Datasets:
electricsheepafrica
/
ssa-breast-rna-expression

Dataset card Data Studio Files
xet
 Community
sample_id
stringlengths
16
16
population
stringclasses
7 values
region
stringclasses
5 values
is_SSA
bool
2 classes
is_reference_panel
bool
2 classes
sex
stringclasses
2 values
age
int64
18
90
tissue_type
stringclasses
2 values
tumor_subtype
stringclasses
5 values
is_tumor
bool
2 classes
library_size_millions
float64
23.9
89.8
detected_genes
int64
10.9k
21.4k
ACTB
float64
8.85
12.7
GAPDH
float64
8.87
12.5
RPLP0
float64
8.71
12.7
ESR1
float64
0
13.4
PGR
float64
0
14
GATA3
float64
0
13.2
FOXA1
float64
0
13.9
MKI67
float64
1.11
13.5
CCNB1
float64
0.18
12.5
BIRC5
float64
1.7
12.8
ERBB2
float64
1.46
15.7
KRT5
float64
0
14.9
KRT14
float64
0
14.6
KRT17
float64
0
14.7
EGFR
float64
0
14.7
IL20RA
float64
0.46
10.2
MARCO
float64
0.87
9.71
HLA_DPA1
float64
0.7
9.84
HLA_DPB1
float64
0.98
10
SORD
float64
1.4
8.76
FAM3A
float64
1.46
8.92
TAS2R43
float64
1.32
8.63
NUTM2F
float64
1.16
9.02
PWP2
float64
0.69
8.65
PM20D1
float64
0.75
7.94
BIRC7
float64
0.77
7.88
HOTAIR
float64
0.45
10.7
MALAT1
float64
0.59
11.4
NEAT1
float64
0.63
10.4
AC009283_1
float64
0.32
10.6
XIST
float64
6.84
13.5
MIR21
float64
0.2
8.14
MIR155
float64
0.26
8.48
MIR10B
float64
0.11
8.18
MIR200C
float64
0
6.62
MIR34A
float64
0.07
6.83
RNA_SAMPLE_00401
SSA_West
West
true
false
Female
48
Tumor
Luminal_A
true
64.5
16,207
9.717
10.151
10.557
9.951
10.559
9.855
11.017
6.862
5.092
3.953
5.793
3.665
3.945
3.373
3.644
6.821
5.514
5.85
7.097
3.87
7.039
3.197
4.757
4.997
2.83
4.152
5.949
6.74
6.708
6.174
10.895
5.516
4.74
5.095
2.491
2.02
RNA_SAMPLE_00402
SSA_West
West
true
false
Female
52
Tumor
Basal_like
true
63.42
15,201
10.606
9.551
10.735
1.273
2.568
1.778
1.872
9.052
8.389
8.433
5.234
10.35
9.832
11.041
8.376
4.801
8.189
5.866
5.285
5.477
6.19
6.077
4.827
5.039
4
4.58
6.545
5.583
5.99
6.235
11.186
5.358
8.147
5.285
1.653
3.281
RNA_SAMPLE_00403
SSA_West
West
true
false
Female
59
Tumor
Basal_like
true
68.38
17,570
10.798
10.51
10.557
0
2.859
1.621
3.146
8.467
8.947
10.249
7.136
11.509
8.255
8.968
11.341
5.602
6.374
6.507
6.556
4.55
6.421
5.028
6.031
5.314
6.029
5.604
8.632
8.153
6.366
5.966
9.092
5.713
5.519
5.466
2.337
3.289
RNA_SAMPLE_00404
SSA_West
West
true
false
Female
46
Tumor
Basal_like
true
56.94
16,420
10.782
10.661
9.987
1.212
2.533
1.952
0.057
9.699
8.951
7.938
5.131
10.698
7.85
11.005
11.684
7.191
7.454
5.52
7.334
5.745
4.748
5.92
5.893
6.886
5.377
3.678
6.841
6.83
6.751
6.195
11.404
5.002
6.833
4.36
2.695
3.612
RNA_SAMPLE_00405
SSA_West
West
true
false
Female
56
Normal_breast
Normal_like
false
41.58
14,118
10.767
9.636
11.052
6.979
7.021
5.826
5.072
4.638
5.287
5.13
4.62
5.401
3.205
5.225
3.62
4.838
5.318
5.305
4.655
5.508
5.619
6.488
5.064
4.297
3.19
5.931
2.12
2.81
4.026
3.385
10.655
3.585
2.572
4.203
3.117
3.41
RNA_SAMPLE_00406
SSA_West
West
true
false
Female
47
Tumor
Basal_like
true
72.58
15,433
10.873
11.484
9.4
1.662
2.948
1.73
2.059
9.188
9.313
8.194
6.566
10.806
9.125
9.941
8.804
6.514
6.791
6.512
6.85
5.62
6.186
5.385
6.132
4.343
3.042
4.378
7.184
6.223
7.138
6.81
8.361
7.359
4.493
4.744
3.92
3.016
RNA_SAMPLE_00407
SSA_West
West
true
false
Female
49
Tumor
Luminal_B
true
53.86
16,436
10.26
10.3
11.095
8.502
7.932
8.24
8.845
7.251
7.692
8.348
6.819
2.968
3.164
5.671
6.61
5.546
6.225
4.56
4.91
5.905
3.373
6.195
4.992
4.53
4.649
5.598
5.687
6.292
6.454
6.24
9.203
5.179
5.147
2.816
3.686
1.797
RNA_SAMPLE_00408
SSA_West
West
true
false
Female
59
Tumor
Luminal_A
true
61.03
18,821
10.578
10.177
10.98
11.402
8.891
7.64
11.183
7.354
6.885
4.7
7.398
4.74
6.088
3.162
3.691
3.347
6.468
6.444
5.904
6.569
4.796
5.304
5.339
6.489
5.309
4.586
6.265
6.551
5.664
7.362
9.638
5.344
4.523
5.757
2.92
4.653
RNA_SAMPLE_00409
SSA_West
West
true
false
Female
28
Tumor
Basal_like
true
58.99
18,124
10.385
10.546
10.679
2.351
1.253
1.429
2.089
9.399
8.964
8.821
4.473
11.1
11.511
11.653
10.68
5.697
5.978
6.454
6.281
4.739
3.986
5
5.251
5.778
3.931
4.074
6.612
8.067
6.334
4.951
