litscrape_id
string
source_row_index
int64
binder_id
string
source_publication
string
target
string
label
int64
binding_affinity_nm
float64
target_sequence
string
binder_sequence
string
af2_model_name
string
af3_model_name
string
af2_complex_plddt
float64
af2_ptm
float64
af2_iptm
float64
af2_pae
float64
af2_ipae
float64
af2_min_ipae
float64
af3_ptm
float64
af3_iptm
float64
af3_chain_A_plddt
float64
af3_chain_A_pae
float64
af3_chain_A_ptm
float64
af3_chain_A_iptm
float64
af3_chain_B_plddt
float64
af3_chain_B_pae
float64
af3_chain_B_ptm
float64
af3_chain_B_iptm
float64
af3_iptm_A_B
float64
status
string
error
float64
litscrape_000400
400
il2ra_site1_2b5i_normal_mot_HHH_b2_04910_000000118_0001_1_19_H___HHH_b1_00058_af2_0001_0000900023_0000001_0
Bennet paper IL2Ra prospective
IL2Ra
0
null
ELCDDDPPEIPHATFKAMAYKEGTMLNCECKRGFRRIKSGSLYMLCTGNSSHSSWDNQCQCTSSATRNTTKQVTPQPEEQKERKTTEMQSPMQPVDQASLPGHCREPPPWENEATERIYHFVVGQMVYYQCVQGYRALHRGPAESVCKMTHGKTRWTQPQLICTG
SESEKATELFREADELDRRGNPEEAEEVLEEAAKIAEEAGNRLLLRMIEDALRQLK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.5564
0.286
0.1409
0.6347
0.788
0.4542
0.288647
0.110774
39.402201
21.973995
0.275497
0.110774
60.52567
5.095256
0.648502
0.110774
0.110774
ok
null
litscrape_000401
401
il2ra_site1_2b5i_normal_mot_HHH_b2_04910_000000118_0001_1_19_H___HHH_b1_03439_af2_0001_0000500022_0000001_0
Bennet paper IL2Ra prospective
IL2Ra
0
null
ELCDDDPPEIPHATFKAMAYKEGTMLNCECKRGFRRIKSGSLYMLCTGNSSHSSWDNQCQCTSSATRNTTKQVTPQPEEQKERKTTEMQSPMQPVDQASLPGHCREPPPWENEATERIYHFVVGQMVYYQCVQGYRALHRGPAESVCKMTHGKTRWTQPQLICTG
SETERAQELFREADELDKNGNPEEAEEVLQEAREFAERGGSRSLLRMIESALEQLKG
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.688
0.2953
0.0805
0.6713
0.8755
0.6958
0.29178
0.078642
43.062719
21.221052
0.290763
0.078642
75.87748
2.074299
0.786789
0.078642
0.078642
ok
null
litscrape_000402
402
il2ra_site1_1z92_sap_29_mot_HHH_b2_05274_af2_000000237_0001_23_40_H___HHH_b1_05027_0001_0000100001_0000001_0_0001
Bennet paper IL2Ra prospective
IL2Ra
0
null
ELCDDDPPEIPHATFKAMAYKEGTMLNCECKRGFRRIKSGSLYMLCTGNSSHSSWDNQCQCTSSATRNTTKQVTPQPEEQKERKTTEMQSPMQPVDQASLPGHCREPPPWENEATERIYHFVVGQMVYYQCVQGYRALHRGPAESVCKMTHGKTRWTQPQLICTG
SEVEKLVEEAVKLLDPNPRAQEFLKKHLERAVERGDKERVVKFLERFAKVANDPEVERLAEEIEE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.5138
0.3068
0.0763
0.7191
0.8791
0.6367
0.252034
0.064403
40.828133
21.780883
0.282294
0.064403
63.704985
6.590062
0.542323
0.064403
0.064403
ok
null
litscrape_000403
403
il2ra_site1_2b5i_sap_20_mot_HHH_b1_01934_af2_000000023_0001_42_56_H___317e649a6280ec284eb7dfe5badee235_0001_af2_0001_0000600013_0000001_0_0001_af2pred_dldesign_0_af2pred
Bennet paper IL2Ra prospective
IL2Ra
0
null
ELCDDDPPEIPHATFKAMAYKEGTMLNCECKRGFRRIKSGSLYMLCTGNSSHSSWDNQCQCTSSATRNTTKQVTPQPEEQKERKTTEMQSPMQPVDQASLPGHCREPPPWENEATERIYHFVVGQMVYYQCVQGYRALHRGPAESVCKMTHGKTRWTQPQLICTG
SKEEIKKEAEELIEELKKKGYNLPLRILEFALKEIEETNSEKYYEQLKKLIEKIKK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.4864
0.2929
0.0733
0.728
0.8727
0.5901
0.255758
0.071812
40.590926
21.973046
0.273874
0.071812
63.509266
4.523101
0.560142
0.071812
0.071812
ok
null
litscrape_000404
404
il2ra_site1_1z92_sap_18_mot_HHH_b1_05118_af2_000000199_0001_39_52_H___HHH_b2_02507_0001_0000700027_0000001_0_0001_af2pred_0001_af2pred
Bennet paper IL2Ra prospective
IL2Ra
0
null
ELCDDDPPEIPHATFKAMAYKEGTMLNCECKRGFRRIKSGSLYMLCTGNSSHSSWDNQCQCTSSATRNTTKQVTPQPEEQKERKTTEMQSPMQPVDQASLPGHCREPPPWENEATERIYHFVVGQMVYYQCVQGYRALHRGPAESVCKMTHGKTRWTQPQLICTG
SKLEEVEELLEELAKKDPLARELLEALEFLKRRGFPPRAILLLLVRDAERAGNPELAEAIHEILR
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6366
0.2935
0.0954
0.6503
0.8468
0.5901
0.312542
0.07807
39.445436
21.887429
0.277004
0.07807
72.098536
2.551401
0.743744
0.07807
0.07807
ok
null
litscrape_000405
405
il2ra_site1_1z92_sap_17_mot_HHH_b1_00368_000000203_0001_23_39_H___HHH_b2_03798_0001_0000300020_0000001_1_0001_af2pred_0001_af2pred_1
Bennet paper IL2Ra prospective
IL2Ra
0
null
ELCDDDPPEIPHATFKAMAYKEGTMLNCECKRGFRRIKSGSLYMLCTGNSSHSSWDNQCQCTSSATRNTTKQVTPQPEEQKERKTTEMQSPMQPVDQASLPGHCREPPPWENEATERIYHFVVGQMVYYQCVQGYRALHRGPAESVCKMTHGKTRWTQPQLICTG
SKTEEFRRLLELIQEALRNDDEELLEELLELLRELAEERNTKSAKILLEAAEEQA
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.4577
0.2944
0.1215
0.7092
0.8444
0.5949
0.269612
0.122001
43.861094
21.195965
0.303979
0.122001
57.720979
6.155793
0.454607
0.122001
0.122001
ok
null
litscrape_000406
406
il2ra_site1_2b5i_normal_mot_HHH_b2_04910_000000118_0001_1_19_H___HHH_b1_03377_af2_0001_0000100001_0000001_0_af2pred_dldesign_0_af2pred
Bennet paper IL2Ra prospective
IL2Ra
0
null
ELCDDDPPEIPHATFKAMAYKEGTMLNCECKRGFRRIKSGSLYMLCTGNSSHSSWDNQCQCTSSATRNTTKQVTPQPEEQKERKTTEMQSPMQPVDQASLPGHCREPPPWENEATERIYHFVVGQMVYYQCVQGYRALHRGPAESVCKMTHGKTRWTQPQLICTG
SLAKKALELFLKADELRQAGKEEEAKELLEEALELAKKAGANSLVKMIELALSQLE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7035
0.294
0.0909
0.647
0.838
0.5302
0.305618
0.091028
43.017055
21.372273
0.288199
0.091028
77.509484
1.948143
0.801383
0.091028
0.091028
ok
null
litscrape_000407
407
il2ra_site1_2b5i_normal_mot_f5ff40796168375b462bec8614a1db4a_0001_1_000000138_0001_53_65_H___56b0b67d579d3eef2422ecd748522aa9_0001_0001_0000300038_0000001_0_af2pred_dldesign_0_af2pred
Bennet paper IL2Ra prospective
IL2Ra
0
null
ELCDDDPPEIPHATFKAMAYKEGTMLNCECKRGFRRIKSGSLYMLCTGNSSHSSWDNQCQCTSSATRNTTKQVTPQPEEQKERKTTEMQSPMQPVDQASLPGHCREPPPWENEATERIYHFVVGQMVYYQCVQGYRALHRGPAESVCKMTHGKTRWTQPQLICTG
SLEEIAEELRKKNPEAYKLLKMAVKLLKRLGVPEEEIEKLLLELKEKEGSLEKATKALLEYALSQ
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7529
0.3105
0.0805
0.6487
0.8705
0.6405
0.31901
0.076765
42.375178
22.141228
0.271006
0.076765
79.122559
1.972519
0.813152
0.076765
0.076765
ok
null
litscrape_000408
408
il2ra_site1_1z92_normal_mot_HHH_b2_01414_000000212_0001_23_40_H___HHH_b2_03837_0001_0000200013_0000001_0_af2pred_0001_af2pred_1
