sankaran;J.H. Pereira;F. Parmeggiani;T.J. Brunette;D. Cascio;T.R. Yeates;P. Zwart;D. Baker | "Computational design of self-assembling cyclic protein homo-oligomers", Nat Chem, 9, 353-360 | 10.1038/nchem.2673|28338692||1755-4349| | UK | Computational design of self-assembling cyclic protein homooligomers | de novo protein;rosetta;de novo design | 6vfk(472);6vfh(472) | null | null | null | 6vfk(472) | null | 6vfh(0.9108999968) | 3lf9(0.5303999782) | 1.20.58.740;1.20.58.60;1.25.40.90;1.20.1440.70;1.20.1050.10;1.25.40.240;1.20.120.30;1.20.58.150;1.20.1310.30;1.20.1440.210;1.20.58.1440;1.25.10.30;1.20.58.830;1.20.58.70;1.20.1440.60;1.20.58.80;1.25.40.450;1.20.140.70;1.10.357.100;1.20.58.600;1.20.58.220;1.10.357.50;1.20.190.10;1.20.58.1460;1.20.58.1080;1.20.1310.10;1.... | null |
5k92 | 2016-08-31 | other | id:A,B,C;type:U;source:unknown;length:31;seq_nat:XEWEALEKKLAALESKCQALEKKLEALEHGX;seq_unnat:(ACE)EWEALEKKLAALESKCQALEKKLEALEHG(NH2) | 3,325.85 | C 1 2 1 | 77.574|29.409|44.353|90.00|118.78|90.00 | X-RAY DIFFRACTION | null | L. Ruckthong;M.L. Zastrow;J.A. Stuckey;V.L. Pecoraro | "A Crystallographic Examination of Predisposition versus Preorganization in de Novo Designed Metalloproteins", J.Am.Chem.Soc., 138, 11979-11988 | 10.1021/jacs.6b07165|27532255||1520-5126|JACSAT | US | Crystal structure of an apo tris-thiolate binding site in a de novo three stranded coiled coil peptide | de novo protein;three stranded coiled coil tris-thiolate environment;de novo designed peptide | 5u9t(57);5u9u(57);2x6p(51);2jgo(51);5kb0(51);7n2y(51);5kb1(51);6egl(51);7n2z(51);6egm(51);6egn(51) | null | 5u9t(1);5u9u(0.9983999729);3h5f(1);3h5g(1);2jgo(1);3ljm(1);1cos(0.9930999875);2x6p(0.991599977);3pbj(0.9853000045);6egn(0.9559999704);5uxt(0.9919999838);6ego(0.9559999704);6osd(0.9926000237);6v57(0.9911000133);6q1w(0.9941999912);6v5g(0.9943000078);6v5i(0.9941999912);6v5j(0.9941999912);6os8(0.9929000139);6ovu(0.99019998... | null | 5u9t(57) | null | 5u9t(1) | null | 6.10.250.770;1.20.5.420;1.20.5.430;1.20.5.2620;1.20.5.1450;1.20.5.700;6.10.250.500;6.10.250.200;6.10.250.2150;6.10.250.880;6.10.250.270;1.20.5.3960;6.10.250.2060;6.10.250.1090;6.10.250.2370;6.10.250.2720;6.10.250.1210;1.20.5.470;6.10.250.1020;6.10.250.1440;6.10.250.10;1.20.5.1610;6.10.250.160;6.10.250.850;6.10.250.490;... | null |
5kb0 | 2016-08-31 | other | id:A;type:U;source:unknown;length:36;seq_nat:EWEALEKKLAALESKCQALEKKLQALEKKHEALEHG;seq_unnat:EWEALEKKLAALESKCQALEKKLQALEKKHEALEHG | 4,139.789 | H 3 2 | 38.117|38.117|144.455|90.000|90.000|120.000 | X-RAY DIFFRACTION | null | L. Ruckthong;M.L. Zastrow;J.A. Stuckey;V.L. Pecoraro | "A Crystallographic Examination of Predisposition versus Preorganization in de Novo Designed Metalloproteins", J.Am.Chem.Soc., 138, 11979-11988 | 