variant_id
large_stringlengths
4
14
source
large_stringclasses
2 values
drug_classes
listlengths
1
12
esm2_embedding
listlengths
640
640
esm2_model
large_stringclasses
1 value
blaGES-5
SmartSepsis-Oph panel
[ "carbapenem", "cephalosporin" ]
[ -0.03224535658955574, -0.13928495347499847, 0.029759762808680534, 0.06084263324737549, 0.18627260625362396, -0.019533980637788773, 0.003136914689093828, -0.008889109827578068, -0.058639924973249435, 0.09377975016832352, 0.11776002496480942, 0.060949672013521194, -0.07765397429466248, -0.04...
esm2_t30_150M_UR50D
blaIMP
SmartSepsis-Oph panel
[ "carbapenem", "cephalosporin", "penam" ]
[ 0.005561129190027714, -0.1345970183610916, 0.04250164330005646, 0.046723634004592896, 0.1934550255537033, 0.022739848122000694, -0.010182681493461132, -0.03065039962530136, -0.05693354085087776, 0.1006322056055069, 0.0350155346095562, 0.04779284819960594, -0.09631066769361496, 0.0102913966...
esm2_t30_150M_UR50D
blaIMP-1
SmartSepsis-Oph panel
[ "carbapenem", "cephalosporin", "penam" ]
[ 0.03890654444694519, -0.1042388528585434, -0.034965891391038895, 0.03568628057837486, 0.0676729828119278, 0.10202759504318237, -0.04480566084384918, 0.05473964661359787, -0.07012143731117249, 0.26987048983573914, -0.03842301666736603, 0.056140750646591187, -0.08075453341007233, -0.02870171...
esm2_t30_150M_UR50D
blaIMP-6
SmartSepsis-Oph panel
[ "carbapenem", "cephalosporin", "penam" ]
[ 0.0360419787466526, -0.10451343655586243, -0.0347047820687294, 0.03649105504155159, 0.06817901879549026, 0.10172973573207855, -0.0462399423122406, 0.05247629061341286, -0.07113441824913025, 0.2699384093284607, -0.037662677466869354, 0.056068696081638336, -0.08155101537704468, -0.0264428798...
esm2_t30_150M_UR50D
blaKPC
SmartSepsis-Oph panel
[ "carbapenem", "cephalosporin", "penam" ]
[ 0.020913440734148026, -0.18021883070468903, 0.06840880215167999, 0.07591838389635086, 0.16221264004707336, 0.00008752321446081623, 0.07276017218828201, -0.04750187322497368, -0.11367388814687729, 0.09344219416379929, 0.046162985265254974, 0.023904988542199135, -0.09737300872802734, 0.06222...
esm2_t30_150M_UR50D
blaKPC-11
SmartSepsis-Oph panel
[ "carbapenem", "cephalosporin", "penam" ]
[ 0.02393261529505253, -0.18410053849220276, 0.07026999443769455, 0.08072726428508759, 0.16736648976802826, 0.006516770925372839, 0.07809805870056152, -0.049079880118370056, -0.11328095197677612, 0.08831222355365753, 0.04599280282855034, 0.020066140219569206, -0.10222161561250687, 0.06028295...
esm2_t30_150M_UR50D
blaKPC-2
SmartSepsis-Oph panel
[ "carbapenem", "cephalosporin", "penam" ]
[ 0.02175595425069332, -0.18796426057815552, 0.06719331443309784, 0.08397038280963898, 0.17014572024345398, 0.005715285427868366, 0.07730424404144287, -0.047620389610528946, -0.11393812298774719, 0.09338822960853577, 0.04780716821551323, 0.0220537930727005, -0.10204952955245972, 0.0588919036...
esm2_t30_150M_UR50D
blaKPC-3
SmartSepsis-Oph panel
[ "carbapenem", "cephalosporin", "penam" ]
[ 0.020600520074367523, -0.18205620348453522, 0.06393587589263916, 0.08204381167888641, 0.16134583950042725, 0.0019310049246996641, 0.07488981634378433, -0.047933902591466904, -0.11597616970539093, 0.09307170659303665, 0.051004063338041306, 0.025906002148985863, -0.09836671501398087, 0.05770...
