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- sidecars/colombo_dengue/colombo_dengue_s0003_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0004_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0005_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0008_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0011_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0017_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0020_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0021_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0027_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0032_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0033_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0035_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0038_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0039_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0041_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0046_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0052_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0053_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0054_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0058_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0059_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0062_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0064_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0065_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0069_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0070_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0076_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0077_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0080_label_positive_jitter_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0083_hard_negative_water_urban_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0089_hard_negative_water_urban_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0090_hard_negative_water_urban_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0093_hard_negative_water_urban_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0099_hard_negative_water_urban_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0101_hard_negative_water_urban_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0102_hard_negative_water_urban_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0108_hard_negative_water_urban_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0111_hard_negative_water_urban_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0112_hard_negative_water_urban_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0118_hard_negative_water_urban_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0124_hard_negative_water_urban_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0127_hard_negative_water_urban_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0128_hard_negative_water_urban_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0137_hard_negative_water_urban_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0138_hard_negative_water_urban_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0141_hard_negative_water_urban_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0142_hard_negative_water_urban_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0150_exposure_context_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0152_exposure_context_sidecar.json +149 -0
- sidecars/colombo_dengue/colombo_dengue_s0153_exposure_context_sidecar.json +149 -0
sidecars/colombo_dengue/colombo_dengue_s0003_label_positive_jitter_sidecar.json
ADDED
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| 1 |
+
{
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| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
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| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
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| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
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| 5 |
+
"chip_id": "colombo_dengue_s0003_label_positive_jitter",
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| 6 |
+
"aoi_id": "colombo_dengue",
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| 7 |
+
"split": "validation",
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| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.86105411316349,
|
| 17 |
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"lat": 6.913254095489637
|
| 18 |
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},
|
| 19 |
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"bbox": [
|
| 20 |
+
79.83840641346748,
|
| 21 |
+
6.890771055341669,
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| 22 |
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79.8837018128595,
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| 23 |
+
6.935737135637605
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| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0003_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "1406df67dde015b5560a7ba1a3ce9674adca714350dd1098e07c30dae4e6aa67",
|
| 34 |
+
"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0003_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0003_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0003_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0003_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0003_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0003_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0003_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
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"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 101.8948,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": -4989.3833,
|
| 91 |
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"max": 17.5239,
|
| 92 |
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"mean": -830.9468,
|
| 93 |
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"median": -423.8506,
|
| 94 |
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"p90": 16.9388
|
| 95 |
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},
|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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"valid_pixels": 0
|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 217217,
|
| 101 |
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"min": 0.0083,
|
| 102 |
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"max": 638.5154,
|
| 103 |
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"mean": 87.9014,
|
| 104 |
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"median": 57.9276,
|
| 105 |
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"p90": 218.2968
|
| 106 |
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},
|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
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},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 80,
|
| 122 |
+
"major_roads": 3340,
|
| 123 |
+
"schools_waterpoints": 171,
|
| 124 |
+
"urban_landuse": 14272,
|
| 125 |
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"water_surface": 43,
|
| 126 |
+
"waterways": 21
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 14,
|
| 130 |
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"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 0,
|
| 132 |
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"disease_aggregate": 0
|
| 133 |
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}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0004_label_positive_jitter_sidecar.json
ADDED
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|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0004_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
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"lon": 79.86936530569537,
|
| 17 |
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"lat": 6.938923488687718
|
| 18 |
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},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