10.1021/jacs.6b07165|27532255||1520-5126|JACSAT | US | Crystal structure of a tris-thiolate pb(ii) complex in a de novo three-stranded coiled coil peptide | de novo protein;three-stranded coiled coil tris-thiolate pb(ii) complex in de novo peptide;de novo designed peptide | 5kb1(70);6egl(66);6egm(66);6egn(66);7n2y(64);5kb2(64);6egp(64);7n2z(64);6ego(64);6mcd(60);5u9t(51);5u9u(51);5k92(51) | null | 5kb1(0.972299993);7n2z(0.9918000102);6egl(0.9925000072);6egn(0.9987999797);5kb2(0.9943000078);6egm(0.9930999875);6egp(0.992200017);7n2y(0.986199975);6ego(0.986800015);6mcd(0.9918000102) | null | 5kb1(70) | null | 6egn(0.9987999797) | null | 1.20.5.590;1.20.5.420;1.20.5.1450 | null |
5kb1 | 2016-08-31 | other | id:A;type:U;source:unknown;length:36;seq_nat:EWEALEKKLAALESKCQALEKKLQALEKKHEALEHG;seq_unnat:EWEALEKKLAALESKCQALEKKLQALEKKHEALEHG | 4,139.789 | H 3 2 | 38.048|38.048|143.651|90.000|90.000|120.000 | X-RAY DIFFRACTION | null | L. Ruckthong;M.L. Zastrow;J.A. Stuckey;V.L. Pecoraro | "A Crystallographic Examination of Predisposition versus Preorganization in de Novo Designed Metalloproteins", J.Am.Chem.Soc., 138, 11979-11988 | 10.1021/jacs.6b07165|27532255||1520-5126|JACSAT | US | Crystal structure of a tris-thiolate hg(ii) complex in a de novo three stranded coiled coil peptide | de novo protein;three stranded coiled coil tris-thiolate hg(ii) complex in helical coiled coil;de novo designed peptide | 5kb0(70);6egl(66);6egm(66);6egn(66);7n2y(64);5kb2(64);6egp(64);7n2z(64);6ego(64);6mcd(60);5u9t(51);5u9u(51);5k92(51) | null | 5kb0(0.9726999998);7n2z(0.9724000096);6egl(0.9738000035);6egn(0.9826999903);5kb2(0.9749000072);6egm(0.9695000052);6egp(0.9708999991);7n2y(0.9804000258);6ego(0.9684000015);6mcd(0.9743999839) | null | 5kb0(70) | null | 6egn(0.9826999903) | null | 1.20.5.590;1.20.5.170;1.20.5.460;1.20.5.1450 | null |
5kb2 | 2016-08-31 | other | id:A;type:U;source:unknown;length:36;seq_nat:EWEALEKKLAAAESKCQALEKKLQALEKKLEALEHG;seq_unnat:EWEALEKKLAAAESKCQALEKKLQALEKKLEALEHG | 4,072.72 | H 3 2 | 37.853|37.853|141.072|90.000|90.000|120.000 | X-RAY DIFFRACTION | null | L. Ruckthong;M.L. Zastrow;J.A. Stuckey;V.L. Pecoraro | "A Crystallographic Examination of Predisposition versus Preorganization in de Novo Designed Metalloproteins", J.Am.Chem.Soc., 138, 11979-11988 | 10.1021/jacs.6b07165|27532255||1520-5126|JACSAT | US | Crystal structure of a tris-thiolate zn(ii)s3o complex in a de novo three-stranded coiled coil peptide | de novo protein;three-stranded coiled coil tris-thiolate zn(ii)s3o in de novo helical coiled coil structure;de novo designed peptide | 6egp(69);6ego(69);6egl(67);6egm(67);6egn(67);7n2y(65);7n2z(65);5kb0(64);5kb1(64);6mcd(63) | null | 6egp(1);6ego(0.9962999821);6egl(1);6egm(1);6egn(0.9980999827);7n2z(0.997600019);7n2y(1);5kb0(0.9943000078);6mcd(1);5kb1(0.9757000208) | null | 6egp(69) | null | 6egp(1) | null | 6.10.250.770;1.20.5.420;1.20.5.930;6.10.250.2070;1.20.5.430;6.10.250.810;1.20.5.1450;1.20.5.750;1.20.5.700;6.10.250.2720;1.10.287.210;6.10.250.2060;6.10.250.110;6.10.250.1090;1.20.5.520;6.10.250.1020;6.10.250.1440;6.10.250.10;1.20.5.1610;6.10.250.2110;6.10.250.850;6.10.250.380;6.10.250.2230;1.20.5.110;1.20.5.250;1.20.5... | null |
5kba | 2017-04-12 | other | id:A,B,C,D;type:D;source:synthetic construct;length:171;seq_nat:MHHHHHHGSWGSSELGKRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHAEVVALLIEKGADVNAKDSDGRTPLHHAAENGHDEVVLILLLKGADVNAKDSDGRTPLHHAAENGHKRVVLVLILAGADVNTSDSDGRTPLDLAREHGNEEVVKALEKQ;seq_unnat:MHHHHHHGSWGSSELGKRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHAEVVALLIEKGADVNA... | 18,129.912 | C 1 2 1 | 93.372|48.817|139.267|90.00|98.87|90.00 | X-RAY DIFFRACTION | null | J.A. Fallas;G. Ueda;W. Sheffler;V. Nguyen;D.E. McNamara;B. Sankaran;J.H. Pereira;F. Parmeggiani;T.J. Brunette;D. Cascio;T.R. Yeates;P. Zwart;D. Baker | "Computational design of self-assembling cyclic protein homo-oligomers", Nat Chem, 9, 353-360 | 10.1038/nchem.2673|28338692||1755-4349| | UK | Computational design of self-assembling cyclic protein homooligomers | de novo protein;rosetta;de novo design | 4gpm(293);4hqd(275);4hb5(274);4gmr(262);5hry(258);5hs0(255);5eil(232);2xee(192);4j7w(189);2xeh(188);4j8y(186);6fp9(186);4qfv(186);9epa(184);9fe1(184);5kng(183);5knh(183);5le9(183);5op3(182);8u1b(182);9dmi(182);2bkg(181);4ydw(181);5lea(181);7z71(180);9fe2(180);9fe3(180);6fpa(179);6fpb(179);5oou(178);5oos(178);7z7e(176);... | 4k5a(194);4hll(190);3zu7(189);2p2c(186);4hrl(186);4hrm(186);3noc(185);4jb8(183);5fin(183);5fio(183);4ydy(181);3nog(181);5enr(180);5nc5(180);4dx6(180);4u96(180);5ens(180);4dx7(180);4u8v(180);5en5(180);5jmn(180);9fhc(180);5ent(180);4u8y(180);5eno(180);2j8s(180);5enp(180);9fhg(180);9fhj(180);5enq(180);9hao(180);4c48(180);... | 4gpm(0.9866999984);5hs0(0.9786000252);5hry(0.9593999982);7z7e(0.9528999925);6fpb(0.9556000233);6fp9(0.9509999752);7z71(0.9539999962);7b4w(0.956799984);5le7(0.9563999772);7z7c(0.956799984);5eil(0.951300025);2xee(0.9509000182);5kng(0.9502999783) | 4k5a(0.9545999765);4k5b(0.9527999759) | 4gpm(293) | 4k5a(194) | 4gpm(0.9866999984) | 4k5a(0.9545999765) | 1.10.10.2400;1.25.40.70;1.10.220.10;1.20.970.10;1.10.220.100;1.25.40.1040;1.25.40.20 | null |
