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- sidecars/colombo_dengue/colombo_dengue_s0001_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0006_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0007_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0012_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0013_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0014_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0015_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0018_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0019_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0022_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0024_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0025_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0029_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0030_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0031_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0036_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0037_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0040_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0043_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0044_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0045_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0048_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0051_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0056_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0057_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0060_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0061_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0066_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0067_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0072_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0073_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0074_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0075_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0078_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0079_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0081_hard_negative_water_urban_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0082_hard_negative_water_urban_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0087_hard_negative_water_urban_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0088_hard_negative_water_urban_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0091_hard_negative_water_urban_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0092_hard_negative_water_urban_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0094_hard_negative_water_urban_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0097_hard_negative_water_urban_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0098_hard_negative_water_urban_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0100_hard_negative_water_urban_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0103_hard_negative_water_urban_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0106_hard_negative_water_urban_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0109_hard_negative_water_urban_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0110_hard_negative_water_urban_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0113_hard_negative_water_urban_sidecar.json +149 -0
sidecars/colombo_dengue/colombo_dengue_s0001_label_positive_jitter_sidecar.json
ADDED
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| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
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| 5 |
+
"chip_id": "colombo_dengue_s0001_label_positive_jitter",
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| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
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"lon": 79.85919829499142,
|
| 17 |
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"lat": 6.914612276978768
|
| 18 |
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},
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| 19 |
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"bbox": [
|
| 20 |
+
79.83655053019592,
|
| 21 |
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|
| 22 |
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79.88184605978691,
|
| 23 |
+
6.937095317126736
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0001_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "d14de762c17b582d5ec982e9d653628514789fda8fb4aabef288f902cff4c95c",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0001_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0001_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0001_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0001_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0001_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0001_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0001_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
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"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
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"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 101.1677,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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"raster_stats": {
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| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": -5034.6172,
|
| 91 |
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"max": 17.454,
|
| 92 |
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"mean": -875.4221,
|
| 93 |
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"median": -492.3405,
|
| 94 |
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"p90": 16.7999
|
| 95 |
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},
|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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"valid_pixels": 0
|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 211385,
|
| 101 |
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"min": 0.0083,
|
| 102 |
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"max": 628.909,
|
| 103 |
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"mean": 90.1336,
|
| 104 |
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"median": 56.6068,
|
| 105 |
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"p90": 227.7625
|
| 106 |
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},
|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
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"valid_pixels": 0
|
| 109 |
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},
|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
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"valid_pixels": 0
|
| 112 |
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},
|
| 113 |
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"jrc_gsw_transitions": {
|
| 114 |
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"valid_pixels": 0
|
| 115 |
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},
|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
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"valid_pixels": 0
|
| 118 |
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}
|
| 119 |
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},
|
| 120 |
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"osm_counts": {
|
| 121 |
+
"health_facilities": 73,
|
| 122 |
+
"major_roads": 3255,
|
| 123 |
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"schools_waterpoints": 164,
|
| 124 |
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"urban_landuse": 13536,
|
| 125 |
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"water_surface": 41,
|
| 126 |
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"waterways": 20
|
| 127 |
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},
|
| 128 |
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"label_counts": {
|
| 129 |
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"vector_label": 14,
|
| 130 |
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"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 0,
|
| 132 |
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"disease_aggregate": 0
|
| 133 |
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}
|
| 134 |
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},
|
| 135 |
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"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0006_label_positive_jitter_sidecar.json
ADDED
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@@ -0,0 +1,149 @@
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
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"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
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"chip_id": "colombo_dengue_s0006_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 79.86902095094548,
|
| 17 |
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"lat": 6.939549772110529
|
| 18 |
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},
|
| 19 |
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"bbox": [
|
| 20 |
+
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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],
|
| 25 |
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"panel_order": [
|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0006_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "82eaadfa2e70c43b9834af6fcdb65ca7d12156f32687419b4de5eaeac0990dbe",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0006_label_positive_jitter",
|
| 40 |
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"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0006_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
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"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0006_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0006_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0006_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0006_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0006_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
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"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
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"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 98.9175,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": -4219.5684,
|
| 91 |
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"max": 17.6974,
|
| 92 |
+
"mean": -561.3914,
|
| 93 |
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"median": -134.5982,
|
| 94 |
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"p90": 17.3269
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 234322,
|
| 101 |
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"min": 0.0083,
|
| 102 |
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"max": 628.9982,
|
| 103 |
+
"mean": 142.2311,
|
| 104 |
+
"median": 131.0485,
|
| 105 |
+
"p90": 289.2589
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 44,
|
| 122 |
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"major_roads": 2720,
|
| 123 |
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"schools_waterpoints": 123,
|
| 124 |
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"urban_landuse": 15821,
|
| 125 |
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"water_surface": 18,
|
| 126 |
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"waterways": 36
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 14,
|
| 130 |
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"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0007_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0007_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 79.84258628845487,
|
| 17 |
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"lat": 6.9298062009839185
|
| 18 |
+
},
|
| 19 |
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"bbox": [
|
| 20 |
+
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|
| 21 |
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|
| 22 |
+
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|
| 23 |
+
6.952289241131886
|
| 24 |
+
],
|
| 25 |
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"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0007_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "36c6d820d4e4b7486a3a0145cd28311cabf323f47172c5df2c554f333167b1f0",
|
| 34 |
+
"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0007_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0007_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0007_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0007_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0007_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0007_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0007_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 95.697,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": -5899.2012,
|
| 91 |
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"max": 15.5402,
|
| 92 |
+
"mean": -1540.4927,
|
| 93 |
+
"median": -1247.5032,
|
| 94 |
+
"p90": -231.6978
|
| 95 |
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},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 157913,
|
| 101 |
+
"min": 0.0036,
|
| 102 |
+
"max": 620.0544,
|
| 103 |
+
"mean": 80.6575,
|
| 104 |
+
"median": 21.2832,
|
| 105 |
+
"p90": 264.5667
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 23,
|
| 122 |
+
"major_roads": 2032,
|
| 123 |
+
"schools_waterpoints": 69,
|
| 124 |
+
"urban_landuse": 4614,
|
| 125 |
+
"water_surface": 20,
|
| 126 |
+
"waterways": 10
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 4,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0012_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0012_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.91707515385767,
|
| 17 |
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"lat": 6.955819572870445
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
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|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0012_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "cf7860fbd98aceadd8704da4718b44ce26990bd6a04eac5df4f39ce2984c16f1",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0012_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0012_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0012_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0012_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0012_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0012_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0012_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
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"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
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"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 87.4203,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": 17.4378,
|
| 91 |
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"max": 19.5385,
|
| 92 |
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"mean": 18.3124,
|
| 93 |
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"median": 18.2244,
|
| 94 |
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"p90": 18.9784
|
| 95 |
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},
|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 96192,
|
| 101 |
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"min": 0.0882,
|
| 102 |
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"max": 253.5079,
|
| 103 |
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|
| 104 |
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"median": 39.1266,
|
| 105 |
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"p90": 106.3338
|
| 106 |
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},
|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 7,
|
| 122 |
+
"major_roads": 1410,
|
| 123 |
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|
| 124 |
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"urban_landuse": 21221,
|
| 125 |
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"water_surface": 29,
|
| 126 |
+
"waterways": 33
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 1,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0013_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
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|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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|
| 4 |
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"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
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"chip_id": "colombo_dengue_s0013_label_positive_jitter",
|
| 6 |