9.452
6.946
6.647
6.252
3.561
3.57
RNA_SAMPLE_00410
SSA_West
West
true
false
Female
36
Tumor
Basal_like
true
58.09
18,040
11.153
11.122
10.401
1.675
1.358
2.997
2.303
9.392
9.576
7.588
6.682
9.851
9.96
9.497
10.596
6.233
4.909
4.511
6.097
6.233
6.146
6.401
5.322
5.182
4.2
5.024
8.113
6.04
6.234
6.531
9.788
5.035
5.399
4.867
3.58
4.179
RNA_SAMPLE_00411
SSA_West
West
true
false
Female
34
Tumor
Basal_like
true
57.73
18,995
10.646
10.351
11.043
1.076
2.624
2.254
1.596
8.491
8.127
10.032
5.577
10.873
10.487
10.245
10.892
6.812
6.439
6.111
5.213
4.957
5.225
5.514
3.935
6.058
4.589
3.776
5.584
5.813
5.176
6.161
9.856
6.235
5.879
6.498
3.09
2.271
RNA_SAMPLE_00412
SSA_West
West
true
false
Female
24
Normal_breast
Normal_like
false
63.93
14,617
9.727
10.61
9.705
5.415
5.025
6.024
6.454
4.675
4.604
5.758
4.233
3.577
4.15
2.551
3.139
4.901
6.131
3.591
4.651
6.218
5.874
4.752
4.936
5.413
4.232
5.04
5.131
2.618
2.405
3.456
8.518
4.05
1.803
2.761
3.303
2.73
RNA_SAMPLE_00413
SSA_West
West
true
false
Female
43
Tumor
HER2_enriched
true
69.45
16,307
11.654
11.403
10.698
3.905
5.66
8.286
6.428
8.333
7.889
9.387
12.17
5.341
6.363
6.299
5.525
4.413
5.018
5.383
5.963
6.849
7.347
5.853
5.995
4.14
3.919
3.802
5.863
7.08
6.049
4.605
10.674
6.463
5.731
5.365
2.28
2.33
RNA_SAMPLE_00414
SSA_West
West
true
false
Female
58
Normal_breast
Normal_like
false
58.57
14,101
11.506
10.975
10.67
8.215
6.776
5.07
4.476
4.576
4.897
4.242
3.876
3.783
4.566
5.729
3.592
5.403
2.949
5.659
3.791
5.274
4.961
4.782
3.665
4.319
2.941
3.265
5.182
3.647
3.327
4.65
10.261
4.626
3.809
1.409
4.644
4.549
RNA_SAMPLE_00415
SSA_West
West
true
false
Female
47
Tumor
Basal_like
true
73.28
16,761
11.248
10.523
10.845
0.945
0.626
2.87
2.004
7.719
9.815
6.264
4.99
8.507
11.939
9.98
10.595
6.604
7.109
6.995
7.101
5.261
6.268
4.91
5.138
4.117
5.809
3.406
7.911
7.037
6.699
6.867
9.148
6.784
5.211
6.31
2.565
1.855
RNA_SAMPLE_00416
SSA_West
West
true
false
Female
52
Tumor
Basal_like
true
75.87
16,275
10.931
9.186
10.665
2.604
2.143
1.902
1.789
9.871
7.706
8.763
7.235
8.721
10.372
9.176
10.861
6.333
5.356
6.324
6.366
4.952
5.125
4.917
3.448
6.334
5.375
2.725
7.708
6.901
5.398
6.291
9.436
6.239
4.766
7.198
3.927
2.02
RNA_SAMPLE_00417
SSA_West
West
true
false
Female
62
Tumor
Basal_like
true
73.11
17,875
10.625
11.038
11.162
1.242
2.835
1.567
2.814
8.864
7.993
9.63
5.421
10.685
10.991
12.263
9.977
5.452
7.946
6.303
5.755
5.826
5.191
5.259
7.816
4.611
3.006
5.403
6.121
6.819
7.138
4.75
10.912
5.051
7.019
4.863
4.253
4.397
RNA_SAMPLE_00418
SSA_West
West
true
false
Female
65
Tumor
Basal_like
true
56.08
16,771
10.543
11.46
10.79
2.533
1.856
2.472
2.537
8.403
10.772
8.796
6.83
8.986
11.321
11.778
10.819
7.376
5.593
6.773
4.779
5.634
4.786
5.438
6.741
7.064
3.146
5.421
7.899
6.825
7.858
6.085
9.589
5.092
6.071
5.422
2.427
2.466
RNA_SAMPLE_00419
SSA_West
West
true
false
Female
49
Tumor
Luminal_B
true
60.01
15,980
11.034
11.298
11.187
11.911
9.411
10.695
9.184
7.722
8.119
8.166
7.176
2.701
2.825
5.36
5.001
7.279
5.107
5.014
4.351
6.45
4.697
5.472
5.782
4.093
4.999
5.209
6.277
5.913
5.968
7.4
10.043
4.984
4.451
2.761
3.877
2.998
RNA_SAMPLE_00420
SSA_West
West
true
false
Female
65
Normal_breast
Normal_like
false
43
17,532
10.72
10.397
11.009
5.868
5.849
4.891
6.196
5.94
4.397
3.105
5.95
4.254
4.511
3.555
4.655
4.147
4.613
3.753
5.957
4.958
5.209
5.39
4.785
5.74
5.292
4.682
2.277
4.11
4.155
5.242
9.561
2.168
3.668
2.985
3.501
3.792
RNA_SAMPLE_00421
SSA_West
West
true
false
Female
51
Normal_breast
Normal_like
false
38.71
15,204
10.348
10.766
10.398
5.535
5.045
5.245
4.37
6.032
4.958
3.011
3.415
4.745
3.448
3.476
3.497
5.287
6.331
5.245
5.107
4.486
3.612
5.427
5.5
5.99
5.341
2.756
3.386
4.668
4.001
5.443
9.845
4.601
3.045
4.302
2.075
4.389
RNA_SAMPLE_00422
SSA_West
West
true
false
Female
41
Normal_breast
Normal_like
false
50.19
12,487
10.492
9.881
10.24
5.805
5.377
5.856
5.657
7.354
5.259
5.113
5.421
3.469
1.599
4.33
5.049
6.355
5.489
4.531
5.063
6.608
4.798
3.926
6.988
4.084
2.385
4.087
4.409
4.458