5kkg | 2017-07-26 | other | id:A,B;type:D;source:synthetic construct;length:477;seq_nat:MGSSHHHHHHSSGENLYFQGHMEDIKKISIFLAYNVNVDAIKYLKEEDIQKLIEEFGEEEIIEKIEEYPRKIKEPLDFVARLIHAIKTGKPAAVPLDNEELNKWFDSLFKYDEERMGGQVGIIANLLAILDLKKVIAYSPLLSKKQAEMFNNDLLYPIVENGKLVLKKPIEAYKDNDPIKINRIFEFKEGIKFKLGDEKIIAPQANRFIVASRPENLARIEIKEDLKKYLPEIGEMVDCAILSGYQGIKEKYSDGKTAEY... | 54,255.164 | P 41 21 2 | 132.529|132.529|117.438|90.000|90.000|90.000 | X-RAY DIFFRACTION | null | V. Castro-Fernandez;A. Herrera-Morande;R. Zamora;F. Merino;F. Gonzalez-Ordenes;F. Padilla-Salinas;H.M. Pereira;J. Brandao-Neto;R.C. Garratt;V. Guixe | "Reconstructed ancestral enzymes reveal that negative selection drove the evolution of substrate specificity in ADP-dependent kinases", J. Biol. Chem., 292, 21218-21218 | 10.1074/jbc.AAC117.001147|29273585|0071|1083-351X|JBCHA3 | US | Crystal structure of e72a mutant of ancestral protein ancmt of adp-dependent sugar kinases family | phosphofructokinase;bifuncional enzymes;adp-dependent sugar kinases family;glucokinase;de novo protein;enzyme evolution;ancestral protein reconstruction | 7r8z(56);7r8y(53);8bl6(51) | 5k27(923);1u2x(575);3drw(573);4b8r(254);4b8s(254);1gc5(252);1l2l(246);1ua4(219);3pkv(61);3pkw(61);3pkx(61);1pbt(60);8ula(60);1tf1(58);9i2m(56);2y4r(55);4ax2(54);2egg(54);3dr4(54);3dr7(54);2grg(53);2omo(53);9ei6(53);9ei7(53);2gfq(53);3zwl(53);3zpc(53);3zpg(53);4ija(53);5ghr(52);5ghs(52);2ki8(52);4c8g(52);4c8i(52);4c8e(5... | null | 5k27(0.9875000119) | 7r8z(56) | 5k27(923) | 7r8y(0.4347000122) | 5k27(0.9875000119) | 3.40.50.80;3.40.50.720;3.30.1110.20 | null |
5kng | 2016-12-14 | other | id:A,B,C,D;type:D;source:synthetic construct;length:171;seq_nat:MRGSHHHHHHGSDLDKKLLEAARAGQDDEVRILMANGADVNARDSYGSTPLHLAAREGHLEIVEVLLKYGADVNAADFIGDTPLHLAAYRGHLEIVEVLLKYGADVNASDITGETPLHLAAQIGHLEIVEVLLKHGADVNAQDKFGKTPADIAADNGHEDIAEVLQKLN;seq_unnat:MRGSHHHHHHGSDLDKKLLEAARAGQDDEVRILMANGADVNARDSYGSTPLHLAAREGHLEIVEVLLKYGADVNAA... | 18,244.361 | H 3 | 96.080|96.080|206.430|90.00|90.00|120.00 | X-RAY DIFFRACTION | null | A. Teplyakov;T.J. Malia;G. Obmolova;S.A. Jacobs;K.T. O'Neil;G.L. Gilliland | "Conformational flexibility of an anti-IL-13 DARPin", Protein Eng. Des. Sel., 30, 31-37 | 10.1093/protein/gzw059|27881684||1741-0134| | UK | Crystal structure of anti-il-13 darpin 6g9 | de novo protein;alternative scaffold | 5knh(345);4ydw(293);2bkg(287);5oou(285);5op3(284);8ql6(282);8ql5(282);8ql9(282);9u6a(282);8ql2(282);8ql3(282);9f8g(282);8qlb(282);8qla(282);8ql7(282);8ql8(282);8qea(282);8ql4(282);4dui(282);6fp9(281);7dng(279);7dnf(279);5oos(278);4j7w(276);4j8y(276);9fe2(271);9fe3(271);5lw2(267);5le9(267);9gtk(266);8u1b(266);9dmi(266);... | 4ydy(293);4k5a(284);2bkk(282);4lnu(282);4drx(282);4f6r(282);4hna(282);4k5b(282);4hrl(282);4hrm(281);3zu7(279);3nog(279);5eib(278);2p2c(278);3noc(278);9kcq(276);1svx(276);9kbu(276);5eyl(276);4lsz(276);5fin(276);5fio(276);2y1l(273);5eyp(272);5aao(271);5enr(271);4dx6(271);4u96(271);5ens(271);4dx7(271);4u8v(271);5en5(271);... | 