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"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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"chip_size_km": 5.0,
|
| 14 |
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|
| 15 |
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"center": {
|
| 16 |
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|
| 17 |
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|
| 18 |
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|
| 19 |
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|
| 20 |
+
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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|
| 25 |
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"panel_order": [
|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
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"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0013_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "45181a327b7946453ee09be9c75b2871b083311aae967bfaf335c7a1dc307514",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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|
| 37 |
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"source_assets": {
|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0013_label_positive_jitter",
|
| 40 |
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"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0013_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
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"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0013_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0013_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0013_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0013_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
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"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0013_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
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"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
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"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
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},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
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"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
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"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 93.2757,
|
| 84 |
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|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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|
| 90 |
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"min": -7689.6357,
|
| 91 |
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"max": 14.8941,
|
| 92 |
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"mean": -2240.1631,
|
| 93 |
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"median": -1783.4225,
|
| 94 |
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"p90": -280.6806
|
| 95 |
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},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 133948,
|
| 101 |
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"min": 0.0022,
|
| 102 |
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"max": 635.5265,
|
| 103 |
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"mean": 72.2082,
|
| 104 |
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"median": 9.6317,
|
| 105 |
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"p90": 253.5714
|
| 106 |
+
},
|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
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"osm_counts": {
|
| 121 |
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|
| 122 |
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"major_roads": 1394,
|
| 123 |
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|
| 124 |
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|
| 125 |
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"water_surface": 9,
|
| 126 |
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"waterways": 10
|
| 127 |
+
},
|
| 128 |
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"label_counts": {
|
| 129 |
+
"vector_label": 4,
|
| 130 |
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"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
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"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
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},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0014_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0014_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 79.85187622586318,
|
| 17 |
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"lat": 6.899804338161084
|
| 18 |
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},
|
| 19 |
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"bbox": [
|
| 20 |
+
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
+
],
|
| 25 |
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"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
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"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0014_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "a29ec118d23319de8406e28a33f2c749a98e5e3fb48430dab86828468f6958c8",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0014_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0014_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0014_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0014_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0014_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0014_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0014_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 104.2486,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": -8710.2637,
|
| 91 |
+
"max": 10.7402,
|
| 92 |
+
"mean": -2317.7534,
|
| 93 |
+
"median": -1795.2466,
|
| 94 |
+
"p90": -298.096
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 139769,
|
| 101 |
+
"min": 0.0752,
|
| 102 |
+
"max": 265.2715,
|
| 103 |
+
"mean": 62.8505,
|
| 104 |
+
"median": 51.9254,
|
| 105 |
+
"p90": 136.2968
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 61,
|
| 122 |
+
"major_roads": 2269,
|
| 123 |
+
"schools_waterpoints": 130,
|
| 124 |
+
"urban_landuse": 7809,
|
| 125 |
+
"water_surface": 23,
|
| 126 |
+
"waterways": 9
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 12,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0015_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0015_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.86908508126906,
|
| 17 |
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"lat": 6.939342693614255
|
| 18 |
+
},
|
| 19 |
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"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
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|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0015_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "b29451d84d2bbac5d774d3f22f05368869656fd39884463734491dd45c34ab73",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0015_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0015_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0015_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0015_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0015_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0015_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0015_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
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"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 98.9969,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": -4186.4033,
|
| 91 |
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"max": 17.696,
|
| 92 |
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"mean": -554.0038,
|
| 93 |
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"median": -131.9038,
|
| 94 |
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"p90": 17.3254
|
| 95 |
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},
|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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"valid_pixels": 0
|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 234939,
|
| 101 |
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"min": 0.0083,
|
| 102 |
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"max": 645.0306,
|
| 103 |
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|
| 104 |
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"median": 130.6873,
|
| 105 |
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"p90": 288.5714
|
| 106 |
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},
|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
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"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
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},
|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 45,
|
| 122 |
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"major_roads": 2737,
|
| 123 |
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"schools_waterpoints": 125,
|
| 124 |
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"urban_landuse": 15840,
|
| 125 |
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"water_surface": 19,
|
| 126 |
+
"waterways": 35
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
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"vector_label": 14,
|
| 130 |
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"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0018_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0018_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 79.8492164809483,
|
| 17 |
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"lat": 6.896545091916142
|
| 18 |
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},
|
| 19 |
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|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
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|
| 23 |
+
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|
| 24 |
+
],
|
| 25 |
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"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0018_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "5fa95cea6e113903dd8c5e74047f8ef60e9a983497dbd251da7e140635fce65e",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0018_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0018_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0018_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0018_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0018_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0018_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0018_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
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"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 105.0353,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
+
"min": -9676.4736,
|
| 91 |
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"max": -60.1682,
|
| 92 |
+
"mean": -2921.9087,
|
| 93 |
+
"median": -2388.1838,
|
| 94 |
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"p90": -627.6321
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 119576,
|
| 101 |
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"min": 0.0752,
|
| 102 |
+
"max": 255.1888,
|
| 103 |
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"mean": 62.5912,
|
| 104 |
+
"median": 50.534,
|
| 105 |
+
"p90": 142.7258
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 53,
|
| 122 |
+
"major_roads": 1915,
|
| 123 |
+
"schools_waterpoints": 121,
|
| 124 |
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"urban_landuse": 7032,
|
| 125 |
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"water_surface": 21,
|
| 126 |
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"waterways": 4
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 6,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0019_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0019_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.85273874892432,
|
| 17 |
+
"lat": 6.9216301035922765
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
6.944113143740244
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0019_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "c06c2255ff575db97f8a8a156d16b6a17ba93652aa2ba67db937190233f906af",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0019_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0019_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0019_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0019_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0019_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0019_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0019_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 101.592,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": -4622.9009,
|
| 91 |
+
"max": 17.1282,
|
| 92 |
+
"mean": -1008.9135,
|
| 93 |
+
"median": -733.5372,
|
| 94 |
+
"p90": -58.6046
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 197225,
|
| 101 |
+
"min": 0.0036,
|
| 102 |
+
"max": 631.5757,
|
| 103 |
+
"mean": 93.6289,
|
| 104 |
+
"median": 42.0068,
|
| 105 |
+
"p90": 274.4008
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 50,
|
| 122 |
+
"major_roads": 2841,
|
| 123 |
+
"schools_waterpoints": 142,
|
| 124 |
+
"urban_landuse": 8906,
|
| 125 |
+
"water_surface": 31,
|
| 126 |
+
"waterways": 12
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 19,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0022_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0022_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.85314088819106,
|
| 17 |
+
"lat": 6.876646767094564
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
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|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0022_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "0e72af108cc98aa0c5d697ae2fad04b7ff253cdb3978e38ba9ba400bae7a1814",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0022_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0022_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0022_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0022_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0022_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0022_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0022_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
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"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 104.9347,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": -8890.0889,
|
| 91 |
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"max": 18.0635,
|
| 92 |
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"mean": -3796.3569,
|
| 93 |
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"median": -3644.3545,
|
| 94 |
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"p90": -612.8927
|
| 95 |
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},
|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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"valid_pixels": 0
|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 115326,
|
| 101 |
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"min": 0.0752,
|
| 102 |
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"max": 363.8871,
|
| 103 |
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|
| 104 |
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"median": 99.5896,
|
| 105 |
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"p90": 174.0993
|
| 106 |
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},
|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 41,
|
| 122 |
+
"major_roads": 1468,
|
| 123 |
+
"schools_waterpoints": 77,
|
| 124 |
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"urban_landuse": 14030,
|
| 125 |
+
"water_surface": 5,
|
| 126 |
+
"waterways": 5
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 1,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0024_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
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"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0024_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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|
| 17 |
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"lat": 6.843702058328903
|
| 18 |
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|
| 19 |
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"bbox": [
|
| 20 |
+
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|
| 21 |
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|