esm2_t30_150M_UR50D
blaKPC-30
SmartSepsis-Oph panel
[ "carbapenem", "cephalosporin", "penam" ]
[ 0.02608310803771019, -0.20463676750659943, 0.047445062547922134, 0.08962587267160416, 0.17777803540229797, 0.01830889657139778, 0.08154492825269699, -0.03274926170706749, -0.11205209791660309, 0.08744878321886063, 0.056702930480241776, 0.03524835780262947, -0.11348577588796616, 0.048275087...
esm2_t30_150M_UR50D
blaKPC-31
SmartSepsis-Oph panel
[ "carbapenem", "cephalosporin", "penam" ]
[ 0.022426409646868706, -0.1872832328081131, 0.06858488917350769, 0.08282103389501572, 0.1569690704345703, -0.002203205833211541, 0.07450621575117111, -0.04882850870490074, -0.11581720411777496, 0.0948365181684494, 0.046732787042856216, 0.024230247363448143, -0.10104694217443466, 0.058270953...
esm2_t30_150M_UR50D
blaKPC-4
SmartSepsis-Oph panel
[ "carbapenem", "cephalosporin", "penam" ]
[ 0.021877234801650047, -0.1896028220653534, 0.06762354075908661, 0.08108199387788773, 0.17472784221172333, 0.0035522349644452333, 0.0743851587176323, -0.044648393988609314, -0.11038906127214432, 0.0923408642411232, 0.04629305750131607, 0.020060203969478607, -0.10474421828985214, 0.062107741...
esm2_t30_150M_UR50D
blaKPC-5
SmartSepsis-Oph panel
[ "carbapenem", "cephalosporin", "penam" ]
[ 0.010504502803087234, -0.1791437417268753, 0.06404344737529755, 0.06036157160997391, 0.1816038340330124, -0.0006160410703159869, 0.0684196949005127, -0.06987790763378143, -0.10712750256061554, 0.09340302646160126, 0.039851851761341095, 0.031830109655857086, -0.0897805318236351, 0.059338111...
esm2_t30_150M_UR50D
blaNDM
SmartSepsis-Oph panel
[ "carbapenem", "cephalosporin", "penam" ]
[ -0.06989528238773346, -0.15672174096107483, -0.032164063304662704, 0.05376635491847992, 0.13251517713069916, 0.1280326545238495, -0.007517943158745766, 0.07865608483552933, -0.14767184853553772, 0.23139727115631104, -0.03228294104337692, 0.05068787932395935, -0.06865601241588593, -0.116981...
esm2_t30_150M_UR50D
blaNDM-1
SmartSepsis-Oph panel
[ "carbapenem", "cephalosporin", "penam" ]
[ 0.08748538792133331, -0.26642972230911255, -0.06757684051990509, 0.034038424491882324, 0.1752883791923523, 0.05630135536193848, 0.0195521991699934, 0.054796408861875534, -0.02318887785077095, 0.1430625468492508, 0.03213178738951683, 0.01205284520983696, -0.04002281650900841, -0.06845004111...
esm2_t30_150M_UR50D
blaNDM-2
SmartSepsis-Oph panel
[ "carbapenem", "cephalosporin", "penam" ]
[ 0.09481354802846909, -0.2732633650302887, -0.06643056869506836, 0.035795800387859344, 0.18056833744049072, 0.05787196010351181, 0.02468748949468136, 0.058788497000932693, -0.021355828270316124, 0.14008857309818268, 0.025635121390223503, 0.011930004693567753, -0.038643259555101395, -0.07263...
esm2_t30_150M_UR50D
blaNDM-5
SmartSepsis-Oph panel
[ "carbapenem", "cephalosporin", "penam" ]
[ 0.08650639653205872, -0.26579520106315613, -0.06906342506408691, 0.03299561142921448, 0.17458873987197876, 0.05003570392727852, 0.019179798662662506, 0.055145733058452606, -0.021546343341469765, 0.13752460479736328, 0.029921475797891617, 0.01444152556359768, -0.03830735385417938, -0.062234...
esm2_t30_150M_UR50D
blaNDM-7
SmartSepsis-Oph panel
[ "carbapenem", "cephalosporin", "penam" ]
[ 0.08263752609491348, -0.26118338108062744, -0.0663653090596199, 0.03745762258768082, 0.16883616149425507, 0.05230594426393509, 0.016337323933839798, 0.052807554602622986, -0.02571468986570835, 0.1413642168045044, 0.03305385634303093, 0.012396633625030518, -0.042401544749736786, -0.06386578...