5knh(0.9685999751);6fpb(0.9646000266);6fp9(0.9635000229);6fpa(0.9674999714);9gtk(0.9684000015);7z7e(0.9689999819);4ydw(0.9708999991);7z72(0.9548000097);1mj0(0.9653999805);2xee(0.9559000134);4j8y(0.9754999876);7b4w(0.959100008);7z7c(0.9639000297);4dui(0.9625999928);5lea(0.9682000279);7b4t(0.9538000226);7z71(0.9639000297... | 4ydy(0.9653000236);5fin(0.9631000161);4k5a(0.9664000273);4k5b(0.9593999982);4k5c(0.9524000287);4hna(0.9606000185);4zfh(0.9508000016) | 5knh(345) | 4ydy(293) | 4j8y(0.9754999876) | 4k5a(0.9664000273) | 1.10.10.10;1.10.10.2400;1.25.40.70;1.10.220.10;1.25.10.10;1.25.40.20 | null |
5knh | 2016-12-14 | other | id:D;type:D;source:synthetic construct;length:171;seq_nat:MRGSHHHHHHGSDLDKKLLEAARAGQDDEVRILMANGADVNARDSYGSTPLHLAAREGHLEIVEVLLKYGADVNAADFIGDTPLHLAAYRGHLEIVEVLLKYGADVNASDITGETPLHLAAQIGHLEIVEVLLKHGADVNAQDKFGKTPADIAADNGHEDIAEVLQKLN;seq_unnat:MRGSHHHHHHGSDLDKKLLEAARAGQDDEVRILMANGADVNARDSYGSTPLHLAAREGHLEIVEVLLKYGADVNAADFIGDT... | 18,244.361 | C 2 2 21 | 52.410|78.490|119.440|90.00|90.00|90.00 | X-RAY DIFFRACTION | null | A. Teplyakov;T.J. Malia;G. Obmolova;S.A. Jacobs;K.T. O'Neil;G.L. Gilliland | "Conformational flexibility of an anti-IL-13 DARPin", Protein Eng. Des. Sel., 30, 31-37 | 10.1093/protein/gzw059|27881684||1741-0134| | UK | Crystal structure of darpin 6g9 in complex with cyno il-13 | alternative scaffold;cytokine-de novo protein complex;cytokine/de novo protein | 5kng(345);4ydw(293);2bkg(287);5oou(285);5op3(284);8ql6(282);8ql5(282);8ql9(282);9u6a(282);8ql2(282);8ql3(282);9f8g(282);8qlb(282);8qla(282);8ql7(282);8ql8(282);8qea(282);8ql4(282);4dui(282);6fp9(281);7dng(279);7dnf(279);5oos(278);4j7w(276);4j8y(276);9fe2(271);9fe3(271);5lw2(267);5le9(267);9gtk(266);8u1b(266);9dmi(266);... | 4ydy(293);4k5a(284);2bkk(282);4lnu(282);4drx(282);4f6r(282);4hna(282);4k5b(282);4hrl(282);4hrm(281);3zu7(279);3nog(279);5eib(278);2p2c(278);3noc(278);9kcq(276);1svx(276);9kbu(276);5eyl(276);4lsz(276);5fin(276);5fio(276);2y1l(273);5eyp(272);5aao(271);5enr(271);4dx6(271);4u96(271);5ens(271);4dx7(271);4u8v(271);5en5(271);... | 5kng(0.9697999954);7z7e(0.9794999957);4ydw(0.9711999893);7b4w(0.9725000262);9gtk(0.975399971);6fpb(0.9714000225);2xee(0.9771000147);6fpa(0.9638000131);7b4t(0.9653000236);2xeh(0.9661999941);1mj0(0.9714999795);7z72(0.959800005);6fp9(0.9641000032);7zyu(0.9574000239);7z71(0.9595000148);9epa(0.9794999957);7z7c(0.9686999917)... | 4ydy(0.9829000235);5fin(0.9804999828);4k5a(0.9725000262);4k5b(0.9707000256);5aq9(0.9684000015);4k5c(0.9571999907);4hrl(0.9642999768);4hna(0.9574000239);4jb8(0.9663000107);5aq8(0.9545999765);4zfh(0.950699985);5aq7(0.9510999918) | 5kng(345) | 4ydy(293) | 7z7e(0.9794999957) | 4ydy(0.9829000235) | 1.10.10.10;1.10.10.2400;1.25.40.70;1.10.220.10;1.25.10.10;1.25.40.20 | null |