Bennet paper IL2Ra prospective
IL2Ra
0
null
ELCDDDPPEIPHATFKAMAYKEGTMLNCECKRGFRRIKSGSLYMLCTGNSSHSSWDNQCQCTSSATRNTTKQVTPQPEEQKERKTTEMQSPMQPVDQASLPGHCREPPPWENEATERIYHFVVGQMVYYQCVQGYRALHRGPAESVCKMTHGKTRWTQPQLICTG
SLEELVKFLEEQARRAIELGNEKMVERLLEMLEEFAELAKDPEVEEIVRELEELLE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.4482
0.2919
0.106
0.7027
0.8435
0.6376
0.249755
0.081555
40.204797
22.172076
0.270121
0.081555
65.103829
4.698462
0.551465
0.081555
0.081555
ok
null
litscrape_000409
409
il2ra_site1_1z92_sap_20_mot_01209686ea234b34325f918445e6eade_0001_af2_000000144_0001_18_33_H___HHH_b2_05677_0001_0000400033_0000001_0_0001
Bennet paper IL2Ra prospective
IL2Ra
0
null
ELCDDDPPEIPHATFKAMAYKEGTMLNCECKRGFRRIKSGSLYMLCTGNSSHSSWDNQCQCTSSATRNTTKQVTPQPEEQKERKTTEMQSPMQPVDQASLPGHCREPPPWENEATERIYHFVVGQMVYYQCVQGYRALHRGPAESVCKMTHGKTRWTQPQLICTG
SLEERVKELAKELGNEEVAEKVEEIVRYDQRRSPRAAEFVLEAAIRKLELGNPESVERIVERLRR
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6156
0.3049
0.0764
0.6922
0.8853
0.6683
0.312499
0.07536
43.794757
20.425786
0.317758
0.07536
72.941556
2.527503
0.767402
0.07536
0.07536
ok
null
litscrape_000410
410
il2ra_site1_2b5i_sap_13_mot_0e5a94e4a5addaac739760efb25f0f5d_0001_000000246_0001_18_32_H___82bec63df566f723086b918040f44202_0001_0001_0000200008_0000001_0_0001_af2pred_dldesign_0_af2pred
Bennet paper IL2Ra prospective
IL2Ra
0
null
ELCDDDPPEIPHATFKAMAYKEGTMLNCECKRGFRRIKSGSLYMLCTGNSSHSSWDNQCQCTSSATRNTTKQVTPQPEEQKERKTTEMQSPMQPVDQASLPGHCREPPPWENEATERIYHFVVGQMVYYQCVQGYRALHRGPAESVCKMTHGKTRWTQPQLICTG
SPAEELYKKAEKLYKAGKYAEAEKALEEAIRLAEAAGLKKDVRFLKLALKQVKEAA
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.719
0.303
0.0705
0.6815
0.8814
0.6559
0.289909
0.068716
37.833233
21.945843
0.270629
0.068716
81.882674
1.858163
0.806384
0.068716
0.068716
ok
null
litscrape_000411
411
il2ra_site1_2b5i_sap_11_mot_HHH_b2_04633_000000097_0001_38_52_H___HHH_b2_06295_af2_0001_0000500028_0000001_0_0001_af2pred_dldesign_0_af2pred
Bennet paper IL2Ra prospective
IL2Ra
0
null
ELCDDDPPEIPHATFKAMAYKEGTMLNCECKRGFRRIKSGSLYMLCTGNSSHSSWDNQCQCTSSATRNTTKQVTPQPEEQKERKTTEMQSPMQPVDQASLPGHCREPPPWENEATERIYHFVVGQMVYYQCVQGYRALHRGPAESVCKMTHGKTRWTQPQLICTG
SPDLRELTRELLEKAKELEDKKLALKIATLALLTARKAEDEELIAEARALKEELLK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.752
0.3138
0.0706
0.6919
0.8979
0.7213
0.288135
0.067245
40.670002
21.822472
0.27377
0.067245
80.066688
2.265406
0.798641
0.067245
0.067245
ok
null
litscrape_000412
412
il2ra_site1_2b5i_normal_mot_HHH_b2_04910_000000118_0001_1_19_H___HHH_b1_06851_af2_0001_0000100003_0000001_0_af2pred_dldesign_0_af2pred
Bennet paper IL2Ra prospective
IL2Ra
0
null
ELCDDDPPEIPHATFKAMAYKEGTMLNCECKRGFRRIKSGSLYMLCTGNSSHSSWDNQCQCTSSATRNTTKQVTPQPEEQKERKTTEMQSPMQPVDQASLPGHCREPPPWENEATERIYHFVVGQMVYYQCVQGYRALHRGPAESVCKMTHGKTRWTQPQLICTG
SPEAEEALRLFLEASEAYAAGKEEEAKELLEKAKELAEKVGATSLLKLIESALKQVE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6786
0.3006
0.0887
0.6396
0.8296
0.4874
0.311306
0.095443
38.296774
22.138771
0.268791
0.095443
73.159125
2.063018
0.79324
0.095443
0.095443
ok
null
litscrape_000413
413
il2ra_site1_2b5i_sap_23_mot_88fc943612ced423dcb009f6e7ca9834_0001_000000059_0001_52_65_H___60fb664799c350b0a0cf2d90b88ec500_0001_0001_0000500036_0000001_0_0001_af2pred_dldesign_0_af2pred
Bennet paper IL2Ra prospective
IL2Ra
0
null
ELCDDDPPEIPHATFKAMAYKEGTMLNCECKRGFRRIKSGSLYMLCTGNSSHSSWDNQCQCTSSATRNTTKQVTPQPEEQKERKTTEMQSPMQPVDQASLPGHCREPPPWENEATERIYHFVVGQMVYYQCVQGYRALHRGPAESVCKMTHGKTRWTQPQLICTG
SPEYKKFLELIKEAEAARKAGDLDKAKELLEKALELAKKMKAKSLIKLVERALEEI
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6738
0.2889
0.0734
0.6825
0.8744
0.5873
0.298103
0.078272
37.273708
22.896625
0.245367
0.078272
76.632653
1.923844
0.806873
0.078272
0.078272
ok
null
litscrape_000414
414
il2ra_site1_2b5i_sap_10_mot_HHH_b1_08157_af2_000000055_0001_42_55_H___HHH_b2_07786_af2_0001_0000400028_0000001_0_0001_af2pred_dldesign_0_af2pred
Bennet paper IL2Ra prospective
IL2Ra
0
null
ELCDDDPPEIPHATFKAMAYKEGTMLNCECKRGFRRIKSGSLYMLCTGNSSHSSWDNQCQCTSSATRNTTKQVTPQPEEQKERKTTEMQSPMQPVDQASLPGHCREPPPWENEATERIYHFVVGQMVYYQCVQGYRALHRGPAESVCKMTHGKTRWTQPQLICTG
SPILEELDALYDKAKDAGNKEAMKLVIKARYGYETKTWNEEEIKKLIEEAKRLLE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7771
0.3177
0.0773
0.6713
0.8694
0.5606
0.29423
0.080152
42.474385
21.570405
0.281121
0.080152
76.744863
2.009689
0.784195
0.080152
0.080152
ok
null
litscrape_000415
415
IL2raBeBind_lt20
Bennet paper IL2Ra prospective
IL2Ra
1
null
ELCDDDPPEIPHATFKAMAYKEGTMLNCECKRGFRRIKSGSLYMLCTGNSSHSSWDNQCQCTSSATRNTTKQVTPQPEEQKERKTTEMQSPMQPVDQASLPGHCREPPPWENEATERIYHFVVGQMVYYQCVQGYRALHRGPAESVCKMTHGKTRWTQPQLICTG
SREAAKKWSEIVDEIAEEFGDSEELLKELDRTAVRLIVRGVGEEEFEKQLRELAEQY
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.652
0.3069
0.0929
0.651
0.8398
0.535
0.2968
0.082595
37.651935
22.594626
0.251595
0.082595
72.098875
2.656707
0.763172
0.082595
0.082595
ok
null
litscrape_000416
416
IL2raBeBind_lt2
Bennet paper IL2Ra prospective
IL2Ra
1
null
ELCDDDPPEIPHATFKAMAYKEGTMLNCECKRGFRRIKSGSLYMLCTGNSSHSSWDNQCQCTSSATRNTTKQVTPQPEEQKERKTTEMQSPMQPVDQASLPGHCREPPPWENEATERIYHFVVGQMVYYQCVQGYRALHRGPAESVCKMTHGKTRWTQPQLICTG
SREEAKKWAEIVDEIAEEFGDSEELLKELDRIAVRLIARGVSEEELEKKLREFAEQY
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.4937
0.2949
0.0887
0.7181
0.8675
0.6426
0.272094
0.077437
39.094801
22.136492
0.264421
0.077437
67.064004
3.762578
0.611389
0.077437
0.077437
ok
null
litscrape_000417
417
IL2raBeBind_lt8
Bennet paper IL2Ra prospective
IL2Ra
1
null
ELCDDDPPEIPHATFKAMAYKEGTMLNCECKRGFRRIKSGSLYMLCTGNSSHSSWDNQCQCTSSATRNTTKQVTPQPEEQKERKTTEMQSPMQPVDQASLPGHCREPPPWENEATERIYHFVVGQMVYYQCVQGYRALHRGPAESVCKMTHGKTRWTQPQLICTG
SREKEKKWSEIVDEIAEEFGDSEELLKELDRTAVRLIARGVSEEEFEKLLRELAEQY
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.671