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|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0004_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "d3cb8a76f50765c92f21075abce739af5166ff2c350d1644e206265e2cafc731",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0004_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0004_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0004_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0004_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0004_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0004_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0004_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
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"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 99.143,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": -4097.6763,
|
| 91 |
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"max": 17.6964,
|
| 92 |
+
"mean": -533.533,
|
| 93 |
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"median": -121.7731,
|
| 94 |
+
"p90": 17.3271
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 236274,
|
| 101 |
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"min": 0.0083,
|
| 102 |
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"max": 637.0335,
|
| 103 |
+
"mean": 141.6336,
|
| 104 |
+
"median": 130.0459,
|
| 105 |
+
"p90": 287.4174
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 47,
|
| 122 |
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"major_roads": 2771,
|
| 123 |
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"schools_waterpoints": 128,
|
| 124 |
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"urban_landuse": 15805,
|
| 125 |
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"water_surface": 18,
|
| 126 |
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"waterways": 37
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 14,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0005_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0005_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
+
"lon": 79.87763014655387,
|
| 17 |
+
"lat": 6.899097792245276
|
| 18 |
+
},
|
| 19 |
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"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
6.921580832393244
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0005_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "9569fd424511c74f7bf7b3a4e5849aab1055f9cd4ded53fd456a08c50fe31fa4",
|
| 34 |
+
"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0005_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0005_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0005_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0005_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0005_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0005_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0005_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 106.2308,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": -3851.5007,
|
| 91 |
+
"max": 18.0214,
|
| 92 |
+
"mean": -441.9085,
|
| 93 |
+
"median": 17.0351,
|
| 94 |
+
"p90": 17.7646
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 261789,
|
| 101 |
+
"min": 0.066,
|
| 102 |
+
"max": 265.5389,
|
| 103 |
+
"mean": 65.068,
|
| 104 |
+
"median": 54.1897,
|
| 105 |
+
"p90": 136.5011
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 97,
|
| 122 |
+
"major_roads": 3471,
|
| 123 |
+
"schools_waterpoints": 165,
|
| 124 |
+
"urban_landuse": 14190,
|
| 125 |
+
"water_surface": 46,
|
| 126 |
+
"waterways": 64
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 11,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0008_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0008_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.86201457871451,
|
| 17 |
+
"lat": 6.906812870024023
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
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|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0008_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "5b3b6de2357d70e3eccde2e9b9577cf49245d64b16d5b22aeb40a640e11efc65",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0008_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0008_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0008_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0008_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0008_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0008_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0008_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 102.8427,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": -5776.1333,
|
| 91 |
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"max": 17.6667,
|
| 92 |
+
"mean": -1027.7347,
|
| 93 |
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"median": -487.884,
|
| 94 |
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"p90": 17.1248
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
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"valid_pixels": 0
|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
+
"valid_pixels": 209882,
|
| 101 |
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"min": 0.0207,
|
| 102 |
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"max": 633.1725,
|
| 103 |
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"mean": 76.7496,
|
| 104 |
+
"median": 57.6214,
|
| 105 |
+
"p90": 173.0579
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 84,
|
| 122 |
+
"major_roads": 3163,
|
| 123 |
+
"schools_waterpoints": 177,
|
| 124 |
+
"urban_landuse": 14360,
|
| 125 |
+
"water_surface": 40,
|
| 126 |
+
"waterways": 24
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 12,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0011_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
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"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0011_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
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"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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"chip_size_km": 5.0,
|
| 14 |
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|
| 15 |
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"center": {
|
| 16 |
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|
| 17 |
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|
| 18 |
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|
| 19 |
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|
| 20 |
+
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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|
| 25 |
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|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0011_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "f664db5a80d74ed080648153b9bde0c1b328da6cbc576336f31676d0030a1da3",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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|
| 37 |
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"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0011_label_positive_jitter",
|
| 40 |
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"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0011_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
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"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0011_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0011_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0011_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0011_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0011_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
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"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
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"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 103.8765,
|
| 84 |
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|
| 85 |
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|
| 86 |
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"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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|
| 90 |
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"min": -3223.7256,
|
| 91 |
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"max": 17.3938,
|
