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- sidecars/colombo_dengue/colombo_dengue_s0023_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0028_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0042_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0049_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0050_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0084_hard_negative_water_urban_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0105_hard_negative_water_urban_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0123_hard_negative_water_urban_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0130_hard_negative_water_urban_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0148_exposure_context_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0156_exposure_context_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0185_random_ecological_sidecar.json +144 -0
- sidecars/colombo_dengue/colombo_dengue_s0196_random_ecological_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0202_random_ecological_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0204_random_ecological_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0211_random_ecological_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0217_random_ecological_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0230_uncertain_sparse_context_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0232_uncertain_sparse_context_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0233_uncertain_sparse_context_sidecar.json +149 -0
- sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0003_label_positive_jitter_sidecar.json +149 -0
- sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0005_label_positive_jitter_sidecar.json +149 -0
- sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0006_label_positive_jitter_sidecar.json +149 -0
- sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0008_label_positive_jitter_sidecar.json +149 -0
- sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0011_label_positive_jitter_sidecar.json +149 -0
- sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0014_label_positive_jitter_sidecar.json +149 -0
- sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0017_label_positive_jitter_sidecar.json +149 -0
- sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0021_label_positive_jitter_sidecar.json +149 -0
- sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0022_label_positive_jitter_sidecar.json +149 -0
- sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0027_label_positive_jitter_sidecar.json +149 -0
- sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0029_label_positive_jitter_sidecar.json +149 -0
- sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0030_label_positive_jitter_sidecar.json +149 -0
- sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0033_label_positive_jitter_sidecar.json +149 -0
- sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0034_label_positive_jitter_sidecar.json +149 -0
- sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0035_label_positive_jitter_sidecar.json +149 -0
- sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0037_label_positive_jitter_sidecar.json +149 -0
- sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0038_label_positive_jitter_sidecar.json +149 -0
- sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0040_label_positive_jitter_sidecar.json +149 -0
- sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0043_label_positive_jitter_sidecar.json +149 -0
- sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0046_label_positive_jitter_sidecar.json +149 -0
- sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0048_label_positive_jitter_sidecar.json +149 -0
- sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0051_label_positive_jitter_sidecar.json +149 -0
- sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0052_label_positive_jitter_sidecar.json +149 -0
- sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0054_label_positive_jitter_sidecar.json +149 -0
- sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0055_label_positive_jitter_sidecar.json +149 -0
- sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0056_label_positive_jitter_sidecar.json +149 -0
- sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0059_label_positive_jitter_sidecar.json +149 -0
- sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0061_label_positive_jitter_sidecar.json +149 -0
- sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0064_label_positive_jitter_sidecar.json +149 -0
- sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0067_label_positive_jitter_sidecar.json +149 -0
sidecars/colombo_dengue/colombo_dengue_s0023_label_positive_jitter_sidecar.json
ADDED
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@@ -0,0 +1,149 @@
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| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
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| 5 |
+
"chip_id": "colombo_dengue_s0023_label_positive_jitter",
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| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
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| 15 |
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"center": {
|
| 16 |
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"lon": 79.87004456059202,
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| 17 |
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"lat": 6.92038772119784
|
| 18 |
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},
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| 19 |
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"bbox": [
|
| 20 |
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| 21 |
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| 22 |
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| 23 |
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6.942870761345808
|
| 24 |
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],
|
| 25 |
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"panel_order": [
|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0023_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "d88aeff51ec095827cbc27559aea489c26e7a75dd716f5070eafd90161df692b",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0023_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0023_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0023_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0023_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0023_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0023_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0023_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_vector": [
|
| 66 |
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"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
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}
|
| 69 |
+
},
|
| 70 |
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"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
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"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 104.5513,
|
| 84 |
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"repair_attempts": 0
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| 85 |
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},
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| 86 |
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"numeric_features": {
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| 87 |
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"raster_stats": {
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| 88 |
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"rainfall_chirps": {
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| 89 |
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"valid_pixels": 262144,
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| 90 |
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"min": -2970.4202,
|
| 91 |
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"max": 17.6304,
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| 92 |
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"mean": -378.0756,
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| 93 |
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"median": -92.2109,
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| 94 |
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"p90": 17.267
|
| 95 |
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},
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| 96 |
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"land_cover_worldcover": {
|
| 97 |
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"valid_pixels": 0
|
| 98 |
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},
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| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 257878,
|
| 101 |
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"min": 0.0083,
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| 102 |
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"max": 636.7942,
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| 103 |
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"mean": 106.3851,
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| 104 |
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"median": 68.009,
|
| 105 |
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"p90": 255.5501
|
| 106 |
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},
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| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
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"valid_pixels": 0
|
| 109 |
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},
|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
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"valid_pixels": 0
|
| 112 |
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},
|
| 113 |
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"jrc_gsw_transitions": {
|
| 114 |
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"valid_pixels": 0
|
| 115 |
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},
|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
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"valid_pixels": 0
|
| 118 |
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}
|
| 119 |
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},
|
| 120 |
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"osm_counts": {
|
| 121 |
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"health_facilities": 71,
|
| 122 |
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"major_roads": 3550,
|
| 123 |
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"schools_waterpoints": 168,
|
| 124 |
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"urban_landuse": 16300,
|
| 125 |
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"water_surface": 51,
|
| 126 |
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"waterways": 45
|
| 127 |
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},
|
| 128 |
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"label_counts": {
|
| 129 |
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"vector_label": 18,
|
| 130 |
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"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 0,
|
| 132 |
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"disease_aggregate": 0
|
| 133 |
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}
|
| 134 |
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},
|
| 135 |
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"label_quality": {
|
| 136 |
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"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
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},
|
| 139 |
+
"license_flags": {
|
| 140 |
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"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0028_label_positive_jitter_sidecar.json
ADDED
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|
|
|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0028_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.86950267210368,
|
| 17 |
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"lat": 6.92394034418645
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
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|
| 24 |
+
],
|
| 25 |
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"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0028_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "3de995c61b68e8da5b555e463348a2ac4499e8a2de57239ad8953b721efb0a64",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0028_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0028_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0028_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0028_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0028_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0028_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0028_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 104.4587,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
+
"min": -2629.2332,
|
| 91 |
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"max": 17.5662,
|
| 92 |
+
"mean": -378.0557,
|
| 93 |
+
"median": -106.6081,
|
| 94 |
+
"p90": 17.2337
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 256996,
|
| 101 |
+
"min": 0.0083,
|
| 102 |
+
"max": 623.7445,
|
| 103 |
+
"mean": 116.9236,
|
| 104 |
+
"median": 78.4444,
|
| 105 |
+
"p90": 272.7799
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 68,
|
| 122 |
+
"major_roads": 3542,
|
| 123 |
+
"schools_waterpoints": 166,
|
| 124 |
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"urban_landuse": 16298,
|
| 125 |
+
"water_surface": 52,
|
| 126 |
+
"waterways": 44
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 14,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0042_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0042_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.86574527298183,
|
| 17 |
+
"lat": 6.922518305923253
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
6.945001346071221
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0042_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "1b32c32f28ebf41ea819db30a7b92cef8550ca3c686a14ebec172a6042f11d55",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0042_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0042_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0042_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0042_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0042_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0042_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0042_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 104.4075,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": -3164.5059,
|
| 91 |
+
"max": 17.4784,
|
| 92 |
+
"mean": -495.6052,
|
| 93 |
+
"median": -223.2826,
|
| 94 |
+
"p90": 17.0999
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 247471,
|
| 101 |
+
"min": 0.0083,
|
| 102 |
+
"max": 628.4416,
|
| 103 |
+
"mean": 110.0481,
|
| 104 |
+
"median": 67.1605,
|
| 105 |
+
"p90": 270.2493
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 66,
|
| 122 |
+
"major_roads": 3507,
|
| 123 |
+
"schools_waterpoints": 162,
|
| 124 |
+
"urban_landuse": 15075,
|
| 125 |
+
"water_surface": 49,
|
| 126 |
+
"waterways": 33
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 14,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0049_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0049_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.86596084640945,
|
| 17 |
+
"lat": 6.920335783778699
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
79.88860888568438,
|
| 23 |
+
6.942818823926667
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0049_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "130685fdcb1bf7e8087b1ca85dc72ffc241f4a06b525a761161ec0dd6b9eb3de",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0049_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0049_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0049_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0049_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0049_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0049_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0049_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 104.1746,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": -3419.6382,
|
| 91 |
+
"max": 17.52,
|
| 92 |
+
"mean": -504.095,
|
| 93 |
+
"median": -217.6627,
|
| 94 |
+
"p90": 17.1191
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 247111,
|
| 101 |
+
"min": 0.0083,
|
| 102 |
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"max": 623.5419,
|
| 103 |
+
"mean": 103.6025,
|
| 104 |
+
"median": 62.8376,
|
| 105 |
+
"p90": 258.7576
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 67,
|
| 122 |
+
"major_roads": 3495,
|
| 123 |
+
"schools_waterpoints": 161,
|
| 124 |
+
"urban_landuse": 15275,
|
| 125 |
+
"water_surface": 49,
|
| 126 |
+
"waterways": 34
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 18,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0050_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
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|
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|
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|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0050_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 79.85769563172195,
|
| 17 |
+
"lat": 6.897212402756537
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
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|
| 23 |
+
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|
| 24 |
+
],
|
| 25 |
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"panel_order": [
|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0050_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "348cad1c719465fa3e531696842e0e13413be8f69e5232b621c4732f4ca0e725",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0050_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0050_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
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"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0050_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0050_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0050_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0050_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0050_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
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"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 103.0629,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
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"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
+
"min": -7977.813,
|
| 91 |
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"max": 17.7938,
|
| 92 |
+
"mean": -1944.8888,
|
| 93 |
+
"median": -1452.0178,
|
| 94 |
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"p90": 16.8726
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 169544,
|
| 101 |
+
"min": 0.0752,
|
| 102 |
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"max": 265.2194,
|
| 103 |
+
"mean": 69.9815,
|
| 104 |
+
"median": 59.0925,
|
| 105 |
+
"p90": 143.218
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 76,
|
| 122 |
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"major_roads": 2703,
|
| 123 |
+
"schools_waterpoints": 153,
|
| 124 |
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"urban_landuse": 11202,
|
| 125 |
+
"water_surface": 26,
|
| 126 |
+
"waterways": 13
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 7,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0084_hard_negative_water_urban_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0084_hard_negative_water_urban",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.88621117637454,
|
| 17 |
+
"lat": 6.851834286738195
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
6.874317326886163
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0084_hard_negative_water_urban_packet.png",
|
| 33 |
+
"sha256": "49c749e0aa38e7b1865056485682c78eaa798c94b38dfee1f05dbf09f2774721",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0084_hard_negative_water_urban",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0084_hard_negative_water_urban/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0084_hard_negative_water_urban/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0084_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0084_hard_negative_water_urban/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0084_hard_negative_water_urban/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0084_hard_negative_water_urban/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "hard_negative_water_urban",
|
| 83 |
+
"packet_std": 106.2591,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": -2264.7258,
|
| 91 |
+
"max": 20.0763,
|
| 92 |
+
"mean": -270.8648,
|
| 93 |
+
"median": 18.3125,
|
| 94 |
+
"p90": 19.2163
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 261756,
|
| 101 |
+
"min": 0.0363,
|
| 102 |
+
"max": 209.8298,
|
| 103 |
+
"mean": 69.8901,
|
| 104 |
+
"median": 68.3473,
|
| 105 |
+
"p90": 117.621
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 45,
|
| 122 |
+
"major_roads": 2648,
|
| 123 |
+
"schools_waterpoints": 78,
|
| 124 |
+
"urban_landuse": 46514,
|
| 125 |
+
"water_surface": 30,
|
| 126 |
+
"waterways": 54
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 1,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "hard_negative_water_urban",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0105_hard_negative_water_urban_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0105_hard_negative_water_urban",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.87514446181298,
|
| 17 |
+
"lat": 6.917436123290475
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
79.85249656162473,
|
| 21 |
+
6.894953083142507,
|
| 22 |
+
79.89779236200123,
|
| 23 |
+
6.939919163438443
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0105_hard_negative_water_urban_packet.png",
|
| 33 |
+