esm2_t30_150M_UR50D
blaOXA
SmartSepsis-Oph panel
[ "carbapenem", "cephalosporin", "penam" ]
[ 0.02831198088824749, -0.14648699760437012, -0.0021671801805496216, 0.02545720711350441, 0.1137317419052124, 0.02422136440873146, 0.019428325816988945, 0.0008695460273884237, -0.06385918706655502, 0.08163914084434509, 0.02422841638326645, -0.02402755245566368, -0.03357729688286781, -0.05571...
esm2_t30_150M_UR50D
blaOXA-181
SmartSepsis-Oph panel
[ "carbapenem", "cephalosporin", "penam" ]
[ 0.029705610126256943, -0.1566133201122284, -0.0013845621142536402, 0.023087315261363983, 0.11734279245138168, 0.019393252208828926, 0.02643498033285141, -0.0010702466825023293, -0.06471749395132065, 0.0750555694103241, 0.02928481251001358, -0.025106867775321007, -0.03301689773797989, -0.05...
esm2_t30_150M_UR50D
blaOXA-232
SmartSepsis-Oph panel
[ "carbapenem", "cephalosporin", "penam" ]
[ 0.02878021076321602, -0.1556386500597, -0.004041739739477634, 0.025004440918564796, 0.11667739599943161, 0.022635912522673607, 0.025090275332331657, -0.0018569313688203692, -0.0653068944811821, 0.07381565123796463, 0.02868988737463951, -0.024255529046058655, -0.03393685817718506, -0.059431...
esm2_t30_150M_UR50D
blaOXA-48
SmartSepsis-Oph panel
[ "carbapenem", "cephalosporin", "penam" ]
[ 0.02831198088824749, -0.14648699760437012, -0.0021671801805496216, 0.02545720711350441, 0.1137317419052124, 0.02422136440873146, 0.019428325816988945, 0.0008695460273884237, -0.06385918706655502, 0.08163914084434509, 0.02422841638326645, -0.02402755245566368, -0.03357729688286781, -0.05571...
esm2_t30_150M_UR50D
blaVIM
SmartSepsis-Oph panel
[ "carbapenem", "cephalosporin", "penam" ]
[ -0.03255772963166237, -0.14245769381523132, 0.0274721197783947, 0.06384947896003723, 0.19124864041805267, -0.017216121777892113, 0.006830792874097824, -0.008947196416556835, -0.057299450039863586, 0.09148962795734406, 0.11879444122314453, 0.062284789979457855, -0.07663634419441223, -0.0398...
esm2_t30_150M_UR50D
blaVIM-1
SmartSepsis-Oph panel
[ "carbapenem", "cephalosporin", "penam" ]
[ 0.01000926736742258, -0.0787665992975235, -0.04326595738530159, 0.041467562317848206, 0.05808518826961517, 0.040976982563734055, -0.04920011758804321, 0.03032563626766205, -0.006523554213345051, 0.2281537801027298, -0.028792323544621468, 0.09322692453861237, 0.01172697264701128, -0.0339231...
esm2_t30_150M_UR50D
blaVIM-2
SmartSepsis-Oph panel
[ "carbapenem", "cephalosporin", "penam" ]
[ 0.03668884560465813, -0.07711116969585419, -0.03880409151315689, 0.022740766406059265, 0.06498700380325317, 0.019999580457806587, -0.05148138105869293, 0.001380033208988607, 0.015876404941082, 0.19715853035449982, -0.041073862463235855, 0.0934339389204979, 0.03268212080001831, 0.0116960443...
esm2_t30_150M_UR50D
blaVIM-4
SmartSepsis-Oph panel
[ "carbapenem", "cephalosporin", "penam" ]
[ 0.05794781818985939, -0.11013492941856384, -0.05074601247906685, 0.07496853917837143, 0.05618634819984436, 0.0518353097140789, -0.0387185737490654, 0.07502947002649307, 0.0006189122213982046, 0.22418680787086487, -0.025042204186320305, 0.0802786648273468, -0.0024695731699466705, -0.0273656...