0.3084
0.0903
0.6572
0.8481
0.5741
0.293084
0.08685
39.520799
22.231387
0.260494
0.08685
74.288469
2.644361
0.752066
0.08685
0.08685
ok
null
litscrape_000418
418
il2ra_site1_2b5i_normal_mot_0e5a94e4a5addaac739760efb25f0f5d_0001_000000289_0001_18_32_H___9d357ee8e4c3001c8713547a749ea8a2_0001_1_0001_0000200010_0000001_1_af2pred_dldesign_0_af2pred
Bennet paper IL2Ra prospective
IL2Ra
0
null
ELCDDDPPEIPHATFKAMAYKEGTMLNCECKRGFRRIKSGSLYMLCTGNSSHSSWDNQCQCTSSATRNTTKQVTPQPEEQKERKTTEMQSPMQPVDQASLPGHCREPPPWENEATERIYHFVVGQMVYYQCVQGYRALHRGPAESVCKMTHGKTRWTQPQLICTG
SVDDVLDAAADAAYDAGRRELADLLIRVRYLVEIGHPERARKLLEEALARHGDPLLREALEALEK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7342
0.3218
0.096
0.6185
0.8248
0.4561
0.340627
0.105081
40.878423
21.431403
0.283865
0.105081
76.451234
1.919957
0.817583
0.105081
0.105081
ok
null
litscrape_000419
419
il2ra_site1_1z92_sap_15_mot_HHH_b2_03658_000000138_0001_39_56_H___HHH_b2_00767_0001_0000100004_0000001_0_0001_af2pred_0001_af2pred_1
Bennet paper IL2Ra prospective
IL2Ra
0
null
ELCDDDPPEIPHATFKAMAYKEGTMLNCECKRGFRRIKSGSLYMLCTGNSSHSSWDNQCQCTSSATRNTTKQVTPQPEEQKERKTTEMQSPMQPVDQASLPGHCREPPPWENEATERIYHFVVGQMVYYQCVQGYRALHRGPAESVCKMTHGKTRWTQPQLICTG
SVREQLRELLEELGVPPEEIEAVLRDLEHTTRAYGDPEQALKALLRAARDFGDEVLKEAVELLLK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7415
0.3381
0.1092
0.5995
0.8064
0.4453
0.326118
0.088798
40.39295
21.381884
0.283546
0.088798
74.566257
1.98414
0.791915
0.088798
0.088798
ok
null
litscrape_000420
420
il2ra_site1_1z92_normal_mot_HHH_b2_01902_af2_000000252_0001_25_40_H___HHH_b2_05321_0001_0000200026_0000001_0
Bennet paper IL2Ra prospective
IL2Ra
0
null
ELCDDDPPEIPHATFKAMAYKEGTMLNCECKRGFRRIKSGSLYMLCTGNSSHSSWDNQCQCTSSATRNTTKQVTPQPEEQKERKTTEMQSPMQPVDQASLPGHCREPPPWENEATERIYHFVVGQMVYYQCVQGYRALHRGPAESVCKMTHGKTRWTQPQLICTG
TEEENFARQAVRIAVRIAGLSEEQEKLLQELAEELLEEGVDPLEIAKLLDRLAAELE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.4633
0.2815
0.113
0.6846
0.828
0.5677
0.246077
0.091696
39.983616
22.225245
0.267112
0.091696
60.021309
5.343612
0.510651
0.091696
0.091696
ok
null
litscrape_000421
421
il2ra_site1_1z92_sap_19_mot_HHH_b1_06519_000000232_0001_23_40_H___HHH_b2_02374_0001_0000400018_0000001_0_0001_af2pred_0001_af2pred_1_swapped
Bennet paper IL2Ra prospective
IL2Ra
0
null
ELCDDDPPEIPHATFKAMAYKEGTMLNCECKRGFRRIKSGSLYMLCTGNSSHSSWDNQCQCTSSATRNTTKQVTPQPEEQKERKTTEMQSPMQPVDQASLPGHCREPPPWENEATERIYHFVVGQMVYYQCVQGYRALHRGPAESVCKMTHGKTRWTQPQLICTG
TLMERELKEAVEKNDEELLEKFIKLLLKDAGSPKLVEKLLEILVRRLGLPPEVLEKLRELLEELT
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6496
0.2963
0.0893
0.6591
0.8528
0.5798
0.311637
0.071695
41.92443
22.333237
0.269186
0.071695
76.355698
2.393211
0.777512
0.071695
0.071695
ok
null
litscrape_000422
422
p53_design_9
RFDiffusion
Mdm2
1
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
AAARRAERERVLREFLAWLRDRKDTVTREEAEALQAYLDYLLKWEELDRKENPTFEEIWSLQPHSKEEATRIARAEEWLSAEERELAERAVRVLLELDEEEQRRYRAEVEAIFRELL
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.8303
0.5796
0.1763
0.3551
0.6876
0.3066
0.586311
0.152566
59.439547
10.658298
0.521831
0.152566
83.605532
2.944642
0.854378
0.152566
0.152566
ok
null
litscrape_000423
423
p53_design_8
RFDiffusion
Mdm2
1
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
AEAEAYKKEVEEKIAADPILQLLNLMLEVMDKDRETAEKEIREKAKELGLSELTIEAILKLFRLRSPEPQNFEELWALQPDSPEMAEVLEELEEKLEELEKLKKELEKKV
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.8228
0.5655
0.1759
0.3585
0.667
0.3519
0.546996
0.145688
60.688885
11.023592
0.504453
0.145688
80.170861
4.478259
0.801285
0.145688
0.145688
ok
null
litscrape_000424
424
p53_design_95
RFDiffusion
Mdm2
0
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
AEAEELVKKDEALTFEEIFSLQPESPEDADDLCKATEEARKEAEKKYKDLDEEKKEKAVNAVVFEAAKKWKEEKEKKE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7916
0.5062
0.1441
0.39
0.6656
0.3188
0.499116
0.136808
56.009939
12.827043
0.469951
0.136808
77.764217
2.949122
0.815767
0.136808
0.136808
ok
null
litscrape_000425
425
p53_design_33
RFDiffusion
Mdm2
0
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
AEEERRREELRRELEVEKEIKLLELLAEMDPSRKEVCEKLIKRLKEAVKKGKSKEEIEAELTFEELWSLQPWSPEEYEKLEKLEEELEREAEEKLRRA
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.8166
0.5732
0.2029
0.3373
0.6227
0.2831
0.550698
0.155263
56.021287
12.115925
0.472279
0.155263
78.7375
3.046405
0.836566
0.155263
0.155263
ok
null
litscrape_000426
426
p53_design_91
RFDiffusion
Mdm2
1
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
AKEKAEKLYKEIKEIADKVFEELKKKDLEEVKEEEEAFTFEELWSLIPESEEEYEILAYVDELREKEWEKVKEKAEELEKEDPEKGKKLLAAFEVAWMKGEIEVKKKLEE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.8422
0.6085
0.2243
0.3163
0.6122
0.2537
0.595857
0.173216
56.297715
12.442095
0.449421
0.173216
83.575874
2.426337
0.878494
0.173216
0.173216
ok
null
litscrape_000427
427
p53_design_66
RFDiffusion
Mdm2
0
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
AMLSDEEYAELDAKVTFEAYWRLIPQNDEQYRRYAEGDAEEQIAVLEEIAEEAAAEASEEEAKQIRDAAKVIAHDIAKEK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6371
0.4086
0.1172
0.4742
0.6943
0.4178
0.412566
0.112468
62.946033
8.972801
0.557976
0.112468
70.94869
6.568184
0.649053
0.112468
0.112468
ok
null
litscrape_000428
428
p53_design_80
RFDiffusion
Mdm2
0
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
DAVVAEMREEVAKMGPVSFRDYFELLPKSDEEAKGLIEVEEKDPEFVQAATDLLAALRPHLSEEELEELRAMLCDAERLEEAGRRLVERARAV
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.3922
0.3593
0.1218
0.6318
0.7235
0.4588
0.30937
0.097382
53.57636
11.979604
0.474684
0.097382
48.351767
15.164773
0.319882
0.097382
0.097382
ok
null
litscrape_000429
429
p53_design_59
RFDiffusion
Mdm2
1
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