5kpe | 2016-09-21 | other | id:A;type:D;source:synthetic construct;length:121;seq_nat:MQDIVEAAKQAAIAIFQLWKNPTDPEAQELLNKILSPDVLDQVREHARELQKQGIHFEVKRVEVTTDGNTVNVTVELEETTGGTTTNTTYELRFEVDGDTIRRVTVTQNGGSLEHHHHHH;seq_unnat:MQDIVEAAKQAAIAIFQLWKNPTDPEAQELLNKILSPDVLDQVREHARELQKQGIHFEVKRVEVTTDGNTVNVTVELEETTGGTTTNTTYELRFEVDGDTIRRVTVTQNGGSLEHHHHHH | 13,593.999 | null | ||||| | SOLUTION NMR | null | E. Marcos;B. Basanta;T.M. Chidyausiku;Y. Tang;G. Oberdorfer;G. Liu;G.V. Swapna;R. Guan;D.A. Silva;J. Dou;J.H. Pereira;R. Xiao;B. Sankaran;P.H. Zwart;G.T. Montelione;D. Baker | "Principles for designing proteins with cavities formed by curved beta sheets", Science, 355, 201-206 | 10.1126/science.aah7389|28082595|0038|1095-9203|SCIEAS | US | Solution nmr structure of denovo beta sheet design protein, northeast structural genomics consortium (nesg) target or664 | northeast structural genomics consortium;structural genomics;psi-biology;de novo protein;nesg | null | null | null | null | 5kpe(0) | null | 8vez(0.5809999704) | 3fgy(0.5504000187) | 3.10.450.540;3.10.450.280;3.10.450.100;3.10.450.10;3.10.450.230;3.10.450.50 | null |
5kph | 2016-09-28 | other | id:A;type:D;source:synthetic construct;length:86;seq_nat:MPSEEEEKRQVKQVAKEKLLEQSPNSKVQVRRVQKQGNTIRVELELRTNGKKENYTVEVERQGNTWTVKRITRTVGSLEHHHHHH;seq_unnat:MPSEEEEKRQVKQVAKEKLLEQSPNSKVQVRRVQKQGNTIRVELELRTNGKKENYTVEVERQGNTWTVKRITRTVGSLEHHHHHH | 10,097.393 | null | ||||| | SOLUTION NMR | null | E. Marcos;B. Basanta;T.M. Chidyausiku;Y. Tang;G. Oberdorfer;G. Liu;G.V. Swapna;R. Guan;D.A. Silva;J. Dou;J.H. Pereira;R. Xiao;B. Sankaran;P.H. Zwart;G.T. Montelione;D. Baker | "Principles for designing proteins with cavities formed by curved beta sheets", Science, 355, 201-206 | 10.1126/science.aah7389|28082595|0038|1095-9203|SCIEAS | US | Solution nmr structure of denovo beta sheet design protein, northeast structural genomics consortium (nesg) target or485 | northeast structural genomics consortium;structural genomics;psi-biology;de novo protein;nesg | 4r80(133) | null | null | null | 4r80(133) | null | 4r80(0.7921000123) | 4k90(0.6014999747) | 3.10.450.130;3.30.360.60;3.30.360.10;3.30.360.40;3.10.450.520;3.30.160.40;3.10.450.40;3.30.360.90;3.10.450.560;3.10.450.10;3.30.200.150;3.10.450.360;3.30.200.70;3.10.450.380;3.30.200.20;3.30.300.30 | null |
5kvn | 2016-09-21 | other | id:A;type:U;source:unknown;length:27;seq_nat:NDKCKELKKRYPNCEVRCDPPRYEVHC;seq_unnat:NDKCKELKKRYPNCEVRCD(DPR)PRYEVHC | 3,331.867 | null | ||||| | SOLUTION NMR | null | G. Bhardwaj;V.K. Mulligan;C.D. Bahl;J.M. Gilmore;P.J. Harvey;O. Cheneval;G.W. Buchko;S.V. Pulavarti;Q. Kaas;A. Eletsky;P.S. Huang;W.A. Johnsen;P.J. Greisen;G.J. Rocklin;Y. Song;T.W. Linsky;A. Watkins;S.A. Rettie;X. Xu;L.P. Carter;R. Bonneau;J.M. Olson;E. Coutsias;C.E. Correnti;T. Szyperski;D.J. Craik;D. Baker | "Accurate de novo design of hyperstable constrained peptides", Nature, 538, 329-335 | 10.1038/nature19791|27626386|0006|1476-4687|NATUAS | UK | Nmr solution structure of designed peptide nc_hee_d1 | de novo protein;designed peptide | 6e5h(64);6e5j(64);6e5i(58);6e5k(57) | null | null | null | 6e5h(64) | null | 6e5h(0.9059000015) | 2oc6(0.6330000162) | null | null |