| 92 |
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"mean": -564.2268,
|
| 93 |
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"median": -299.2135,
|
| 94 |
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"p90": 17.0136
|
| 95 |
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},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
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},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 240679,
|
| 101 |
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"min": 0.0083,
|
| 102 |
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"max": 641.558,
|
| 103 |
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|
| 104 |
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"median": 70.1351,
|
| 105 |
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"p90": 276.8027
|
| 106 |
+
},
|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
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"osm_counts": {
|
| 121 |
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|
| 122 |
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"major_roads": 3424,
|
| 123 |
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|
| 124 |
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|
| 125 |
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|
| 126 |
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|
| 127 |
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},
|
| 128 |
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"label_counts": {
|
| 129 |
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"vector_label": 14,
|
| 130 |
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"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
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"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
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},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0017_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0017_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 79.8733484790452,
|
| 17 |
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"lat": 6.916448009989231
|
| 18 |
+
},
|
| 19 |
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"bbox": [
|
| 20 |
+
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|
| 21 |
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|
| 22 |
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|
| 23 |
+
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|
| 24 |
+
],
|
| 25 |
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"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
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"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0017_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "16c36071ea6f0fb653aaedf3fae13a8e25c6266860748460781720266502839f",
|
| 34 |
+
"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0017_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0017_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0017_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0017_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0017_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0017_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0017_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 105.0565,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": -2995.0969,
|
| 91 |
+
"max": 17.7654,
|
| 92 |
+
"mean": -319.2412,
|
| 93 |
+
"median": -11.7847,
|
| 94 |
+
"p90": 17.4136
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 261227,
|
| 101 |
+
"min": 0.0083,
|
| 102 |
+
"max": 528.0861,
|
| 103 |
+
"mean": 96.5694,
|
| 104 |
+
"median": 63.2823,
|
| 105 |
+
"p90": 228.8283
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 86,
|
| 122 |
+
"major_roads": 3459,
|
| 123 |
+
"schools_waterpoints": 183,
|
| 124 |
+
"urban_landuse": 16255,
|
| 125 |
+
"water_surface": 49,
|
| 126 |
+
"waterways": 53
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 12,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0020_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0020_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.86372048336698,
|
| 17 |
+
"lat": 6.919949427952192
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
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|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0020_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "6eb7f40ade4de06c05d012e6de485628e06716aec5d613a7735213b7d0813aa8",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0020_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0020_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0020_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0020_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0020_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0020_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0020_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
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"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 103.6036,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": -3715.3799,
|
| 91 |
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"max": 17.4659,
|
| 92 |
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"mean": -584.6195,
|
| 93 |
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"median": -295.7268,
|
| 94 |
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"p90": 17.0317
|
| 95 |
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},
|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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"valid_pixels": 0
|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 238376,
|
| 101 |
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"min": 0.0083,
|
| 102 |
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"max": 627.6815,
|
| 103 |
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"mean": 103.0877,
|
| 104 |
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"median": 61.6927,
|
| 105 |
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"p90": 259.4094
|
| 106 |
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},
|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 65,
|
| 122 |
+
"major_roads": 3448,
|
| 123 |
+
"schools_waterpoints": 157,
|
| 124 |
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"urban_landuse": 14873,
|
| 125 |
+
"water_surface": 45,
|
| 126 |
+
"waterways": 29
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
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"vector_label": 18,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0021_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
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"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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|
| 4 |
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|
| 5 |
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"chip_id": "colombo_dengue_s0021_label_positive_jitter",
|
| 6 |
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|
| 7 |
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"split": "validation",
|
| 8 |
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|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
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"country": "Sri Lanka",
|
| 11 |
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"name": "Colombo District, Sri Lanka",
|
| 12 |
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"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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|
| 14 |
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|
| 15 |
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|
| 16 |
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|
| 17 |
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|
| 18 |
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|
| 19 |
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|
| 20 |
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| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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|
| 25 |
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|
