Datasets:

electricsheepafrica
/

africa-cholera-all

id int64	age_years int64	sex string	under_5 int64	displaced_idp int64	urban int64	water_source string	safe_water_source int64	water_treatment_household int64	improved_sanitation int64	open_defecation int64	handwashing_facility int64	ocv_vaccinated int64	ocv_doses int64	prior_cholera_episode int64	household_cholera_case int64	outbreak_week int64	rainy_season int64	onset_to_presentation_hours int64	rice_water_stool int64	stool_frequency_24h int64	vomiting int64	abdominal_cramps int64	dehydration string	sunken_eyes int64	skin_turgor_reduced int64	lethargy int64	fever int64	temperature_c float64	acute_kidney_injury int64	hypoglycaemia int64	hypovolaemic_shock int64	clinical_diagnosis int64	ors_given int64	iv_fluids_given int64	iv_volume_ml int64	zinc_given int64	antibiotics_given int64	antibiotic_type string	outcome string	hospital_days int64
1	37	F	0	1	0	surface_water	0	0	1	0	0	0	0	0	0	11	1	3	1	5	0	0	none	0	0	0	0	38.2	0	0	0	1	1	0	0	0	0	none	survived	1
2	32	M	0	0	0	tanker	0	0	0	0	1	0	0	0	1	2	0	32	0	11	1	0	none	0	0	0	0	37.4	0	0	0	1	1	0	0	0	0	none	survived	1
3	3	F	1	0	0	unprotected_well	0	0	1	1	0	0	0	0	0	20	1	39	1	7	1	1	severe	1	0	1	1	37.6	0	0	0	1	1	1	1,752	0	1	doxycycline	survived	5
4	40	M	0	1	0	unprotected_well	0	0	0	0	0	1	1	0	0	5	0	49	0	17	1	1	severe	1	0	1	0	37.5	0	0	0	1	1	1	1,576	0	1	azithromycin	survived	1
5	3	M	1	0	1	borehole	1	1	0	1	0	0	0	0	0	11	1	130	1	14	1	1	some	0	0	0	0	35.5	0	0	0	1	1	0	0	0	0	none	survived	1
6	50	M	0	0	1	surface_water	0	0	0	0	0	0	0	0	1	23	1	10	1	18	0	1	none	0	0	0	0	37.1	0	0	0	1	1	0	0	0	0	none	survived	1
7	1	F	1	0	0	surface_water	0	0	0	0	0	0	0	0	1	11	0	20	0	11	1	0	severe	1	1	0	1	36.5	0	0	0	1	1	1	3,125	1	1	doxycycline	survived	3
8	29	F	0	0	1	borehole	1	0	0	0	0	0	0	0	1	5	0	1	1	13	1	1	some	0	0	0	0	36.5	0	0	0	1	1	0	0	0	0	none	survived	1
9	1	F	1	1	1	unprotected_well	0	0	0	0	0	0	0	0	0	21	1	7	1	7	0	1	severe	1	1	0	0	37	0	0	0	1	1	1	1,809	1	1	doxycycline	survived	1
10	13	M	0	0	0	piped	1	0	1	0	0	0	0	1	0	8	1	1	0	3	0	1	none	0	0	0	0	36.3	0	0	0	1	1	0	0	0	0	none	survived	5