4.878
3.838
9.882
2.541
3.109
3.434
4.725
3.282
RNA_SAMPLE_00423
SSA_West
West
true
false
Female
43
Tumor
Luminal_A
true
50.03
18,061
10.435
10.207
9.775
11.407
10.276
10.545
10.437
6.713
6.477
6.43
5.823
1.382
6.195
3.546
2.975
4.699
6.55
5.645
4.637
5.227
5.78
5.152
6.234
7.412
3.92
4.044
5.17
5.847
4.04
7.099
8.933
4.355
5.067
6.102
2.317
2.851
RNA_SAMPLE_00424
SSA_West
West
true
false
Female
34
Tumor
HER2_enriched
true
62.35
16,194
10.64
9.905
10.436
7.23
6.816
5.556
4.987
8.288
7.036
8.303
11.39
4.464
4.831
5.644
3.754
6.958
7.125
8.2
6.296
6.826
6.379
5.671
4.405
6.306
4.516
5.909
7.24
7.556
5.922
6.745
8.461
5.944
6.474
6.614
2.716
1.549
RNA_SAMPLE_00425
SSA_West
West
true
false
Female
40
Normal_breast
Normal_like
false
45.7
14,906
10.704
9.485
10.448
4.463
6.947
3.165
6.513
4.84
2.953
6.677
6.35
5
3.612
2.694
3.578
5.346
4.258
3.942
5.293
5.176
5.833
6.371
5.771
3.963
3.788
4.148
4.809
4.858
3.942
3.51
10.807
3.302
3.225
2.436
5.68
4.199
RNA_SAMPLE_00426
SSA_West
West
true
false
Female
46
Tumor
Luminal_B
true
59.31
17,298
10.634
10.056
10.849
7.548
9.103
7.407
6.846
8.613
6.896
8.434
7.469
4.176
3.248
3.843
3.212
6.445
5.017
5.252
6.245
4.941
3.888
4.545
6.45
5.574
4.563
4.566
7.788
3.925
5.872
6.03
9.984
5.64
5.66
4.827
1.648
5.007
RNA_SAMPLE_00427
SSA_West
West
true
false
Female
59
Tumor
Basal_like
true
59.95
17,104
11.331
10.503
11.346
1.693
3.829
2.455
1.325
11.18
9.602
8.391
4.393
11.337
12.161
10.964
10.896
7.859
6.898
5.642
5.685
6
5.952
6.479
5.832
6.112
4.613
5.168
7.246
6.242
6.312
6.824
10.09
6.551
5.67
4.361
2.054
2.809
RNA_SAMPLE_00428
SSA_West
West
true
false
Female
69
Tumor
HER2_enriched
true
65.77
16,129
11.026
10.316
10.779
6.415
4.857
6.396
7.616
8.302
8.576
8.753
11.891
5.029
4.936
3.119
5.544
4.925
6.376
6.701
6.407
4.705
5.784
5.308
4.969
7.357
3.492
4.745
8.026
6.883
5.885
5.949
8.882
5.575
5.604
5.299
4.139
2.97
RNA_SAMPLE_00429
SSA_West
West
true
false
Female
35
Normal_breast
Normal_like
false
37.6
16,819
9.926
10.774
10.839
5.462
6.475
5.619
5.183
2.958
3.311
7.796
5.778
5.059
6.571
3.123
3.389
3.198
4.559
4.533
4.458
5.99
5.688
5.872
3.946
5.07
4.153
5.525
4.165
3.885
5.135
3.79
10.415
3.391
2.623
2.486
3.975
3.654
RNA_SAMPLE_00430
SSA_West
West
true
false
Female
54
Tumor
Luminal_B
true
48.01
17,865
10.985
10.329
10.28
9.489
10.752
10.021
10.201
7.696
8.415
7.868
6.574
4.235
2.959
3.106
3.466
5.162
5.471
3.434
4.568
6.914
5.492
6.005
5.875
5.403
3.505
3.805
7.958
5.467
7.722
5.585
9.745
5.061
4.859
4.249
2.989
1.822
RNA_SAMPLE_00431
SSA_West
West
true
false
Female
39
Tumor
Luminal_B
true
62.92
17,269
11.064
10.452
11.069
9.431
9.128
10.977
9.471
7.536
9.536
8.51
9.079
1.774
3.639
3.642
1.734
5.666
5.128
3.501
4.734
6.748
6.318
4.859
4.833
6.275
2.531
4.834
4.168
7.642
6.658
4.156
9.696
5.254
3.41
4.965
3.385
1.345
RNA_SAMPLE_00432
SSA_West
West
true
false
Female
55
Tumor
Basal_like
true
65.97
16,850
11.158
10.583
10.171
0.845
1.688
1.811
3.064
8.721
7.44
8.542
4.276
10.92
11.196
11.4
10.137
5.6
5.789
6.209
5.791
6.949
5.171
5.408
4.824
4.844
3.154
3.374
8.372
7.044
6.161
5.843
10.988
4.831
4.137
5.88
2.259
1.973
RNA_SAMPLE_00433
SSA_West
West
true
false
Female
49
Normal_breast
Normal_like
false
41.26
15,498
10.448
10.008
10.735
4.672
3.864
4.192
5.522
4.216
5.105
6.112
4.37
6.7
3.831
3.288
1.898
4.451
4.551
5.56
4.204
5.389
5.038
5.877
5.948
5.3
4.488
4.811
4.537
4.278
4.409
5.612
10.09
3.583
2.459
4.201
4.36
3.724
RNA_SAMPLE_00434
SSA_West
West
true
false
Female
30
Tumor
HER2_enriched
true
59.44
16,737
10.702
10.805
10.602
4.412
7.774
6.266
6.271
8.452
9.408
8.548
11.489
4.704
6.502
5.243
4.958
5.565
5.679
7.081
5.084
6.103
6.136
5.694
5.329
4.166
4.898
2.864
6.667
6.552
7.268
5.604
9.244
5.928
5.363
3.886
2.995
4.446
RNA_SAMPLE_00435
SSA_West
West
true
false
Female
60
Tumor
Luminal_A
true
64.39
15,577
10.935
11.191
9.837
9.713
11.3
8.476
9.72
6.285
6.084
7.876
8.022
3.137
2.279
5.028
4.43
5.483
6.155
6.148
4.625
4.965
5.505
3.76
5.192
4.787
4.454
3.286
6.429
6.223
5.898
6.469