| 26 |
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|
| 27 |
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|
| 28 |
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|
| 29 |
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"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
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"path": "image_packets/colombo_dengue/colombo_dengue_s0021_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "f860ae6df98bd88e7a24591b3916cf59e6d71763f80a80e97cdf4b10783dc874",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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|
| 37 |
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|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
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"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0021_label_positive_jitter",
|
| 40 |
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|
| 41 |
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|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0021_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0021_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0021_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
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"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0021_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
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"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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|
| 49 |
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"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
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"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
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"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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|
| 83 |
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|
| 84 |
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|
| 85 |
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|
| 86 |
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|
| 87 |
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"raster_stats": {
|
| 88 |
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|
| 89 |
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|
| 90 |
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|
| 91 |
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"max": 16.2624,
|
| 92 |
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"mean": -1678.0759,
|
| 93 |
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"median": -1372.2673,
|
| 94 |
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"p90": -258.7116
|
| 95 |
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},
|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 147631,
|
| 101 |
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|
| 102 |
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"max": 641.5181,
|
| 103 |
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|
| 104 |
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"median": 15.4817,
|
| 105 |
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"p90": 252.8994
|
| 106 |
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|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
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|
| 109 |
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},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
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"valid_pixels": 0
|
| 112 |
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},
|
| 113 |
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"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
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},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
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"valid_pixels": 0
|
| 118 |
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}
|
| 119 |
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},
|
| 120 |
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|
| 121 |
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|
| 122 |
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|
| 123 |
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|
| 124 |
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|
| 125 |
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|
| 126 |
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|
| 127 |
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},
|
| 128 |
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"label_counts": {
|
| 129 |
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"vector_label": 4,
|
| 130 |
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|
| 131 |
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|
| 132 |
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|
| 133 |
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}
|
| 134 |
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},
|
| 135 |
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"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
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"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
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},
|
| 139 |
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"license_flags": {
|
| 140 |
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"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
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},
|
| 145 |
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"sampling": {
|
| 146 |
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"sample_type": "label_positive_jitter",
|
| 147 |
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"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0027_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0027_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
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"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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|
| 17 |
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|
| 18 |
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|
| 19 |
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|
| 20 |
+
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|
| 21 |
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|
| 22 |
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|
| 23 |
+
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|
| 24 |
+
],
|
| 25 |
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"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
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|
| 28 |
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"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0027_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "03a56fe0af0d7eb3186bbede15e7273ae5480c7f2a40403a868c8e3f180137e3",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0027_label_positive_jitter",
|
| 40 |
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"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0027_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0027_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0027_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0027_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0027_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0027_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
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"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
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"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 102.6376,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": -6607.6904,
|
| 91 |
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"max": 17.7435,
|
| 92 |
+
"mean": -1333.4789,
|
| 93 |
+
"median": -814.9282,
|
| 94 |
+
"p90": 17.1727
|
| 95 |
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},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 196980,
|
| 101 |
+