11	40	F	0	0	1	protected_well	1	0	1	1	0	0	0	0	0	4	1	28	1	7	1	0	none	0	0	0	0	38.1	0	0	0	1	1	0	0	0	0	none	survived	6
12	66	F	0	0	0	borehole	1	0	0	1	0	1	2	0	0	14	1	108	0	12	0	0	none	0	0	0	0	36.2	0	0	0	1	1	0	0	0	0	none	survived	2
13	15	M	0	0	0	surface_water	0	0	0	0	1	0	0	0	0	15	1	30	1	4	0	0	severe	1	1	1	1	38	0	0	0	1	1	1	1,342	0	0	none	survived	1
14	50	F	0	1	0	unprotected_well	0	1	0	0	1	0	0	0	1	18	1	8	1	5	0	1	none	0	0	0	0	36.8	0	0	0	1	1	0	0	0	0	none	survived	5
15	3	M	1	1	1	surface_water	0	0	0	0	1	1	1	0	0	23	1	33	1	15	0	0	none	0	0	0	0	37.1	0	0	0	1	1	0	0	0	0	none	survived	6
16	63	F	0	1	1	surface_water	0	0	0	1	0	1	2	0	1	4	1	17	0	17	0	0	none	0	0	0	1	38.3	0	0	0	1	1	0	0	0	0	none	survived	1
17	30	M	0	0	1	unprotected_well	0	1	1	0	0	0	0	0	0	24	1	26	1	10	1	1	some	1	0	0	0	36.4	0	0	0	1	1	0	0	0	0	none	survived	1
18	7	F	0	0	0	protected_well	1	0	0	0	0	0	0	0	0	20	1	28	1	4	1	0	severe	1	1	1	0	35.7	1	0	0	1	1	1	2,716	0	1	doxycycline	survived	6
19	63	M	0	0	0	protected_well	1	0	1	0	0	0	0	0	0	20	0	33	0	5	1	1	severe	0	1	1	1	36.4	0	0	1	1	1	1	1,568	0	1	doxycycline	survived	1
20	75	F	0	0	0	piped	1	0	0	0	0	0	0	0	0	16	1	86	1	18	1	1	some	1	0	0	0	37.5	0	0	0	1	1	1	2,720	0	0	none	survived	1
21	70	M	0	0	1	protected_well	1	0	0	0	0	0	0	0	0	12	0	105	0	30	1	0	some	1	0	0	0	38.5	0	0	0	1	0	0	0	0	0	none	survived	2
22	5	M	0	0	1	tanker	0	0	0	0	0	1	2	0	0	4	0	1	1	4	1	0	none	0	0	0	0	36.6	0	0	0	1	1	0	0	0	0	none	survived	1
23	23	M	0	0	0	piped	1	0	0	0	1	0	0	0	0	22	1	23	1	8	0	1	severe	1	1	0	0	37.3	0	0	0	1	1	0	0	0	0	none	survived	1
24	56	M	0	0	1	borehole	1	1	0	0	0	0	0	0	0	13	1	27	0	5	1	0	some	0	0	0	0	37.4	0	0	0	1	1	0	0	0	0	none	survived	1
25	50	F	0	0	0	unprotected_well	0	0	0	0	0	0	0	0	1	8	1	2	1	30	1	1	severe	0	1	1	0	36.4	0	0	0	1	1	1	1,175	0	1	doxycycline	survived	1
26	9	M	0	1	1	surface_water	0	1	0	0	0	0	0	0	0	10	1	3	1	21	1	1	some	0	0	0	1	36.3	0	0	0	1	1	1	2,438	0	0	none	survived	4
27	4	M	1	1	0	borehole	1	0	0	0	1	0	0	0	1	5	0	80	1	18	1	0	none	0	0	0	0	36.5	0	0	0	1	1	0	0	0	0	none	survived	2
28	11	M	0	1	1	piped	1	0	0	0	0	0	0	0	0	8	1	6	1	4	1	0	severe	1	0	0	1	37.4	0	0	0	1	1	1	1,403	0	1	doxycycline	survived	2