DEEIAKKGLELRKEYKEEFRRLMEEEGLSEKEVVELARKRAEENKDDPLEVAAIKLAASEMLTDDSTFEDIFSLLPETKEEAYYMILIEELEEKEKK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7694
0.5563
0.211
0.3493
0.589
0.277
0.548584
0.163506
55.73608
12.050742
0.452473
0.163506
79.101854
3.461666
0.840362
0.163506
0.163506
ok
null
litscrape_000430
430
p53_design_60
RFDiffusion
Mdm2
1
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
DEELEEALEELIELYEKKMEEGLKEGLDASSLIGAVREILREEGLSEDVVEKIVSRLQEKFGAEEGPYTFESIWSLLPESKEEAEKEEKCIDVLVEEKKRRAA
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.4696
0.3708
0.0983
0.6224
0.78
0.5739
0.375141
0.170448
64.862252
8.02051
0.60781
0.170448
58.447419
10.409778
0.497663
0.170448
0.170448
ok
null
litscrape_000431
431
p53_design_30
RFDiffusion
Mdm2
0
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
DEELRKKVFEELEKESESKDEEFKKSLEEYKKLEEKWKELEKKEETFEDIWSLQPQSDEEYKRISEFEEIFNKRLEEMKKK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.4503
0.4011
0.1366
0.6339
0.7269
0.4342
0.367322
0.098464
61.553198
9.19401
0.559535
0.098464
53.686834
14.562632
0.329251
0.098464
0.098464
ok
null
litscrape_000432
432
p53_design_84
RFDiffusion
Mdm2
1
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
DELEEEARRRLRELAERLEELREEHAEEFERAEKKVTFEDIWRLQPWSDKWYRVMAADPEVSERLVELVAVAEQVVREEAPEELRERCEELVREFRELREEVERG
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.8105
0.586
0.2106
0.3368
0.6103
0.2869
0.578126
0.174242
64.783489
9.612032
0.545608
0.174242
82.337649
2.794423
0.858978
0.174242
0.174242
ok
null
litscrape_000433
433
p53_design_50
RFDiffusion
Mdm2
1
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
DELKEKATKEVQEFIEKNKETAEEFKKKLDKPLTFEEIWSTQPQSDDEAMVLMMIPDELDKELHEIEAICRAALKSGDEELEKKAKEILEEFRKMMEKLVKEYKEAVA
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.5011
0.3678
0.1394
0.5745
0.7445
0.4403
0.480701
0.179852
63.518687
7.979099
0.611951
0.179852
63.697746
6.481102
0.649044
0.179852
0.179852
ok
null
litscrape_000434
434
p53_design_77
RFDiffusion
Mdm2
1
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
DELRRLADEYLEKVKKAAELMAKAGEEAKEAGEKYVEYWKEAVEKAEAAPTPKDAAKVLEEAENNLPFELLFGLIPTSADKETALELAKKADEELKEAEKLLEEFKKKAEEAE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.655
0.4393
0.1759
0.4411
0.6779
0.3819
0.5793
0.2646
64.216404
9.712429
0.530335
0.2646
79.867029
4.135117
0.753762
0.2646
0.2646
ok
null
litscrape_000435
435
p53_design_92
RFDiffusion
Mdm2
0
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
DIKEELEKEKKELEEKAKDCPPLTFEELFSLLPDTLEDAEVIMKLSSEECKLLMEAMALKARIKIAESGKEEEREKIMEECREELVKRAKEIVEK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.8259
0.5627
0.1837
0.3461
0.6269
0.2847
0.558398
0.154149
54.78306
11.840442
0.472051
0.154149
81.978644
2.289337
0.867729
0.154149
0.154149
ok
null
litscrape_000436
436
p53_design_70
RFDiffusion
Mdm2
1
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
DKCLEAIREFAEKVEALKPKAESKLKEFGVKVSFEDYWATIPDSDEVAECMMKADDEVVETIVDATAAVRAYLKVAKEKGVDVEEAEALAKEVEEAREELEKICKEEAKR
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.8546
0.5882
0.1923
0.3314
0.6431
0.284
0.594763
0.190781
60.3265
10.369299
0.511925
0.190781
83.022142
2.73227
0.863593
0.190781
0.190781
ok
null
litscrape_000437
437
p53_design_14
RFDiffusion
Mdm2
0
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
DKEKALEEIEKKFKKVYEKLKKEIEKLAKELGVSKETVERAIKIYIEEKLYEKKLELLDKYGETFEEVWKMQPDSIEDIERDERVLASLSEENKEKIKKYVLEKAYEEGLVSKEEWEEFK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.759
0.5548
0.1804
0.3886
0.6799
0.3305
0.573678
0.196504
63.318566
8.59742
0.563213
0.196504
77.241581
4.785372
0.786437
0.196504
0.196504
ok
null
litscrape_000438
438
p53_design_86
RFDiffusion
Mdm2
1
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
DVLEKLAKEVREKVEKMLKEKPKTPEVLTEAACLLEAASQVLAEHGATFEQLFSMLPWSKEVAEAFLKAYEEDPEGVEKMIEEYRKEVEKKLEELK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.789
0.5608
0.1933
0.3456
0.6123
0.2755
0.545262
0.174015
59.500616
10.007448
0.515143
0.174015
78.770945
3.446183
0.818175
0.174015
0.174015
ok
null
litscrape_000439
439
p53_design_69
RFDiffusion
Mdm2
0
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
EEEEEREKRCEEIAEKIVEMKEKGTLTLEELWELTDGIDLDESELITEYLEKRIPEEEWTFEEIWALQPTV
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7832
0.4962
0.1758
0.3731
0.5925
0.3246
0.488786
0.177291
67.609835
8.948293
0.570076
0.177291
78.755715
3.092799
0.79624
0.177291
0.177291
ok
null
litscrape_000440
440
p53_design_25
RFDiffusion
Mdm2
0
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
EEEEERERRLELYKRAIDRKVRARELEKRPSTFEELWSLLPHSREEAEAEEELESERRAEVLALLREEDTPEAAEAVARLEALEAEEA
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.5648
0.3902
0.1554
0.5467
0.7285
0.3735
0.351057
0.133601
61.889418
11.079187
0.516806
0.133601
66.550246
10.457239
0.487199
0.133601
0.133601
ok
null
litscrape_000441
441
p53_design_38
RFDiffusion
Mdm2
1
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
EEEEREELIKYGKEHEDELDKYEKEAWELMTEEQQKEYKERLAEKEKTENFEELWSKLPQSEEEYYLMIARKIKTCEKIIKLKKSIPTEGEKAKKEFEKTVKEWIEWEVN
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.8407
0.5902
0.2017
0.3375
0.6366
0.2733
0.563738
0.15823
59.610133
10.9661
0.497152
0.15823
81.760707
3.739742
0.830904
0.15823
0.15823
ok
null
litscrape_000442
442
p53_design_28
RFDiffusion
Mdm2
1
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
EEEKERRERLEKIRKYLLKLLKKIAELLNSEEAAKLAKEMEEKEFLTTEELCEAYEKTLEILDSDENVTFEQLFALQPESDEEYEVLVYLEEEIKKLKE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.8053
0.5613
0.1782
0.3584
0.6513
0.3113
0.546038
0.144212
60.717692
11.483848
0.492297
0.144212
80.372282
2.980725
0.835759
0.144212
0.144212
ok
null
litscrape_000443
443
p53_design_67
RFDiffusion
Mdm2
0
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
EEEKKKKERAKKVANEIVEKFEAGTLTIEELEELTDGMDLEESELVWEILEKKIPEEKWTFEQIWALQPTV