"min": 0.0752,
|
| 102 |
+
"max": 628.5494,
|
| 103 |
+
"mean": 71.5939,
|
| 104 |
+
"median": 58.5701,
|
| 105 |
+
"p90": 149.0497
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 84,
|
| 122 |
+
"major_roads": 3029,
|
| 123 |
+
"schools_waterpoints": 165,
|
| 124 |
+
"urban_landuse": 13707,
|
| 125 |
+
"water_surface": 37,
|
| 126 |
+
"waterways": 16
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 12,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0032_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0032_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.87071255458928,
|
| 17 |
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"lat": 6.919042862808717
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
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|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0032_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "0a30184ea9e46c3e21baea0294cb0fff8bebc1d0f0014fcf1f118f5c080f1dfe",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0032_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0032_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0032_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0032_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0032_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0032_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0032_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
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"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 104.6876,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": -3042.8882,
|
| 91 |
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"max": 17.6663,
|
| 92 |
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"mean": -369.3199,
|
| 93 |
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"median": -74.4917,
|
| 94 |
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"p90": 17.2996
|
| 95 |
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},
|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 258685,
|
| 101 |
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|
| 102 |
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|
| 103 |
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|
| 104 |
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"median": 66.4363,
|
| 105 |
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"p90": 247.8891
|
| 106 |
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},
|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
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},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
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},
|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
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"osm_counts": {
|
| 121 |
+
"health_facilities": 70,
|
| 122 |
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"major_roads": 3538,
|
| 123 |
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|
| 124 |
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"urban_landuse": 16658,
|
| 125 |
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"water_surface": 49,
|
| 126 |
+
"waterways": 46
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 18,
|
| 130 |
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"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0033_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
|
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|
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|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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|
| 4 |
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"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
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"chip_id": "colombo_dengue_s0033_label_positive_jitter",
|
| 6 |
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|
| 7 |
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"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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|
| 17 |
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|
| 18 |
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|
| 19 |
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|
| 20 |
+
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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|
| 25 |
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"panel_order": [
|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
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|
| 28 |
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"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0033_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "4cbbd43567b5f367e27397a174bd12c6d910836ae7a7ce794bba4dbdf7e0faa4",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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|
| 37 |
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"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0033_label_positive_jitter",
|
| 40 |
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"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0033_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
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"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0033_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0033_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0033_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0033_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
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"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0033_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
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"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
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"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 101.9898,
|
| 84 |
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|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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|
| 90 |
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"min": -4228.6475,
|
| 91 |
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"max": 17.3415,
|
| 92 |
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"mean": -760.3154,
|
| 93 |
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"median": -471.735,
|
| 94 |
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"p90": 16.7915
|
| 95 |
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},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
+
"valid_pixels": 220777,
|
| 101 |
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"min": 0.0083,
|
| 102 |
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"max": 646.17,
|
| 103 |
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"mean": 100.8406,
|
| 104 |
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"median": 56.8329,
|
| 105 |
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"p90": 264.1145
|
| 106 |
+
},
|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
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"osm_counts": {
|
| 121 |
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|
| 122 |
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"major_roads": 3288,
|
| 123 |
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|
| 124 |
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|
| 125 |
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|
| 126 |
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"waterways": 19
|
| 127 |
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},
|
| 128 |
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"label_counts": {
|
| 129 |
+
"vector_label": 20,
|
| 130 |
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"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0035_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0035_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 79.86766168574191,
|
| 17 |
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"lat": 6.942891588340193
|
| 18 |
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|
| 19 |