29	0	M	1	0	1	unprotected_well	0	0	0	0	0	0	0	0	0	15	1	39	1	12	1	1	severe	0	1	0	1	36.3	0	0	0	1	0	1	500	0	0	none	survived	3
30	37	F	0	1	0	surface_water	0	0	1	0	0	1	2	0	0	19	0	26	1	20	1	1	none	0	0	0	0	36.8	0	0	0	1	1	0	0	0	0	none	survived	1
31	1	F	1	0	0	borehole	1	1	0	0	0	0	0	0	0	5	1	22	1	5	0	0	some	1	0	0	0	37	0	0	0	1	1	0	0	0	0	none	survived	4
32	67	M	0	0	0	piped	1	0	0	0	1	0	0	0	0	2	1	68	1	10	1	0	none	0	0	0	0	36.7	0	0	0	1	1	0	0	0	0	none	survived	1
33	6	M	0	0	1	borehole	1	0	0	0	0	0	0	0	1	22	1	33	0	19	1	1	some	1	0	0	0	37.3	0	0	0	1	1	0	0	0	0	none	survived	5
34	1	M	1	0	1	borehole	1	0	0	0	0	0	0	0	1	14	0	19	0	12	1	0	some	1	0	0	0	36.8	0	0	0	1	1	0	0	0	0	none	survived	4
35	7	M	0	0	1	piped	1	0	1	1	0	0	0	0	0	16	0	20	1	10	1	0	some	1	0	0	0	37.5	0	0	0	1	1	0	0	0	0	none	survived	1
36	63	F	0	0	0	protected_well	1	0	0	0	0	0	0	0	0	14	1	5	1	4	1	1	none	0	0	0	0	37.8	0	0	0	1	1	0	0	0	0	none	survived	1
37	47	M	0	0	1	protected_well	1	1	1	0	0	0	0	0	0	22	0	23	1	14	1	0	some	1	0	0	1	36.8	0	0	0	1	1	0	0	0	0	none	survived	8
38	59	F	0	0	0	protected_well	1	0	0	0	0	0	0	0	0	9	0	6	1	5	1	1	some	1	0	0	0	38.4	0	0	0	1	1	0	0	0	0	none	survived	1
39	9	F	0	1	0	borehole	1	0	0	1	1	0	0	0	0	20	0	2	1	14	1	0	none	0	0	0	1	36	0	0	0	1	1	0	0	0	0	none	survived	1
40	25	F	0	0	1	piped	1	0	0	0	0	0	0	0	0	18	1	10	0	12	1	1	none	0	0	0	0	36.3	0	0	0	1	1	0	0	0	0	none	survived	9
41	1	F	1	1	1	piped	1	0	0	1	0	0	0	0	1	4	0	28	1	17	1	1	none	0	0	0	0	37.2	0	0	0	1	1	0	0	0	0	none	survived	6
42	3	F	1	1	1	borehole	1	0	0	0	0	0	0	0	0	6	1	25	0	14	1	1	none	0	0	0	0	36	0	0	0	1	1	0	0	0	0	none	survived	7
43	2	F	1	0	1	unprotected_well	0	0	0	0	0	0	0	0	0	2	1	82	1	3	1	0	none	0	0	0	1	37.1	0	0	0	1	1	0	0	0	0	none	survived	1
44	2	M	1	0	1	piped	1	0	0	1	1	0	0	0	0	15	1	10	1	7	1	0	none	0	0	0	1	36.1	0	0	0	1	1	0	0	0	0	none	survived	4
45	18	F	0	1	1	protected_well	1	0	0	0	1	0	0	0	0	21	0	4	1	13	1	1	severe	1	0	0	0	36.8	0	0	0	1	0	0	0	0	1	doxycycline	survived	2
46	25	F	0	0	1	piped	1	0	0	0	1	0	0	0	1	17	0	41	1	13	1	0	some	0	0	0	0	37.2	0	0	0	1	1	0	0	0	0	none	survived	1
47	20	M	0	0	1	surface_water	0	0	0	0	0	0	0	0	0	22	1	12	0	30	0	1	none	0	0	0	0	35.5	0	0	0	1	1	0	0	0	0	none	survived	3