"sha256": "f2f953db46465e2d445cefa1a0c3550e3618244ecd0977d489ed9aa5af936b82",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0105_hard_negative_water_urban",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0105_hard_negative_water_urban/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0105_hard_negative_water_urban/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0105_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0105_hard_negative_water_urban/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0105_hard_negative_water_urban/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0105_hard_negative_water_urban/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "hard_negative_water_urban",
|
| 83 |
+
"packet_std": 105.326,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": -2683.1858,
|
| 91 |
+
"max": 17.7996,
|
| 92 |
+
"mean": -263.4297,
|
| 93 |
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"median": 16.5638,
|
| 94 |
+
"p90": 17.4702
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 261714,
|
| 101 |
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"min": 0.0207,
|
| 102 |
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"max": 528.8019,
|
| 103 |
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"mean": 99.0004,
|
| 104 |
+
"median": 64.8069,
|
| 105 |
+
"p90": 233.8213
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 77,
|
| 122 |
+
"major_roads": 3419,
|
| 123 |
+
"schools_waterpoints": 173,
|
| 124 |
+
"urban_landuse": 15629,
|
| 125 |
+
"water_surface": 49,
|
| 126 |
+
"waterways": 50
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 12,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "hard_negative_water_urban",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0123_hard_negative_water_urban_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0123_hard_negative_water_urban",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.90046968427157,
|
| 17 |
+
"lat": 6.785208319021526
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
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|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0123_hard_negative_water_urban_packet.png",
|
| 33 |
+
"sha256": "b8ad852e3a5989748119dd4fbd8257d7460ebfefe43244c84dbbf8cb457f7eaf",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0123_hard_negative_water_urban",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0123_hard_negative_water_urban/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0123_hard_negative_water_urban/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0123_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0123_hard_negative_water_urban/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0123_hard_negative_water_urban/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0123_hard_negative_water_urban/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "hard_negative_water_urban",
|
| 83 |
+
"packet_std": 110.3461,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 13.9504,
|
| 91 |
+
"max": 21.508,
|
| 92 |
+
"mean": 19.2797,
|
| 93 |
+
"median": 19.5364,
|
| 94 |
+
"p90": 20.9661
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 212371,
|
| 101 |
+
"min": 0.0105,
|
| 102 |
+
"max": 1436.6182,
|
| 103 |
+
"mean": 55.8074,
|
| 104 |
+
"median": 47.3116,
|
| 105 |
+
"p90": 104.5009
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 6,
|
| 122 |
+
"major_roads": 1229,
|
| 123 |
+
"schools_waterpoints": 27,
|
| 124 |
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"urban_landuse": 26431,
|
| 125 |
+
"water_surface": 4,
|
| 126 |
+
"waterways": 10
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 1,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "hard_negative_water_urban",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0130_hard_negative_water_urban_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0130_hard_negative_water_urban",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.96903563601562,
|
| 17 |
+
"lat": 6.948121595330474
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
79.99168501110786,
|
| 23 |
+
6.970604635478442
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0130_hard_negative_water_urban_packet.png",
|
| 33 |
+
"sha256": "373c7721cc9883aa31db8cf247f00dc159aa8aa6ae8fcd7642beed5fe5448ba7",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0130_hard_negative_water_urban",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0130_hard_negative_water_urban/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0130_hard_negative_water_urban/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0130_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0130_hard_negative_water_urban/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0130_hard_negative_water_urban/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0130_hard_negative_water_urban/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "hard_negative_water_urban",
|
| 83 |
+
"packet_std": 105.646,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 19.3604,
|
| 91 |
+
"max": 22.4157,
|
| 92 |
+
"mean": 20.9196,
|
| 93 |
+
"median": 20.9628,
|
| 94 |
+
"p90": 21.8564
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 84047,
|
| 101 |
+
"min": 0.0781,
|
| 102 |
+
"max": 95.1774,
|
| 103 |
+
"mean": 20.3377,
|
| 104 |
+
"median": 18.5091,
|
| 105 |
+
"p90": 37.3311
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 1,
|
| 122 |
+
"major_roads": 1009,
|
| 123 |
+
"schools_waterpoints": 8,
|
| 124 |
+
"urban_landuse": 12447,
|
| 125 |
+
"water_surface": 53,
|
| 126 |
+
"waterways": 17
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "hard_negative_water_urban",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0148_exposure_context_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0148_exposure_context",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.86330997074894,
|
| 17 |
+
"lat": 6.901177062246031
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
79.84066284934552,
|
| 21 |
+
6.878694022098063,
|
| 22 |
+
79.88595709215237,
|
| 23 |
+
6.923660102393999
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0148_exposure_context_packet.png",
|
| 33 |
+
"sha256": "ea74d005d8be19f7d5c8aa7ebe3747bb24a8426b61953af5c1f824af30b86191",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0148_exposure_context",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0148_exposure_context/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0148_exposure_context/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0148_exposure_context/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0148_exposure_context/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0148_exposure_context/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0148_exposure_context/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "exposure_context",
|
| 83 |
+
"packet_std": 103.3636,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": -6339.4907,
|
| 91 |
+
"max": 17.7917,
|
| 92 |
+
"mean": -1225.5581,
|
| 93 |
+
"median": -703.8629,
|
| 94 |
+
"p90": 17.3217
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 207977,
|
| 101 |
+
"min": 0.0752,
|
| 102 |
+
"max": 575.5202,
|
| 103 |
+
"mean": 69.0855,
|
| 104 |
+
"median": 57.0808,
|
| 105 |
+
"p90": 144.9797
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 87,
|
| 122 |
+
"major_roads": 3123,
|
| 123 |
+
"schools_waterpoints": 165,
|
| 124 |
+
"urban_landuse": 14624,
|
| 125 |
+
"water_surface": 38,
|
| 126 |
+
"waterways": 29
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 12,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "exposure_context",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0156_exposure_context_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0156_exposure_context",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 80.09065838083734,
|
| 17 |
+
"lat": 6.914954050293382
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
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|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0156_exposure_context_packet.png",
|
| 33 |
+
"sha256": "8da1d937fc2db133d431444efa082ddb1b6dabe1e4747af2409c4766b0f9b89f",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0156_exposure_context",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0156_exposure_context/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0156_exposure_context/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0156_exposure_context/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0156_exposure_context/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0156_exposure_context/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0156_exposure_context/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "exposure_context",
|
| 83 |
+
"packet_std": 102.4936,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 21.7577,
|
| 91 |
+
"max": 26.5039,
|
| 92 |
+
"mean": 24.0494,
|
| 93 |
+
"median": 23.772,
|
| 94 |
+
"p90": 25.4831
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 168180,
|
| 101 |
+
"min": 0.0177,
|
| 102 |
+
"max": 93.1163,
|
| 103 |
+
"mean": 9.3621,
|
| 104 |
+
"median": 6.3996,
|
| 105 |
+
"p90": 21.0098
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 1,
|
| 122 |
+
"major_roads": 495,
|
| 123 |
+
"schools_waterpoints": 4,
|
| 124 |
+
"urban_landuse": 6473,
|
| 125 |
+
"water_surface": 14,
|
| 126 |
+
"waterways": 11
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "exposure_context",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0185_random_ecological_sidecar.json
ADDED
|
@@ -0,0 +1,144 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0185_random_ecological",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.83362853724971,
|
| 17 |
+
"lat": 6.797937786727442
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
79.81098631706594,
|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
6.82042082687541
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0185_random_ecological_packet.png",
|
| 33 |
+
"sha256": "707e33997fb6b0ed4668fb1bc18ddd3b6c2ea1d7ef2696e1bf52442fea3c2747",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0185_random_ecological",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0185_random_ecological/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0185_random_ecological/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0185_random_ecological/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0185_random_ecological/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0185_random_ecological/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0185_random_ecological/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "random_ecological",
|
| 83 |
+
"packet_std": 120.065,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": -9999.0,
|
| 91 |
+
"max": -3743.5588,
|
| 92 |
+
"mean": -7836.415,
|
| 93 |
+
"median": -8271.0703,
|
| 94 |
+
"p90": -4647.3062
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 0
|
| 101 |
+
},
|
| 102 |
+
"jrc_gsw_occurrence": {
|
| 103 |
+
"valid_pixels": 0
|
| 104 |
+
},
|
| 105 |
+
"jrc_gsw_seasonality": {
|
| 106 |
+
"valid_pixels": 0
|
| 107 |
+
},
|
| 108 |
+
"jrc_gsw_transitions": {
|
| 109 |
+
"valid_pixels": 0
|
| 110 |
+
},
|
| 111 |
+
"jrc_gsw_extent": {
|
| 112 |
+
"valid_pixels": 0
|
| 113 |
+
}
|
| 114 |
+
},
|
| 115 |
+
"osm_counts": {
|
| 116 |
+
"health_facilities": 0,
|
| 117 |
+
"major_roads": 0,
|
| 118 |
+
"schools_waterpoints": 0,
|
| 119 |
+
"urban_landuse": 0,
|
| 120 |
+
"water_surface": 0,
|
| 121 |
+
"waterways": 0
|
| 122 |
+
},
|
| 123 |
+
"label_counts": {
|
| 124 |
+
"vector_label": 0,
|
| 125 |
+
"disease_label": 0,
|
| 126 |
+
"intermediate_host_label": 0,
|
| 127 |
+
"disease_aggregate": 0
|
| 128 |
+
}
|
| 129 |
+
},
|
| 130 |
+
"label_quality": {
|
| 131 |
+
"tier": "hard_or_ecological_negative",
|
| 132 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 133 |
+
},
|
| 134 |
+
"license_flags": {
|
| 135 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 136 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 137 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 138 |
+
"weak_labels": "presence_and_survey_biased"
|
| 139 |
+
},
|
| 140 |
+
"sampling": {
|
| 141 |
+
"sample_type": "random_ecological",
|
| 142 |
+
"sampler_version": "stratified-v0.1"
|
| 143 |
+
}
|
| 144 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0196_random_ecological_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0196_random_ecological",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 80.10521843597141,
|
| 17 |
+
"lat": 6.849356061796629
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
6.871839101944597
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0196_random_ecological_packet.png",
|
| 33 |
+
"sha256": "f7105801a526c0a1c7bceb3c2628c02c60b58598592ba2aa7a92281bb7b36a19",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0196_random_ecological",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0196_random_ecological/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0196_random_ecological/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0196_random_ecological/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0196_random_ecological/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0196_random_ecological/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0196_random_ecological/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
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"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
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"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "random_ecological",
|
| 83 |
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"packet_std": 81.4915,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": 17.7563,
|
| 91 |
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"max": 25.2472,
|
| 92 |
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"mean": 20.7116,
|
| 93 |
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"median": 20.6524,
|
| 94 |
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"p90": 23.3204
|
| 95 |
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},
|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 251281,
|
| 101 |
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"min": 0.0838,
|
| 102 |
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"max": 57.3781,
|
| 103 |
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|
| 104 |
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"median": 6.7085,
|
| 105 |
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"p90": 19.9546
|
| 106 |
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},
|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
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"osm_counts": {
|
| 121 |
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"health_facilities": 7,
|
| 122 |
+
"major_roads": 243,
|
| 123 |
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"schools_waterpoints": 9,
|
| 124 |
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"urban_landuse": 1466,
|
| 125 |
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"water_surface": 0,
|
| 126 |
+
"waterways": 17
|
| 127 |
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},
|
| 128 |
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"label_counts": {
|
| 129 |
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"vector_label": 0,
|
| 130 |
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"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
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}
|
| 134 |
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},
|
| 135 |
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"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "random_ecological",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0202_random_ecological_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0202_random_ecological",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.97027953353302,
|
| 17 |
+
"lat": 6.826634109835907
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
79.9476359585994,
|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
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|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0202_random_ecological_packet.png",
|
| 33 |
+
"sha256": "868ffcdc4323baf079680986a798f48668a6346a0e46d668f1d018eb80c90b85",
|
| 34 |
+
"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0202_random_ecological",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0202_random_ecological/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0202_random_ecological/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0202_random_ecological/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0202_random_ecological/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0202_random_ecological/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0202_random_ecological/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "random_ecological",
|
| 83 |
+
"packet_std": 107.7947,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 20.8606,
|
| 91 |
+
"max": 23.8507,
|
| 92 |
+
"mean": 22.8196,
|
| 93 |
+
"median": 22.8908,
|
| 94 |
+
"p90": 23.5502
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 262144,
|
| 101 |
+
"min": 0.2427,
|
| 102 |
+
"max": 149.2545,
|
| 103 |
+
"mean": 29.1787,
|
| 104 |
+
"median": 25.8785,
|
| 105 |
+
"p90": 54.2091
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 12,
|
| 122 |
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"major_roads": 1304,
|
| 123 |
+
"schools_waterpoints": 13,
|
| 124 |
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"urban_landuse": 5930,
|
| 125 |
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"water_surface": 3,
|
| 126 |
+
"waterways": 9
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 1,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "random_ecological",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0204_random_ecological_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0204_random_ecological",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 80.19627558616737,
|
| 17 |
+
"lat": 6.962112897431085
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
80.21892563597491,
|
| 23 |
+
6.984595937579053
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0204_random_ecological_packet.png",
|
| 33 |
+
"sha256": "ed7c8c91022e1af60fbee82d7a88a05836f4f85934fbfe08a42607f280b43412",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0204_random_ecological",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0204_random_ecological/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0204_random_ecological/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0204_random_ecological/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0204_random_ecological/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0204_random_ecological/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0204_random_ecological/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "random_ecological",
|
| 83 |
+
"packet_std": 55.3099,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 25.7548,
|
| 91 |
+
"max": 29.4913,
|
| 92 |
+
"mean": 27.2259,
|
| 93 |
+
"median": 27.1354,
|
| 94 |
+
"p90": 28.4278
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 177781,
|
| 101 |
+
"min": 0.0133,
|
| 102 |
+
"max": 111.6116,
|
| 103 |
+
"mean": 12.1649,
|
| 104 |
+
"median": 5.1098,
|
| 105 |
+
"p90": 33.5258
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 5,
|
| 122 |
+
"major_roads": 362,
|
| 123 |
+
"schools_waterpoints": 6,
|
| 124 |
+
"urban_landuse": 2939,
|
| 125 |
+
"water_surface": 4,
|
| 126 |
+
"waterways": 4
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "random_ecological",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0211_random_ecological_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0211_random_ecological",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.89744970506382,
|
| 17 |
+
"lat": 6.740279742810216
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
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|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0211_random_ecological_packet.png",
|
| 33 |
+
"sha256": "83a3406e6f1b8214cc66b6aa124a17759001165a465a934666339054223bed6f",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0211_random_ecological",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0211_random_ecological/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0211_random_ecological/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0211_random_ecological/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0211_random_ecological/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0211_random_ecological/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0211_random_ecological/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
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"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
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"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "random_ecological",
|
| 83 |
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"packet_std": 111.8856,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": -1457.2155,
|
| 91 |
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"max": 16.0725,
|
| 92 |
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"mean": -57.2766,
|
| 93 |
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"median": 6.0015,
|
| 94 |
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"p90": 13.1346
|
| 95 |
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},
|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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"valid_pixels": 0
|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 38996,
|
| 101 |
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"min": 0.0155,
|
| 102 |
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"max": 429.9864,
|
| 103 |
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|
| 104 |
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"median": 64.2502,
|
| 105 |
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"p90": 186.5493
|
| 106 |
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},
|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
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},
|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
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"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
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"health_facilities": 27,
|
| 122 |
+
"major_roads": 889,
|
| 123 |
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"schools_waterpoints": 17,
|
| 124 |
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"urban_landuse": 23300,
|
| 125 |
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"water_surface": 5,
|
| 126 |
+
"waterways": 7
|
| 127 |
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},
|
| 128 |