10.474
4.81
5.028
4.457
2.448
4.264
RNA_SAMPLE_00436
SSA_West
West
true
false
Female
43
Tumor
Basal_like
true
58.38
16,985
10.661
10.886
10.428
1.552
2.937
0.513
2.187
8.179
6.991
8.919
4.646
8.9
13.615
11.15
11.18
6.247
5.106
6.135
5.945
3.768
7.112
5.42
4.75
5.611
3.059
3.456
8.036
5.98
6.482
6.604
9.861
5.069
7.315
4.907
2.285
3.393
RNA_SAMPLE_00437
SSA_West
West
true
false
Female
44
Tumor
Luminal_B
true
49.72
18,225
10.599
10.765
10.848
8.66
9.916
9.65
9.516
6.486
7.651
7.889
9.038
2.303
3.234
5.298
2.873
4.842
7.174
5.866
6.358
6.15
5.605
5.582
6.298
4.738
5.861
3.819
7.023
6.506
5.453
6.484
10.102
3.588
4.931
4.001
3.406
2.887
RNA_SAMPLE_00438
SSA_West
West
true
false
Female
38
Tumor
Luminal_B
true
67.02
16,163
10.052
10.162
11.71
12.029
11.001
7.46
7.623
6.935
8.774
10.108
8.205
4.228
2.891
3.657
4.106
6.383
5.001
5.901
5.775
5.59
5.144
5.609
5.414
4.796
5.096
5.717
6.17
5.954
6.759
6.185
10.912
5.085
5.469
6.387
4.014
2.875
RNA_SAMPLE_00439
SSA_West
West
true
false
Female
43
Normal_breast
Normal_like
false
58.65
13,718
10.4
10.917
11.265
4.749
5.473
5.503
5.408
3.784
5.501
3.724
6.138
5.12
2.734
1.977
3.461
4.28
4.59
4.892
3.87
6.493
4.423
5.842
4.199
5.055
4.205
3.922
3.746
3.507
3.593
3.325
10.266
4.465
3.287
3.477
4.866
3.639
RNA_SAMPLE_00440
SSA_West
West
true
false
Female
55
Tumor
Luminal_A
true
45.57
17,003
11.127
11.705
10.21
11.1
10.261
9.611
8.954
5.916
7.073
7.723
4.076
4.115
2.812
2.924
4
7.421
4.782
5.404
3.925
5.895
4.879
6.918
5.824
5.245
4.051
4.628
6.691
4.831
5.851
5.997
10.169
6.045
3.86
5.765
3.292
2.602
RNA_SAMPLE_00441
SSA_West
West
true
false
Female
48
Tumor
HER2_enriched
true
66.45
16,540
9.794
8.983
10.092
5.456
6.172
6.597
5.742
7.09
8.119
8.282
13.538
5.668
3.012
4.622
5.836
6.021
4.376
6.818
6.363
5.359
4.774
6.412
3.867
4.101
3.639
4.572
5.136
5.955
6.159
6.843
9.779
5.282
4.935
6.371
3.528
3.499
RNA_SAMPLE_00442
SSA_West
West
true
false
Female
54
Tumor
Basal_like
true
53.78
16,384
10.938
10.406
10.237
2.289
0.692
1.791
2.892
9.145
7.953
9.473
5.199
11.515
11.111
10.083
9.6
5.451
8.89
4.009
4.54
6.492
6.298
5.824
3.707
5.985
3.418
4.211
6.907
7.007
5.849
7.785
10.65
4.732
5.116
4.893
2.95
3.503
RNA_SAMPLE_00443
SSA_West
West
true
false
Female
54
Normal_breast
Normal_like
false
35.19
12,618
10.084
11.176
10.619
7.077
5.344
4.658
3.824
4.171
4.38
2.575
4.159
2.48
3.526
3.449
3.884
3.177
3.665
5.726
4.541
5.762
4.873
5.168
5.476
4.499
3.2
3.188
3.922
4.574
3.593
5.155
11.4
2.297
3.951
2.986
4.305
3.893
RNA_SAMPLE_00444
SSA_West
West
true
false
Female
65
Tumor
Basal_like
true
69.75
17,416
10.526
10.491
10.099
1.428
3.22
3.083
1.36
7.902
9.952
9.429
3.824
13.956
10.514
12.542
10.709
5.259
6.494
4.832
6.174
4.521
5.316
5.723
5.766
4.186
3.72
2.522
7.121
6.703
5.325
7.906
10.373
5.416
5.121
4.99
2.369
3.939
RNA_SAMPLE_00445
SSA_West
West
true
false
Female
46
Tumor
Luminal_A
true
62.2
15,741
11.348
10.655
10.24
11.975
8.905
9.175
10
6.822
5.747
4.289
6.832
2.245
3.069
2.528
2.2
5.234
4.868
4.66
6.466
4.605
5.273
5.466
3.978
4.494
4.264
4.231
5.212
5.974
6.268
6.587
10.533
5.967
5.086
3.889
2.763
1.985
RNA_SAMPLE_00446
SSA_West
West
true
false
Female
34
Tumor
Basal_like
true
66.76
18,647
10.697
11.281
11.247
2.304
2.527
2.949
0.604
9.248
9.554
7.566
7.712
11.811
11.821
10.991
9.362
5.032
6.201
6.997
6.842
7.039
5.22
5.176
5.507
4.459
5.652
4.075
6.753
7.314
5.747
6.777
9.994
6.28
5.507
3.214
2.252
1.8
RNA_SAMPLE_00447
SSA_West
West
true
false
Female
62
Tumor
Basal_like
true
75.42
18,697
9.625
10.195
10.008
2.216
1.044
1.735
0.623
9.43
7.321
11.503
7.304
13.478
11.228
12.368
11.571
5.296
5.928
6.724
7.452
5.494
5.999
5.201
5.129
4.176
4.698
3.857
5.215
5.907
6.785
7.168
9.852
6.355
6.692
5.271
3.779
2.466
RNA_SAMPLE_00448
SSA_West
West
true
false
Female
46
Tumor
Luminal_A
true
49.6
15,866
10.268
10.481
11.691
9.476
9.624
10.154
8.679
6.646
7.157
7.983
8.114
3.936
3.232
3.301
3.989
5.453
5.409
4.565
6.171
5.768
4.819
6.84
5.688
4.218
5.15
3.695
5.59
5.813
6.863
5.942
10.495
3.741
4.117