48	71	M	0	0	1	borehole	1	0	0	0	0	0	0	1	0	16	1	33	1	10	1	0	severe	1	1	1	1	37.8	0	0	1	1	0	1	2,329	0	0	none	survived	2
49	76	M	0	0	1	unprotected_well	0	0	0	1	0	0	0	0	1	16	0	99	1	3	0	1	some	0	0	0	0	37	0	0	0	1	1	1	613	0	0	none	survived	1
50	6	M	0	0	0	surface_water	0	0	0	0	1	0	0	0	0	25	0	27	0	30	1	1	severe	1	1	1	0	36.5	0	0	0	1	1	1	503	0	0	none	survived	1
51	76	M	0	1	1	piped	1	0	0	0	0	0	0	0	0	25	1	16	0	8	1	1	some	0	0	0	0	37	0	0	0	1	1	1	3,120	0	0	none	survived	11
52	13	F	0	1	0	borehole	1	1	0	0	0	0	0	0	0	6	1	15	1	26	1	0	severe	0	1	0	0	36.9	0	0	0	1	1	1	1,908	0	0	none	survived	3
53	42	F	0	0	0	unprotected_well	0	0	0	0	0	0	0	0	0	17	0	87	1	3	0	1	severe	1	1	0	0	37.8	0	0	0	1	1	1	2,142	0	1	doxycycline	survived	3
54	2	F	1	0	0	unprotected_well	0	0	1	0	1	0	0	0	1	13	0	20	1	4	1	1	some	1	0	0	0	36.6	0	0	0	1	1	0	0	0	0	none	survived	14
55	74	F	0	0	1	piped	1	0	0	0	0	0	0	0	1	23	1	38	0	14	1	1	severe	1	0	1	0	37.6	0	0	0	1	1	0	0	0	1	azithromycin	survived	1
56	1	M	1	0	1	surface_water	0	0	1	0	0	0	0	0	0	21	1	12	0	14	0	1	severe	1	0	1	0	37.1	0	1	0	1	1	1	2,754	1	1	doxycycline	survived	2
57	19	M	0	0	0	borehole	1	0	0	1	0	0	0	0	0	25	1	51	0	27	1	1	severe	1	0	1	0	35.8	0	0	1	1	1	1	2,609	0	1	ciprofloxacin	survived	2
58	2	F	1	0	0	surface_water	0	1	0	0	0	0	0	0	0	2	0	3	0	8	1	1	some	1	0	0	0	37.1	0	0	0	1	1	0	0	1	0	none	survived	4
59	42	F	0	0	0	tanker	0	0	0	0	0	1	2	0	1	5	0	21	0	11	1	0	some	1	0	0	0	36.6	0	0	0	1	1	0	0	0	0	none	survived	1
60	31	M	0	0	1	protected_well	1	0	1	0	0	0	0	0	0	2	1	5	0	5	1	1	none	0	0	0	0	37.3	0	0	0	1	1	0	0	0	0	none	survived	1
61	5	M	0	0	0	protected_well	1	0	1	0	0	0	0	0	1	17	1	4	1	3	0	1	severe	0	1	0	0	37.1	0	0	0	1	1	1	2,731	0	1	doxycycline	survived	1
62	3	F	1	0	0	surface_water	0	1	0	0	1	0	0	0	1	7	1	8	1	8	1	0	severe	1	1	0	1	36.4	0	1	0	1	1	1	1,638	0	1	doxycycline	survived	2
63	48	F	0	0	1	unprotected_well	0	0	0	0	0	0	0	0	1	14	1	1	1	8	0	0	severe	1	1	0	1	37.2	0	0	0	1	1	1	500	0	0	none	survived	2
64	60	M	0	0	1	protected_well	1	0	0	0	0	0	0	0	0	25	1	26	0	7	1	0	none	0	0	0	0	37.8	0	0	0	1	1	0	0	0	0	none	survived	4