5kwd | 2017-04-12 | other | id:A,B,C,D;type:N;source:Metallosphaera yellowstonensis MK1;length:161;seq_nat:STEGKMLIIAAREGMIIVVIVLLEKGADPNASDKDGRTPLHYAAENGHLIIVLLLLEKGADPNAKDSDGRTPLHYAAENGHKEIVEALLEHGADPNAKDSDGRTPLHYAAENGHKEIVKLLLSKGADPNTSDSDGRTPLDLAREHGNEEIVKLLEHHHHH;seq_unnat:STEGKMLIIAAREGMIIVVIVLLEKGADPNASDKDGRTPLHYAAENGHLIIVLLLLEKGADPNAKDSDGR... | 17,364.436 | P 21 21 21 | 77.770|89.470|99.080|90.00|90.00|90.00 | X-RAY DIFFRACTION | null | J.A. Fallas;G. Ueda;W. Sheffler;V. Nguyen;D.E. McNamara;B. Sankaran;J.H. Pereira;F. Parmeggiani;T.J. Brunette;D. Cascio;T.R. Yeates;P. Zwart;D. Baker | "Computational design of self-assembling cyclic protein homo-oligomers", Nat Chem, 9, 353-360 | 10.1038/nchem.2673|28338692||1755-4349| | UK | Computationally designed symmetric homotetramer | ankyrin;homooligomer;repeat protein;designed protein;de novo protein | null | null | null | null | null | null | null | null | null | null |
5kwo | 2016-09-21 | other | id:A;type:U;source:unknown;length:26;seq_nat:CQTWRRVSPEECRKYKEEYNCVRCTE;seq_unnat:CQTWR(DAR)VSPEECRKYKEEY(DSG)CVRCTE | 3,302.74 | null | ||||| | SOLUTION NMR | null | G. Bhardwaj;V.K. Mulligan;C.D. Bahl;J.M. Gilmore;P.J. Harvey;O. Cheneval;G.W. Buchko;S.V. Pulavarti;Q. Kaas;A. Eletsky;P.S. Huang;W.A. Johnsen;P.J. Greisen;G.J. Rocklin;Y. Song;T.W. Linsky;A. Watkins;S.A. Rettie;X. Xu;L.P. Carter;R. Bonneau;J.M. Olson;E. Coutsias;C.E. Correnti;T. Szyperski;D.J. Craik;D. Baker | "Accurate de novo design of hyperstable constrained peptides", Nature, 538, 329-335 | 10.1038/nature19791|27626386|0006|1476-4687|NATUAS | UK | Nmr solution structure of designed peptide nc_ehe_d1 | de novo protein;designed peptide | null | null | null | null | 5kwo(0) | null | 5jhi(0.6649000049) | 3i9f(0.6916000247) | null | null |
5kwp | 2016-09-21 | other | id:A;type:U;source:unknown;length:27;seq_nat:TCVECAPVKVCRPDPEEARREAEERCX;seq_unnat:TCVEC(DAL)(DPR)VKVCRPDPEEARREAEERC(NH2) | 2,979.393 | null | ||||| | SOLUTION NMR | null | G. Bhardwaj;V.K. Mulligan;C.D. Bahl;J.M. Gilmore;P.J. Harvey;O. Cheneval;G.W. Buchko;S.V. Pulavarti;Q. Kaas;A. Eletsky;P.S. Huang;W.A. Johnsen;P.J. Greisen;G.J. Rocklin;Y. Song;T.W. Linsky;A. Watkins;S.A. Rettie;X. Xu;L.P. Carter;R. Bonneau;J.M. Olson;E. Coutsias;C.E. Correnti;T. Szyperski;D.J. Craik;D. Baker | "Accurate de novo design of hyperstable constrained peptides", Nature, 538, 329-335 | 10.1038/nature19791|27626386|0006|1476-4687|NATUAS | UK | Nmr solution structure of designed peptide nc_eeh_d2 | de novo protein;synthetic designed peptide | null | null | null | null | 5kwp(0) | null | 2nd3(0.6017000079) | null | null | null |