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"label_counts": {
|
| 129 |
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|
| 130 |
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|
| 131 |
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|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "random_ecological",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0217_random_ecological_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0217_random_ecological",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 80.05935379280241,
|
| 17 |
+
"lat": 6.878792596469887
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
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|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0217_random_ecological_packet.png",
|
| 33 |
+
"sha256": "77e185939760f1b78cab865eb37bd52be02f2e4e48bf12497c6cf24c96d27e37",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0217_random_ecological",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0217_random_ecological/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0217_random_ecological/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0217_random_ecological/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0217_random_ecological/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0217_random_ecological/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0217_random_ecological/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "random_ecological",
|
| 83 |
+
"packet_std": 92.7325,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 22.5497,
|
| 91 |
+
"max": 24.5712,
|
| 92 |
+
"mean": 23.429,
|
| 93 |
+
"median": 23.3498,
|
| 94 |
+
"p90": 23.8409
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 257400,
|
| 101 |
+
"min": 0.0371,
|
| 102 |
+
"max": 87.7201,
|
| 103 |
+
"mean": 11.0014,
|
| 104 |
+
"median": 8.2583,
|
| 105 |
+
"p90": 23.1187
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 0,
|
| 122 |
+
"major_roads": 461,
|
| 123 |
+
"schools_waterpoints": 2,
|
| 124 |
+
"urban_landuse": 3184,
|
| 125 |
+
"water_surface": 5,
|
| 126 |
+
"waterways": 7
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "random_ecological",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0230_uncertain_sparse_context_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0230_uncertain_sparse_context",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 80.08303763089403,
|
| 17 |
+
"lat": 6.874720950734254
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
80.10568348910118,
|
| 23 |
+
6.897203990882222
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0230_uncertain_sparse_context_packet.png",
|
| 33 |
+
"sha256": "8ef64991acdb2365048d7f596ad1f603690b4d383a38fa9dbb6ce15fc7e84eca",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0230_uncertain_sparse_context",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0230_uncertain_sparse_context/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0230_uncertain_sparse_context/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0230_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0230_uncertain_sparse_context/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0230_uncertain_sparse_context/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0230_uncertain_sparse_context/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "uncertain_sparse_context",
|
| 83 |
+
"packet_std": 94.147,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 20.0154,
|
| 91 |
+
"max": 24.8498,
|
| 92 |
+
"mean": 22.7071,
|
| 93 |
+
"median": 22.9634,
|
| 94 |
+
"p90": 23.9585
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 245609,
|
| 101 |
+
"min": 0.0392,
|
| 102 |
+
"max": 64.1532,
|
| 103 |
+
"mean": 9.7743,
|
| 104 |
+
"median": 6.2663,
|
| 105 |
+
"p90": 23.5188
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 6,
|
| 122 |
+
"major_roads": 244,
|
| 123 |
+
"schools_waterpoints": 6,
|
| 124 |
+
"urban_landuse": 2455,
|
| 125 |
+
"water_surface": 7,
|
| 126 |
+
"waterways": 3
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "uncertain_sparse_context",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0232_uncertain_sparse_context_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0232_uncertain_sparse_context",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.90134514495139,
|
| 17 |
+
"lat": 6.834108932994656
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
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|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0232_uncertain_sparse_context_packet.png",
|
| 33 |
+
"sha256": "1f935ee9cc6826daaa7184cb7f29de5ae0d0738ce9b580c1eda839104fc2d45f",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0232_uncertain_sparse_context",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0232_uncertain_sparse_context/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0232_uncertain_sparse_context/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0232_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0232_uncertain_sparse_context/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0232_uncertain_sparse_context/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0232_uncertain_sparse_context/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
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"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "uncertain_sparse_context",
|
| 83 |
+
"packet_std": 105.5112,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
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"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": 18.1078,
|
| 91 |
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"max": 21.193,
|
| 92 |
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"mean": 19.4737,
|
| 93 |
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"median": 19.3857,
|
| 94 |
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"p90": 20.5175
|
| 95 |
+
},
|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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"valid_pixels": 0
|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 261712,
|
| 101 |
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"min": 0.0369,
|
| 102 |
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"max": 327.8272,
|
| 103 |
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"mean": 43.4652,
|
| 104 |
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"median": 39.5689,
|
| 105 |
+
"p90": 82.9492
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 34,
|
| 122 |
+
"major_roads": 1818,
|
| 123 |
+
"schools_waterpoints": 23,
|
| 124 |
+
"urban_landuse": 26063,
|
| 125 |
+
"water_surface": 28,
|
| 126 |
+
"waterways": 76
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "uncertain_sparse_context",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0233_uncertain_sparse_context_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0233_uncertain_sparse_context",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.91249141797012,
|
| 17 |
+
"lat": 6.86182603754644
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
79.88984617365341,
|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
6.884309077694408
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0233_uncertain_sparse_context_packet.png",
|
| 33 |
+
"sha256": "963a7d3c05477dc4b74f647f4761acb58cdb4ef7f1cc2c0c73c2b88db97a42d4",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0233_uncertain_sparse_context",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0233_uncertain_sparse_context/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0233_uncertain_sparse_context/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0233_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0233_uncertain_sparse_context/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0233_uncertain_sparse_context/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0233_uncertain_sparse_context/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "uncertain_sparse_context",
|
| 83 |
+
"packet_std": 108.0416,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 17.7655,
|
| 91 |
+
"max": 20.8252,
|
| 92 |
+
"mean": 18.8511,
|
| 93 |
+
"median": 18.7458,
|
| 94 |
+
"p90": 19.7926
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 261757,
|
| 101 |
+
"min": 0.0166,
|
| 102 |
+
"max": 235.2802,
|
| 103 |
+
"mean": 52.2066,
|
| 104 |
+
"median": 49.5023,
|
| 105 |
+
"p90": 89.2044
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 51,
|
| 122 |
+
"major_roads": 2235,
|
| 123 |
+
"schools_waterpoints": 53,
|
| 124 |
+
"urban_landuse": 23029,
|
| 125 |
+
"water_surface": 33,
|
| 126 |
+
"waterways": 106
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 1,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "uncertain_sparse_context",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0003_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "niamey_schistosomiasis_s0003_label_positive_jitter",
|
| 6 |
+
"aoi_id": "niamey_schistosomiasis",
|
| 7 |
+
"split": "test",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Niger",
|
| 11 |
+
"name": "Niamey/Niger River, Niger",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 2.183861140803267,
|
| 17 |
+
"lat": 13.399026961176373
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
2.160748983427622,
|
| 21 |
+
13.376543921028405,
|
| 22 |
+
2.2069732981789123,
|
| 23 |
+
13.421510001324341
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/niamey_schistosomiasis/niamey_schistosomiasis_s0003_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "53c5636f2880dfce486b60f1f4625e69bb4e55b1883d2fb8d5bfdb0bf5d9de56",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0003_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0003_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0003_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0003_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0003_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0003_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0003_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/niamey_niger/niamey_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/niamey_niger/niamey_worldpop_2020_100m_arcgis.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/niamey_niger/osm_health_facilities_niamey.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/niamey_niger/osm_major_roads_niamey.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/niamey_niger/osm_schools_waterpoints_niamey.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/niamey_niger/osm_urban_landuse_niamey.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/niamey_niger/osm_water_surface_niamey.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/niamey_niger/osm_waterways_niamey.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/niamey_niger/gbif_freshwater_snails_niamey_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/niamey_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 6.220992,
|
| 78 |
+
"sentinel_datetime": "2025-11-10T10:27:36Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 51.797,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 0.0,
|
| 91 |
+
"max": 0.0,
|
| 92 |
+
"mean": 0.0,
|
| 93 |
+
"median": 0.0,
|
| 94 |
+
"p90": 0.0
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 197893,
|
| 101 |
+
"min": 1.1005,
|
| 102 |
+
"max": 21.268,
|
| 103 |
+
"mean": 2.4341,
|
| 104 |
+
"median": 2.044,
|
| 105 |
+
"p90": 2.3082
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 0,
|
| 122 |
+
"major_roads": 170,
|
| 123 |
+
"schools_waterpoints": 0,
|
| 124 |
+
"urban_landuse": 2988,
|
| 125 |
+
"water_surface": 45,
|
| 126 |
+
"waterways": 3
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 514,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0005_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "niamey_schistosomiasis_s0005_label_positive_jitter",
|
| 6 |
+
"aoi_id": "niamey_schistosomiasis",
|
| 7 |
+
"split": "test",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Niger",
|
| 11 |
+
"name": "Niamey/Niger River, Niger",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 2.176337560754466,
|
| 17 |
+
"lat": 13.503483250659388
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
13.525966290807355
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/niamey_schistosomiasis/niamey_schistosomiasis_s0005_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "1509367c947a0649403f8b80c273e2677c36eaf2e49f8fa8cccd6f1e831a657a",
|
| 34 |
+
"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0005_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0005_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0005_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0005_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0005_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0005_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0005_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/niamey_niger/niamey_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/niamey_niger/niamey_worldpop_2020_100m_arcgis.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/niamey_niger/osm_health_facilities_niamey.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/niamey_niger/osm_major_roads_niamey.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/niamey_niger/osm_schools_waterpoints_niamey.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/niamey_niger/osm_urban_landuse_niamey.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/niamey_niger/osm_water_surface_niamey.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/niamey_niger/osm_waterways_niamey.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/niamey_niger/gbif_freshwater_snails_niamey_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/niamey_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 6.220992,
|
| 78 |
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"sentinel_datetime": "2025-11-10T10:27:36Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 66.1968,
|
| 84 |
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"repair_attempts": 1
|
| 85 |
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},
|
| 86 |
+
"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": 0.0,
|
| 91 |
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"max": 0.0,
|
| 92 |
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"mean": 0.0,
|
| 93 |
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"median": 0.0,
|
| 94 |
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"p90": 0.0
|
| 95 |
+
},
|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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"valid_pixels": 0
|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 262144,
|
| 101 |
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"min": 6.0924,
|
| 102 |
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"max": 24.8801,
|
| 103 |
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"mean": 18.1764,
|
| 104 |
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"median": 16.2889,
|
| 105 |
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"p90": 23.7578
|
| 106 |
+
},
|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 4,
|
| 122 |
+
"major_roads": 1011,
|
| 123 |
+
"schools_waterpoints": 87,
|
| 124 |
+
"urban_landuse": 12199,
|
| 125 |
+
"water_surface": 3,
|
| 126 |
+
"waterways": 12
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
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"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0006_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
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|
|
|
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|
|
|
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|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "niamey_schistosomiasis_s0006_label_positive_jitter",
|
| 6 |
+
"aoi_id": "niamey_schistosomiasis",
|
| 7 |
+
"split": "test",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Niger",
|
| 11 |
+
"name": "Niamey/Niger River, Niger",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 2.0193626256239834,
|
| 17 |
+
"lat": 13.579658223771427
|
| 18 |
+
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|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
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|
| 23 |
+
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|
| 24 |
+
],
|
| 25 |
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"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/niamey_schistosomiasis/niamey_schistosomiasis_s0006_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "e830b15f8948d144c2f9a4df7316a8eb2d35d203649feb4febba1c683dbd701c",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0006_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0006_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0006_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0006_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0006_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0006_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
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"mapbox_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0006_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
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"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/niamey_niger/niamey_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/niamey_niger/niamey_worldpop_2020_100m_arcgis.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/niamey_niger/osm_health_facilities_niamey.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/niamey_niger/osm_major_roads_niamey.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/niamey_niger/osm_schools_waterpoints_niamey.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/niamey_niger/osm_urban_landuse_niamey.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/niamey_niger/osm_water_surface_niamey.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/niamey_niger/osm_waterways_niamey.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/niamey_niger/gbif_freshwater_snails_niamey_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/niamey_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 6.220992,
|
| 78 |
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"sentinel_datetime": "2025-11-10T10:27:36Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 63.6203,
|
| 84 |
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"repair_attempts": 1
|
| 85 |
+
},
|
| 86 |
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"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": 0.0,
|
| 91 |
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"max": 0.0,
|
| 92 |
+
"mean": 0.0,
|
| 93 |
+
"median": 0.0,
|
| 94 |
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"p90": 0.0
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
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"valid_pixels": 233965,
|
| 101 |
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"min": 0.407,
|
| 102 |
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"max": 21.4697,
|
| 103 |
+
"mean": 6.4775,
|
| 104 |
+
"median": 2.6437,
|
| 105 |
+
"p90": 16.9374
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
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"osm_counts": {
|
| 121 |
+
"health_facilities": 1,
|
| 122 |
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"major_roads": 415,
|
| 123 |
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"schools_waterpoints": 18,
|
| 124 |
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"urban_landuse": 1305,
|
| 125 |
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|
| 126 |
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"waterways": 49
|
| 127 |
+
},
|
| 128 |
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"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
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"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
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},
|
| 139 |
+
"license_flags": {
|
| 140 |
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"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
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},
|
| 145 |
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"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0008_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "niamey_schistosomiasis_s0008_label_positive_jitter",
|
| 6 |
+
"aoi_id": "niamey_schistosomiasis",
|
| 7 |
+
"split": "test",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Niger",
|
| 11 |
+
"name": "Niamey/Niger River, Niger",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 2.14781265871007,
|
| 17 |
+
"lat": 13.438063018168789
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
13.460546058316757
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/niamey_schistosomiasis/niamey_schistosomiasis_s0008_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "437d5a880a3da22e5789daa2a94ba9e09823c4619a1fb819a46648106b135c91",
|
| 34 |
+
"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0008_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0008_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0008_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0008_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0008_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0008_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0008_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/niamey_niger/niamey_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/niamey_niger/niamey_worldpop_2020_100m_arcgis.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/niamey_niger/osm_health_facilities_niamey.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/niamey_niger/osm_major_roads_niamey.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/niamey_niger/osm_schools_waterpoints_niamey.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/niamey_niger/osm_urban_landuse_niamey.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/niamey_niger/osm_water_surface_niamey.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/niamey_niger/osm_waterways_niamey.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/niamey_niger/gbif_freshwater_snails_niamey_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/niamey_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
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|
| 77 |
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|
| 78 |
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"sentinel_datetime": "2025-11-10T10:27:36Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 73.6537,
|
| 84 |
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|