| 22 |
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|
| 23 |
+
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|
| 24 |
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|
| 25 |
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"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0024_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "74957d2eea8696f8a1d7396236a889fb6d6ea34aa58aa09508713948bcede42d",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0024_label_positive_jitter",
|
| 40 |
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"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0024_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
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"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0024_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0024_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0024_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0024_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0024_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
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"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 104.3957,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
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},
|
| 86 |
+
"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": 19.3657,
|
| 91 |
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"max": 23.8489,
|
| 92 |
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"mean": 21.7678,
|
| 93 |
+
"median": 21.7593,
|
| 94 |
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"p90": 23.1869
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 262144,
|
| 101 |
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"min": 0.6656,
|
| 102 |
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"max": 166.1497,
|
| 103 |
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"mean": 31.4631,
|
| 104 |
+
"median": 28.1712,
|
| 105 |
+
"p90": 56.0044
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
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"health_facilities": 10,
|
| 122 |
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"major_roads": 1427,
|
| 123 |
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"schools_waterpoints": 15,
|
| 124 |
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|
| 125 |
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"water_surface": 1,
|
| 126 |
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"waterways": 17
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 1,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
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"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
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},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0025_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0025_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 79.8607218260783,
|
| 17 |
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"lat": 6.900474141942715
|
| 18 |
+
},
|
| 19 |
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"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
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|
| 23 |
+
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|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
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"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
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"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0025_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "2a7d39698e83c73bb751968131951582d7a6716e255d409b7c72ddceddecd303",
|
| 34 |
+
"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0025_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0025_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0025_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0025_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0025_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0025_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0025_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 102.6026,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": -6923.0708,
|
| 91 |
+
"max": 17.7672,
|
| 92 |
+
"mean": -1462.3195,
|
| 93 |
+
"median": -950.2625,
|
| 94 |
+
"p90": 17.1728
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 191969,
|
| 101 |
+
"min": 0.0752,
|
| 102 |
+
"max": 273.4312,
|
| 103 |
+
"mean": 70.193,
|
| 104 |
+
"median": 58.8313,
|
| 105 |
+
"p90": 144.6481
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 85,
|
| 122 |
+
"major_roads": 2969,
|
| 123 |
+
"schools_waterpoints": 159,
|
| 124 |
+
"urban_landuse": 13127,
|
| 125 |
+
"water_surface": 35,
|
| 126 |
+
"waterways": 13
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 12,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0029_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0029_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.86233175230251,
|
| 17 |
+
"lat": 6.923851614852123
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
79.8849799602998,
|
| 23 |
+
6.946334655000091
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0029_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "576b9c473272ac84c4072fd08c0410b6cc99bc006f81d16936515f20ef68965c",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0029_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0029_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0029_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0029_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0029_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0029_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0029_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 103.5909,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": -3316.9617,
|
| 91 |
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"max": 17.356,
|
| 92 |
+
"mean": -605.2157,
|
| 93 |
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"median": -342.3897,
|
| 94 |
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"p90": 16.9658
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
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"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 236581,
|
| 101 |
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"min": 0.0083,
|
| 102 |
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"max": 622.1975,
|
| 103 |
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"mean": 114.2,
|
| 104 |
+
"median": 70.072,
|
| 105 |
+
"p90": 278.2407
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 62,
|
| 122 |
+
"major_roads": 3393,
|
| 123 |
+
"schools_waterpoints": 155,
|
| 124 |
+
"urban_landuse": 13839,
|
| 125 |
+
"water_surface": 43,
|
| 126 |
+
"waterways": 22
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 16,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0030_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
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|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
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"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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|
| 4 |
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|
| 5 |
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"chip_id": "colombo_dengue_s0030_label_positive_jitter",
|
| 6 |
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|
| 7 |
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"split": "validation",
|
| 8 |
+
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|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
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"country": "Sri Lanka",
|
| 11 |
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"name": "Colombo District, Sri Lanka",
|
| 12 |
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"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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|
| 14 |
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|
| 15 |
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|
| 16 |
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|
| 17 |
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|
| 18 |
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|
| 19 |
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|
| 20 |
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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|
| 25 |
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|
| 26 |
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|
| 27 |
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|
| 28 |
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"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
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"path": "image_packets/colombo_dengue/colombo_dengue_s0030_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "b15d54c4bb99bdf0e416f391a76d3578282392bbfd89a431eef25e8d7f52cd6e",
|
| 34 |
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|
| 35 |
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|
| 36 |
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|
| 37 |
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|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0030_label_positive_jitter",
|
| 40 |
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|
| 41 |
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"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0030_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0030_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0030_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0030_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
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"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0030_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
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"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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|
| 49 |
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"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
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"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
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},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
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"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
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"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 98.1646,
|
| 84 |
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|
| 85 |
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|
| 86 |
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|
| 87 |
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|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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|
| 90 |
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|
| 91 |
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"max": 15.571,
|
| 92 |
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"mean": -2378.3752,
|
| 93 |
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"median": -1867.355,
|
| 94 |
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"p90": -259.2844
|
| 95 |
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},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
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"valid_pixels": 0
|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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|
| 101 |
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"min": 0.0022,
|
| 102 |
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|
| 103 |
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|
| 104 |
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"median": 43.478,
|
| 105 |
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"p90": 302.9669
|
| 106 |
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|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
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"valid_pixels": 0
|
| 118 |
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}
|
| 119 |
+
},
|
| 120 |
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"osm_counts": {
|
| 121 |
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|
| 122 |
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|
| 123 |
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|
| 124 |
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|
| 125 |
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|
| 126 |
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|
| 127 |
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},
|
| 128 |
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"label_counts": {
|
| 129 |
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"vector_label": 2,
|
| 130 |
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|
| 131 |
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"intermediate_host_label": 0,
|
| 132 |
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"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
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},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
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"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
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"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
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},
|
| 145 |
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"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0031_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0031_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 79.87961499438386,
|
| 17 |
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"lat": 6.938039258714198
|
| 18 |
+
},
|
| 19 |
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"bbox": [
|
| 20 |
+
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|
| 21 |
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|
| 22 |
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|
| 23 |
+
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|
| 24 |
+
],
|
| 25 |
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"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
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"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0031_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "69af34ae3f83cdd7b1768f3d29b7efb55ee40c39df93c5b205385da8d0e86e80",
|
| 34 |
+
"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0031_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0031_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0031_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0031_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0031_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0031_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0031_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 98.078,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
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"min": -2540.5776,
|
| 91 |
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"max": 17.9058,
|
| 92 |
+
"mean": -199.0853,
|
| 93 |
+
"median": 16.9603,
|
| 94 |
+
"p90": 17.6478
|
| 95 |
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},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 243183,
|
| 101 |
+
"min": 0.1015,
|
| 102 |
+
"max": 615.0872,
|
| 103 |
+
"mean": 136.6552,
|
| 104 |
+
"median": 119.9266,
|
| 105 |
+
"p90": 273.7589
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 49,
|
| 122 |
+
"major_roads": 2608,
|
| 123 |
+
"schools_waterpoints": 131,
|
| 124 |
+
"urban_landuse": 19765,
|
| 125 |
+
"water_surface": 17,
|
| 126 |
+
"waterways": 54
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 14,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0036_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0036_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 79.8580296265196,
|
| 17 |
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"lat": 6.90407302205837
|
| 18 |
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},
|
| 19 |
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"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
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|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0036_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "03a17dfeec3faad6a0f0ed75c0f4b5df67fb4f36b8092c85175f269f54cb5a82",
|
| 34 |
+