65	21	F	0	0	1	protected_well	1	1	1	0	0	0	0	0	0	13	1	13	1	8	1	1	severe	1	1	0	1	36.1	0	0	0	1	1	1	2,231	0	1	doxycycline	survived	6
66	4	F	1	0	0	tanker	0	0	0	0	0	0	0	1	0	6	0	1	1	8	1	0	none	0	0	0	0	38	0	0	0	1	1	0	0	0	0	none	survived	1
67	2	M	1	1	0	tanker	0	0	0	1	0	0	0	1	0	12	0	69	0	15	1	0	none	0	0	0	0	36.7	0	0	0	1	1	0	0	1	0	none	survived	1
68	21	M	0	0	1	tanker	0	0	0	1	1	0	0	0	0	22	1	9	1	18	1	0	none	0	0	0	0	36.2	0	0	0	1	0	0	0	0	0	none	survived	1
69	45	M	0	0	0	protected_well	1	0	0	0	0	0	0	0	0	9	1	42	1	3	1	0	severe	1	1	1	0	37	0	0	1	1	1	1	2,615	0	1	doxycycline	survived	3
70	12	M	0	0	0	piped	1	0	0	0	1	0	0	0	1	21	1	31	1	4	1	0	none	0	0	0	1	36.7	0	0	0	1	1	0	0	0	0	none	survived	1
71	55	M	0	0	1	unprotected_well	0	0	0	1	1	0	0	0	0	1	1	31	0	9	0	1	some	0	0	0	0	37.7	0	0	0	1	1	0	0	0	0	none	survived	5
72	3	M	1	0	1	surface_water	0	0	0	0	0	0	0	0	0	8	1	46	1	4	0	1	severe	1	1	1	0	37.2	0	0	0	1	1	1	842	1	1	azithromycin	survived	1
73	27	F	0	1	1	borehole	1	0	1	0	1	0	0	0	0	1	1	2	1	6	0	0	none	0	0	0	0	36.8	0	0	0	1	1	0	0	0	0	none	survived	7
74	64	M	0	0	0	protected_well	1	0	1	0	0	1	2	1	0	23	0	45	0	6	1	1	severe	1	1	1	0	37.3	0	0	0	1	1	1	2,035	0	1	doxycycline	survived	1
75	11	M	0	0	1	tanker	0	0	0	0	1	0	0	0	0	15	1	8	0	6	1	0	severe	1	0	1	0	37.1	0	0	0	1	0	0	0	0	1	doxycycline	survived	1
76	9	M	0	0	1	surface_water	0	0	0	1	1	0	0	0	0	4	1	51	1	6	0	1	none	0	0	0	1	37.7	0	0	0	1	1	0	0	0	0	none	survived	3
77	3	F	1	0	1	protected_well	1	0	0	0	1	0	0	0	0	24	1	9	1	19	1	1	none	0	0	0	0	37.7	0	0	0	1	0	0	0	0	0	none	survived	4
78	3	F	1	0	1	piped	1	0	1	0	0	0	0	0	0	11	1	9	0	30	1	0	severe	0	1	1	1	36.2	0	0	1	1	1	1	1,277	1	0	none	survived	1
79	11	M	0	0	1	piped	1	0	0	0	0	0	0	0	0	8	1	9	1	28	0	1	some	1	0	0	0	37.8	0	0	0	1	1	0	0	0	0	none	survived	6
80	4	M	1	1	1	tanker	0	0	1	0	0	0	0	0	0	2	1	29	1	22	1	0	severe	1	1	0	0	38.1	1	0	0	1	1	1	1,607	0	1	azithromycin	survived	1
81	15	F	0	0	1	unprotected_well	0	0	0	0	0	0	0	0	0	13	1	9	1	5	1	1	none	0	0	0	0	37.3	0	0	0	1	1	0	0	0	0	none	survived	3
82	2	M	1	0	0	piped	1	0	1	0	0	0	0	1	0	1	0	10	1	3	1	0	none	0	0	0	0	37.4	0	0	0	1	1	0	0	1	0	none	survived	1