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6468
0.4176
0.1352
0.4616
0.6588
0.3507
0.439044
0.121261
65.700679
8.085711
0.587592
0.121261
73.590803
4.128768
0.740998
0.121261
0.121261
ok
null
litscrape_000444
444
p53_design_3
RFDiffusion
Mdm2
0
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
EEELEEKLQEFLDWAVKKLEEFAKFVGEKLTFKEIFSLQPWSTNPLETIESTTEELKKVMKKLLEKAKKKDPENKEKYEKYYEEILKEIDEKLEEWKKEL
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.8046
0.5424
0.1599
0.3752
0.6677
0.3555
0.547853
0.179023
64.445425
8.971113
0.564381
0.179023
79.385102
3.695375
0.79619
0.179023
0.179023
ok
null
litscrape_000445
445
p53_design_21
RFDiffusion
Mdm2
1
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
EEELEETIEKIREWLEKGVLRKVLEKRRKLKSLTENDTFEEIFSLLPESDEEAEALDFLDSLPEELREALEEMFASLSEEDTLDEEVERIRELLEE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7886
0.5511
0.2211
0.3573
0.6187
0.2876
0.514598
0.167628
65.861612
9.522042
0.536499
0.167628
81.810275
4.608084
0.746543
0.167628
0.167628
ok
null
litscrape_000446
446
p53_design_7
RFDiffusion
Mdm2
1
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
EELKKELEKELNKLKASGYTETFEDIWRLQPTSDKEYKELVELEEEARKEFDEETVELLKEIVRLKAVKEGKDFDYFFKELKEKFEELKKK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.8538
0.671
0.4485
0.2261
0.3605
0.1346
0.584929
0.275644
64.023942
10.261922
0.538709
0.275644
82.788292
2.717484
0.841917
0.275644
0.275644
ok
null
litscrape_000447
447
p53_design_93
RFDiffusion
Mdm2
1
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
EEMEKVIKEAVEKAKKIYEELKALKEKELPDEKLTFEEIFSCLPQTKHEAMVIMQMSDEDSILYAEACALLNFLKAAAEKDPEKLSEEAKAKVAEAEKEFKEIREKMREVAEKVV
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7901
0.5832
0.198
0.3426
0.6242
0.2964
0.568108
0.155763
58.47991
11.066494
0.506665
0.155763
80.510732
3.528442
0.817259
0.155763
0.155763
ok
null
litscrape_000448
448
p53_design_81
RFDiffusion
Mdm2
1
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
EETKKKKKIIVELWQEVQARHKEISPLDLYFIHEACVELLDEIGADFESLFSLLPQSKEAAEALIKGYEEAEKMSKEEYEEKLKKAKEEVEKEVEKRLEEEEK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.8226
0.5913
0.209
0.326
0.6039
0.2687
0.570037
0.18909
61.877852
10.018445
0.518565
0.18909
81.607661
3.491158
0.835217
0.18909
0.18909
ok
null
litscrape_000449
449
p53_design_42
RFDiffusion
Mdm2
1
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
EIDKIVESKSIEELLEEIIKELDELYKKEKNTKNKIELLVWREFLLEQKGATFEELWRLQPQSDEEYKELVENEELYESVRKELEKMASEPLREQLRRALEFIEKVKK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.8229
0.6191
0.2907
0.3016
0.5434
0.256
0.526955
0.134361
58.972684
9.990308
0.534437
0.134361
78.244715
4.60487
0.780877
0.134361
0.134361
ok
null
litscrape_000450
450
p53_design_10
RFDiffusion
Mdm2
1
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
EIEKLLSKLTFEELWSLQPQSKEEYEWELKNPEIVEDKRKIKELEIIKERVDEETAKKIEKEIKEIKEKIK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6523
0.4019
0.1139
0.5338
0.7277
0.4444
0.363043
0.097382
60.030934
10.252764
0.524935
0.097382
67.067582
9.431724
0.570238
0.097382
0.097382
ok
null
litscrape_000451
451
p53_design_23
RFDiffusion
Mdm2
1
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
EISLEEMLAYLKEKGSDDEEKLKKGKKLYEEFEKKEKEIEAKENPTFEEIWSLQPHSKEEAELIEFYEKKKEEVEKEK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.4604
0.3941
0.088
0.6594
0.7714
0.5119
0.377797
0.112695
63.357431
8.732976
0.577445
0.112695
52.146795
16.249931
0.352777
0.112695
0.112695
ok
null
litscrape_000452
452
p53_design_89
RFDiffusion
Mdm2
1
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
EKAKEEAEKIAKEYLDAGMSEEAAEAAVKIVEKVAKGEVPSFKDIWALIPESPEQVEPVEKIWKKLEELIEKIKKE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.5137
0.3735
0.1045
0.5688
0.716
0.4174
0.332855
0.092461
54.799834
12.298907
0.490269
0.092461
55.830868
12.889189
0.425703
0.092461
0.092461
ok
null
litscrape_000453
453
p53_design_40
RFDiffusion
Mdm2
1
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
EKEEKIQKLEEELKYLKENREVFLKIIERKKKLKELEKNPNQTFEELWSTLPDTLEEAEFLLSMSDYLWKLVEETIEKYPDLSTEELFELIMKKLEEEIEKLK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.8249
0.573
0.1952
0.3418
0.624
0.2931
0.518409
0.131452
52.679974
12.381123
0.45815
0.131452
77.861829
4.495935
0.781645
0.131452
0.131452
ok
null
litscrape_000454
454
p53_design_78
RFDiffusion
Mdm2
0
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
EKEKKIEEIESKLTFEEVWKLQPTSREQYEILEKKAEEVKDLSPLEQRVVEWDLMAELNKDELSEETIKKVQELVDALK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.8143
0.5122
0.1598
0.3736
0.6421
0.3079
0.517474
0.176258
62.271809
10.161874
0.528718
0.176258
78.556892
2.642364
0.815593
0.176258
0.176258
ok
null
litscrape_000455
455
p53_design_64
RFDiffusion
Mdm2
1
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
ELEEELKKYEEELKELEKKVPLPFSVLFNLQPTSKKVYEEDPKAWDVEVTKILVEVAKKLLEGASEEEAVKFAEEKVDEAEKKILEKV
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7339
0.5213
0.1729
0.379
0.6176
0.3138
0.541969
0.202112
64.186777
9.851742
0.540675
0.202112
78.571032
3.553581
0.796635
0.202112
0.202112
ok
null
litscrape_000456
456
p53_design_12
RFDiffusion
Mdm2
0
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
ELEEFEKGVKLYFELEFKWEVVESKPNPTFEELWSLLPQSREEYELIEKVEKKLKEELSEEEKEILKKVEEEKKKKLKEYKEKK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7602
0.642
0.4676
0.2527
0.3932
0.1352
0.495372
0.139438
55.017064
11.937938
0.435846
0.139438
75.87656
3.575291
0.763497
0.139438
0.139438
ok
null
litscrape_000457
457
p53_design_63
RFDiffusion
Mdm2
0
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
ELEKKLKEAKKEAEELEKKVPISFEVLFNTQPRSKEVFEKAPEEWELKREEILVEVLKKKLEGASEEELVKFAEEKTEEAEKEIKEKV
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.8077
0.5543
0.2066
0.3437
0.5911
0.2727
0.535887
0.167976
61.459421
10.631856