| 85 |
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|
| 86 |
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"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": 0.0,
|
| 91 |
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|
| 92 |
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"mean": 0.0,
|
| 93 |
+
"median": 0.0,
|
| 94 |
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"p90": 0.0
|
| 95 |
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|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 209422,
|
| 101 |
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"min": 11.5918,
|
| 102 |
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"max": 23.5248,
|
| 103 |
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|
| 104 |
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"median": 20.5541,
|
| 105 |
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"p90": 22.3477
|
| 106 |
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|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
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|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
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"osm_counts": {
|
| 121 |
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"health_facilities": 2,
|
| 122 |
+
"major_roads": 317,
|
| 123 |
+
"schools_waterpoints": 7,
|
| 124 |
+
"urban_landuse": 5536,
|
| 125 |
+
"water_surface": 32,
|
| 126 |
+
"waterways": 39
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
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"vector_label": 0,
|
| 130 |
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|
| 131 |
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|
| 132 |
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"disease_aggregate": 0
|
| 133 |
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}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0011_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "niamey_schistosomiasis_s0011_label_positive_jitter",
|
| 6 |
+
"aoi_id": "niamey_schistosomiasis",
|
| 7 |
+
"split": "test",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Niger",
|
| 11 |
+
"name": "Niamey/Niger River, Niger",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
+
"lon": 1.951440805852936,
|
| 17 |
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"lat": 13.427838073930127
|
| 18 |
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},
|
| 19 |
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"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
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|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/niamey_schistosomiasis/niamey_schistosomiasis_s0011_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "52f7667ac5ede69065ca2010d9efeeb372a03e9a18fe631e7ef65b2e1fc2ec7d",
|
| 34 |
+
"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0011_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0011_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0011_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0011_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0011_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0011_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0011_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/niamey_niger/niamey_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/niamey_niger/niamey_worldpop_2020_100m_arcgis.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/niamey_niger/osm_health_facilities_niamey.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/niamey_niger/osm_major_roads_niamey.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/niamey_niger/osm_schools_waterpoints_niamey.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/niamey_niger/osm_urban_landuse_niamey.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/niamey_niger/osm_water_surface_niamey.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/niamey_niger/osm_waterways_niamey.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
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|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/niamey_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 6.220992,
|
| 78 |
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"sentinel_datetime": "2025-11-10T10:27:36Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 78.8312,
|
| 84 |
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"repair_attempts": 2
|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": 0.0,
|
| 91 |
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|
| 92 |
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|
| 93 |
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|
| 94 |
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"p90": 0.0
|
| 95 |
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|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 141824,
|
| 101 |
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|
| 102 |
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|
| 103 |
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|
| 104 |
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"median": 0.3999,
|
| 105 |
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"p90": 0.4254
|
| 106 |
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|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
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"valid_pixels": 0
|
| 109 |
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},
|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
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"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
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"jrc_gsw_transitions": {
|
| 114 |
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"valid_pixels": 0
|
| 115 |
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},
|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
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"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
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},
|
| 120 |
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"osm_counts": {
|
| 121 |
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|
| 122 |
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|
| 123 |
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|
| 124 |
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|
| 125 |
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|
| 126 |
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"waterways": 13
|
| 127 |
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},
|
| 128 |
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"label_counts": {
|
| 129 |
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|
| 130 |
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|
| 131 |
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"intermediate_host_label": 0,
|
| 132 |
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"disease_aggregate": 0
|
| 133 |
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}
|
| 134 |
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},
|
| 135 |
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"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0014_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
|
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|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "niamey_schistosomiasis_s0014_label_positive_jitter",
|
| 6 |
+
"aoi_id": "niamey_schistosomiasis",
|
| 7 |
+
"split": "test",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Niger",
|
| 11 |
+
"name": "Niamey/Niger River, Niger",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
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"lon": 2.188904875633562,
|
| 17 |
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"lat": 13.451314970297409
|
| 18 |
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|
| 19 |
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|
| 20 |
+
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
+
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|
| 25 |
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"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/niamey_schistosomiasis/niamey_schistosomiasis_s0014_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "db2eab3c1825842e118e32137a2f3141c76a16853515588b3d33f23528cfc793",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0014_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0014_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
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"sentinel_false_color": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0014_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0014_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0014_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0014_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
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"mapbox_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0014_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
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"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/niamey_niger/niamey_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/niamey_niger/niamey_worldpop_2020_100m_arcgis.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/niamey_niger/osm_health_facilities_niamey.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/niamey_niger/osm_major_roads_niamey.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/niamey_niger/osm_schools_waterpoints_niamey.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/niamey_niger/osm_urban_landuse_niamey.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/niamey_niger/osm_water_surface_niamey.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/niamey_niger/osm_waterways_niamey.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/niamey_niger/gbif_freshwater_snails_niamey_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/niamey_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 6.220992,
|
| 78 |
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"sentinel_datetime": "2025-11-10T10:27:36Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 52.9265,
|
| 84 |
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"repair_attempts": 1
|
| 85 |
+
},
|
| 86 |
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"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": 0.0,
|
| 91 |
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"max": 0.0,
|
| 92 |
+
"mean": 0.0,
|
| 93 |
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"median": 0.0,
|
| 94 |
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"p90": 0.0
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 262144,
|
| 101 |
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"min": 0.7471,
|
| 102 |
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"max": 23.2112,
|
| 103 |
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"mean": 13.1629,
|
| 104 |
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"median": 13.407,
|
| 105 |
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"p90": 21.7236
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
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"osm_counts": {
|
| 121 |
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"health_facilities": 2,
|
| 122 |
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"major_roads": 1593,
|
| 123 |
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"schools_waterpoints": 45,
|
| 124 |
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"urban_landuse": 32102,
|
| 125 |
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|
| 126 |
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"waterways": 57
|
| 127 |
+
},
|
| 128 |
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"label_counts": {
|
| 129 |
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"vector_label": 0,
|
| 130 |
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"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
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}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
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},
|
| 139 |
+
"license_flags": {
|
| 140 |
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"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
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},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
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"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0017_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "niamey_schistosomiasis_s0017_label_positive_jitter",
|
| 6 |
+
"aoi_id": "niamey_schistosomiasis",
|
| 7 |
+
"split": "test",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Niger",
|
| 11 |
+
"name": "Niamey/Niger River, Niger",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 2.161292403047713,
|
| 17 |
+
"lat": 13.470164115088133
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
13.492647155236101
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/niamey_schistosomiasis/niamey_schistosomiasis_s0017_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "921b7d51f027ccfb0c9a088eb1a16b4ffb44d5e2c5e7bd76309e759b3a741787",
|
| 34 |
+
"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0017_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0017_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0017_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0017_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0017_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0017_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0017_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/niamey_niger/niamey_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/niamey_niger/niamey_worldpop_2020_100m_arcgis.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/niamey_niger/osm_health_facilities_niamey.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/niamey_niger/osm_major_roads_niamey.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/niamey_niger/osm_schools_waterpoints_niamey.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/niamey_niger/osm_urban_landuse_niamey.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/niamey_niger/osm_water_surface_niamey.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/niamey_niger/osm_waterways_niamey.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/niamey_niger/gbif_freshwater_snails_niamey_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/niamey_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 6.220992,
|
| 78 |
+
"sentinel_datetime": "2025-11-10T10:27:36Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 72.0154,
|
| 84 |
+
"repair_attempts": 2
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 0.0,
|
| 91 |
+
"max": 0.0,
|
| 92 |
+
"mean": 0.0,
|
| 93 |
+
"median": 0.0,
|
| 94 |
+
"p90": 0.0
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 262144,
|
| 101 |
+
"min": 8.9686,
|
| 102 |
+
"max": 24.2935,
|
| 103 |
+
"mean": 20.7829,
|
| 104 |
+
"median": 22.1709,
|
| 105 |
+
"p90": 23.4907
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 5,
|
| 122 |
+
"major_roads": 1887,
|
| 123 |
+
"schools_waterpoints": 67,
|
| 124 |
+
"urban_landuse": 27485,
|
| 125 |
+
"water_surface": 17,
|
| 126 |
+
"waterways": 65
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0021_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "niamey_schistosomiasis_s0021_label_positive_jitter",
|
| 6 |
+
"aoi_id": "niamey_schistosomiasis",
|
| 7 |
+
"split": "test",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Niger",
|
| 11 |
+
"name": "Niamey/Niger River, Niger",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 2.1873490269933558,
|
| 17 |
+
"lat": 13.40427672615423
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
13.426759766302197
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/niamey_schistosomiasis/niamey_schistosomiasis_s0021_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "4077e9ca30501561867e8c93c14cb16a0d17dc05f8067d262e6eac280fa90e9a",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0021_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0021_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0021_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0021_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0021_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0021_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0021_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/niamey_niger/niamey_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/niamey_niger/niamey_worldpop_2020_100m_arcgis.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/niamey_niger/osm_health_facilities_niamey.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/niamey_niger/osm_major_roads_niamey.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/niamey_niger/osm_schools_waterpoints_niamey.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/niamey_niger/osm_urban_landuse_niamey.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/niamey_niger/osm_water_surface_niamey.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/niamey_niger/osm_waterways_niamey.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/niamey_niger/gbif_freshwater_snails_niamey_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
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},
|
| 70 |
+
"aoi_manifest": "data/manifests/niamey_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
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"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 6.220992,
|
| 78 |
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"sentinel_datetime": "2025-11-10T10:27:36Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 46.998,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": 0.0,
|
| 91 |
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"max": 0.0,
|
| 92 |
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"mean": 0.0,
|
| 93 |
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"median": 0.0,
|
| 94 |
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"p90": 0.0
|
| 95 |
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},
|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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"valid_pixels": 0
|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 210287,
|
| 101 |
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"min": 0.8798,
|
| 102 |
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"max": 20.7472,
|
| 103 |
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"mean": 3.0517,
|
| 104 |
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"median": 2.0101,
|
| 105 |
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"p90": 2.5653
|
| 106 |
+
},
|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 0,
|
| 122 |
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"major_roads": 204,
|
| 123 |
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"schools_waterpoints": 0,
|
| 124 |
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"urban_landuse": 3867,
|
| 125 |
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"water_surface": 56,
|
| 126 |
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"waterways": 4
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
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"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 514,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0022_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
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"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "niamey_schistosomiasis_s0022_label_positive_jitter",
|
| 6 |
+
"aoi_id": "niamey_schistosomiasis",
|
| 7 |
+
"split": "test",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Niger",
|
| 11 |
+
"name": "Niamey/Niger River, Niger",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 2.1805899780419837,
|
| 17 |
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"lat": 13.390522535131911
|
| 18 |
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|
| 19 |
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"bbox": [
|
| 20 |
+
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|
| 21 |
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|
| 22 |
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|
| 23 |
+
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|
| 24 |
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|
| 25 |
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"panel_order": [
|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/niamey_schistosomiasis/niamey_schistosomiasis_s0022_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "8084ca03bce8deebb92b6042737e8196f0904a6d9198dcad25048b5cdf9c159d",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
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"simsat_raw_dir": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0022_label_positive_jitter",
|
| 40 |
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"sentinel_rgb": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0022_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
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"sentinel_false_color": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0022_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0022_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0022_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
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"mapbox_satellite": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0022_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
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"mapbox_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0022_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
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"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/niamey_niger/niamey_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/niamey_niger/niamey_worldpop_2020_100m_arcgis.tif",
|
| 50 |
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"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/niamey_niger/osm_health_facilities_niamey.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/niamey_niger/osm_major_roads_niamey.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/niamey_niger/osm_schools_waterpoints_niamey.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/niamey_niger/osm_urban_landuse_niamey.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/niamey_niger/osm_water_surface_niamey.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/niamey_niger/osm_waterways_niamey.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