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"bbox": [
|
| 20 |
+
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|
| 21 |
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|
| 22 |
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|
| 23 |
+
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|
| 24 |
+
],
|
| 25 |
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"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
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"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0035_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "ff58a6186d20f1b5fc1f8786ed220ad838111bff63c021f09ce96c7b8a62361a",
|
| 34 |
+
"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0035_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0035_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0035_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0035_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0035_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0035_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0035_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 97.6105,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": -4821.918,
|
| 91 |
+
"max": 17.7158,
|
| 92 |
+
"mean": -713.4811,
|
| 93 |
+
"median": -203.456,
|
| 94 |
+
"p90": 17.3448
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 223163,
|
| 101 |
+
"min": 0.0083,
|
| 102 |
+
"max": 633.8397,
|
| 103 |
+
"mean": 146.074,
|
| 104 |
+
"median": 137.626,
|
| 105 |
+
"p90": 300.7679
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 24,
|
| 122 |
+
"major_roads": 2474,
|
| 123 |
+
"schools_waterpoints": 116,
|
| 124 |
+
"urban_landuse": 14927,
|
| 125 |
+
"water_surface": 18,
|
| 126 |
+
"waterways": 30
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 7,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0038_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0038_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.85944320781469,
|
| 17 |
+
"lat": 6.900731928907474
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
6.923214969055442
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0038_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "0d4ca623904662ddd59619d7a93f93ab1efa5389bbfa489aa8a8a0d0ebe76f6c",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0038_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0038_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0038_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0038_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0038_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0038_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0038_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 102.4684,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": -7124.2646,
|
| 91 |
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"max": 17.7436,
|
| 92 |
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"mean": -1549.9099,
|
| 93 |
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"median": -1038.9829,
|
| 94 |
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"p90": 17.0441
|
| 95 |
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},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
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"valid_pixels": 0
|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 184957,
|
| 101 |
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"min": 0.0752,
|
| 102 |
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"max": 378.8046,
|
| 103 |
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|
| 104 |
+
"median": 59.38,
|
| 105 |
+
"p90": 144.281
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 80,
|
| 122 |
+
"major_roads": 2907,
|
| 123 |
+
"schools_waterpoints": 156,
|
| 124 |
+
"urban_landuse": 12342,
|
| 125 |
+
"water_surface": 33,
|
| 126 |
+
"waterways": 14
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 12,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0039_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0039_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.87932294066549,
|
| 17 |
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"lat": 6.9369810353752115
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
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|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0039_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "cd37d9919863ab4a55787663811029b91e69680f20ce3a03e766a5459a2079ec",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0039_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0039_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0039_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0039_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0039_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0039_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0039_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 98.8089,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": -2504.5884,
|
| 91 |
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"max": 17.8929,
|
| 92 |
+
"mean": -197.4101,
|
| 93 |
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"median": 16.9355,
|
| 94 |
+
"p90": 17.631
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 246865,
|
| 101 |
+
"min": 0.1015,
|
| 102 |
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"max": 614.6329,
|
| 103 |
+
"mean": 134.6606,
|
| 104 |
+
"median": 116.6882,
|
| 105 |
+
"p90": 273.0236
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 51,
|
| 122 |
+
"major_roads": 2654,
|
| 123 |
+
"schools_waterpoints": 133,
|
| 124 |
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"urban_landuse": 19407,
|
| 125 |
+
"water_surface": 20,
|
| 126 |
+
"waterways": 43
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 14,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0041_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0041_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.86595512550542,
|
| 17 |
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"lat": 6.903102423967865
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
6.925585464115833
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0041_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "53d1e9f44c1ceb46baa4ad46fc73606adc51ef0a3153f704994498c12496876a",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0041_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0041_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0041_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0041_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0041_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0041_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0041_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 104.4989,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": -5605.105,
|
| 91 |
+
"max": 17.7995,
|
| 92 |
+
"mean": -956.3135,
|
| 93 |
+
"median": -420.8195,
|
| 94 |
+
"p90": 17.3963
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 226167,
|
| 101 |
+
"min": 0.0366,
|
| 102 |
+
"max": 626.1084,
|
| 103 |
+
"mean": 70.7704,
|
| 104 |
+
"median": 56.0937,
|
| 105 |
+
"p90": 152.7065
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 95,
|
| 122 |
+
"major_roads": 3313,
|
| 123 |
+
"schools_waterpoints": 174,
|
| 124 |
+
"urban_landuse": 15531,
|
| 125 |
+
"water_surface": 45,
|
| 126 |
+
"waterways": 39
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 12,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0046_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0046_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.87035202370055,
|
| 17 |
+
"lat": 6.922439544973916
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
79.84770388347809,
|
| 21 |
+
6.899956504825948,
|
| 22 |
+
79.893000163923,
|
| 23 |
+
6.944922585121883
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0046_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "d60fe49fbfc55173230aa010f43a4cace5ddef58ee2e2c5ecbcdbdeca5b6e6fd",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0046_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0046_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0046_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0046_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0046_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0046_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0046_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 104.6497,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": -2713.1011,