83	10	F	0	0	1	unprotected_well	0	0	1	0	0	1	2	0	1	24	0	4	0	30	1	0	none	0	0	0	0	37	0	0	0	1	1	0	0	0	0	none	survived	2
84	21	F	0	0	0	tanker	0	0	1	0	0	0	0	1	0	24	1	24	1	9	1	0	none	0	0	0	0	36.5	0	0	0	1	1	0	0	0	0	none	survived	1
85	66	M	0	0	1	surface_water	0	0	0	0	0	0	0	0	0	17	1	27	1	4	1	1	none	0	0	0	0	38.7	0	0	0	1	1	0	0	0	0	none	survived	2
86	13	F	0	1	0	tanker	0	0	1	0	0	0	0	0	1	20	0	41	1	24	0	0	severe	1	0	0	0	37.3	0	0	0	1	1	1	992	0	0	none	survived	1
87	49	M	0	0	1	unprotected_well	0	0	1	0	0	0	0	0	0	6	1	50	1	18	1	0	severe	1	1	0	0	38.3	0	0	0	1	1	0	0	0	1	doxycycline	survived	1
88	18	F	0	0	1	protected_well	1	0	1	0	0	0	0	0	0	17	1	1	1	17	0	1	none	0	0	0	0	38.3	0	0	0	1	1	0	0	0	0	none	survived	2
89	77	F	0	1	0	piped	1	0	1	0	0	0	0	0	0	4	0	60	1	4	1	0	severe	1	0	0	0	36.9	0	0	0	1	1	1	3,616	0	1	azithromycin	survived	6
90	65	F	0	0	1	borehole	1	0	0	0	0	0	0	0	0	13	1	1	1	7	1	1	some	0	0	0	0	37.5	0	0	0	1	1	0	0	0	0	none	survived	3
91	3	F	1	0	0	protected_well	1	0	0	0	0	0	0	0	0	18	0	26	1	12	1	0	severe	1	0	1	0	38.1	0	0	0	1	1	1	665	0	1	doxycycline	survived	1
92	19	F	0	0	0	surface_water	0	0	0	0	0	0	0	0	1	12	1	54	1	15	0	0	severe	0	1	1	0	36.7	0	0	0	1	1	1	3,157	0	0	none	survived	2
93	43	M	0	1	1	surface_water	0	0	0	0	1	0	0	0	0	25	1	15	1	11	0	1	some	0	0	0	1	36.7	0	0	0	1	1	0	0	0	0	none	survived	3
94	0	F	1	0	1	surface_water	0	0	0	0	0	0	0	0	0	14	1	10	0	19	1	0	none	0	0	0	0	38	0	0	0	1	1	0	0	0	0	none	survived	2
95	2	M	1	0	1	surface_water	0	0	0	1	0	0	0	1	0	8	1	9	1	3	1	1	severe	1	1	1	0	36.7	0	0	0	1	1	1	1,064	0	0	none	survived	4
96	10	F	0	0	1	piped	1	0	1	0	0	0	0	0	1	17	1	1	1	14	1	0	some	0	0	0	0	37.8	0	0	0	1	1	0	0	0	0	none	survived	1
97	23	F	0	1	1	unprotected_well	0	0	0	0	0	0	0	0	1	6	0	29	1	3	1	0	severe	1	1	1	0	36.7	0	0	0	1	1	0	0	0	1	doxycycline	survived	1
98	11	M	0	1	1	borehole	1	0	0	0	1	0	0	0	1	14	1	10	1	13	1	1	severe	1	1	0	0	37.9	0	0	1	1	0	1	2,007	0	1	ciprofloxacin	survived	2
99	71	F	0	1	0	unprotected_well	0	0	0	1	0	0	0	0	0	3	1	72	1	29	1	1	none	0	0	0	0	37.1	0	0	0	1	1	0	0	0	0	none	survived	1
100	42	M	0	1	0	piped	1	0	0	0	0	0	0	0	1	25	1	22	1	6	1	1	some	1	0	0	0	36.1	0	0	0	1	1	1	2,317	0	0	none	survived	1