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"data/raw/map_gbif/niamey_niger/gbif_freshwater_snails_niamey_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/niamey_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
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"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 6.220992,
|
| 78 |
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"sentinel_datetime": "2025-11-10T10:27:36Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 62.8768,
|
| 84 |
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|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": 0.0,
|
| 91 |
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"max": 0.0,
|
| 92 |
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"mean": 0.0,
|
| 93 |
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"median": 0.0,
|
| 94 |
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"p90": 0.0
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
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"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 200793,
|
| 101 |
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"min": 1.2687,
|
| 102 |
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"max": 21.2633,
|
| 103 |
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"mean": 2.3121,
|
| 104 |
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"median": 2.0434,
|
| 105 |
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|
| 106 |
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},
|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
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"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
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}
|
| 119 |
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},
|
| 120 |
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"osm_counts": {
|
| 121 |
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|
| 122 |
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"major_roads": 141,
|
| 123 |
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|
| 124 |
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|
| 125 |
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|
| 126 |
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|
| 127 |
+
},
|
| 128 |
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"label_counts": {
|
| 129 |
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"vector_label": 0,
|
| 130 |
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"disease_label": 0,
|
| 131 |
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|
| 132 |
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|
| 133 |
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}
|
| 134 |
+
},
|
| 135 |
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"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
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"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
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},
|
| 139 |
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"license_flags": {
|
| 140 |
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"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
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},
|
| 145 |
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"sampling": {
|
| 146 |
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"sample_type": "label_positive_jitter",
|
| 147 |
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"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0027_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "niamey_schistosomiasis_s0027_label_positive_jitter",
|
| 6 |
+
"aoi_id": "niamey_schistosomiasis",
|
| 7 |
+
"split": "test",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Niger",
|
| 11 |
+
"name": "Niamey/Niger River, Niger",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 2.1776272395680767,
|
| 17 |
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"lat": 13.569591077360144
|
| 18 |
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},
|
| 19 |
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"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
13.592074117508112
|
| 24 |
+
],
|
| 25 |
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"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
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|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/niamey_schistosomiasis/niamey_schistosomiasis_s0027_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "c0defaf4846d4f338088152f1cee1cd88fabdd577dbda99f2c0157de034496b4",
|
| 34 |
+
"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0027_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0027_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0027_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0027_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0027_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0027_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0027_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/niamey_niger/niamey_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/niamey_niger/niamey_worldpop_2020_100m_arcgis.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/niamey_niger/osm_health_facilities_niamey.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/niamey_niger/osm_major_roads_niamey.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/niamey_niger/osm_schools_waterpoints_niamey.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/niamey_niger/osm_urban_landuse_niamey.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/niamey_niger/osm_water_surface_niamey.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/niamey_niger/osm_waterways_niamey.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/niamey_niger/gbif_freshwater_snails_niamey_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/niamey_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 6.220992,
|
| 78 |
+
"sentinel_datetime": "2025-11-10T10:27:36Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 64.8282,
|
| 84 |
+
"repair_attempts": 1
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 0.0,
|
| 91 |
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"max": 0.0,
|
| 92 |
+
"mean": 0.0,
|
| 93 |
+
"median": 0.0,
|
| 94 |
+
"p90": 0.0
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 262144,
|
| 101 |
+
"min": 0.2835,
|
| 102 |
+
"max": 21.7324,
|
| 103 |
+
"mean": 5.5229,
|
| 104 |
+
"median": 4.5659,
|
| 105 |
+
"p90": 11.7961
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 0,
|
| 122 |
+
"major_roads": 113,
|
| 123 |
+
"schools_waterpoints": 2,
|
| 124 |
+
"urban_landuse": 505,
|
| 125 |
+
"water_surface": 3,
|
| 126 |
+
"waterways": 47
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0029_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "niamey_schistosomiasis_s0029_label_positive_jitter",
|
| 6 |
+
"aoi_id": "niamey_schistosomiasis",
|
| 7 |
+
"split": "test",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Niger",
|
| 11 |
+
"name": "Niamey/Niger River, Niger",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 2.0479500891542632,
|
| 17 |
+
"lat": 13.490315701347773
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
13.512798741495741
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/niamey_schistosomiasis/niamey_schistosomiasis_s0029_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "da93e7ab6ca8c42728912f8af5d189fcb300f384641a52f0a452d42050115186",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0029_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0029_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0029_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0029_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0029_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0029_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0029_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/niamey_niger/niamey_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/niamey_niger/niamey_worldpop_2020_100m_arcgis.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/niamey_niger/osm_health_facilities_niamey.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/niamey_niger/osm_major_roads_niamey.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/niamey_niger/osm_schools_waterpoints_niamey.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/niamey_niger/osm_urban_landuse_niamey.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/niamey_niger/osm_water_surface_niamey.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/niamey_niger/osm_waterways_niamey.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/niamey_niger/gbif_freshwater_snails_niamey_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/niamey_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 6.220992,
|
| 78 |
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"sentinel_datetime": "2025-11-10T10:27:36Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 77.4887,
|
| 84 |
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"repair_attempts": 1
|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": 0.0,
|
| 91 |
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"max": 0.0,
|
| 92 |
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"mean": 0.0,
|
| 93 |
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"median": 0.0,
|
| 94 |
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"p90": 0.0
|
| 95 |
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},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
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"valid_pixels": 0
|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 260046,
|
| 101 |
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"min": 0.2898,
|
| 102 |
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|
| 103 |
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|
| 104 |
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"median": 20.4752,
|
| 105 |
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"p90": 24.6148
|
| 106 |
+
},
|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
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"osm_counts": {
|
| 121 |
+
"health_facilities": 1,
|
| 122 |
+
"major_roads": 199,
|
| 123 |
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"schools_waterpoints": 13,
|
| 124 |
+
"urban_landuse": 2098,
|
| 125 |
+
"water_surface": 31,
|
| 126 |
+
"waterways": 58
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
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"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0030_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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|
| 4 |
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"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
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"chip_id": "niamey_schistosomiasis_s0030_label_positive_jitter",
|
| 6 |
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|
| 7 |
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"split": "test",
|
| 8 |
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|
| 9 |
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"primary_disease": "schistosomiasis",
|
| 10 |
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|
| 11 |
+
"name": "Niamey/Niger River, Niger",
|
| 12 |
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|
| 13 |
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|
| 14 |
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|
| 15 |
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|
| 16 |
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|
| 17 |
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|
| 18 |
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| 19 |
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|
| 20 |
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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| 25 |
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|
| 26 |
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|
| 27 |
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|
| 28 |
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|
| 29 |
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"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
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"path": "image_packets/niamey_schistosomiasis/niamey_schistosomiasis_s0030_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "f83a9b169b05334f6bdbc5b66b64d3df2afd0116d2a6ca93d9e6126c1cbc7061",
|
| 34 |
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|
| 35 |
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|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
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"simsat_raw_dir": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0030_label_positive_jitter",
|
| 40 |
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|
| 41 |
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"sentinel_false_color": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0030_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0030_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0030_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
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"mapbox_satellite": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0030_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
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"mapbox_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0030_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
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"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/niamey_niger/niamey_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/niamey_niger/niamey_worldpop_2020_100m_arcgis.tif",
|
| 50 |
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"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/niamey_niger/osm_health_facilities_niamey.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/niamey_niger/osm_major_roads_niamey.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/niamey_niger/osm_schools_waterpoints_niamey.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/niamey_niger/osm_urban_landuse_niamey.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/niamey_niger/osm_water_surface_niamey.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/niamey_niger/osm_waterways_niamey.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
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"data/raw/map_gbif/niamey_niger/gbif_freshwater_snails_niamey_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/niamey_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 6.220992,
|
| 78 |
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"sentinel_datetime": "2025-11-10T10:27:36Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 80.4424,
|
| 84 |
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|
| 85 |
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},
|
| 86 |
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|
| 87 |
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|
| 88 |
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|
| 89 |
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|
| 90 |
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|
| 91 |
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"max": 0.0,
|
| 92 |
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"mean": 0.0,
|
| 93 |
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"median": 0.0,
|
| 94 |
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"p90": 0.0
|
| 95 |
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},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
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|
| 98 |
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},
|
| 99 |
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|
| 100 |
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|
| 101 |
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|
| 102 |
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|
| 103 |
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|
| 104 |
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"median": 0.2796,
|
| 105 |
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|
| 106 |
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},
|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
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|
| 109 |
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},
|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
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"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
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"valid_pixels": 0
|
| 118 |
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}
|
| 119 |
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},
|
| 120 |
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"osm_counts": {
|
| 121 |
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|
| 122 |
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|
| 123 |
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|
| 124 |
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|
| 125 |
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|
| 126 |
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|
| 127 |
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},
|
| 128 |
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|
| 129 |
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|
| 130 |
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|
| 131 |
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|
| 132 |
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|
| 133 |
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}
|
| 134 |
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},
|
| 135 |
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"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
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"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
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},
|
| 139 |
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"license_flags": {
|
| 140 |
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"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
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},
|
| 145 |
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"sampling": {
|
| 146 |
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"sample_type": "label_positive_jitter",
|
| 147 |
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"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0033_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "niamey_schistosomiasis_s0033_label_positive_jitter",
|
| 6 |
+
"aoi_id": "niamey_schistosomiasis",
|
| 7 |
+
"split": "test",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Niger",
|
| 11 |
+
"name": "Niamey/Niger River, Niger",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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|
| 17 |
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"lat": 13.531846493602485
|
| 18 |
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},
|
| 19 |
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"bbox": [
|
| 20 |
+
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|
| 21 |
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|
| 22 |
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|
| 23 |
+
13.554329533750453
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
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|
| 28 |
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"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/niamey_schistosomiasis/niamey_schistosomiasis_s0033_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "fa77b8a34a783e05caa9a8b9df8dbfbced7273f7a25b69c1799101db707582bb",
|
| 34 |
+
"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0033_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0033_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0033_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0033_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0033_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0033_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0033_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/niamey_niger/niamey_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/niamey_niger/niamey_worldpop_2020_100m_arcgis.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/niamey_niger/osm_health_facilities_niamey.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/niamey_niger/osm_major_roads_niamey.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/niamey_niger/osm_schools_waterpoints_niamey.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/niamey_niger/osm_urban_landuse_niamey.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/niamey_niger/osm_water_surface_niamey.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/niamey_niger/osm_waterways_niamey.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/niamey_niger/gbif_freshwater_snails_niamey_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/niamey_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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|
| 77 |
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|
| 78 |
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"sentinel_datetime": "2025-11-10T10:27:36Z",
|
| 79 |
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|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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|
| 84 |
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|
| 85 |
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|
| 86 |
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|
| 87 |
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|
| 88 |
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|
| 89 |
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|
| 90 |
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|
| 91 |
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|
| 92 |
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|
| 93 |
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"median": 0.0,
|
| 94 |
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"p90": 0.0
|
| 95 |