5.026
2.42
2.837
RNA_SAMPLE_00449
SSA_West
West
true
false
Female
62
Normal_breast
Normal_like
false
55.97
14,036
10.132
10.555
9.437
6.508
5.63
5.593
4.961
5.689
4.839
6.226
3.289
3.576
3.551
3.874
5.184
3.436
3.405
4.447
2.907
7.076
5.84
5.466
5.705
6.144
3.247
3.475
4.342
3.496
3.072
3.47
10.305
3.729
1.983
2.848
3.957
2.887
RNA_SAMPLE_00450
SSA_West
West
true
false
Female
54
Tumor
Luminal_A
true
63.59
16,871
10.231
10.459
10.968
10.978
10.34
11.906
11.115
7.051
5.797
7.631
6.031
4.396
0.567
2.907
1.823
5.214
3.961
5.529
5.967
4.915
5.212
5.698
5.458
6.713
3.683
4.784
6.26
4.411
6.087
5.913
9.606
6.419
6.028
4.39
3.508
3.595
RNA_SAMPLE_00451
SSA_West
West
true
false
Female
49
Tumor
Luminal_A
true
61.17
15,682
10.224
10.964
10.953
9.715
11.316
11.493
11.482
7.986
6.484
5.165
6.478
3.362
2.744
3.043
2.113
6.214
7.128
7.882
5.748
5.346
5.467
6.725
6.71
5.283
5.383
4.445
5.264
5.845
7.703
6.722
9.595
5.75
5.571
4.752
2.403
2.111
RNA_SAMPLE_00452
SSA_West
West
true
false
Female
54
Tumor
Basal_like
true
46.85
16,214
10.611
11.33
11.112
2.197
0.126
2.295
0.355
9.873
9.901
9.051
6.617
11.717
10.631
10.326
8.906
5.945
5.303
5.293
5.567
3.735
6.381
5.697
6.545
6.222
4.749
5.015
6.651
7.805
5.99
6.48
9.777
7.114
4.995
6.53
1.909
3.08
RNA_SAMPLE_00453
SSA_West
West
true
false
Female
71
Tumor
Luminal_A
true
58.55
15,774
10.368
10.952
10.532
9.035
10.898
9.979
10.331
7.593
8.046
4.214
6.693
1.488
6.771
3.681
4.668
4.873
5.145
6.599
6.015
7.01
4.749
5.304
5.962
6.099
4.677
3.109
5.057
6.342
4.457
5.114
10.03
4.379
5.183
4.928
2.369
2.388
RNA_SAMPLE_00454
SSA_West
West
true
false
Female
73
Tumor
Luminal_B
true
70.22
17,460
10.824
10.727
10.246
8.436
6.599
8.363
8.38
8.549
7.397
8.786
7.04
4.178
3.963
4.84
5.447
4.513
7.259
4.643
5.316
5.024
6.857
4.545
6.146
3.512
5.032
4.128
5.626
5.308
5.933
5.645
8.807
4.372
5.639
4.678
2.368
3.037
RNA_SAMPLE_00455
SSA_West
West
true
false
Female
51
Tumor
Basal_like
true
63.91
17,780
10.869
11.304
10.725
1.764
2.873
1.291
1.596
7.407
10.814
11.085
5.625
11.416
11.339
10.727
11.959
5.035
6.115
4.213
5.289
4.037
3.846
5.054
5.828
4.901
3.809
3.639
6.64
5.895
5.493
7.432
9.302
4.483
6.092
4.153
3.983
2.179
RNA_SAMPLE_00456
SSA_West
West
true
false
Female
52
Normal_breast
Normal_like
false
50.64
13,806
10.506
10.239
10.009
3.896
4.959
5.975
6.174
4.281
4.284
4.826
5.001
3.496
2.979
3.061
3.155
2.385
4.394
5.582
6.193
6.059
5.081
3.93
4.507
4.314
2.532
2.952
3.271
2.605
4.933
4.609
9.961
3.305
3.245
2.413
5.439
3.385
RNA_SAMPLE_00457
SSA_West
West
true
false
Female
62
Tumor
Basal_like
true
46.66
17,193
10.982
10.549
11.322
2.181
1.179
1.406
2.149
9.081
10.213
9.835
4.232
10.298
9.009
12.25
9.332
6.502
5.602
4.321
5.045
5.276
6.012
5.978
4.302
5.782
5.155
4.761
6.138
6.548
6.652
7.897
11.361
6.016
5.543
5.475
3.058
3.164
RNA_SAMPLE_00458
SSA_West
West
true
false
Female
41
Tumor
Basal_like
true
55.87
19,361
10.304
11.348
9.601
1.725
1.661
2.229
1.636
10.386
8.758
7.971
4.834
9.932
11.369
11.587
9.057
5.5
5.234
6.015
7.262
5.654
5.995
6.172
4.972
4.347
3.771
5.039
7.103
6.579
7.449
6.646
9.735
4.245
6.517
5.423
2.639
2.918
RNA_SAMPLE_00459
SSA_West
West
true
false
Female
54
Tumor
Basal_like
true
71.99
18,191
10.52
10.935
11.314
2.347
2.121
0
3.246
7.972
7.129
7.196
4.945
11.083
11.893
10.91
12.583
5.897
6.068
4.433
5.724
3.662
4.292
6.067
3.982
4.071
2.718
4.999
8.139
6.425
7.443
5.336
10.984
4.927
6.034
5.478
1.466
2.292
RNA_SAMPLE_00460
SSA_West
West
true
false
Female
50
Normal_breast
Normal_like
false
51.37
12,780
10.648
9.792
10.77
4.139
5.943
6.317
5.332
4.92
6.486
4.217
4.466
4.269
4.007
3.209
2.042
5.774
3.562
7.078
3.604
4.005
5.308
5.494
4.123
6.523
4.097
3.577
4.386
5.211
5.609
4.193
8.981
1.993
1.868
2.486
4.03
4.171
RNA_SAMPLE_00461
SSA_West
West
true
false
Female
53
Tumor
Luminal_A
true
69.01
14,511
10.695
10.93
9.296
10.454
12.73
10.773
10.308
6.226
6.733
8.037
6.453
4.932
4.057
5.452
4.807
5.69
5.625
5.187
6.477
4.969
5.602
5.326
4.293
5.698
2.927
3.897
6.667
6.169
6.153
5.135
10.839