0.516732
0.167976
79.628537
2.91643
0.825949
0.167976
0.167976
ok
null
litscrape_000458
458
p53_design_11
RFDiffusion
Mdm2
1
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
ELKKEIEKLIEKKKEEFEKELEKYSEEKREQLSLAFNLKVEEFKLELFGETFEDIWSLLPHSRKEAEILEAAEKSGLKEIIEKYEKELKEEVEKLKK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6132
0.3829
0.1289
0.5152
0.7236
0.4548
0.442149
0.121222
64.648199
7.966794
0.580004
0.121222
70.035193
7.112906
0.635798
0.121222
0.121222
ok
null
litscrape_000459
459
p53_design_49
RFDiffusion
Mdm2
1
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
ELTEEEAKELLERYYATTFEEIFSTIPTSDEQFEKTAEVMAEREEAVREAERLLAEGGDIVEAGEAVKRAFECEKILKEANE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.5823
0.3994
0.1249
0.5294
0.6951
0.4412
0.42526
0.105803
66.80945
10.054183
0.541059
0.105803
71.706684
6.188737
0.662573
0.105803
0.105803
ok
null
litscrape_000460
460
p53_design_41
RFDiffusion
Mdm2
1
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
EMEKEKKKLIEEFLKEVVKLICEKKGTPEEEERRYLYIKLELEWKLLESTENPTFEEIWSLQPKSKEEYEMIEKYEKEASEEEKKEDEELVKELVEISKLDSLEEIKEKCEKYLEELKKK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.8389
0.6233
0.2485
0.3256
0.6248
0.2923
0.591472
0.165849
58.908396
11.562371
0.48536
0.165849
80.06488
3.324327
0.849479
0.165849
0.165849
ok
null
litscrape_000461
461
p53_design_43
RFDiffusion
Mdm2
0
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
EREELERRLAELLERAREKLRRFEELEKNPQPTFEEIWSQQPESDLEYLALELLEAEREGAPAEELARLRAELEEAVR
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7654
0.6466
0.5297
0.2332
0.3587
0.1224
0.460619
0.1362
56.586362
11.574108
0.454891
0.1362
74.463855
3.8199
0.709654
0.1362
0.1362
ok
null
litscrape_000462
462
p53_design_51
RFDiffusion
Mdm2
1
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
EREKLAEEAREAEKKAKEYEKKIEEHAKKGDLEGVANTIKEAAEELEPILERATAAGIKPTFEDYFSLIPSTDELATCILQMDDETQKVYEKYVEARAYARAAIREAEAEEAA
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.8425
0.5954
0.1867
0.3354
0.6559
0.2719
0.592361
0.166281
54.220492
12.139006
0.469022
0.166281
83.775735
2.635574
0.877428
0.166281
0.166281
ok
null
litscrape_000463
463
p53_design_57
RFDiffusion
Mdm2
0
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
FEELREKAREVLEKLAKRVVEETGVSEERAKEIVEKRFKCAEEGDLKAFEDYLDEKGWTFAEIWWLQPQSKEEYEILKAFEDAVKAK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7821
0.5116
0.1663
0.3742
0.6464
0.3208
0.503532
0.165967
60.400427
9.821572
0.548128
0.165967
76.489886
3.294072
0.763693
0.165967
0.165967
ok
null
litscrape_000464
464
p53_design_90
RFDiffusion
Mdm2
1
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
KEEIIKEAIETVKLANEDPSVSKEELAKIKALASFLIEEFSDVPYTFEELWSLQPQSKEEFEIMEKILDELREKRKKDKEKAVKEAIEELKKIGEKLKARKAK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.8332
0.5773
0.1783
0.3469
0.6527
0.2861
0.557821
0.144173
53.34158
12.506076
0.443897
0.144173
79.778778
3.038068
0.846365
0.144173
0.144173
ok
null
litscrape_000465
465
p53_design_65
RFDiffusion
Mdm2
1
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
KERLLALLRAGNEESKRLAELVEQVEKISLEECLEQARKLVEELGPETFEEIFSTLPQSDEEATLLKEVYDLDKDAEEFVYEVCVALRKLGWSEEELDECRRLLLEYMLELLK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.4195
0.3685
0.0905
0.6659
0.8169
0.6253
0.28184
0.064446
51.379265
12.422456
0.489827
0.064446
48.444131
16.136943
0.347698
0.064446
0.064446
ok
null
litscrape_000466
466
p53_design_31
RFDiffusion
Mdm2
0
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
KKEKIEELVKLYALFLNEYEENATDSDTFEQIFGMLPKSKELAELIFPKQEELKKELSKMSEEEKEKLWEEALKKCKELGIDMEYDKNDMDSIRKIIEELEEKIKEEL
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7787
0.5958
0.2645
0.3364
0.5555
0.276
0.549008
0.207041
64.194441
9.613783
0.547133
0.207041
76.948159
5.310757
0.755377
0.207041
0.207041
ok
null
litscrape_000467
467
p53_design_37
RFDiffusion
Mdm2
0
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
KKLLIKVEQGEEKEETFEEIFSLQPTSDDKRDLWLEWRDFFEELVEKAKGKPLEVEVEFKGTEEELEEIKKEMEKMAEIYGYKIEITEL
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.4957
0.3899
0.0892
0.6058
0.7877
0.5561
0.407561
0.116742
64.90965
8.14571
0.601773
0.116742
64.782136
8.596463
0.601285
0.116742
0.116742
ok
null
litscrape_000468
468
p53_design_94
RFDiffusion
Mdm2
1
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
KLADFVREQTADLPPEAQEALVARMEAHAVMLACEKMGVQVSFEQAFATLPQTKEEAEALIKIYDEHGEKLDKLLEEQAEELIKEKNLDKEGWLKLLEEAVARAREAEERLSAARRAAA
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.8443
0.62
0.2251
0.3028
0.6001
0.2453
0.607272
0.201314
54.888281
11.719126
0.455111
0.201314
82.769536
3.005946
0.858058
0.201314
0.201314
ok
null
litscrape_000469
469
p53_design_76
RFDiffusion
Mdm2
0
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
KYEEILKEAAKLLIEVAKKYPDLSIKELCEIAEKEATDNLKKAAIREICSRIAVRLGATFEELFSLLPDSKEEAEALFELHEAYEKNKEKFGKIIDETVKELIEIKKK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.786
0.5739
0.2195
0.3329
0.5973
0.3028
0.557652
0.166394
55.872653
10.94657
0.501272
0.166394
77.966745
3.493982
0.8149
0.166394
0.166394
ok
null
litscrape_000470
470
p53_design_13
RFDiffusion
Mdm2
1
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
LEEKIKKAREEREKLEKELLEKYKEGGSLEELKKLYEEIEKKREEILKLIKEKNGQETFEEIWSLLPDSIETYTVFEKIEKE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7877
0.5228
0.1694
0.3793
0.6348
0.2882
0.438833
0.137056
63.133377
10.398646
0.528617
0.137056
74.508983
6.403876
0.68577
0.137056
0.137056
ok
null
litscrape_000471
471
p53_design_55
RFDiffusion
Mdm2
1
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
LREAVEKAFEELEDKLTFEFVWSLIPETDEEAEKLINGDEDEQAKYIVKRMEKIAKSRNDEIGKEAKELLKKIKELL
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7837
0.5358
0.2278
0.3324
0.5501
0.2289
0.489261
0.140396
51.603912
12.972334
0.438806
0.140396
75.142642
2.778092