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|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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|
| 98 |
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|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 250776,
|
| 101 |
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|
| 102 |
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|
| 103 |
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|
| 104 |
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|
| 105 |
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"p90": 23.7223
|
| 106 |
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|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
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"valid_pixels": 0
|
| 109 |
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|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
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"valid_pixels": 0
|
| 112 |
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},
|
| 113 |
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"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
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|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
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}
|
| 119 |
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},
|
| 120 |
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"osm_counts": {
|
| 121 |
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"health_facilities": 107,
|
| 122 |
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"major_roads": 1940,
|
| 123 |
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"schools_waterpoints": 216,
|
| 124 |
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"urban_landuse": 30543,
|
| 125 |
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"water_surface": 12,
|
| 126 |
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"waterways": 37
|
| 127 |
+
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|
| 128 |
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"label_counts": {
|
| 129 |
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|
| 130 |
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|
| 131 |
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|
| 132 |
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"disease_aggregate": 0
|
| 133 |
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|
| 134 |
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},
|
| 135 |
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"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0034_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "niamey_schistosomiasis_s0034_label_positive_jitter",
|
| 6 |
+
"aoi_id": "niamey_schistosomiasis",
|
| 7 |
+
"split": "test",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Niger",
|
| 11 |
+
"name": "Niamey/Niger River, Niger",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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|
| 16 |
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|
| 17 |
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|
| 18 |
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},
|
| 19 |
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"bbox": [
|
| 20 |
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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],
|
| 25 |
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"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/niamey_schistosomiasis/niamey_schistosomiasis_s0034_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "79049f6f78bf8961af9e39f5154e3a9eca95969463bd8ce1120d858bcbec38f0",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0034_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0034_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0034_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0034_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0034_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0034_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0034_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
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"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/niamey_niger/niamey_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/niamey_niger/niamey_worldpop_2020_100m_arcgis.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/niamey_niger/osm_health_facilities_niamey.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/niamey_niger/osm_major_roads_niamey.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/niamey_niger/osm_schools_waterpoints_niamey.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/niamey_niger/osm_urban_landuse_niamey.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/niamey_niger/osm_water_surface_niamey.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/niamey_niger/osm_waterways_niamey.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
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|
| 67 |
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]
|
| 68 |
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}
|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/niamey_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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|
| 77 |
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|
| 78 |
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"sentinel_datetime": "2025-11-10T10:27:36Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 67.2956,
|
| 84 |
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|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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|
| 90 |
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|
| 91 |
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|
| 92 |
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|
| 93 |
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|
| 94 |
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"p90": 0.0
|
| 95 |
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|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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|
| 98 |
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|
| 99 |
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|
| 100 |
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|
| 101 |
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|
| 102 |
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|
| 103 |
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|
| 104 |
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|
| 105 |
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|
| 106 |
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|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
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"valid_pixels": 0
|
| 109 |
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},
|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
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"valid_pixels": 0
|
| 112 |
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},
|
| 113 |
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"jrc_gsw_transitions": {
|
| 114 |
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"valid_pixels": 0
|
| 115 |
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},
|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
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"valid_pixels": 0
|
| 118 |
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}
|
| 119 |
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},
|
| 120 |
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"osm_counts": {
|
| 121 |
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|
| 122 |
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|
| 123 |
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|
| 124 |
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|
| 125 |
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|
| 126 |
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|
| 127 |
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},
|
| 128 |
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|
| 129 |
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|
| 130 |
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|
| 131 |
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|
| 132 |
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"disease_aggregate": 0
|
| 133 |
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}
|
| 134 |
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},
|
| 135 |
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"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0035_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
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|
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|
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|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
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"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
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"chip_id": "niamey_schistosomiasis_s0035_label_positive_jitter",
|
| 6 |
+
"aoi_id": "niamey_schistosomiasis",
|
| 7 |
+
"split": "test",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
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"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Niger",
|
| 11 |
+
"name": "Niamey/Niger River, Niger",
|
| 12 |
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"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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|
| 17 |
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|
| 18 |
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|
| 19 |
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|
| 20 |
+
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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|
| 25 |
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"panel_order": [
|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
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|
| 28 |
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"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/niamey_schistosomiasis/niamey_schistosomiasis_s0035_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "03b3f63a867eab4a0793d70b20a71f04d3cabf9ec9c767f0e8afa61c156e8b5e",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
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"simsat_raw_dir": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0035_label_positive_jitter",
|
| 40 |
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"sentinel_rgb": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0035_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
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"sentinel_false_color": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0035_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0035_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0035_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
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"mapbox_satellite": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0035_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
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"mapbox_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0035_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
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"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/niamey_niger/niamey_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/niamey_niger/niamey_worldpop_2020_100m_arcgis.tif",
|
| 50 |
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"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/niamey_niger/osm_health_facilities_niamey.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/niamey_niger/osm_major_roads_niamey.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/niamey_niger/osm_schools_waterpoints_niamey.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/niamey_niger/osm_urban_landuse_niamey.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/niamey_niger/osm_water_surface_niamey.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/niamey_niger/osm_waterways_niamey.overpass.json"
|
| 63 |
+
},
|
| 64 |
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"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
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"data/raw/map_gbif/niamey_niger/gbif_freshwater_snails_niamey_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
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"aoi_manifest": "data/manifests/niamey_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 6.220992,
|
| 78 |
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"sentinel_datetime": "2025-11-10T10:27:36Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 45.2113,
|
| 84 |
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|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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|
| 88 |
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|
| 89 |
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|
| 90 |
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"min": 0.0,
|
| 91 |
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"max": 0.0,
|
| 92 |
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"mean": 0.0,
|
| 93 |
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"median": 0.0,
|
| 94 |
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"p90": 0.0
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
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"valid_pixels": 0
|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 215861,
|
| 101 |
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|
| 102 |
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|
| 103 |
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"mean": 3.2505,
|
| 104 |
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"median": 1.9846,
|
| 105 |
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"p90": 2.611
|
| 106 |
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},
|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
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"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
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"valid_pixels": 0
|
| 118 |
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}
|
| 119 |
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},
|
| 120 |
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|
| 121 |
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|
| 122 |
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"major_roads": 230,
|
| 123 |
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|
| 124 |
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|
| 125 |
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|
| 126 |
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|
| 127 |
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},
|
| 128 |
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"label_counts": {
|
| 129 |
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"vector_label": 0,
|
| 130 |
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"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 514,
|
| 132 |
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"disease_aggregate": 0
|
| 133 |
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}
|
| 134 |
+
},
|
| 135 |
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"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
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},
|
| 139 |
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"license_flags": {
|
| 140 |
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"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
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},
|
| 145 |
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"sampling": {
|
| 146 |
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"sample_type": "label_positive_jitter",
|
| 147 |
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"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0037_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "niamey_schistosomiasis_s0037_label_positive_jitter",
|
| 6 |
+
"aoi_id": "niamey_schistosomiasis",
|
| 7 |
+
"split": "test",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Niger",
|
| 11 |
+
"name": "Niamey/Niger River, Niger",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
+
"lon": 1.9890838189547093,
|
| 17 |
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"lat": 13.406875300362417
|
| 18 |
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|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
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|
| 23 |
+
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|
| 24 |
+
],
|
| 25 |
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"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
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|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/niamey_schistosomiasis/niamey_schistosomiasis_s0037_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "4f1ea695e1b6d8e4a85b3fed9c188569c591563f4044478cb701f4e7dea2d6da",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0037_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0037_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0037_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0037_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0037_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0037_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0037_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/niamey_niger/niamey_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/niamey_niger/niamey_worldpop_2020_100m_arcgis.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/niamey_niger/osm_health_facilities_niamey.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/niamey_niger/osm_major_roads_niamey.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/niamey_niger/osm_schools_waterpoints_niamey.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/niamey_niger/osm_urban_landuse_niamey.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/niamey_niger/osm_water_surface_niamey.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/niamey_niger/osm_waterways_niamey.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/niamey_niger/gbif_freshwater_snails_niamey_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/niamey_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 6.220992,
|
| 78 |
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"sentinel_datetime": "2025-11-10T10:27:36Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 78.6186,
|
| 84 |
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"repair_attempts": 1
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 0.0,
|
| 91 |
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"max": 0.0,
|
| 92 |
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"mean": 0.0,
|
| 93 |
+
"median": 0.0,
|
| 94 |
+
"p90": 0.0
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
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"valid_pixels": 262144,
|
| 101 |
+
"min": 0.1153,
|
| 102 |
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"max": 0.643,
|
| 103 |
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"mean": 0.3066,
|
| 104 |
+
"median": 0.3244,
|
| 105 |
+
"p90": 0.4122
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 0,
|
| 122 |
+
"major_roads": 21,
|
| 123 |
+
"schools_waterpoints": 0,
|
| 124 |
+
"urban_landuse": 55,
|
| 125 |
+
"water_surface": 21,
|
| 126 |
+
"waterways": 28
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0038_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "niamey_schistosomiasis_s0038_label_positive_jitter",
|
| 6 |
+
"aoi_id": "niamey_schistosomiasis",
|
| 7 |
+
"split": "test",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Niger",
|
| 11 |
+
"name": "Niamey/Niger River, Niger",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 2.0184762471421096,
|
| 17 |
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"lat": 13.564030420989795
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
13.586513461137763
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/niamey_schistosomiasis/niamey_schistosomiasis_s0038_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "650cdd9a03c3b2d7e7c48ba8a12d924515e84f17274acd648ebd9ef9a7cd7fa6",
|
| 34 |
+
"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0038_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0038_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0038_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0038_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0038_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0038_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0038_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/niamey_niger/niamey_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/niamey_niger/niamey_worldpop_2020_100m_arcgis.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/niamey_niger/osm_health_facilities_niamey.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/niamey_niger/osm_major_roads_niamey.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/niamey_niger/osm_schools_waterpoints_niamey.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/niamey_niger/osm_urban_landuse_niamey.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/niamey_niger/osm_water_surface_niamey.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/niamey_niger/osm_waterways_niamey.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/niamey_niger/gbif_freshwater_snails_niamey_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
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},
|
| 70 |
+
"aoi_manifest": "data/manifests/niamey_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
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"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 6.220992,
|
| 78 |
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"sentinel_datetime": "2025-11-10T10:27:36Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 71.7698,
|
| 84 |
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"repair_attempts": 1
|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": 0.0,
|
| 91 |
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"max": 0.0,
|
| 92 |