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Cholera & Waterborne Disease Outbreaks Dataset

Abstract

This dataset provides 30,000 simulated cholera outbreak records (10,000 per scenario) from sub-Saharan Africa. Each record contains 45+ variables including WASH context, dehydration severity, rehydration treatment, OCV vaccination, and outcomes. Three settings: cholera treatment centre (CFR 0.4%), district hospital (0.8%), and community outbreak (3.1%).

1. Introduction

Since mid-2021, the world has seen a resurgence of cholera with SSA bearing the heaviest burden. Over 230,000 cases and 4,000 deaths were recorded across 14 countries in Eastern/Southern Africa since 2023 (UNICEF 2024). CFR should be <1% with proper rehydration but reaches 3-5% in under-resourced settings. Insufficient WASH access remains the main predisposing factor. The GTFCC targets 90% reduction by 2030.

This dataset is entirely simulated. It must not be used for clinical decision-making.

2. Methodology

2.1 Parameterization

Parameter	Value	Source
Cases E/S Africa (2023-24)	230K+	UNICEF 2024
Deaths	4,000+	UNICEF 2024
CFR target	<1%	WHO/GTFCC
CFR untreated	25-50%	WHO 2024
Deaths within 24h admission	63%	PubMed 2024
OCV Euvichol-S prequalified	2024	WHO 2024
GTFCC reduction target	90% by 2030	GTFCC

2.2 Scenario Design

Scenario	Facility	IV Fluids	OCV	CFR
Cholera treatment centre	CTC/MSF	Yes	30%	0.4%
District hospital	Basic ward	Yes	10%	0.8%
Community outbreak	ORP only	No	3%	3.1%

3. Schema

Column	Type	Description
id	int	Unique identifier
age_years	int	Patient age
sex	categorical	M / F
under_5	binary	Under 5 years
pregnant	binary	Pregnant
displaced_idp	binary	Displaced/IDP
water_source	categorical	piped / borehole / protected_well / unprotected / surface / tanker
safe_water_source	binary	Safe water
improved_sanitation	binary	Improved sanitation
open_defecation	binary	Open defecation
handwashing_facility	binary	Handwashing facility
ocv_vaccinated	binary	OCV vaccinated
ocv_doses	int	OCV doses (0-2)
household_cholera_case	binary	Household case
outbreak_week	int	Epidemic week
rainy_season	binary	Rainy season
onset_to_presentation_hours	int	Presentation delay
rice_water_stool	binary	Rice-water stool
stool_frequency_24h	int	Stool frequency
vomiting	binary	Vomiting
dehydration	categorical	none / some / severe
sunken_eyes	binary	Sunken eyes
skin_turgor_reduced	binary	Reduced skin turgor
acute_kidney_injury	binary	AKI
hypovolaemic_shock	binary	Shock
ors_given	binary	ORS given
iv_fluids_given	binary	IV fluids
iv_volume_ml	int	IV volume (mL)
zinc_given	binary	Zinc (under-5)
antibiotics_given	binary	Antibiotics
antibiotic_type	categorical	doxycycline / azithromycin / ciprofloxacin / none
outcome	categorical	survived / died
hospital_days	int	Hospital stay

4. Validation

Validation Report

Key validation checks:

CFR gradient: 0.4% → 0.8% → 3.1% ✓
Severe dehydration: ~25% of cases ✓
ORS coverage: ~90% across all settings ✓
IV fluids: Available at CTC/district, not community ✓
Under-5 higher CFR: Children more vulnerable ✓
WASH association: Unsafe water linked to worse outcomes ✓

5. Usage

from datasets import load_dataset
dataset = load_dataset("electricsheepafrica/cholera-waterborne-outbreaks", "district_hospital")
df = dataset["train"].to_pandas()

python generate_dataset.py --all-scenarios --n 10000 --seed 42

6. Limitations

Simulated: Not derived from real cholera surveillance.
No geospatial: No GPS or outbreak mapping.
No V. cholerae serotyping: No O1/O139 distinction.
No environmental: No rainfall or water quality data.
Snapshot: No multi-wave epidemic modelling.

7. References

WHO (2025). Cholera kills more people for second consecutive year.
UNICEF (2024). Cholera outbreak Eastern and Southern Africa.
WHO Africa (2024). Cholera in the WHO African Region.
GTFCC. Global roadmap to end cholera by 2030.
WHO (2024). Cholera fact sheet.
PMC (2024). Cholera in SSA: neglected drivers and opportunities.

Citation

@dataset{esa_cholera_2025,
  title={Cholera and Waterborne Disease Outbreaks Dataset},
  author={Electric Sheep Africa},
  year={2025},
  publisher={Hugging Face},
  url={https://huggingface.co/datasets/electricsheepafrica/cholera-waterborne-outbreaks}
}

License

CC-BY-4.0

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