0.796616
0.140396
0.140396
ok
null
litscrape_000472
472
p53_design_87
RFDiffusion
Mdm2
1
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
MAAAAAAFEKLVEYLKKKGKETGGEAAAEYVAAQMVRDAGGAAADPAFGAILEKRIAEMEEKSQKEGAITFQDIWNLQPHSPEEYEEIDALVDETVAAAAAAGAAAA
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.8212
0.573
0.1737
0.3527
0.6562
0.3749
0.567741
0.162975
62.206714
10.956813
0.512587
0.162975
82.677664
3.381038
0.846558
0.162975
0.162975
ok
null
litscrape_000473
473
p53_design_48
RFDiffusion
Mdm2
0
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
MEALEKVKEKIKKRWEEAKKRAIEKGKWTFEDYFSLLPESDEEATVMVEHSEEIEKLIEELEEEAEKELAEAKA
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7246
0.4769
0.1674
0.391
0.6231
0.2959
0.471087
0.148026
57.061158
10.968761
0.503427
0.148026
73.218812
3.585765
0.745168
0.148026
0.148026
ok
null
litscrape_000474
474
p53_design_44
RFDiffusion
Mdm2
0
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
MEDLKRAWEKVVRWELIKVFPSESETFEELWSLQPDSPKEAEIMAELLEYCEKRKEELEGAKTPEEFIEILKEIVEEFCREKGVEEAVPELKEIVEEVVKEYFE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.5003
0.3716
0.0996
0.565
0.764
0.5637
0.439263
0.133798
63.376648
9.009865
0.581848
0.133798
63.606106
8.653483
0.626061
0.133798
0.133798
ok
null
litscrape_000475
475
p53_design_54
RFDiffusion
Mdm2
1
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
MEEEVKEEFEKMYEELKKAAEKLKVESTFESLFSLLPQSDKEALYVEKVLDVVGEEKYLEFTEYYAKVREAAAQGDEEAKKLLEEIEKRRKEMAERVAEAV
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.814
0.5818
0.2249
0.327
0.5843
0.2496
0.567227
0.184666
57.076744
11.799016
0.46664
0.184666
81.012585
3.057169
0.842901
0.184666
0.184666
ok
null
litscrape_000476
476
p53_design_61
RFDiffusion
Mdm2
1
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
MEEEYKKLLEKLKEEAEKLEKKIEEKFDELSDKEIAELWIRKKVYQEAVLELEGETFEKLWSLLPKSKKIATAVFKYYDELEEEEKKLKEELKKKIEELKKKL
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.4806
0.3571
0.0997
0.6269
0.7905
0.5284
0.403316
0.118519
54.987159
10.91209
0.513095
0.118519
62.156363
10.997561
0.563458
0.118519
0.118519
ok
null
litscrape_000477
477
p53_design_79
RFDiffusion
Mdm2
0
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
MEEIEKTKKWWEENEDKLTFEEIWSLQPKSKEEFEEIAKETENLSEEDQNYYTLAKCMKRRKKEEEEEKKK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.797
0.5384
0.2572
0.3293
0.5233
0.2603
0.483498
0.149278
57.131596
12.077908
0.456284
0.149278
76.660942
2.993845
0.792292
0.149278
0.149278
ok
null
litscrape_000478
478
p53_design_26
RFDiffusion
Mdm2
1
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
MEELEKKIKEFKEWVEKELKDDKEKREMFLLKFELELKEIEVELNGETFEDLWSLQPQSDKEATLLEKFEKEKDDPENKKYVEKMKKFLKEYKKLMEELKK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.4972
0.3618
0.09
0.65
0.8085
0.5334
0.358216
0.087542
65.536853
7.940217
0.603072
0.087542
56.275815
14.238861
0.421106
0.087542
0.087542
ok
null
litscrape_000479
479
p53_design_52
RFDiffusion
Mdm2
0
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
MELERELAFAWELLVRLKEKAAEDKGPLTFEDLWSLQPHNDKLATVMLKIYEDEELWKEVKERSEKEAEEIYEKAKKEGTVEEKIAELEEKVKELEEKV
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.4587
0.3507
0.1102
0.6301
0.7618
0.4877
0.360267
0.190779
63.253053
9.926423
0.533725
0.190779
60.463323
13.842389
0.39893
0.190779
0.190779
ok
null
litscrape_000480
480
p53_design_82
RFDiffusion
Mdm2
1
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
MKEAEELVERMKRAVEEGASDEEIVEILAEILKQSEEVRELAFELMAEDGKVAVVASRHLDEACEKVGRKPTFKEIFSLLPQSDEAAKEAFEYEKELE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.8395
0.601
0.2505
0.2949
0.5353
0.2515
0.569386
0.19147
64.155395
9.50437
0.55249
0.19147
83.273241
2.602546
0.854553
0.19147
0.19147
ok
null
litscrape_000481
481
p53_design_68
RFDiffusion
Mdm2
0
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
MKERAKEVLLTKAEIAAMKIVKASEEEGEKIRKEFKERMEEVVKKGFEKVEELEEELDKMTFEELFSLLPESDEEYKKYEEIADELKKYAEEAFEKMVENE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.4355
0.3508
0.0998
0.707
0.8282
0.5293
0.315819
0.07549
54.695025
11.01669
0.53169
0.07549
51.038826
17.831754
0.324697
0.07549
0.07549
ok
null
litscrape_000482
482
p53_design_71
RFDiffusion
Mdm2
1
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
MLSKETYEKLKKIVKELIKALLENKDKSFEEQFEIASKYQEKINELKEVTVDDWQKAFDEAVKEFSDKPFDFRTLWLLQPWVKLPE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7015
0.4938
0.1713
0.4117
0.6223
0.3326
0.507054
0.158935
60.327918
10.79261
0.514404
0.158935
76.220979
4.430613
0.779761
0.158935
0.158935
ok
null
litscrape_000483
483
p53_design_16
RFDiffusion
Mdm2
1
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
MMSEEEREEVEKIVKELLEKFSPEDVLKALKKRLKWLELEEHPEQETFEQLWSLQPQSKEEYEVEVAIDEALKGKSKEQKRQYLEYMVKLVEEKLK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.8045
0.5347
0.1643
0.3867
0.6753
0.3604
0.523105
0.13431
59.699458
11.236447
0.500194
0.13431
80.741802
3.552579
0.821181
0.13431
0.13431
ok
null
litscrape_000484
484
p53_design_85
RFDiffusion
Mdm2
0
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
MSEEEKEVKELARELEFKRKAALYYLEEVGEETFEQVFSMQPTDIKAAEAIFKLWDSMSEEEKEEFEKKAKEEAQKDLEKAKAEGVSNDEVVKKYLEEMEKLEKKLVEAVDKV
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.8588
0.6159
0.2203
0.3154
0.6099
0.2669
0.567815
0.156213
62.673662
9.815735
0.526388
0.156213
80.797099
3.794197
0.838393
0.156213
0.156213
ok
null
litscrape_000485
485
p53_design_72
RFDiffusion
Mdm2
0
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
MSVDEFVENGKKYAKKLVEKLKELGIEVPECKTIQATGMVAVMLLEKNKEAWEKLEDELTFEELWTLQPFSDEDAEEAEKAFDAA
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7341
0.4891
0.1514
0.3861
0.632
0.3494
0.601441
0.347975
64.995446
9.323417
0.556358
0.347975
81.463487
2.782055
0.821331
0.347975
0.347975
ok
null
litscrape_000486
486
p53_design_39