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"mean": 0.0,
|
| 93 |
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"median": 0.0,
|
| 94 |
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"p90": 0.0
|
| 95 |
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},
|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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"valid_pixels": 0
|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 230344,
|
| 101 |
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"min": 1.3472,
|
| 102 |
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|
| 103 |
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|
| 104 |
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"median": 12.2389,
|
| 105 |
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"p90": 20.0878
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
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"osm_counts": {
|
| 121 |
+
"health_facilities": 3,
|
| 122 |
+
"major_roads": 704,
|
| 123 |
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"schools_waterpoints": 23,
|
| 124 |
+
"urban_landuse": 3129,
|
| 125 |
+
"water_surface": 26,
|
| 126 |
+
"waterways": 48
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0040_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "niamey_schistosomiasis_s0040_label_positive_jitter",
|
| 6 |
+
"aoi_id": "niamey_schistosomiasis",
|
| 7 |
+
"split": "test",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Niger",
|
| 11 |
+
"name": "Niamey/Niger River, Niger",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 2.1858432516806454,
|
| 17 |
+
"lat": 13.40420150682545
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
2.1627305969665436,
|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
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|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/niamey_schistosomiasis/niamey_schistosomiasis_s0040_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "407116bd3a5724eeba6d26952c9aa1751e09fbc04ee058c7827ad2828c3e645f",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0040_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0040_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0040_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0040_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0040_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0040_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0040_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/niamey_niger/niamey_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/niamey_niger/niamey_worldpop_2020_100m_arcgis.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/niamey_niger/osm_health_facilities_niamey.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/niamey_niger/osm_major_roads_niamey.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/niamey_niger/osm_schools_waterpoints_niamey.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/niamey_niger/osm_urban_landuse_niamey.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/niamey_niger/osm_water_surface_niamey.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/niamey_niger/osm_waterways_niamey.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/niamey_niger/gbif_freshwater_snails_niamey_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/niamey_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 6.220992,
|
| 78 |
+
"sentinel_datetime": "2025-11-10T10:27:36Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 50.253,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 0.0,
|
| 91 |
+
"max": 0.0,
|
| 92 |
+
"mean": 0.0,
|
| 93 |
+
"median": 0.0,
|
| 94 |
+
"p90": 0.0
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 207347,
|
| 101 |
+
"min": 0.8782,
|
| 102 |
+
"max": 21.2452,
|
| 103 |
+
"mean": 3.1367,
|
| 104 |
+
"median": 2.0307,
|
| 105 |
+
"p90": 2.5951
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 0,
|
| 122 |
+
"major_roads": 202,
|
| 123 |
+
"schools_waterpoints": 0,
|
| 124 |
+
"urban_landuse": 3865,
|
| 125 |
+
"water_surface": 53,
|
| 126 |
+
"waterways": 3
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 514,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0043_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "niamey_schistosomiasis_s0043_label_positive_jitter",
|
| 6 |
+
"aoi_id": "niamey_schistosomiasis",
|
| 7 |
+
"split": "test",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Niger",
|
| 11 |
+
"name": "Niamey/Niger River, Niger",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 1.963602241066271,
|
| 17 |
+
"lat": 13.500420213209246
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
1.9404803002654452,
|
| 21 |
+
13.477937173061278,
|
| 22 |
+
1.9867241818670969,
|
| 23 |
+
13.522903253357214
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/niamey_schistosomiasis/niamey_schistosomiasis_s0043_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "c8bafc1a71f9e45014fade6d2a37d1dd6b98d2365503df7a86d0ad4fa621425d",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0043_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0043_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0043_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0043_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0043_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0043_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0043_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/niamey_niger/niamey_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/niamey_niger/niamey_worldpop_2020_100m_arcgis.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/niamey_niger/osm_health_facilities_niamey.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/niamey_niger/osm_major_roads_niamey.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/niamey_niger/osm_schools_waterpoints_niamey.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/niamey_niger/osm_urban_landuse_niamey.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/niamey_niger/osm_water_surface_niamey.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/niamey_niger/osm_waterways_niamey.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/niamey_niger/gbif_freshwater_snails_niamey_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/niamey_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 6.220992,
|
| 78 |
+
"sentinel_datetime": "2025-11-10T10:27:36Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 80.0948,
|
| 84 |
+
"repair_attempts": 2
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 0.0,
|
| 91 |
+
"max": 0.0,
|
| 92 |
+
"mean": 0.0,
|
| 93 |
+
"median": 0.0,
|
| 94 |
+
"p90": 0.0
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 210754,
|
| 101 |
+
"min": 0.0702,
|
| 102 |
+
"max": 0.3525,
|
| 103 |
+
"mean": 0.1553,
|
| 104 |
+
"median": 0.1418,
|
| 105 |
+
"p90": 0.2489
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 0,
|
| 122 |
+
"major_roads": 6,
|
| 123 |
+
"schools_waterpoints": 0,
|
| 124 |
+
"urban_landuse": 21,
|
| 125 |
+
"water_surface": 26,
|
| 126 |
+
"waterways": 32
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0046_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "niamey_schistosomiasis_s0046_label_positive_jitter",
|
| 6 |
+
"aoi_id": "niamey_schistosomiasis",
|
| 7 |
+
"split": "test",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Niger",
|
| 11 |
+
"name": "Niamey/Niger River, Niger",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 2.1829217507371306,
|
| 17 |
+
"lat": 13.397232626335262
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
2.159809765770456,
|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
13.41971566648323
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/niamey_schistosomiasis/niamey_schistosomiasis_s0046_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "277aff8cb7952f5f5ac53505d084d3ea48087563068af98233d2692da9eee540",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0046_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0046_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0046_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0046_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0046_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0046_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0046_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/niamey_niger/niamey_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/niamey_niger/niamey_worldpop_2020_100m_arcgis.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/niamey_niger/osm_health_facilities_niamey.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/niamey_niger/osm_major_roads_niamey.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/niamey_niger/osm_schools_waterpoints_niamey.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/niamey_niger/osm_urban_landuse_niamey.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/niamey_niger/osm_water_surface_niamey.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/niamey_niger/osm_waterways_niamey.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/niamey_niger/gbif_freshwater_snails_niamey_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/niamey_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 6.220992,
|
| 78 |
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"sentinel_datetime": "2025-11-10T10:27:36Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 53.4203,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": 0.0,
|
| 91 |
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"max": 0.0,
|
| 92 |
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"mean": 0.0,
|
| 93 |
+
"median": 0.0,
|
| 94 |
+
"p90": 0.0
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 195954,
|
| 101 |
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"min": 1.1583,
|
| 102 |
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"max": 21.2677,
|
| 103 |
+
"mean": 2.337,
|
| 104 |
+
"median": 2.0469,
|
| 105 |
+
"p90": 2.2898
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 0,
|
| 122 |
+
"major_roads": 167,
|
| 123 |
+
"schools_waterpoints": 0,
|
| 124 |
+
"urban_landuse": 2811,
|
| 125 |
+
"water_surface": 34,
|
| 126 |
+
"waterways": 2
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 514,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0048_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
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|
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|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "niamey_schistosomiasis_s0048_label_positive_jitter",
|
| 6 |
+
"aoi_id": "niamey_schistosomiasis",
|
| 7 |
+
"split": "test",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Niger",
|
| 11 |
+
"name": "Niamey/Niger River, Niger",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 2.151278148683198,
|
| 17 |
+
"lat": 13.573007455233313
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
2.128149154354323,
|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
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|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/niamey_schistosomiasis/niamey_schistosomiasis_s0048_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "76370552e1ec75e06a878bcd238c67e1d8eeaaadf58dc556f58c622fad8839d5",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0048_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0048_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0048_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0048_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0048_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0048_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0048_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/niamey_niger/niamey_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/niamey_niger/niamey_worldpop_2020_100m_arcgis.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/niamey_niger/osm_health_facilities_niamey.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/niamey_niger/osm_major_roads_niamey.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/niamey_niger/osm_schools_waterpoints_niamey.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/niamey_niger/osm_urban_landuse_niamey.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/niamey_niger/osm_water_surface_niamey.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/niamey_niger/osm_waterways_niamey.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/niamey_niger/gbif_freshwater_snails_niamey_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/niamey_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 6.220992,
|
| 78 |
+
"sentinel_datetime": "2025-11-10T10:27:36Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 73.2405,
|
| 84 |
+
"repair_attempts": 1
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 0.0,
|
| 91 |
+
"max": 0.0,
|
| 92 |
+
"mean": 0.0,
|
| 93 |
+
"median": 0.0,
|
| 94 |
+
"p90": 0.0
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 262144,
|
| 101 |
+
"min": 0.6178,
|
| 102 |
+
"max": 23.3106,
|
| 103 |
+
"mean": 11.3137,
|
| 104 |
+
"median": 10.9782,
|
| 105 |
+
"p90": 19.9777
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 8,
|
| 122 |
+
"major_roads": 718,
|
| 123 |
+
"schools_waterpoints": 29,
|
| 124 |
+
"urban_landuse": 8404,
|
| 125 |
+
"water_surface": 16,
|
| 126 |
+
"waterways": 60
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0051_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "niamey_schistosomiasis_s0051_label_positive_jitter",
|
| 6 |
+
"aoi_id": "niamey_schistosomiasis",
|
| 7 |
+
"split": "test",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Niger",
|
| 11 |
+
"name": "Niamey/Niger River, Niger",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 2.189823292469812,
|
| 17 |
+
"lat": 13.402682976137646
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
2.1667107837272352,
|
| 21 |
+
13.380199935989678,
|
| 22 |
+
2.2129358012123888,
|
| 23 |
+
13.425166016285614
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/niamey_schistosomiasis/niamey_schistosomiasis_s0051_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "bdf9d0993c6a6c6e7d59093f625d1e2880c740df837a077b0241c3b45db0bc32",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0051_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0051_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0051_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0051_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0051_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0051_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0051_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/niamey_niger/niamey_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/niamey_niger/niamey_worldpop_2020_100m_arcgis.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/niamey_niger/osm_health_facilities_niamey.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/niamey_niger/osm_major_roads_niamey.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/niamey_niger/osm_schools_waterpoints_niamey.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/niamey_niger/osm_urban_landuse_niamey.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/niamey_niger/osm_water_surface_niamey.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/niamey_niger/osm_waterways_niamey.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/niamey_niger/gbif_freshwater_snails_niamey_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/niamey_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 6.220992,
|
| 78 |
+
"sentinel_datetime": "2025-11-10T10:27:36Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 42.6565,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 0.0,
|
| 91 |
+
"max": 0.0,
|
| 92 |
+
"mean": 0.0,
|
| 93 |
+
"median": 0.0,
|
| 94 |
+
"p90": 0.0
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 212509,
|
| 101 |
+
"min": 0.927,
|
| 102 |
+
"max": 20.6639,
|
| 103 |
+
"mean": 2.6303,
|
| 104 |
+
"median": 1.9627,
|
| 105 |
+
"p90": 2.3258
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 0,
|
| 122 |
+
"major_roads": 188,
|
| 123 |
+
"schools_waterpoints": 0,
|
| 124 |
+
"urban_landuse": 3540,
|
| 125 |
+
"water_surface": 54,
|
| 126 |
+
"waterways": 4
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 514,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0052_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "niamey_schistosomiasis_s0052_label_positive_jitter",
|
| 6 |
+
"aoi_id": "niamey_schistosomiasis",
|
| 7 |
+
"split": "test",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Niger",
|
| 11 |
+
"name": "Niamey/Niger River, Niger",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 1.9970187173303948,
|
| 17 |
+
"lat": 13.575894579957946
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
13.598377620105914
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/niamey_schistosomiasis/niamey_schistosomiasis_s0052_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "d9c42a98cc215048c71676e1324d0a03368103075e1d65e3cdb255b153a915cf",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0052_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0052_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0052_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0052_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0052_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0052_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0052_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/niamey_niger/niamey_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/niamey_niger/niamey_worldpop_2020_100m_arcgis.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/niamey_niger/osm_health_facilities_niamey.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/niamey_niger/osm_major_roads_niamey.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/niamey_niger/osm_schools_waterpoints_niamey.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/niamey_niger/osm_urban_landuse_niamey.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/niamey_niger/osm_water_surface_niamey.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/niamey_niger/osm_waterways_niamey.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/niamey_niger/gbif_freshwater_snails_niamey_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/niamey_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 6.220992,
|
| 78 |
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"sentinel_datetime": "2025-11-10T10:27:36Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 62.7315,
|
| 84 |
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"repair_attempts": 2
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": 0.0,
|
| 91 |
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"max": 0.0,
|
| 92 |
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"mean": 0.0,
|
| 93 |
+
"median": 0.0,
|
| 94 |
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"p90": 0.0
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 224266,
|
| 101 |
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"min": 0.5518,
|
| 102 |
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"max": 20.0026,
|
| 103 |
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"mean": 2.55,
|
| 104 |
+
"median": 2.0886,
|
| 105 |
+
"p90": 2.7642
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 2,
|
| 122 |
+
"major_roads": 207,
|
| 123 |
+
"schools_waterpoints": 9,
|
| 124 |
+
"urban_landuse": 1073,
|
| 125 |
+
"water_surface": 44,
|
| 126 |
+
"waterways": 61
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0054_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
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|
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|
|
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|
|
|
|
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|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "niamey_schistosomiasis_s0054_label_positive_jitter",
|
| 6 |
+
"aoi_id": "niamey_schistosomiasis",
|
| 7 |
+
"split": "test",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Niger",
|
| 11 |
+
"name": "Niamey/Niger River, Niger",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
+
"lon": 2.0396881772458904,
|
| 17 |
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"lat": 13.364192162118178
|
| 18 |
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},
|
| 19 |
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|
| 20 |
+
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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|
| 25 |
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"panel_order": [
|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
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"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/niamey_schistosomiasis/niamey_schistosomiasis_s0054_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "cc4518b350af007aa3c19925ede02cf5de653f2e22798915a3e09ba0fe03a634",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0054_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0054_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
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"sentinel_false_color": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0054_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0054_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0054_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0054_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0054_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/niamey_niger/niamey_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/niamey_niger/niamey_worldpop_2020_100m_arcgis.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/niamey_niger/osm_health_facilities_niamey.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/niamey_niger/osm_major_roads_niamey.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/niamey_niger/osm_schools_waterpoints_niamey.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/niamey_niger/osm_urban_landuse_niamey.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/niamey_niger/osm_water_surface_niamey.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/niamey_niger/osm_waterways_niamey.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/niamey_niger/gbif_freshwater_snails_niamey_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/niamey_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
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"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 6.220992,
|
| 78 |
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"sentinel_datetime": "2025-11-10T10:27:36Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 82.4284,
|
| 84 |