5kwx | 2016-09-21 | other | id:A;type:U;source:unknown;length:25;seq_nat:CSYTCPPQTYTFPTCEEAKKMKKRC;seq_unnat:CSYTC(DPR)PQTYTFPTCEEAKKMKKRC | 2,949.488 | null | ||||| | SOLUTION NMR | null | G. Bhardwaj;V.K. Mulligan;C.D. Bahl;J.M. Gilmore;P.J. Harvey;O. Cheneval;G.W. Buchko;S.V. Pulavarti;Q. Kaas;A. Eletsky;P.S. Huang;W.A. Johnsen;P.J. Greisen;G.J. Rocklin;Y. Song;T.W. Linsky;A. Watkins;S.A. Rettie;X. Xu;L.P. Carter;R. Bonneau;J.M. Olson;E. Coutsias;C.E. Correnti;T. Szyperski;D.J. Craik;D. Baker | "Accurate de novo design of hyperstable constrained peptides", Nature, 538, 329-335 | 10.1038/nature19791|27626386|0006|1476-4687|NATUAS | UK | Nmr solution structure of designed peptide nc_eeh_d1 | de novo protein;designed peptide | null | null | null | null | 5kwx(0) | null | 5kwp(0.5835000277) | null | null | null |
5kwz | 2016-09-21 | other | id:A;type:U;source:unknown;length:26;seq_nat:HDPEKRKECEKKYTDPKKREECKRKA;seq_unnat:HDPEKRKECEKKYTDPKKREECKRKA | 3,272.797 | null | ||||| | SOLUTION NMR | null | G. Bhardwaj;V.K. Mulligan;C.D. Bahl;J.M. Gilmore;P.J. Harvey;O. Cheneval;G.W. Buchko;S.V. Pulavarti;Q. Kaas;A. Eletsky;P.S. Huang;W.A. Johnsen;P.J. Greisen;G.J. Rocklin;Y. Song;T.W. Linsky;A. Watkins;S.A. Rettie;X. Xu;L.P. Carter;R. Bonneau;J.M. Olson;E. Coutsias;C.E. Correnti;T. Szyperski;D.J. Craik;D. Baker | "Accurate de novo design of hyperstable constrained peptides", Nature, 538, 329-335 | 10.1038/nature19791|27626386|0006|1476-4687|NATUAS | UK | Nmr solution structure of designed peptide nc_chh_d1 | de novo protein;designed peptide | null | null | null | null | 5kwz(0) | null | 7qxj(0.7118999958) | null | 1.10.287.730 | null |
5kx0 | 2016-09-21 | other | id:A;type:U;source:unknown;length:26;seq_nat:NPELQRKCKELDTRPEAERKCREESD;seq_unnat:NPELQRKCKEL(DAS)TR(DPR)(DGL)(DAL)(DGL)(DAR)(DLY)(DCY)(DAR)(DGL)(DGL)SD | 3,166.503 | null | ||||| | SOLUTION NMR | null | G. Bhardwaj;V.K. Mulligan;C.D. Bahl;J.M. Gilmore;P.J. Harvey;O. Cheneval;G.W. Buchko;S.V. Pulavarti;Q. Kaas;A. Eletsky;P.S. Huang;W.A. Johnsen;P.J. Greisen;G.J. Rocklin;Y. Song;T.W. Linsky;A. Watkins;S.A. Rettie;X. Xu;L.P. Carter;R. Bonneau;J.M. Olson;E. Coutsias;C.E. Correnti;T. Szyperski;D.J. Craik;D. Baker | "Accurate de novo design of hyperstable constrained peptides", Nature, 538, 329-335 | 10.1038/nature19791|27626386|0006|1476-4687|NATUAS | UK | Nmr solution structure of designed peptide nc_chh_dl_d1 | de novo protein;designed peptide | null | null | null | null | 5kx0(0) | null | 5kwz(0.6841999888) | null | 6.10.250.1960;4.10.180.60;6.10.250.400;1.20.5.640;4.10.180.10;6.10.250.1560;6.10.250.1110 | null |
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