RFDiffusion
Mdm2
0
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
MTEEEKKELLKKKLIEELGISEEHAEKLLEFDRDVLISACEKMLKSLRLTENDTFEEIWSLLPESREEAEVEEFLYEIMEELGISEEERAEFLEKLLKLLKEF
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.8348
0.5818
0.2058
0.3328
0.6151
0.2806
0.560481
0.162858
59.348814
10.189139
0.510658
0.162858
81.264056
3.158511
0.831005
0.162858
0.162858
ok
null
litscrape_000487
487
p53_design_73
RFDiffusion
Mdm2
1
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
MTEEERRRRERELELGMRGYQAIRDGEIAKLELEKEEKGEKLTFEDIWKLLPQSDEEVRLAAKAYEEDPELYDRALEKAKYIEENEDTLSEEEKRKIKEELAKAAEELQARVERIRAA
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.8265
0.5948
0.1848
0.3299
0.6554
0.277
0.57198
0.156167
53.544687
11.912499
0.462541
0.156167
79.863474
3.265294
0.823107
0.156167
0.156167
ok
null
litscrape_000488
488
p53_design_96
RFDiffusion
Mdm2
0
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
MTEKEALAEVVKEVREEVEKLTDVEEKAILILATTEFLSEKPSATFEQLFSLQPEDDETATFLSSLTEEELEELKPKIEKKKEEIEKKYKELME
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.8194
0.5663
0.1798
0.3425
0.6266
0.28
0.559563
0.159335
55.325152
12.24175
0.450772
0.159335
81.631413
2.366008
0.868684
0.159335
0.159335
ok
null
litscrape_000489
489
p53_design_58
RFDiffusion
Mdm2
1
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
MTEKEKKYHLASLRSLREAMEFEAEKFGDEEAKEAAEFMKKVAEEIEKSSVEECEEILEKVTFEQLWRCLPRSDEAAKVADEVYDKLMKEVEE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7962
0.5582
0.1906
0.3376
0.6151
0.2566
0.511704
0.156336
55.267612
11.78242
0.470478
0.156336
76.587256
3.901945
0.7772
0.156336
0.156336
ok
null
litscrape_000490
490
p53_design_4
RFDiffusion
Mdm2
0
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
MTKEEFLEKLEEYLLSIEDEGKRLLLEREILLKMLEKQGATFEQLWSLQPQSKEEYEKMKSVEEEEEEIKKEAEEIVKEMVEKYNITFEEMKEMIEKVREKR
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.4736
0.3574
0.0965
0.6542
0.8027
0.5559
0.384953
0.12029
63.794985
7.567033
0.641353
0.12029
51.83824
15.921368
0.363488
0.12029
0.12029
ok
null
litscrape_000491
491
p53_design_5
RFDiffusion
Mdm2
0
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
MTREERKAFYEKLLAEVEKTESPETVEEFRKVVERIEKEEELEANPNQTFEELWSLQPQSDEEARAEERFERLRAEAEARAAA
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.5241
0.3744
0.098
0.6359
0.7821
0.47
0.344651
0.096468
61.415543
10.369832
0.534977
0.096468
63.897794
11.211754
0.511612
0.096468
0.096468
ok
null
litscrape_000492
492
p53_design_62
RFDiffusion
Mdm2
0
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
RAKAKLAVLEAVERLNIKVSFEEIWSLQPESPEEYEEMEKSKPEVEANIDEWVAFVKEKLEKGYSLVEIVEVLAKEL
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.4691
0.3735
0.1141
0.5626
0.7107
0.4199
0.325756
0.097479
54.104913
12.076441
0.475727
0.097479
52.087405
11.687833
0.475386
0.097479
0.097479
ok
null
litscrape_000493
493
p53_design_46
RFDiffusion
Mdm2
1
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
RDRAEELLAFMEEFAKEVKEKLEENKDDPEKQVEIALEVQKKAEEDDDWLRAGAILMGATLAYESLPNATFEQLFNLIPTSPKQYEGVAFMEEVREE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.5931
0.4455
0.1773
0.4815
0.6598
0.3306
0.4475
0.170142
59.771495
10.320369
0.524503
0.170142
64.197189
10.092361
0.627883
0.170142
0.170142
ok
null
litscrape_000494
494
p53_design_6
RFDiffusion
Mdm2
0
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
REEREKVREEVLRKKEKELELEAKGSETFEELWSLQPESKEEYELEARVEERARPRVEALRAECEAEGLSAEELRERLAELYREALEEEAEEEEREEEERRRLE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6011
0.3957
0.2064
0.5401
0.6571
0.3632
0.392069
0.140821
62.47073
9.753176
0.554332
0.140821
65.035798
13.40064
0.55273
0.140821
0.140821
ok
null
litscrape_000495
495
p53_design_32
RFDiffusion
Mdm2
0
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
SEEEEEEREFREELERLRELCEELGLSEEEIEWLEEKFRKEREIEKNGSTFEELWSLLPHSREQAEVEERLREAREEEERRRAEEA
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.7767
0.5273
0.1834
0.3687
0.6385
0.2783
0.463691
0.15528
61.720355
10.933122
0.51636
0.15528
77.169293
5.967449
0.702329
0.15528
0.15528
ok
null
litscrape_000496
496
p53_design_29
RFDiffusion
Mdm2
1
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
SEEEEKKKVKEELEEKAKKLFEAIVNGASREELVKLLKEVKELEEKNEDLWTFEELWSLQPENDKEVEDLDLLERYMRLRGFSEEEIEFMTRLYLFMKKKNPELVEKLLEVARREVAAAE
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.8349
0.5979
0.1925
0.338
0.6629
0.2914
0.569118
0.141008
63.487647
9.726938
0.53896
0.141008
81.467845
3.344053
0.824378
0.141008
0.141008
ok
null
litscrape_000497
497
p53_design_75
RFDiffusion
Mdm2
0
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
SEEELVKTVEEYREKALAKCETDREKAAALEAMSKKTEEIAKKYGVDVSFKVAFVLIPDDPAIATAMERDTDLPKLSYEELLAQLNPEVQEVLKEFEKKIEEILG
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.4384
0.3569
0.09
0.6352
0.7755
0.5318
0.388324
0.168149
69.080905
7.1882
0.635028
0.168149
57.89018
12.158656
0.43722
0.168149
0.168149
ok
null
litscrape_000498
498
p53_design_15
RFDiffusion
Mdm2
0
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
SEEKEKKIKELKKELEEEMEARGLSEEDKEAAKLYFELKLKEAELELNGATFEQLWSLQPKSREEAEKIERFEETHPELAKEIEEKVKELLEKEK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.795
0.5376
0.1567
0.3914
0.6879
0.327
0.528245
0.128074
64.013808
10.53885
0.525808
0.128074
80.381345
3.53545
0.822737
0.128074
0.128074
ok
null
litscrape_000499
499
p53_design_27
RFDiffusion
Mdm2
1
null
ETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVV
SEEKLEKIKKYLKKEEEGTTTFEDIWSLQPESDEEYKKREKFEEEHKEEIKKLAKEKGIDENTAFLELYVKYEEEKKK
ColabDesign AF2-Multimer (model_1_multimer_v3, de novo from sequence, 3 recycles, no MSA)
AF3Score (init_guess on the AF2-predicted complex, no MSA)
0.6431
0.3952
0.104
0.549
0.7345
0.4679
0.364513
0.11273
62.56204
10.02176
0.53002
0.11273
67.616419
8.756765
0.552441
0.11273
0.11273
ok
null