esm2_t30_150M_UR50D
mcr-1
SmartSepsis-Oph panel
[ "polymyxin", "peptide" ]
[ 0.023512059822678566, -0.175123929977417, -0.07619231939315796, 0.06631999462842941, 0.19626663625240326, 0.09830786287784576, 0.0048955101519823074, 0.07746054977178574, -0.0747920349240303, 0.046213336288928986, 0.08928598463535309, 0.0295913964509964, -0.06939612329006195, 0.05580366402...
esm2_t30_150M_UR50D
mcr-1.1
SmartSepsis-Oph panel
[ "polymyxin", "peptide" ]
[ 0.023512059822678566, -0.175123929977417, -0.07619231939315796, 0.06631999462842941, 0.19626663625240326, 0.09830786287784576, 0.0048955101519823074, 0.07746054977178574, -0.0747920349240303, 0.046213336288928986, 0.08928598463535309, 0.0295913964509964, -0.06939612329006195, 0.05580366402...
esm2_t30_150M_UR50D
mcr-5
SmartSepsis-Oph panel
[ "polymyxin", "peptide" ]
[ 0.019344888627529144, -0.19382494688034058, -0.08848904073238373, 0.03112548217177391, 0.22435788810253143, 0.06755109876394272, 0.03612842038273811, 0.08274487406015396, -0.08561673015356064, 0.04458869993686676, 0.13188552856445312, 0.028669441118836403, -0.04697972163558006, 0.134499475...
esm2_t30_150M_UR50D
mecA1
SmartSepsis-Oph panel
[ "penam", "cephalosporin", "methicillin" ]
[ -0.11064617335796356, -0.16902859508991241, -0.057973090559244156, -0.10596249252557755, 0.126931831240654, -0.007154973689466715, -0.020594757050275803, -0.026119854301214218, -0.04668690264225006, 0.09880652278661728, -0.11643065512180328, -0.07857204973697662, -0.028434058651328087, -0....
esm2_t30_150M_UR50D
mecA2
SmartSepsis-Oph panel
[ "penam", "cephalosporin", "methicillin" ]
[ -0.1202438473701477, -0.1667110025882721, -0.0702066421508789, -0.08234859257936478, 0.1392873078584671, -0.01157248392701149, -0.013685512356460094, 0.001348350546322763, -0.03383657708764076, 0.09275894612073898, -0.10835236310958862, -0.07466129958629608, -0.0501009039580822, -0.1191719...
esm2_t30_150M_UR50D
qnrS
SmartSepsis-Oph panel
[ "fluoroquinolone" ]
[ -0.130882129073143, -0.09681998193264008, -0.09856819361448288, -0.11509893089532852, 0.0021940572187304497, -0.004293588921427727, -0.024843702092766762, -0.05325591564178467, -0.048963312059640884, 0.16225460171699524, 0.07213784754276276, 0.0415680818259716, 0.10745272785425186, 0.19597...
esm2_t30_150M_UR50D
qnrS1
SmartSepsis-Oph panel
[ "fluoroquinolone" ]
[ -0.20866334438323975, -0.08651845902204514, -0.1285770684480667, 0.045195572078228, -0.07847034931182861, -0.001960321795195341, 0.02928491309285164, -0.17427045106887817, -0.07283288240432739, 0.028195993974804878, 0.07233760505914688, -0.06425565481185913, 0.03798770159482956, -0.0582043...
esm2_t30_150M_UR50D
qnrS2
SmartSepsis-Oph panel
[ "fluoroquinolone" ]
[ -0.20697686076164246, -0.07774749398231506, -0.12983761727809906, 0.028263071551918983, -0.06824326515197754, -0.011176328174769878, 0.02293672412633896, -0.20004841685295105, -0.0648704245686531, 0.024007724598050117, 0.0660271942615509, -0.06194604933261871, 0.03835129365324974, -0.03346...
esm2_t30_150M_UR50D
vanA
SmartSepsis-Oph panel
[ "glycopeptide" ]
[ -0.11868048459291458, -0.012007053941488266, 0.0600951723754406, -0.06438722461462021, 0.03751211613416672, -0.11594567447900772, 0.030973287299275398, -0.07061132788658142, -0.10895270109176636, 0.13058415055274963, 0.09760675579309464, 0.006846154108643532, -0.0840340331196785, 0.1626932...
esm2_t30_150M_UR50D