4.291
5.565
6.039
1.776
2.675
RNA_SAMPLE_00462
SSA_West
West
true
false
Female
41
Tumor
Basal_like
true
56.01
17,327
10.228
10.117
10.673
1.439
1.854
2.893
0.383
8.886
8.409
9.024
5.213
9.084
10.972
13.826
10.379
5.574
5.571
7.235
5.423
6.67
4.027
5.673
6.097
6.186
4.923
4.539
7.654
5.509
5.856
6.097
11.187
5.873
6.046
5.357
3.653
1.758
RNA_SAMPLE_00463
SSA_West
West
true
false
Female
33
Normal_breast
Normal_like
false
46.73
14,739
10.263
10.339
10.773
5.738
6.694
3.414
6.988
4.35
6.316
4.582
5.37
2.208
2.041
4.197
0.303
3.585
5.567
4.386
3.918
6.371
6.687
5
6.146
6.365
3.785
3.339
4.089
2.545
4.568
3.671
10.045
3.034
2.322
2.971
2.912
3.614
RNA_SAMPLE_00464
SSA_West
West
true
false
Female
27
Tumor
Luminal_A
true
51.09
15,948
9.571
10.485
10.943
10.178
11.084
9.047
9.521
7.417
6.413
6.685
8.914
3.195
2.919
2.308
3.153
6.522
6.074
6.933
5.861
3.483
6.066
5.594
5.502
6.596
4.053
4.822
4.923
4.482
5.401
5.686
10.438
4.122
6.206
4.228
2.929
3.009
RNA_SAMPLE_00465
SSA_West
West
true
false
Female
38
Tumor
Luminal_A
true
62.39
17,540
11.831
10.399
10.856
9.916
10.983
10.449
10.22
5.006
6.047
5.523
6.353
2.509
2.878
3.007
3.028
5.206
4.572
5.537
4.598
4.961
5.455
3.177
7.742
5.972
4.588
3.83
6.094
4.79
6.49
4.316
8.985
4.432
6.208
4.119
3.267
1.35
RNA_SAMPLE_00466
SSA_West
West
true
false
Female
45
Tumor
Basal_like
true
60.2
19,082
10.95
9.663
10.722
1.536
3.226
1.9
0.56
8.864
8.304
6.84
5.626
10.505
10.958
11.721
10.163
4.799
5.463
6.281
7.515
5.504
5.381
5.287
5.493
7.219
4.224
4.063
6.538
5.824
4.939
4.76
9.419
6.445
6.434
4.607
2.873
3.105
RNA_SAMPLE_00467
SSA_West
West
true
false
Female
47
Tumor
Luminal_A
true
54.2
18,570
11.081
10.88
10.734
8.437
11.357
10.581
10.409
5.762
5.849
6.995
7.902
5.57
2.618
3.309
0.987
3.039
6.024
4.647
3.527
4.453
5.809
5.846
4.026
6.613
3.674
4.547
6.038
5.988
5.063
5.976
10.215
4.841
5.081
5.881
2.623
3.523
RNA_SAMPLE_00468
SSA_West
West
true
false
Female
71
Tumor
Luminal_A
true
58.32
18,709
9.997
11.352
10.434
12.112
10.435
10.85
9.839
7.181
7.18
6.358
7.564
0
2.727
3.526
4.102
6.472
5.247
5.11
6.372
6.536
6.166
5.362
7.794
5.571
4.495
5.77
7.528
6.708
5.098
6.113
10.414
6.562
7.36
4.521
3.682
2.348
RNA_SAMPLE_00469
SSA_West
West
true
false
Female
62
Normal_breast
Normal_like
false
49
13,959
11.335
10.619
10.647
5.549
5.876
5.91
4.815
3.312
3.673
3.389
5.195
2.52
4.676
3.789
1.297
4.39
2.677
3.656
4.31
4.149
6.696
5.674
4.705
6.284
2.923
3.501
4.854
2.884
4.685
4.293
10.47
4.438
3.364
3.101
2.802
4.168
RNA_SAMPLE_00470
SSA_West
West
true
false
Female
39
Normal_breast
Normal_like
false
46.16
14,852
10.263
10.746
10.005
5.712
4.458
3.701
5.158
5.464
4.223
5.137
4.637
2.257
4.169
2.718
3.95
3.34
4.937
5.424
5.152
5.803
5.581
5.269
5.761
4.664
4.269
3.82
5.851
4.273
2.715
4.253
9.239
3.583
3.597
2.513
3.17
4.106
RNA_SAMPLE_00471
SSA_West
West
true
false
Female
54
Tumor
Basal_like
true
52.77
15,993
10.447
11.012
9.958
1.246
4.399
3.954
3.21
9.044
9.752
8.615
3.095
9.816
9.931
10.534
11.08
7.951
6.332
5.296
6.104
6.08
5.399
4.777
5.972
4.471
3.509
4.674
5.715
6.147
6.516
6.458
9.226
5.763
4.766
6.821
2.679
3.486
RNA_SAMPLE_00472
SSA_West
West
true
false
Female
46
Tumor
Luminal_B
true
65.87
16,574
10.216
11.065
9.989
7.73
9.607
8.799
8.293
7.501
7.205
10.181
8.318
3.011
3.625
4.716
2.829
4.941
5.202
4.619
6.596
4.857
5.395
5.605
6.928
5.422
6.223
3.974
5.779
6.937
7.92
5.735
10.989
5.678
4.391
4.986
2.967
2.175
RNA_SAMPLE_00473
SSA_West
West
true
false
Female
47
Tumor
Luminal_A
true
61.31
17,096
10.887
10.735
10.366
12.446
10.217
11.3
10.438
8.007
5.724
6.411
6.352
2.814
3.821
3.205
1.787
5.197
5.114
6.381
4.053
5.038
4.825
6.17
5.009
6.441
4.258
4.741
7.106
4.798
5.753
6.421
10.158
3.962
5.557
5.038
3.103
2.823
RNA_SAMPLE_00474
SSA_West
West
true
false
Female
52
Tumor
Basal_like
true
34.55
17,654
10.994
10.489
9.958
1.465
2.995
1.592
2.023
8.666
9.315
7.683
5.598
11.816
9.4
10.17
11.764
7.047
6.752
6.689
6.673
5.293
6.492
5.078
4.605
4.254
3.745
3.734
5.789
5.324
6.874
5.554
10.439
6.077