"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0036_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0036_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0036_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0036_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0036_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0036_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0036_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
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"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 102.3226,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": -6859.1401,
|
| 91 |
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|
| 92 |
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"mean": -1439.8645,
|
| 93 |
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"median": -922.4501,
|
| 94 |
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"p90": 16.7756
|
| 95 |
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},
|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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|
| 101 |
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|
| 102 |
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|
| 103 |
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|
| 104 |
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"median": 58.6945,
|
| 105 |
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"p90": 155.2563
|
| 106 |
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},
|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
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},
|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
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"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
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"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
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},
|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
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"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
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"osm_counts": {
|
| 121 |
+
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|
| 122 |
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|
| 123 |
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|
| 124 |
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|
| 125 |
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"water_surface": 28,
|
| 126 |
+
"waterways": 14
|
| 127 |
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},
|
| 128 |
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"label_counts": {
|
| 129 |
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|
| 130 |
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|
| 131 |
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"intermediate_host_label": 0,
|
| 132 |
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"disease_aggregate": 0
|
| 133 |
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}
|
| 134 |
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},
|
| 135 |
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"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0037_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
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"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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|
| 4 |
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|
| 5 |
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|
| 6 |
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|
| 7 |
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"split": "validation",
|
| 8 |
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"disease_module": "dengue_aedes",
|
| 9 |
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|
| 10 |
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"country": "Sri Lanka",
|
| 11 |
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"name": "Colombo District, Sri Lanka",
|
| 12 |
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"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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|
| 14 |
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|
| 15 |
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|
| 16 |
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| 17 |
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|
| 18 |
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| 19 |
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|
| 20 |
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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|
| 25 |
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|
| 26 |
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|
| 27 |
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|
| 28 |
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"bottom_left: Mapbox satellite context",
|
| 29 |
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"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
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"path": "image_packets/colombo_dengue/colombo_dengue_s0037_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "cba5ac870475ef50aa03c42b25c8b1c72898af34205c897c7d272ad38900d9d4",
|
| 34 |
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|
| 35 |
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|
| 36 |
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|
| 37 |
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|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
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"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0037_label_positive_jitter",
|
| 40 |
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|
| 41 |
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|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0037_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0037_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0037_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
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"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0037_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
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"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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|
| 49 |
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"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
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"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
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"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
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"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 104.1496,
|
| 84 |
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|
| 85 |
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|
| 86 |
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|
| 87 |
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"raster_stats": {
|
| 88 |
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|
| 89 |
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|
| 90 |
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|
| 91 |
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|
| 92 |
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"mean": -4038.9429,
|
| 93 |
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"median": -3707.4556,
|
| 94 |
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"p90": -1085.1472
|
| 95 |
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},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
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|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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|
| 101 |
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"min": 0.0752,
|
| 102 |
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|
| 103 |
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|
| 104 |
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"median": 70.2715,
|
| 105 |
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"p90": 178.2166
|
| 106 |
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|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
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},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
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"valid_pixels": 0
|
| 118 |
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}
|
| 119 |
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},
|
| 120 |
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|
| 121 |
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|
| 122 |
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|
| 123 |
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|
| 124 |
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|
| 125 |
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|
| 126 |
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|
| 127 |
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},
|
| 128 |
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"label_counts": {
|
| 129 |
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"vector_label": 5,
|
| 130 |
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|
| 131 |
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"intermediate_host_label": 0,
|
| 132 |
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"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
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"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
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"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
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},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0040_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0040_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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|
| 17 |
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|
| 18 |
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},
|
| 19 |
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"bbox": [
|
| 20 |
+
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
+
],
|
| 25 |
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"panel_order": [
|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
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"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
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"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0040_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "a163914ceca27ec83c438efb54389c72ce13bb4be74f4e0e62f8b18111796277",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0040_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0040_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0040_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0040_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0040_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0040_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0040_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
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"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 102.419,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": -6950.1597,
|
| 91 |
+
"max": 17.7398,
|
| 92 |
+
"mean": -1475.6224,
|
| 93 |
+
"median": -962.1614,
|
| 94 |
+
"p90": 17.0852
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 188644,
|
| 101 |
+
"min": 0.0752,
|
| 102 |
+
"max": 615.9539,
|
| 103 |
+
"mean": 70.8823,
|
| 104 |
+
"median": 59.2898,
|
| 105 |
+
"p90": 145.6653
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 80,
|
| 122 |
+
"major_roads": 2946,
|
| 123 |
+
"schools_waterpoints": 160,
|
| 124 |
+
"urban_landuse": 12920,
|
| 125 |
+
"water_surface": 33,
|
| 126 |
+
"waterways": 14
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 12,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0043_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0043_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.86023387068404,
|
| 17 |
+
"lat": 6.902722462662501
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
79.83758667533897,
|
| 21 |
+
6.880239422514533,
|
| 22 |
+
79.88288106602911,
|
| 23 |
+
6.925205502810469
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0043_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "e2537590385418c5c68ec877b224fa6df093dbe95c85f8ccb93d366a30a8e51a",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0043_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0043_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0043_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0043_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0043_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0043_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0043_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 102.4263,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": -6678.3213,
|
| 91 |
+
"max": 17.7154,
|
| 92 |
+
"mean": -1362.5781,
|
| 93 |
+
"median": -844.7764,
|
| 94 |
+
"p90": 17.0787
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 192509,
|
| 101 |
+
"min": 0.0366,
|
| 102 |
+
"max": 643.2798,
|
| 103 |
+
"mean": 72.721,
|
| 104 |
+
"median": 59.0667,
|
| 105 |
+
"p90": 151.5579
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 83,
|
| 122 |
+
"major_roads": 2986,
|
| 123 |
+
"schools_waterpoints": 164,
|
| 124 |
+
"urban_landuse": 13328,
|
| 125 |
+
"water_surface": 36,
|
| 126 |
+
"waterways": 15
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 12,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0044_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
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|
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|
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|
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|
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|
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|
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|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
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|
|
|
|
|
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|
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|
|
|
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|
|
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|
|
|
|
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|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
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|
|
| 1 |
+
{
|
| 2 |
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|
| 3 |
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|
| 4 |
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|
| 5 |
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|
| 6 |
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|
| 7 |
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|
| 8 |
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|
| 9 |
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|
| 10 |
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|
| 11 |
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|
| 12 |
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|
| 13 |
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|
| 14 |
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| 15 |
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|
| 16 |
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| 17 |
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|
| 18 |
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| 19 |
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|
| 20 |
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| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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| 25 |
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|
| 26 |
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|
| 27 |
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|
| 28 |
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|
| 29 |
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|
| 30 |
+
],
|
| 31 |
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"image_packet": {
|
| 32 |
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"path": "image_packets/colombo_dengue/colombo_dengue_s0044_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "373b7d0d7a528cbb9553405cc3427e4dc46df77a490b6555b8c4bc70033395e9",
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| 34 |
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|
| 35 |
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|
| 36 |