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|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": 0.0,
|
| 91 |
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"max": 0.0,
|
| 92 |
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"mean": 0.0,
|
| 93 |
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"median": 0.0,
|
| 94 |
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"p90": 0.0
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 214016,
|
| 101 |
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"min": 0.0662,
|
| 102 |
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"max": 0.2728,
|
| 103 |
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"mean": 0.106,
|
| 104 |
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"median": 0.1017,
|
| 105 |
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"p90": 0.1307
|
| 106 |
+
},
|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
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},
|
| 120 |
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"osm_counts": {
|
| 121 |
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"health_facilities": 0,
|
| 122 |
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"major_roads": 1,
|
| 123 |
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"schools_waterpoints": 0,
|
| 124 |
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|
| 125 |
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"water_surface": 2,
|
| 126 |
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"waterways": 0
|
| 127 |
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},
|
| 128 |
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"label_counts": {
|
| 129 |
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"vector_label": 0,
|
| 130 |
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"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 0,
|
| 132 |
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"disease_aggregate": 0
|
| 133 |
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}
|
| 134 |
+
},
|
| 135 |
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"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
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},
|
| 139 |
+
"license_flags": {
|
| 140 |
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"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
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},
|
| 145 |
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"sampling": {
|
| 146 |
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"sample_type": "label_positive_jitter",
|
| 147 |
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"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0055_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "niamey_schistosomiasis_s0055_label_positive_jitter",
|
| 6 |
+
"aoi_id": "niamey_schistosomiasis",
|
| 7 |
+
"split": "test",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Niger",
|
| 11 |
+
"name": "Niamey/Niger River, Niger",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
+
"lon": 2.033696939942631,
|
| 17 |
+
"lat": 13.371962768930624
|
| 18 |
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},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
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|
| 23 |
+
13.394445809078592
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/niamey_schistosomiasis/niamey_schistosomiasis_s0055_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "552c01dbd1a43858a2072abd9070e3e989f8c54cef4ea818c9c0b420e866fa25",
|
| 34 |
+
"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0055_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0055_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0055_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0055_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0055_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0055_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0055_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/niamey_niger/niamey_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/niamey_niger/niamey_worldpop_2020_100m_arcgis.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/niamey_niger/osm_health_facilities_niamey.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/niamey_niger/osm_major_roads_niamey.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/niamey_niger/osm_schools_waterpoints_niamey.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/niamey_niger/osm_urban_landuse_niamey.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/niamey_niger/osm_water_surface_niamey.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/niamey_niger/osm_waterways_niamey.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/niamey_niger/gbif_freshwater_snails_niamey_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/niamey_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 6.220992,
|
| 78 |
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"sentinel_datetime": "2025-11-10T10:27:36Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 81.0719,
|
| 84 |
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"repair_attempts": 1
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
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"min": 0.0,
|
| 91 |
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"max": 0.0,
|
| 92 |
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"mean": 0.0,
|
| 93 |
+
"median": 0.0,
|
| 94 |
+
"p90": 0.0
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 259584,
|
| 101 |
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"min": 0.0682,
|
| 102 |
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"max": 0.3338,
|
| 103 |
+
"mean": 0.1213,
|
| 104 |
+
"median": 0.1038,
|
| 105 |
+
"p90": 0.1839
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
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},
|
| 120 |
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"osm_counts": {
|
| 121 |
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"health_facilities": 0,
|
| 122 |
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"major_roads": 1,
|
| 123 |
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"schools_waterpoints": 0,
|
| 124 |
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"urban_landuse": 0,
|
| 125 |
+
"water_surface": 2,
|
| 126 |
+
"waterways": 1
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
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"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 0,
|
| 132 |
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"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0056_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "niamey_schistosomiasis_s0056_label_positive_jitter",
|
| 6 |
+
"aoi_id": "niamey_schistosomiasis",
|
| 7 |
+
"split": "test",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Niger",
|
| 11 |
+
"name": "Niamey/Niger River, Niger",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 2.185834856034889,
|
| 17 |
+
"lat": 13.399645544708072
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
13.42212858485604
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/niamey_schistosomiasis/niamey_schistosomiasis_s0056_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "4afe95a5ac46eeb07fc310ba464efb362f5e624e96950fa76a086d59fc73ee8c",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0056_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0056_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0056_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0056_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0056_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0056_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0056_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/niamey_niger/niamey_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/niamey_niger/niamey_worldpop_2020_100m_arcgis.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/niamey_niger/osm_health_facilities_niamey.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/niamey_niger/osm_major_roads_niamey.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/niamey_niger/osm_schools_waterpoints_niamey.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/niamey_niger/osm_urban_landuse_niamey.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/niamey_niger/osm_water_surface_niamey.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/niamey_niger/osm_waterways_niamey.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/niamey_niger/gbif_freshwater_snails_niamey_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/niamey_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 6.220992,
|
| 78 |
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"sentinel_datetime": "2025-11-10T10:27:36Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 48.2791,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": 0.0,
|
| 91 |
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"max": 0.0,
|
| 92 |
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"mean": 0.0,
|
| 93 |
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"median": 0.0,
|
| 94 |
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"p90": 0.0
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 201345,
|
| 101 |
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"min": 1.0894,
|
| 102 |
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|
| 103 |
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|
| 104 |
+
"median": 2.0304,
|
| 105 |
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"p90": 2.3036
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 0,
|
| 122 |
+
"major_roads": 175,
|
| 123 |
+
"schools_waterpoints": 0,
|
| 124 |
+
"urban_landuse": 3055,
|
| 125 |
+
"water_surface": 45,
|
| 126 |
+
"waterways": 3
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
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"vector_label": 0,
|
| 130 |
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"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 514,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0059_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "niamey_schistosomiasis_s0059_label_positive_jitter",
|
| 6 |
+
"aoi_id": "niamey_schistosomiasis",
|
| 7 |
+
"split": "test",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Niger",
|
| 11 |
+
"name": "Niamey/Niger River, Niger",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 2.1890653919396534,
|
| 17 |
+
"lat": 13.402152150896091
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
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|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/niamey_schistosomiasis/niamey_schistosomiasis_s0059_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "69a47b1f6a5e10d072c96e5d955b187b26b733812e1a5ea613fbfc25e5171543",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0059_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0059_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0059_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0059_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0059_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0059_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0059_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/niamey_niger/niamey_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/niamey_niger/niamey_worldpop_2020_100m_arcgis.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/niamey_niger/osm_health_facilities_niamey.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/niamey_niger/osm_major_roads_niamey.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/niamey_niger/osm_schools_waterpoints_niamey.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/niamey_niger/osm_urban_landuse_niamey.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/niamey_niger/osm_water_surface_niamey.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/niamey_niger/osm_waterways_niamey.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/niamey_niger/gbif_freshwater_snails_niamey_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/niamey_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 6.220992,
|
| 78 |
+
"sentinel_datetime": "2025-11-10T10:27:36Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 43.2342,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 0.0,
|
| 91 |
+
"max": 0.0,
|
| 92 |
+
"mean": 0.0,
|
| 93 |
+
"median": 0.0,
|
| 94 |
+
"p90": 0.0
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 210259,
|
| 101 |
+
"min": 0.9269,
|
| 102 |
+
"max": 20.6639,
|
| 103 |
+
"mean": 2.5904,
|
| 104 |
+
"median": 1.9815,
|
| 105 |
+
"p90": 2.3198
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 0,
|
| 122 |
+
"major_roads": 185,
|
| 123 |
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"schools_waterpoints": 0,
|
| 124 |
+
"urban_landuse": 3454,
|
| 125 |
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"water_surface": 54,
|
| 126 |
+
"waterways": 4
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 514,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0061_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "niamey_schistosomiasis_s0061_label_positive_jitter",
|
| 6 |
+
"aoi_id": "niamey_schistosomiasis",
|
| 7 |
+
"split": "test",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Niger",
|
| 11 |
+
"name": "Niamey/Niger River, Niger",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 1.9886609580589816,
|
| 17 |
+
"lat": 13.509297019029997
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
13.48681397888203,
|
| 22 |
+
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|
| 23 |
+
13.531780059177965
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/niamey_schistosomiasis/niamey_schistosomiasis_s0061_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "3730a95933e0fb903446131b500e968e79acf148a8c992c8b180e091f2ef376a",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0061_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0061_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0061_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0061_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0061_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0061_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0061_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/niamey_niger/niamey_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/niamey_niger/niamey_worldpop_2020_100m_arcgis.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/niamey_niger/osm_health_facilities_niamey.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/niamey_niger/osm_major_roads_niamey.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/niamey_niger/osm_schools_waterpoints_niamey.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/niamey_niger/osm_urban_landuse_niamey.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/niamey_niger/osm_water_surface_niamey.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/niamey_niger/osm_waterways_niamey.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/niamey_niger/gbif_freshwater_snails_niamey_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/niamey_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 6.220992,
|
| 78 |
+
"sentinel_datetime": "2025-11-10T10:27:36Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 78.9225,
|
| 84 |
+
"repair_attempts": 1
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
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"min": 0.0,
|
| 91 |
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"max": 0.0,
|
| 92 |
+
"mean": 0.0,
|
| 93 |
+
"median": 0.0,
|
| 94 |
+
"p90": 0.0
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 262144,
|
| 101 |
+
"min": 0.0804,
|
| 102 |
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"max": 2.8616,
|
| 103 |
+
"mean": 0.6191,
|
| 104 |
+
"median": 0.2834,
|
| 105 |
+
"p90": 1.8212
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 0,
|
| 122 |
+
"major_roads": 1,
|
| 123 |
+
"schools_waterpoints": 0,
|
| 124 |
+
"urban_landuse": 47,
|
| 125 |
+
"water_surface": 20,
|
| 126 |
+
"waterways": 50
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0064_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "niamey_schistosomiasis_s0064_label_positive_jitter",
|
| 6 |
+
"aoi_id": "niamey_schistosomiasis",
|
| 7 |
+
"split": "test",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Niger",
|
| 11 |
+
"name": "Niamey/Niger River, Niger",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 2.009651357505693,
|
| 17 |
+
"lat": 13.418943312869855
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
13.441426353017823
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/niamey_schistosomiasis/niamey_schistosomiasis_s0064_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "64e820a37f8e6f7d705ad90a1eeebc7a21936462f4ca3e39b64c2eb1af8790c2",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0064_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0064_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0064_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0064_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0064_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0064_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0064_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/niamey_niger/niamey_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/niamey_niger/niamey_worldpop_2020_100m_arcgis.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/niamey_niger/osm_health_facilities_niamey.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/niamey_niger/osm_major_roads_niamey.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/niamey_niger/osm_schools_waterpoints_niamey.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/niamey_niger/osm_urban_landuse_niamey.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/niamey_niger/osm_water_surface_niamey.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/niamey_niger/osm_waterways_niamey.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/niamey_niger/gbif_freshwater_snails_niamey_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/niamey_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 6.220992,
|
| 78 |
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"sentinel_datetime": "2025-11-10T10:27:36Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 80.0736,
|
| 84 |
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"repair_attempts": 1
|
| 85 |
+
},
|
| 86 |
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"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": 0.0,
|
| 91 |
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"max": 0.0,
|
| 92 |
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"mean": 0.0,
|
| 93 |
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"median": 0.0,
|
| 94 |
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"p90": 0.0
|
| 95 |
+
},
|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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"valid_pixels": 0
|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 262144,
|
| 101 |
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"min": 0.1153,
|
| 102 |
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"max": 0.8517,
|
| 103 |
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|
| 104 |
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"median": 0.2951,
|
| 105 |
+
"p90": 0.5896
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 0,
|
| 122 |
+
"major_roads": 34,
|
| 123 |
+
"schools_waterpoints": 0,
|
| 124 |
+
"urban_landuse": 96,
|
| 125 |
+
"water_surface": 31,
|
| 126 |
+
"waterways": 52
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/niamey_schistosomiasis/niamey_schistosomiasis_s0067_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "niamey_schistosomiasis_s0067_label_positive_jitter",
|
| 6 |
+
"aoi_id": "niamey_schistosomiasis",
|
| 7 |
+
"split": "test",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Niger",
|
| 11 |
+
"name": "Niamey/Niger River, Niger",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 2.167502036217649,
|
| 17 |
+
"lat": 13.549220866480203
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
13.571703906628171
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/niamey_schistosomiasis/niamey_schistosomiasis_s0067_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "d213f314f79c46be360f0fdeb0c773592654e2a5e9624dc736bceca6264c25e3",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0067_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0067_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0067_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0067_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0067_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0067_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/niamey_schistosomiasis/niamey_schistosomiasis_s0067_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/niamey_niger/niamey_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/niamey_niger/niamey_worldpop_2020_100m_arcgis.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/niamey_niger/niamey_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/niamey_niger/osm_health_facilities_niamey.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/niamey_niger/osm_major_roads_niamey.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/niamey_niger/osm_schools_waterpoints_niamey.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/niamey_niger/osm_urban_landuse_niamey.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/niamey_niger/osm_water_surface_niamey.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/niamey_niger/osm_waterways_niamey.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/niamey_niger/gbif_freshwater_snails_niamey_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/niamey_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 6.220992,
|
| 78 |
+
"sentinel_datetime": "2025-11-10T10:27:36Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 77.6721,
|
| 84 |
+
"repair_attempts": 1
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 0.0,
|
| 91 |
+
"max": 0.0,
|
| 92 |
+
"mean": 0.0,
|
| 93 |
+
"median": 0.0,
|
| 94 |
+
"p90": 0.0
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 262144,
|
| 101 |
+
"min": 2.8132,
|
| 102 |
+
"max": 24.1614,
|
| 103 |
+
"mean": 13.7528,
|
| 104 |
+
"median": 13.8664,
|
| 105 |
+
"p90": 22.4138
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 4,
|
| 122 |
+
"major_roads": 857,
|
| 123 |
+
"schools_waterpoints": 44,
|
| 124 |
+
"urban_landuse": 6829,
|
| 125 |
+
"water_surface": 4,
|
| 126 |
+
"waterways": 38
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|