How to use wwydmanski/modernbert-pubmed-v0.1 with sentence-transformers:
from sentence_transformers import SentenceTransformer model = SentenceTransformer("wwydmanski/modernbert-pubmed-v0.1") sentences = [ "Fluorescence quenching of tryptophan residues", "Fluorescence of buried tyrosine residues in proteins. ", "A fluorescence quenching study of tryptophanyl residues of (Ca2+ + Mg2+)-ATPase from sarcoplasmic reticulum. ", "Some hormonal influences on the acetylation of sulfanilamide in vivo. " ] embeddings = model.encode(sentences) similarities = model.similarity(embeddings, embeddings) print(similarities.shape) # [4, 4]