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|
| 37 |
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|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
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|
| 40 |
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|
| 41 |
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|
| 42 |
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"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0044_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0044_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
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"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0044_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
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"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0044_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
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|
| 47 |
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|
| 48 |
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|
| 49 |
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"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
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"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
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| 54 |
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"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_vector": [
|
| 66 |
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"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
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}
|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
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"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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|
| 83 |
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|
| 84 |
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|
| 85 |
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|
| 86 |
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|
| 87 |
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|
| 88 |
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|
| 89 |
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|
| 90 |
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|
| 91 |
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|
| 92 |
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"mean": -1894.1084,
|
| 93 |
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"median": -1397.4502,
|
| 94 |
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"p90": 16.8735
|
| 95 |
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},
|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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|
| 101 |
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|
| 102 |
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|
| 103 |
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|
| 104 |
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"median": 58.8242,
|
| 105 |
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|
| 106 |
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|
| 107 |
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|
| 108 |
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|
| 109 |
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},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
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"valid_pixels": 0
|
| 112 |
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},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
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},
|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
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"valid_pixels": 0
|
| 118 |
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}
|
| 119 |
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},
|
| 120 |
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|
| 121 |
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|
| 122 |
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|
| 123 |
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|
| 124 |
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|
| 125 |
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|
| 126 |
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|
| 127 |
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|
| 128 |
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|
| 129 |
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"vector_label": 12,
|
| 130 |
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|
| 131 |
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|
| 132 |
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|
| 133 |
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}
|
| 134 |
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},
|
| 135 |
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"label_quality": {
|
| 136 |
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"tier": "weak_label_positive",
|
| 137 |
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"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
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},
|
| 139 |
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"license_flags": {
|
| 140 |
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"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
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},
|
| 145 |
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"sampling": {
|
| 146 |
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"sample_type": "label_positive_jitter",
|
| 147 |
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"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0045_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0045_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
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"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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|
| 17 |
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|
| 18 |
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|
| 19 |
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|
| 20 |
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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],
|
| 25 |
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"panel_order": [
|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
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|
| 28 |
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"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
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],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0045_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "c44502887418b1eb094531d56bda73f8f293f2c2cbde1ca64998dd8fed94c8b2",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0045_label_positive_jitter",
|
| 40 |
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"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0045_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
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"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0045_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0045_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0045_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0045_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0045_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
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"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
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"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 104.8196,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 19.29,
|
| 91 |
+
"max": 23.8497,
|
| 92 |
+
"mean": 21.6769,
|
| 93 |
+
"median": 21.6583,
|
| 94 |
+
"p90": 23.0874
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 262144,
|
| 101 |
+
"min": 0.6986,
|
| 102 |
+
"max": 169.3045,
|
| 103 |
+
"mean": 33.2834,
|
| 104 |
+
"median": 30.017,
|
| 105 |
+
"p90": 59.4347
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 11,
|
| 122 |
+
"major_roads": 1451,
|
| 123 |
+
"schools_waterpoints": 21,
|
| 124 |
+
"urban_landuse": 8983,
|
| 125 |
+
"water_surface": 1,
|
| 126 |
+
"waterways": 24
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 1,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0048_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0048_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.8742391528925,
|
| 17 |
+
"lat": 6.9344743785846354
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
79.85159043458259,
|
| 21 |
+
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|
| 22 |
+
79.89688787120241,
|
| 23 |
+
6.956957418732603
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0048_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "7ed0db76ad7ec65f34bb06418434b753cabd5e71374e1d9824036b315d9e3b07",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0048_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0048_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0048_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0048_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0048_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0048_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0048_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 100.7403,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
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"min": -2971.0825,
|
| 91 |
+
"max": 17.756,
|
| 92 |
+
"mean": -304.0242,
|
| 93 |
+
"median": 5.3261,
|
| 94 |
+
"p90": 17.4386
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 255348,
|
| 101 |
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"min": 0.0083,
|
| 102 |
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"max": 610.5231,
|
| 103 |
+
"mean": 133.5582,
|
| 104 |
+
"median": 113.4277,
|
| 105 |
+
"p90": 276.64
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 61,
|
| 122 |
+
"major_roads": 2944,
|
| 123 |
+
"schools_waterpoints": 140,
|
| 124 |
+
"urban_landuse": 17070,
|
| 125 |
+
"water_surface": 26,
|
| 126 |
+
"waterways": 36
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 14,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0051_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0051_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.8395569760896,
|
| 17 |
+
"lat": 6.931136276426448
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
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|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0051_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "b3713d5d0a824b390f9f18bc47d7459f4cad3584b72cb8a169fd09ce7887d1de",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0051_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0051_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0051_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0051_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0051_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0051_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0051_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 93.3692,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": -6398.8418,
|
| 91 |
+
"max": 14.5984,
|
| 92 |
+
"mean": -1773.9844,
|
| 93 |
+
"median": -1470.1632,
|
| 94 |
+
"p90": -279.9518
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 140027,
|
| 101 |
+
"min": 0.0036,
|
| 102 |
+
"max": 626.5704,
|
| 103 |
+
"mean": 69.5812,
|
| 104 |
+
"median": 12.3495,
|
| 105 |
+
"p90": 244.4694
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 19,
|
| 122 |
+
"major_roads": 1651,
|
| 123 |
+
"schools_waterpoints": 42,
|
| 124 |
+
"urban_landuse": 4027,
|
| 125 |
+
"water_surface": 13,
|
| 126 |
+
"waterways": 10
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 4,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0056_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0056_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.8525348658394,
|
| 17 |
+
"lat": 6.929298665420814
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
79.87518333541034,
|
| 23 |
+
6.951781705568782
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0056_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "2594c94b4cec30e79214344b588fb83d92cd75c38d3d301bca9a1caea535cbf8",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0056_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0056_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0056_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0056_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0056_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0056_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0056_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 100.6642,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": -4811.9541,
|
| 91 |
+
"max": 17.115,
|
| 92 |
+
"mean": -1032.5261,
|
| 93 |
+
"median": -745.7598,
|
| 94 |
+
"p90": -63.3592
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 202109,
|
| 101 |
+
"min": 0.0036,
|
| 102 |
+
"max": 630.5356,
|
| 103 |
+
"mean": 107.0989,
|
| 104 |
+
"median": 56.7649,
|
| 105 |
+
"p90": 291.1687
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 45,
|
| 122 |
+
"major_roads": 2701,
|
| 123 |
+
"schools_waterpoints": 124,
|
| 124 |
+
"urban_landuse": 7912,
|
| 125 |
+
"water_surface": 22,
|
| 126 |
+
"waterways": 12
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 15,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0057_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0057_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.87175362778686,
|
| 17 |
+
"lat": 6.919335496371922
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
79.849105636499,
|
| 21 |
+
6.896852456223954,
|
| 22 |
+
79.89440161907471,
|
| 23 |
+
6.9418185365198894
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0057_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "d48fbf76ad692b8b4a14aa1199227547fbeb43f3e9cce7f84347c080818dc2ea",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0057_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0057_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0057_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0057_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0057_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0057_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0057_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 104.6925,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
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"min": -2894.134,
|
| 91 |
+
"max": 17.6901,
|
| 92 |
+
"mean": -337.7873,
|
| 93 |
+
"median": -47.6467,
|
| 94 |
+
"p90": 17.3355
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 260403,
|
| 101 |
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"min": 0.0083,
|
| 102 |
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"max": 637.4797,
|
| 103 |
+
"mean": 104.2043,
|
| 104 |
+
"median": 67.2638,
|
| 105 |
+
"p90": 247.888
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 73,
|
| 122 |
+
"major_roads": 3538,
|
| 123 |
+
"schools_waterpoints": 167,
|
| 124 |
+
"urban_landuse": 16639,
|
| 125 |
+
"water_surface": 47,
|
| 126 |
+
"waterways": 46
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 18,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0060_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
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|
|
|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0060_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
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"lon": 79.82992933675052,
|
| 17 |
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"lat": 6.929326540344346
|
| 18 |
+
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|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
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|
| 24 |
+
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|
| 25 |
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"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0060_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "68f8d739e0fbefe2c541a036e83cc1c7808f47cab9f7c3331a40117b4b2be827",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0060_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0060_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0060_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0060_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0060_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0060_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0060_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 87.034,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": -6990.7866,