7.558
5.136
2.872
2.403
RNA_SAMPLE_00475
SSA_West
West
true
false
Female
57
Normal_breast
Normal_like
false
40.63
14,495
10.112
9.908
10.618
4.428
6.066
6.356
4.635
6.399
5.401
4.927
3.221
1.444
5.387
5.084
5.42
6.657
6.175
5.038
5.36
4.384
5.215
5.671
5.688
4.887
1.973
2.438
4.476
3.495
4.665
2.783
11.089
2.25
4.181
1.759
4.483
3.255
RNA_SAMPLE_00476
SSA_West
West
true
false
Female
46
Normal_breast
Normal_like
false
49.93
16,291
10.951
10.088
10.194
3.927
3.708
4.666
4.645
3.494
4.795
4.968
4.987
2.541
2.805
3.12
4.48
4.123
3.121
4.479
4.364
3.546
4.641
4.204
4.93
5.378
3.317
4.26
3.694
3.735
3.691
3.806
8.899
1.537
3.894
3.169
3.566
4.851
RNA_SAMPLE_00477
SSA_West
West
true
false
Female
62
Tumor
Basal_like
true
82.92
15,199
10.681
11.034
9.885
0.473
2.953
1.946
1.306
7.359
9.326
7.598
4.781
9.353
10.093
9.179
9.36
7.245
6.468
6.315
6.736
4.547
5.827
5.884
4.579
6.037
4.512
4.536
8.166
6.622
5.577
6.63
10.011
4.613
3.881
5.448
3.754
3.762
RNA_SAMPLE_00478
SSA_West
West
true
false
Female
37
Tumor
Basal_like
true
62.26
18,884
10.787
10.601
10.802
1.267
0.733
1.021
1.521
9.866
7.553
8.026
6.605
10.072
10.261
10.05
12.819
6.86
6.552
6.497
6.709
7.163
5.163
5.652
5.526
6.313
5.834
3.771
6.953
6.676
5.107
7.47
11.251
6.156
4.994
4.415
3.513
2.136
RNA_SAMPLE_00479
SSA_West
West
true
false
Female
50
Tumor
Luminal_A
true
52.16
17,251
11.068
10.532
10.597
9.888
9.084
9.62
8.383
7.235
9.288
6.56
7.991
3.186
1.884
6.201
2.485
6.447
5.716
6.687
5.433
4.453
4.902
7.617
5.788
7.46
3.969
4.942
4.716
6.03
8.223
5.216
9.448
5.662
5.092
6.517
2.807
3.055
RNA_SAMPLE_00480
SSA_West
West
true
false
Female
79
Tumor
HER2_enriched
true
62.53
15,709
10.051
10.005
9.046
5.915
4.699
5.461
7.02
7.554
9.19
6.92
11.115
7.089
4.487
6.545
7.826
5.581
5.334
3.84
6.292
5.841
6.194
6.752
4.577
7.184
4.046
4.627
6.433
5.729
5.301
6.71
9.229
5.324
5.17
5.21
1.561
0.466
RNA_SAMPLE_00481
SSA_West
West
true
false
Female
52
Tumor
Basal_like
true
66.71
18,350
9.419
10.909
10.809
0.676
2.898
3.138
3.059
10.745
10
8.169
5.817
10.963
12.323
10.199
9.741
4.646
7.173
6.509
5.433
6.193
5.194
4.308
6.698
3.643
4.429
4.2
4.861
6.825
5.807
8.184
10.803
5.677
3.507
5.055
2.494
3.968
RNA_SAMPLE_00482
SSA_West
West
true
false
Female
66
Tumor
Luminal_A
true
61.42
17,380
11.209
11.515
11.429
10.546
9.728
10.435
9.967
7.286
5.932
7.403
6.847
3.963
2.064
3.172
4.036
5.318
3.153
4.266
5.842
6.854
5.291
5.06
6.447
5.51
4.969
4.034
5.594
6.822
6.672
5.679
9.101
3.665
3.77
4.493
3.253
1.667
RNA_SAMPLE_00483
SSA_West
West
true
false
Female
51
Tumor
Luminal_A
true
47.2
17,453
11.484
11.244
9.779
10.392
10.956
9.505
9.763
6.834
6.988
6.877
7.524
3.759
2.749
2.964
2.565
5.039
6.062
4.727
6.57
4.611
5.683
6.252
5.904
3.837
4.42
3.636
4.678
6.223
4.751
6.245
11.165
5.242
4.814
4.871
3.731
2.756
RNA_SAMPLE_00484
SSA_West
West
true
false
Female
56
Normal_breast
Normal_like
false
46.28
13,882
10.053
10.947
10.257
6.055
6.136
4.544
4.705
5.577
5.14
4.821
5.462
4.715
3.453
2.817
3.641
3.995
4.943
4.802
3.984
4.636
4.708
5.66
4.212
4.272
3.464
4.308
4.727
4.262
4.715
5.162
10.126
2.359
2.938
1.911
4.316
3.607
RNA_SAMPLE_00485
SSA_West
West
true
false
Female
49
Tumor
Luminal_A
true
60.9
16,898
10.508
10.813
10.638
9.37
8.902
10.356
8.794
8.295
7.787
4.91
7.428
4.866
2.797
3.921
3.35
6.182
5.054
6.514
5.357
5.215
6.084
6.311
3.397
2.886
4.608
3.704
4.679
5.626
8.911
4.67
10.709
4.391
3.838
4.51
1.863
1.746
RNA_SAMPLE_00486
SSA_West
West
true
false
Female
48
Tumor
HER2_enriched
true
54.2
15,691
10.627
10.784
10.305
6.63
5.336
5.846
3.831
8.582
10.752
9.295
11.627
3.61
6.959
4.807
4.192
5.352
8.073
5.882
6.451
5.317
5.441
5.118
6.78
5.54
3.033
4.655
6.385
6.881
6.168
5.959
10.715
6.987
4.013
5.566
2.568
2.27
RNA_SAMPLE_00487
SSA_West
West
true
false
Female
41
Tumor
Luminal_A
true
42.75
17,432
10.458
10.428
11.301
9.561
9.518
8.664
9.092
7.966
7.112
7.788
5.959
3.933
4.757
4.195
5.396
5.902
5.498
3.146
5.917
6.038
6.533
4.785
5.47
4.069
2.848
4.762
7.267
7.302
6.438
8.046
9.686
5.719
3.946