|
| 91 |
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"max": 14.3625,
|
| 92 |
+
"mean": -2459.6692,
|
| 93 |
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"median": -2249.9136,
|
| 94 |
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"p90": -477.3202
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 85335,
|
| 101 |
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"min": 0.0036,
|
| 102 |
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"max": 629.2831,
|
| 103 |
+
"mean": 29.1549,
|
| 104 |
+
"median": 2.0998,
|
| 105 |
+
"p90": 107.8461
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
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"health_facilities": 6,
|
| 122 |
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"major_roads": 842,
|
| 123 |
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"schools_waterpoints": 12,
|
| 124 |
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"urban_landuse": 2522,
|
| 125 |
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"water_surface": 7,
|
| 126 |
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"waterways": 6
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 2,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0061_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0061_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 79.86307322612093,
|
| 17 |
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"lat": 6.920555711273623
|
| 18 |
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},
|
| 19 |
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"bbox": [
|
| 20 |
+
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|
| 21 |
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|
| 22 |
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|
| 23 |
+
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|
| 24 |
+
],
|
| 25 |
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"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0061_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "e7a99626a001b89f13a492ddd7ec3411dc26f15e9e2608d91cfed0f415bdd871",
|
| 34 |
+
"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0061_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0061_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0061_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0061_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0061_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0061_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0061_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 103.5058,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": -3702.8062,
|
| 91 |
+
"max": 17.4375,
|
| 92 |
+
"mean": -601.0261,
|
| 93 |
+
"median": -318.1996,
|
| 94 |
+
"p90": 17.0016
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 236614,
|
| 101 |
+
"min": 0.0083,
|
| 102 |
+
"max": 645.0954,
|
| 103 |
+
"mean": 104.6296,
|
| 104 |
+
"median": 62.2009,
|
| 105 |
+
"p90": 263.4346
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 65,
|
| 122 |
+
"major_roads": 3414,
|
| 123 |
+
"schools_waterpoints": 158,
|
| 124 |
+
"urban_landuse": 14381,
|
| 125 |
+
"water_surface": 44,
|
| 126 |
+
"waterways": 27
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 18,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0066_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0066_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.87351624911435,
|
| 17 |
+
"lat": 6.9196736818707265
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
79.89616425662528,
|
| 23 |
+
6.942156722018694
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0066_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "359b4615c8c0adc56a4fb59d8bb2fd9109b5e6f3708477b3a95bd1a395998b0b",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0066_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0066_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0066_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0066_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0066_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0066_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0066_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 104.7189,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": -2663.0212,
|
| 91 |
+
"max": 17.7331,
|
| 92 |
+
"mean": -288.9919,
|
| 93 |
+
"median": -8.0279,
|
| 94 |
+
"p90": 17.3975
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 261649,
|
| 101 |
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"min": 0.0083,
|
| 102 |
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"max": 527.9026,
|
| 103 |
+
"mean": 104.8958,
|
| 104 |
+
"median": 68.6384,
|
| 105 |
+
"p90": 248.0019
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 75,
|
| 122 |
+
"major_roads": 3448,
|
| 123 |
+
"schools_waterpoints": 166,
|
| 124 |
+
"urban_landuse": 16369,
|
| 125 |
+
"water_surface": 50,
|
| 126 |
+
"waterways": 50
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 18,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0067_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
|
|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0067_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.83355852541749,
|
| 17 |
+
"lat": 6.921735769538121
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
79.8109104189687,
|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
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|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0067_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "fb33682a06f232d63f8708af333b6dc497d0a4d661f5b248c49c8795dc79550e",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0067_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0067_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0067_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0067_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0067_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0067_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0067_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 91.6731,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": -6499.8008,
|
| 91 |
+
"max": 13.9714,
|
| 92 |
+
"mean": -2127.2305,
|
| 93 |
+
"median": -1903.2273,
|
| 94 |
+
"p90": -392.3556
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 98510,
|
| 101 |
+
"min": 0.004,
|
| 102 |
+
"max": 617.61,
|
| 103 |
+
"mean": 45.7065,
|
| 104 |
+
"median": 7.5795,
|
| 105 |
+
"p90": 142.9574
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 16,
|
| 122 |
+
"major_roads": 1180,
|
| 123 |
+
"schools_waterpoints": 27,
|
| 124 |
+
"urban_landuse": 3660,
|
| 125 |
+
"water_surface": 9,
|
| 126 |
+
"waterways": 10
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 2,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0072_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0072_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.87522622731335,
|
| 17 |
+
"lat": 6.922983120711023
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
79.89787439362402,
|
| 23 |
+
6.945466160858991
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0072_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "8ad912f4ea0a842c78086ce19d4fcd6604b5dc5adb374a6aa878afa7e3c769e7",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0072_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0072_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0072_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0072_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0072_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0072_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0072_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 104.9147,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": -2176.1274,
|
| 91 |
+
"max": 17.745,
|
| 92 |
+
"mean": -235.142,
|
| 93 |
+
"median": 16.584,
|
| 94 |
+
"p90": 17.4471
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 261724,
|
| 101 |
+
"min": 0.0207,
|
| 102 |
+
"max": 612.5611,
|
| 103 |
+
"mean": 114.3689,
|
| 104 |
+
"median": 76.349,
|
| 105 |
+
"p90": 266.1686
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 72,
|
| 122 |
+
"major_roads": 3356,
|
| 123 |
+
"schools_waterpoints": 164,
|
| 124 |
+
"urban_landuse": 15990,
|
| 125 |
+
"water_surface": 50,
|
| 126 |
+
"waterways": 47
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 14,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0073_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0073_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.91692727188554,
|
| 17 |
+
"lat": 6.870192118657874
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
79.9395729143533,
|
| 23 |
+
6.892675158805842
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0073_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "98b963ddc8eaac619ca7b8cd417f3a54c922081d0c1a3a47b38d9fd48a7b3398",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0073_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0073_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0073_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0073_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0073_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0073_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0073_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 108.7627,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 17.7425,
|
| 91 |
+
"max": 20.5503,
|
| 92 |
+
"mean": 18.7086,
|
| 93 |
+
"median": 18.6322,
|
| 94 |
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"p90": 19.5189
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 260775,
|
| 101 |
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"min": 0.0097,
|
| 102 |
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"max": 234.7717,
|
| 103 |
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"mean": 49.8058,
|
| 104 |
+
"median": 47.0754,
|
| 105 |
+
"p90": 88.8751
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 50,
|
| 122 |
+
"major_roads": 2357,
|
| 123 |
+
"schools_waterpoints": 49,
|
| 124 |
+
"urban_landuse": 15480,
|
| 125 |
+
"water_surface": 42,
|
| 126 |
+
"waterways": 110
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 2,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0074_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
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"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
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"chip_id": "colombo_dengue_s0074_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 79.92301491616284,
|
| 17 |
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"lat": 6.971727819731295
|
| 18 |
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|
| 19 |
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"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
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|
| 23 |
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|
| 24 |
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],
|
| 25 |
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"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0074_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "528a7b55879f732e3d3a20610140820c957160a2709bc77c086a53af20fcf473",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0074_label_positive_jitter",
|
| 40 |
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"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0074_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
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"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0074_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0074_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0074_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0074_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0074_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
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"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 82.9069,
|
| 84 |
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|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": 17.786,
|
| 91 |
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"max": 19.654,
|
| 92 |
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"mean": 18.3994,
|
| 93 |
+
"median": 18.2644,
|
| 94 |
+
"p90": 19.0609
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 4389,
|
| 101 |
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"min": 0.0882,
|
| 102 |
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"max": 66.8118,
|
| 103 |
+
"mean": 6.3344,
|
| 104 |
+
"median": 1.6025,
|
| 105 |
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"p90": 18.0564
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
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|
| 122 |
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"major_roads": 1161,
|
| 123 |
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"schools_waterpoints": 17,
|
| 124 |
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|
| 125 |
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"water_surface": 18,
|
| 126 |
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"waterways": 14
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 1,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
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"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
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},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0075_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0075_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 79.90158216728992,
|
| 17 |
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"lat": 6.886227452733511
|
| 18 |
+
},
|
| 19 |
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"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
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|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0075_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "13118f6e3c0975a7dece54f8412bc713346722c84f15600d70d28981fb5caf4a",
|
| 34 |
+
"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0075_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0075_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0075_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0075_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0075_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0075_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0075_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 108.6662,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 17.0176,
|
| 91 |
+
"max": 18.9456,
|
| 92 |
+
"mean": 18.0056,
|
| 93 |
+
"median": 18.0331,
|
| 94 |
+
"p90": 18.4095
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 260286,
|
| 101 |
+
"min": 0.0097,
|
| 102 |
+
"max": 250.1886,
|
| 103 |
+
"mean": 49.0579,
|
| 104 |
+
"median": 47.1815,
|
| 105 |
+
"p90": 88.6839
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 47,
|
| 122 |
+
"major_roads": 2461,
|
| 123 |
+
"schools_waterpoints": 74,
|
| 124 |
+
"urban_landuse": 13462,
|
| 125 |
+
"water_surface": 56,
|
| 126 |
+
"waterways": 82
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 1,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0078_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0078_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.84342520152074,
|
| 17 |
+
"lat": 6.91536240098644
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
79.86607300227632,
|
| 23 |
+
6.9378454411344075
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0078_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "75e4bee7a646e6620ee896030fb407bd3fb3c923599080b8d9298607f8e2b0d5",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0078_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0078_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0078_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0078_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0078_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0078_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0078_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 99.467,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
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"min": -6709.2012,
|
| 91 |
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"max": 15.6281,
|
| 92 |
+
"mean": -1685.6351,
|
| 93 |
+
"median": -1270.7112,
|
| 94 |
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"p90": -218.9911
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 136166,
|
| 101 |
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"min": 0.004,
|
| 102 |
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"max": 644.3534,
|
| 103 |
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"mean": 64.8188,
|
| 104 |
+
"median": 31.8249,
|
| 105 |
+
"p90": 182.1264
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 37,
|
| 122 |
+
"major_roads": 2073,
|
| 123 |
+
"schools_waterpoints": 91,
|
| 124 |
+
"urban_landuse": 6223,
|
| 125 |
+
"water_surface": 21,
|
| 126 |
+
"waterways": 10
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 7,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0079_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0079_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 79.86460789821024,
|
| 17 |
+
"lat": 6.91636211363625
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
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|
| 23 |
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|
| 24 |
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],
|
| 25 |
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"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0079_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "528d53bdbae5dfb432dca59bf85f217283578566f8561bfa2e17e6a5c1900284",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0079_label_positive_jitter",
|
| 40 |
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"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0079_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
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"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0079_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0079_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0079_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0079_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0079_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
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"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 103.58,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": -4091.8059,
|
| 91 |
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"max": 17.5512,
|
| 92 |
+
"mean": -606.2642,
|
| 93 |
+
"median": -270.9108,
|
| 94 |
+
"p90": 17.0959
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 237934,
|
| 101 |
+
"min": 0.0083,
|
| 102 |
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"max": 623.0394,
|
| 103 |
+
"mean": 94.5556,
|
| 104 |
+
"median": 59.0876,
|
| 105 |
+
"p90": 237.745
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 76,
|
| 122 |
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"major_roads": 3443,
|
| 123 |
+
"schools_waterpoints": 173,
|
| 124 |
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"urban_landuse": 15516,
|
| 125 |
+
"water_surface": 47,
|
| 126 |
+
"waterways": 36
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 12,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0081_hard_negative_water_urban_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0081_hard_negative_water_urban",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 80.07959960989264,
|
| 17 |
+
"lat": 6.806460228629011
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
80.10224223180998,
|
| 23 |
+
6.828943268776979
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0081_hard_negative_water_urban_packet.png",
|
| 33 |
+
"sha256": "bd2085c065c09446eabb9d465e42dec4537d498c2f7da77fa239f62372eac52c",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0081_hard_negative_water_urban",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0081_hard_negative_water_urban/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0081_hard_negative_water_urban/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0081_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0081_hard_negative_water_urban/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0081_hard_negative_water_urban/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0081_hard_negative_water_urban/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "hard_negative_water_urban",
|
| 83 |
+
"packet_std": 102.5621,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 21.7276,
|
| 91 |
+
"max": 26.7214,
|
| 92 |
+
"mean": 25.5408,
|
| 93 |
+
"median": 25.8228,
|
| 94 |
+
"p90": 26.45
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 142402,
|
| 101 |
+
"min": 0.0418,
|
| 102 |
+
"max": 35.2665,
|
| 103 |
+
"mean": 6.0266,
|
| 104 |
+
"median": 4.3011,
|
| 105 |
+
"p90": 12.4117
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 1,
|
| 122 |
+
"major_roads": 189,
|
| 123 |
+
"schools_waterpoints": 3,
|
| 124 |
+
"urban_landuse": 4011,
|
| 125 |
+
"water_surface": 8,
|
| 126 |
+
"waterways": 4
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "hard_negative_water_urban",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0082_hard_negative_water_urban_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0082_hard_negative_water_urban",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.87699406063919,
|
| 17 |
+
"lat": 6.864142246476255
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
79.85434870614127,
|
| 21 |
+
6.841659206328287,
|
| 22 |
+
79.89963941513712,
|
| 23 |
+
6.886625286624223
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0082_hard_negative_water_urban_packet.png",
|
| 33 |
+
"sha256": "e94cc26385e1e061cce45d1922c55623cbfd3032e36ec4a154c754e52bec6072",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0082_hard_negative_water_urban",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0082_hard_negative_water_urban/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0082_hard_negative_water_urban/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0082_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0082_hard_negative_water_urban/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0082_hard_negative_water_urban/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0082_hard_negative_water_urban/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "hard_negative_water_urban",
|
| 83 |
+
"packet_std": 106.1512,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": -4111.3574,
|
| 91 |
+
"max": 19.1941,
|
| 92 |
+
"mean": -897.1918,
|
| 93 |
+
"median": 17.7135,
|
| 94 |
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"p90": 18.5068
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 239320,
|
| 101 |
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"min": 0.0368,
|
| 102 |
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"max": 364.7652,
|
| 103 |
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"mean": 82.5018,
|
| 104 |
+
"median": 75.1323,
|
| 105 |
+
"p90": 142.4684
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 51,
|
| 122 |
+
"major_roads": 2632,
|
| 123 |
+
"schools_waterpoints": 107,
|
| 124 |
+
"urban_landuse": 41536,
|
| 125 |
+
"water_surface": 23,
|
| 126 |
+
"waterways": 47
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "hard_negative_water_urban",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0087_hard_negative_water_urban_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
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|
|
|
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|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0087_hard_negative_water_urban",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.90212517179545,
|
| 17 |
+
"lat": 6.832776429801043
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
6.855259469949011
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0087_hard_negative_water_urban_packet.png",
|
| 33 |
+
"sha256": "6d9a664d69603fc25c03c0419c9e9f8dcc984fa9aca26d21a5ea92cf9375479a",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0087_hard_negative_water_urban",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0087_hard_negative_water_urban/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0087_hard_negative_water_urban/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0087_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0087_hard_negative_water_urban/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0087_hard_negative_water_urban/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0087_hard_negative_water_urban/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "hard_negative_water_urban",
|
| 83 |
+
"packet_std": 105.0799,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 18.1542,
|
| 91 |
+
"max": 21.2509,
|
| 92 |
+
"mean": 19.5436,
|
| 93 |
+
"median": 19.4605,
|
| 94 |
+
"p90": 20.5927
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 261693,
|
| 101 |
+
"min": 0.0363,
|
| 102 |
+
"max": 327.3088,
|
| 103 |
+
"mean": 42.3471,
|
| 104 |
+
"median": 38.056,
|
| 105 |
+
"p90": 81.386
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 34,
|
| 122 |
+
"major_roads": 1779,
|
| 123 |
+
"schools_waterpoints": 24,
|
| 124 |
+
"urban_landuse": 25337,
|
| 125 |
+
"water_surface": 26,
|
| 126 |
+
"waterways": 73
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "hard_negative_water_urban",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0088_hard_negative_water_urban_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0088_hard_negative_water_urban",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.95932388390177,
|
| 17 |
+
"lat": 6.8453870481409
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
79.98196834731591,
|
| 23 |
+
6.867870088288868
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0088_hard_negative_water_urban_packet.png",
|
| 33 |
+
"sha256": "5a9e06c93114a6e16e27e24a63f369f5a1c5941bdc8c6b50f5273c2861d15cfb",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0088_hard_negative_water_urban",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0088_hard_negative_water_urban/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0088_hard_negative_water_urban/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0088_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0088_hard_negative_water_urban/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0088_hard_negative_water_urban/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0088_hard_negative_water_urban/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "hard_negative_water_urban",
|
| 83 |
+
"packet_std": 104.4093,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 19.2341,
|
| 91 |
+
"max": 23.8501,
|
| 92 |
+
"mean": 21.6356,
|
| 93 |
+
"median": 21.6151,
|
| 94 |
+
"p90": 23.0697
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 262144,
|
| 101 |
+
"min": 0.5864,
|
| 102 |
+
"max": 168.562,
|
| 103 |
+
"mean": 31.5623,
|
| 104 |
+
"median": 28.2127,
|
| 105 |
+
"p90": 56.339
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 10,
|
| 122 |
+
"major_roads": 1444,
|
| 123 |
+
"schools_waterpoints": 16,
|
| 124 |
+
"urban_landuse": 8021,
|
| 125 |
+
"water_surface": 1,
|
| 126 |
+
"waterways": 23
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 1,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "hard_negative_water_urban",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0091_hard_negative_water_urban_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0091_hard_negative_water_urban",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.87741227650409,
|
| 17 |
+
"lat": 6.803467389526156
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
79.85476979572285,
|
| 21 |
+
6.780984349378188,
|
| 22 |
+
79.90005475728533,
|
| 23 |
+
6.825950429674124
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0091_hard_negative_water_urban_packet.png",
|
| 33 |
+
"sha256": "fbfa6de267ee0f733491b5186b303ddc64d477ba58d8109fd9f70a02b133f1c9",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0091_hard_negative_water_urban",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0091_hard_negative_water_urban/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0091_hard_negative_water_urban/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0091_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0091_hard_negative_water_urban/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0091_hard_negative_water_urban/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0091_hard_negative_water_urban/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "hard_negative_water_urban",
|
| 83 |
+
"packet_std": 108.7285,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": -4026.656,
|
| 91 |
+
"max": 19.9384,
|
| 92 |
+
"mean": -886.8601,
|
| 93 |
+
"median": 18.5412,
|
| 94 |
+
"p90": 19.6024
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 178745,
|
| 101 |
+
"min": 0.1075,
|
| 102 |
+
"max": 496.5023,
|
| 103 |
+
"mean": 68.405,
|
| 104 |
+
"median": 65.2655,
|
| 105 |
+
"p90": 122.6315
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 8,
|
| 122 |
+
"major_roads": 1250,
|
| 123 |
+
"schools_waterpoints": 21,
|
| 124 |
+
"urban_landuse": 21559,
|
| 125 |
+
"water_surface": 6,
|
| 126 |
+
"waterways": 63
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "hard_negative_water_urban",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0092_hard_negative_water_urban_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0092_hard_negative_water_urban",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.8688214342122,
|
| 17 |
+
"lat": 6.864604046078684
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
79.84617605774208,
|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
6.887087086226652
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0092_hard_negative_water_urban_packet.png",
|
| 33 |
+
"sha256": "d59a4c6b4597b00ce96359c09a19fbb00f947afc91009a1e48b62ae27d48322d",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0092_hard_negative_water_urban",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0092_hard_negative_water_urban/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0092_hard_negative_water_urban/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0092_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0092_hard_negative_water_urban/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0092_hard_negative_water_urban/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0092_hard_negative_water_urban/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "hard_negative_water_urban",
|
| 83 |
+
"packet_std": 104.7243,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": -5748.6201,
|
| 91 |
+
"max": 18.8616,
|
| 92 |
+
"mean": -1760.3535,
|
| 93 |
+
"median": -1176.238,
|
| 94 |
+
"p90": 18.251
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 192741,
|
| 101 |
+
"min": 0.0993,
|
| 102 |
+
"max": 365.1373,
|
| 103 |
+
"mean": 89.3351,
|
| 104 |
+
"median": 85.2053,
|
| 105 |
+
"p90": 151.2589
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 50,
|
| 122 |
+
"major_roads": 2209,
|
| 123 |
+
"schools_waterpoints": 86,
|
| 124 |
+
"urban_landuse": 35086,
|
| 125 |
+
"water_surface": 12,
|
| 126 |
+
"waterways": 20
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "hard_negative_water_urban",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0094_hard_negative_water_urban_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0094_hard_negative_water_urban",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.88421583786746,
|
| 17 |
+
"lat": 6.999760154694363
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
79.90686771008015,
|
| 23 |
+
7.022243194842331
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0094_hard_negative_water_urban_packet.png",
|
| 33 |
+
"sha256": "f44e2ba4fccb1b1f8585f785876df2695e00086e8c3d72985f24e9a4f9f740ee",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0094_hard_negative_water_urban",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0094_hard_negative_water_urban/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0094_hard_negative_water_urban/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0094_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0094_hard_negative_water_urban/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0094_hard_negative_water_urban/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0094_hard_negative_water_urban/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "hard_negative_water_urban",
|
| 83 |
+
"packet_std": 69.363,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": -2666.1184,
|
| 91 |
+
"max": 18.0343,
|
| 92 |
+
"mean": -381.7099,
|
| 93 |
+
"median": 17.6347,
|
| 94 |
+
"p90": 17.863
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 5684,
|
| 101 |
+
"min": 0.0088,
|
| 102 |
+
"max": 360.8481,
|
| 103 |
+
"mean": 128.1021,
|
| 104 |
+
"median": 71.0654,
|
| 105 |
+
"p90": 338.98
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 8,
|
| 122 |
+
"major_roads": 1468,
|
| 123 |
+
"schools_waterpoints": 10,
|
| 124 |
+
"urban_landuse": 16862,
|
| 125 |
+
"water_surface": 8,
|
| 126 |
+
"waterways": 25
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "hard_negative_water_urban",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0097_hard_negative_water_urban_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0097_hard_negative_water_urban",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.94260135424894,