2.485
2.615
2.903
RNA_SAMPLE_00488
SSA_West
West
true
false
Female
55
Tumor
Basal_like
true
61.88
16,776
10.881
11.57
11.069
1.234
0
0.925
3.343
8.496
9.679
9.64
5.744
10.396
9.703
13.173
9.353
7.421
7.131
6.915
6.18
4.168
4.467
4.803
5.833
6.302
4.583
4.534
7.542
4.41
4.293
4.952
10.74
3.893
5.492
4.772
3.124
2.887
RNA_SAMPLE_00489
SSA_West
West
true
false
Female
41
Tumor
Basal_like
true
62
16,521
11.054
11.432
11.332
1.638
1.135
2.196
3.975
8.947
9.839
9.784
6.572
12.027
8.92
9.344
10.557
7.53
7.528
6.254
7.298
5.121
4.756
4.304
5.376
5.188
5.203
4.807
6.554
6.558
6.081
4.721
9.054
6.129
5.389
4.451
4.094
4.359
RNA_SAMPLE_00490
SSA_West
West
true
false
Female
57
Tumor
Luminal_A
true
69.64
17,508
10.843
10.688
10.782
10.629
10.707
10.454
6.723
7.651
6.699
5.143
6.998
3.863
1.615
2.729
2.173
4.526
6.07
4.878
5.593
6.164
5.109
6.2
6.72
6.262
4.84
5.069
6.395
6.849
4.826
5.925
10.314
4.94
7.002
4.847
1.574
3.044
RNA_SAMPLE_00491
SSA_West
West
true
false
Female
62
Normal_breast
Normal_like
false
56.63
13,952
10.482
10.463
10.47
4.902
6.597
7.667
4.66
3.693
4.562
6.407
4.742
3.939
2.405
5.641
3.146
5.049
4.004
3.908
4.796
5.094
5.776
3.481
4.144
4.381
3.908
2.783
3.905
3.356
3.864
3.225
9.191
3.228
3.89
3.651
4.89
4.984
RNA_SAMPLE_00492
SSA_West
West
true
false
Female
54
Tumor
Basal_like
true
58.72
19,245
11.078
10.225
10.366
2.151
2.881
1.771
1.029
9.79
7.883
9.304
5.843
8.889
12.633
10.52
9.077
6.349
4.57
6.661
7.161
7.932
5.588
4.907
5.686
6.796
4.751
5.049
7.26
7.006
5.098
5.044
8.737
4.542
4.634
6.988
2.435
3.08
RNA_SAMPLE_00493
SSA_West
West
true
false
Female
47
Tumor
Luminal_A
true
58.05
17,232
10.735
10.072
10.999
9.32
9.287
9.694
10.809
5.875
6.592
6.903
7.057
3.742
1.816
3.652
2.402
3.74
5.037
4.981
8.46
6.379
6.206
5.133
5.333
7.814
3.728
4.529
7.841
5.276
6.15
5.982
9.289
5.62
4.108
5.621
3.344
3.718
RNA_SAMPLE_00494
SSA_West
West
true
false
Female
55
Normal_breast
Normal_like
false
48.45
15,467
11.013
9.796
9.896
6.082
6.323
5.636
6.42
4.638
6.267
4.927
4.221
5.21
4.492
2.96
2.984
5.401
3.799
5.121
4.631
5.193
3.181
4.184
5.228
5.947
3.682
4.45
2.518
3.551
4.28
3.938
10.61
2.795
2.802
3.523
3.57
3.274
RNA_SAMPLE_00495
SSA_West
West
true
false
Female
47
Tumor
Luminal_A
true
63.72
15,843
11.409
9.779
10.551
11.627
11.976
9.909
11.104
7.275
6.008
6.967
5.938
1.626
4.105
4.176
2.077
5.357
4.314
5.039
5.064
6.167
5.05
4.364
7.044
5.945
5.106
4.847
6.941
6.437
6.465
6.127
9.649
5.709
4.788
5.094
3.296
3.364
RNA_SAMPLE_00496
SSA_West
West
true
false
Female
60
Normal_breast
Normal_like
false
41.89
15,241
9.99
10.589
10.89
7.3
6.078
6.364
4.412
5.538
3.885
6.202
3.934
2.327
4.406
5.516
4.769
4.446
3.811
4.372
4.926
4.93
4.074
6.158
6.177
6.696
2.306
3.072
4.251
4.005
3.55
3.144
9.202
4.621
1.858
1.754
3.049
4.154
RNA_SAMPLE_00497
SSA_West
West
true
false
Female
30
Normal_breast
Normal_like
false
47.82
15,496
10.147
10.544
10.542
7.075
7.279
5.349
6.355
5.162
5.771
5.385
5.736
4.524
4.009
3.664
4.751
4.665
4.224
3.246
5.225
5.623
3.448
4.448
5.676
4.871
3.85
4.621
3.892
4.384
2.919
4.352
8.929
1.963
2.597
3.439
4.042
3.369
RNA_SAMPLE_00498
SSA_West
West
true
false
Female
46
Tumor
Basal_like
true
67.02
17,382
11.223
10.255
11.417
3.582
2.912
2.488
2.496
9.331
7.627
8.401
5.696
9.264
12.222
11.1
12.639
7.09
4.903
7.607
5.849
6.728
6.857
6.717
6.466
5.89
4.291
5.997
6.772
6.115
6.942
7.649
10.89
4.631
6.364
6.051
2.724
2.34
RNA_SAMPLE_00499
SSA_West
West
true
false
Female
28
Tumor
Luminal_B
true
71.44
18,834
11.485
10.046
10.595
9.057
10.502
9.808
8.776
8.162
8.714
8.748
8.981
5.748
5.496
3.083
3.157
4.509
5.923
5.03
6.096
6.166
5.722
6.316
4.946
4.197
3.692
5.081
7.871
7.511
5.833
6.994
8.918
6.268
5.451
5.664
1.503
3.404
RNA_SAMPLE_00500
SSA_West
West
true
false
Female
34
Tumor
Basal_like
true
75.1
17,409
10.678
10.596
10.364
2.138
0.832
2.5
3.16
8.62
9.434
8.986
6.245
11.652
11.058
11.592
11.186
7.213
6.666
6.681
7.042
5.48
5.95
4.743
3.914
5.628
3.626
6.082
5.748
7.311
5.835
6.521
9.142
4.568
5.764
5.217
3.629
4.033