|
| 17 |
+
"lat": 6.820295693894989
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
79.91995807905384,
|
| 21 |
+
6.797812653747021,
|
| 22 |
+
79.96524462944403,
|
| 23 |
+
6.842778734042957
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0097_hard_negative_water_urban_packet.png",
|
| 33 |
+
"sha256": "a5239b1884dfa06892ffea08e47c95e1ecf2b57badd123c87c739e8377b2e15f",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0097_hard_negative_water_urban",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0097_hard_negative_water_urban/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0097_hard_negative_water_urban/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0097_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0097_hard_negative_water_urban/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0097_hard_negative_water_urban/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0097_hard_negative_water_urban/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "hard_negative_water_urban",
|
| 83 |
+
"packet_std": 104.1134,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 19.9384,
|
| 91 |
+
"max": 23.3143,
|
| 92 |
+
"mean": 21.8094,
|
| 93 |
+
"median": 21.8289,
|
| 94 |
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"p90": 22.6887
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 262144,
|
| 101 |
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"min": 0.4707,
|
| 102 |
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"max": 166.8707,
|
| 103 |
+
"mean": 34.6458,
|
| 104 |
+
"median": 32.2507,
|
| 105 |
+
"p90": 63.8388
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 10,
|
| 122 |
+
"major_roads": 1525,
|
| 123 |
+
"schools_waterpoints": 15,
|
| 124 |
+
"urban_landuse": 5519,
|
| 125 |
+
"water_surface": 2,
|
| 126 |
+
"waterways": 23
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 1,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "hard_negative_water_urban",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0098_hard_negative_water_urban_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
|
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|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0098_hard_negative_water_urban",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.92015901920419,
|
| 17 |
+
"lat": 6.948696164534713
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
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|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0098_hard_negative_water_urban_packet.png",
|
| 33 |
+
"sha256": "045ce05ec09ff368ef0f8f68747dba8c3ab11dad1c3bc2fc5db345ef1392bd65",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0098_hard_negative_water_urban",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0098_hard_negative_water_urban/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0098_hard_negative_water_urban/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0098_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0098_hard_negative_water_urban/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0098_hard_negative_water_urban/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0098_hard_negative_water_urban/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "hard_negative_water_urban",
|
| 83 |
+
"packet_std": 94.3891,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 17.4942,
|
| 91 |
+
"max": 19.8328,
|
| 92 |
+
"mean": 18.4543,
|
| 93 |
+
"median": 18.3381,
|
| 94 |
+
"p90": 19.2401
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 133106,
|
| 101 |
+
"min": 0.0882,
|
| 102 |
+
"max": 253.3565,
|
| 103 |
+
"mean": 51.3249,
|
| 104 |
+
"median": 42.1442,
|
| 105 |
+
"p90": 102.254
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 5,
|
| 122 |
+
"major_roads": 1527,
|
| 123 |
+
"schools_waterpoints": 21,
|
| 124 |
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"urban_landuse": 24766,
|
| 125 |
+
"water_surface": 31,
|
| 126 |
+
"waterways": 26
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 1,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "hard_negative_water_urban",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0100_hard_negative_water_urban_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0100_hard_negative_water_urban",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.89009868527558,
|
| 17 |
+
"lat": 6.802258760453429
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
79.9127411090784,
|
| 23 |
+
6.824741800601397
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0100_hard_negative_water_urban_packet.png",
|
| 33 |
+
"sha256": "1858b9ccb63799d040a82523c41603d9f7c8e9b2f5e7eacd162660b861a65d7b",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0100_hard_negative_water_urban",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0100_hard_negative_water_urban/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0100_hard_negative_water_urban/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0100_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0100_hard_negative_water_urban/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0100_hard_negative_water_urban/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0100_hard_negative_water_urban/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "hard_negative_water_urban",
|
| 83 |
+
"packet_std": 106.7124,
|
| 84 |
+
"repair_attempts": 1
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": -1484.9777,
|
| 91 |
+
"max": 20.7777,
|
| 92 |
+
"mean": -106.6902,
|
| 93 |
+
"median": 19.285,
|
| 94 |
+
"p90": 20.353
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 243542,
|
| 101 |
+
"min": 0.0294,
|
| 102 |
+
"max": 498.2065,
|
| 103 |
+
"mean": 59.3201,
|
| 104 |
+
"median": 52.9479,
|
| 105 |
+
"p90": 109.2601
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 8,
|
| 122 |
+
"major_roads": 1513,
|
| 123 |
+
"schools_waterpoints": 25,
|
| 124 |
+
"urban_landuse": 28889,
|
| 125 |
+
"water_surface": 6,
|
| 126 |
+
"waterways": 78
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "hard_negative_water_urban",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0103_hard_negative_water_urban_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0103_hard_negative_water_urban",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.88713602381023,
|
| 17 |
+
"lat": 6.908364183589491
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
79.8644885583859,
|
| 21 |
+
6.885881143441523,
|
| 22 |
+
79.90978348923456,
|
| 23 |
+
6.930847223737459
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0103_hard_negative_water_urban_packet.png",
|
| 33 |
+
"sha256": "264300854893899b0dff60f118145aa772c61b0636e2439beec50c4c843f4660",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0103_hard_negative_water_urban",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0103_hard_negative_water_urban/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0103_hard_negative_water_urban/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0103_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0103_hard_negative_water_urban/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0103_hard_negative_water_urban/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0103_hard_negative_water_urban/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "hard_negative_water_urban",
|
| 83 |
+
"packet_std": 107.6132,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": -1621.9176,
|
| 91 |
+
"max": 18.126,
|
| 92 |
+
"mean": -67.7284,
|
| 93 |
+
"median": 17.3601,
|
| 94 |
+
"p90": 17.9375
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 261865,
|
| 101 |
+
"min": 0.0208,
|
| 102 |
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"max": 477.9577,
|
| 103 |
+
"mean": 71.7185,
|
| 104 |
+
"median": 52.6553,
|
| 105 |
+
"p90": 165.2674
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 75,
|
| 122 |
+
"major_roads": 2768,
|
| 123 |
+
"schools_waterpoints": 130,
|
| 124 |
+
"urban_landuse": 12273,
|
| 125 |
+
"water_surface": 46,
|
| 126 |
+
"waterways": 91
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 8,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "hard_negative_water_urban",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0106_hard_negative_water_urban_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
|
|
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|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0106_hard_negative_water_urban",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.89393836368309,
|
| 17 |
+
"lat": 6.982600737626014
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
79.87128732336208,
|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
7.005083777773982
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0106_hard_negative_water_urban_packet.png",
|
| 33 |
+
"sha256": "9eda60852b78a96230164dd51fc8fb2f57376fcc5ab7758f98c919c63c1dcb0f",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0106_hard_negative_water_urban",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0106_hard_negative_water_urban/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0106_hard_negative_water_urban/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0106_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0106_hard_negative_water_urban/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0106_hard_negative_water_urban/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0106_hard_negative_water_urban/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "hard_negative_water_urban",
|
| 83 |
+
"packet_std": 66.3562,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": -718.1699,
|
| 91 |
+
"max": 18.2152,
|
| 92 |
+
"mean": -11.2283,
|
| 93 |
+
"median": 17.8078,
|
| 94 |
+
"p90": 18.0542
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 28609,
|
| 101 |
+
"min": 0.0989,
|
| 102 |
+
"max": 452.3582,
|
| 103 |
+
"mean": 146.3664,
|
| 104 |
+
"median": 137.4942,
|
| 105 |
+
"p90": 312.9599
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 15,
|
| 122 |
+
"major_roads": 1661,
|
| 123 |
+
"schools_waterpoints": 31,
|
| 124 |
+
"urban_landuse": 19704,
|
| 125 |
+
"water_surface": 11,
|
| 126 |
+
"waterways": 64
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "hard_negative_water_urban",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0109_hard_negative_water_urban_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0109_hard_negative_water_urban",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.8886906262154,
|
| 17 |
+
"lat": 6.78017934410313
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
79.86604924147956,
|
| 21 |
+
6.7576963039551625,
|
| 22 |
+
79.91133201095126,
|
| 23 |
+
6.802662384251098
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0109_hard_negative_water_urban_packet.png",
|
| 33 |
+
"sha256": "c762333b714bc5013e95cf067969a2e7933b20edffc83e6461504ea0187a6993",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0109_hard_negative_water_urban",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0109_hard_negative_water_urban/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0109_hard_negative_water_urban/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0109_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0109_hard_negative_water_urban/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0109_hard_negative_water_urban/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0109_hard_negative_water_urban/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "hard_negative_water_urban",
|
| 83 |
+
"packet_std": 110.3634,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": -1772.0696,
|
| 91 |
+
"max": 20.7158,
|
| 92 |
+
"mean": -159.3882,
|
| 93 |
+
"median": 18.512,
|
| 94 |
+
"p90": 20.1752
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 145907,
|
| 101 |
+
"min": 0.0115,
|
| 102 |
+
"max": 1414.5193,
|
| 103 |
+
"mean": 71.938,
|
| 104 |
+
"median": 65.3759,
|
| 105 |
+
"p90": 123.5395
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 7,
|
| 122 |
+
"major_roads": 933,
|
| 123 |
+
"schools_waterpoints": 17,
|
| 124 |
+
"urban_landuse": 27029,
|
| 125 |
+
"water_surface": 3,
|
| 126 |
+
"waterways": 11
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "hard_negative_water_urban",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0110_hard_negative_water_urban_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0110_hard_negative_water_urban",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.8722746639987,
|
| 17 |
+
"lat": 6.8663396549837215
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
79.84962920493565,
|
| 21 |
+
6.843856614835754,
|
| 22 |
+
79.89492012306174,
|
| 23 |
+
6.888822695131689
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0110_hard_negative_water_urban_packet.png",
|
| 33 |
+
"sha256": "40fe376094ef1dcead5f478b85064714b1a2d5a93fe6bd23121880e46a347ed9",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0110_hard_negative_water_urban",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0110_hard_negative_water_urban/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0110_hard_negative_water_urban/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0110_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0110_hard_negative_water_urban/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0110_hard_negative_water_urban/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0110_hard_negative_water_urban/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "hard_negative_water_urban",
|
| 83 |
+
"packet_std": 105.1605,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
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"min": -5056.8359,
|
| 91 |
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"max": 18.9411,
|
| 92 |
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"mean": -1345.597,
|
| 93 |
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"median": -502.2032,
|
| 94 |
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"p90": 18.3112
|
| 95 |
+
},
|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 214361,
|
| 101 |
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"min": 0.0405,
|
| 102 |
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"max": 365.9317,
|
| 103 |
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"mean": 84.6171,
|
| 104 |
+
"median": 76.4939,
|
| 105 |
+
"p90": 146.2027
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 55,
|
| 122 |
+
"major_roads": 2403,
|
| 123 |
+
"schools_waterpoints": 94,
|
| 124 |
+
"urban_landuse": 37037,
|
| 125 |
+
"water_surface": 18,
|
| 126 |
+
"waterways": 27
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
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"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "hard_negative_water_urban",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0113_hard_negative_water_urban_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0113_hard_negative_water_urban",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 80.02193617447962,
|
| 17 |
+
"lat": 6.941798684458232
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
79.9992871038466,
|
| 21 |
+
6.919315644310264,
|
| 22 |
+
80.04458524511264,
|
| 23 |
+
6.9642817246062
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0113_hard_negative_water_urban_packet.png",
|
| 33 |
+
"sha256": "549654f65b6805447415f6806d688ba8f4e4a72c72eb23330178074f85360c11",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0113_hard_negative_water_urban",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0113_hard_negative_water_urban/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0113_hard_negative_water_urban/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0113_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0113_hard_negative_water_urban/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0113_hard_negative_water_urban/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0113_hard_negative_water_urban/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "hard_negative_water_urban",
|
| 83 |
+
"packet_std": 110.8903,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 21.7039,
|
| 91 |
+
"max": 23.5227,
|
| 92 |
+
"mean": 22.8744,
|
| 93 |
+
"median": 22.9224,
|
| 94 |
+
"p90": 23.4174
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 70214,
|
| 101 |
+
"min": 0.0386,
|
| 102 |
+
"max": 97.5275,
|
| 103 |
+
"mean": 19.6815,
|
| 104 |
+
"median": 17.3586,
|
| 105 |
+
"p90": 37.8676
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 3,
|
| 122 |
+
"major_roads": 554,
|
| 123 |
+
"schools_waterpoints": 3,
|
| 124 |
+
"urban_landuse": 7514,
|
| 125 |
+
"water_surface": 37,
|
| 126 |
+
"waterways": 13
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "hard_negative_water_urban",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|