|
| 91 |
+
"max": 17.6113,
|
| 92 |
+
"mean": -358.5468,
|
| 93 |
+
"median": -83.2967,
|
| 94 |
+
"p90": 17.2691
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 258546,
|
| 101 |
+
"min": 0.0083,
|
| 102 |
+
"max": 622.8071,
|
| 103 |
+
"mean": 113.0072,
|
| 104 |
+
"median": 73.7488,
|
| 105 |
+
"p90": 266.6752
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 71,
|
| 122 |
+
"major_roads": 3553,
|
| 123 |
+
"schools_waterpoints": 171,
|
| 124 |
+
"urban_landuse": 16363,
|
| 125 |
+
"water_surface": 51,
|
| 126 |
+
"waterways": 45
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 18,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0052_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0052_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.86907230130922,
|
| 17 |
+
"lat": 6.920337007282411
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
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|
| 23 |
+
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|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0052_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "11c252ae3a617ff96ca6a805426eec93a56ea2164a35b43a8e35a4a5d70119c9",
|
| 34 |
+
"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0052_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0052_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0052_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0052_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0052_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0052_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0052_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 104.5605,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": -3081.5999,
|
| 91 |
+
"max": 17.6046,
|
| 92 |
+
"mean": -406.7776,
|
| 93 |
+
"median": -119.9184,
|
| 94 |
+
"p90": 17.2319
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 255947,
|
| 101 |
+
"min": 0.0083,
|
| 102 |
+
"max": 628.6684,
|
| 103 |
+
"mean": 105.4949,
|
| 104 |
+
"median": 66.6291,
|
| 105 |
+
"p90": 255.7505
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 70,
|
| 122 |
+
"major_roads": 3563,
|
| 123 |
+
"schools_waterpoints": 166,
|
| 124 |
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"urban_landuse": 16011,
|
| 125 |
+
"water_surface": 51,
|
| 126 |
+
"waterways": 45
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 18,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0053_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0053_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.92060572195189,
|
| 17 |
+
"lat": 6.796633838182275
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
6.8191168783302425
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0053_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "87af15fb00d3a153814ac0f4edf429c29066e48ad371105aa9414605d37e8434",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0053_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0053_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0053_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0053_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0053_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0053_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0053_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 106.1482,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 19.5035,
|
| 91 |
+
"max": 22.0682,
|
| 92 |
+
"mean": 21.0177,
|
| 93 |
+
"median": 21.1327,
|
| 94 |
+
"p90": 21.7703
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 255987,
|
| 101 |
+
"min": 0.0156,
|
| 102 |
+
"max": 240.3814,
|
| 103 |
+
"mean": 39.1565,
|
| 104 |
+
"median": 35.5783,
|
| 105 |
+
"p90": 69.5024
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 2,
|
| 122 |
+
"major_roads": 1405,
|
| 123 |
+
"schools_waterpoints": 13,
|
| 124 |
+
"urban_landuse": 10783,
|
| 125 |
+
"water_surface": 4,
|
| 126 |
+
"waterways": 22
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 1,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0054_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0054_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.83858186365461,
|
| 17 |
+
"lat": 6.935768222438369
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
79.86123064417494,
|
| 23 |
+
6.958251262586337
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0054_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "f8898e45699ec4f0bf93884fc0fe6dc200d80a8ab835692acd80eb10db307bbd",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0054_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0054_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0054_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0054_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0054_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0054_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0054_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 91.692,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": -7242.8188,
|
| 91 |
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"max": 15.7147,
|
| 92 |
+
"mean": -2081.7139,
|
| 93 |
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"median": -1673.9802,
|
| 94 |
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"p90": -296.6381
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
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"population_worldpop": {
|
| 100 |
+
"valid_pixels": 130534,
|
| 101 |
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"min": 0.0036,
|
| 102 |
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"max": 632.7894,
|
| 103 |
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"mean": 67.6078,
|
| 104 |
+
"median": 9.0579,
|
| 105 |
+
"p90": 245.1868
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 12,
|
| 122 |
+
"major_roads": 1384,
|
| 123 |
+
"schools_waterpoints": 34,
|
| 124 |
+
"urban_landuse": 3647,
|
| 125 |
+
"water_surface": 11,
|
| 126 |
+
"waterways": 10
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 4,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0058_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
|
|
|
|
|
|
|
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|
|
|
|
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|
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|
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|
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|
|
|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0058_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.87634748014106,
|
| 17 |
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"lat": 6.952724583133071
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
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|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0058_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "ef92495de6097dbfbc7151fca81dc4c42ac4a6c9a4802b29d155e0423e5d32ce",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0058_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0058_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0058_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0058_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0058_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0058_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0058_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
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"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 88.7274,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": -4241.7715,
|
| 91 |
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"max": 17.9541,
|
| 92 |
+
"mean": -539.3135,
|
| 93 |
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"median": 16.9287,
|
| 94 |
+
"p90": 17.7172
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 196080,
|
| 101 |
+
"min": 0.0115,
|
| 102 |
+
"max": 610.952,
|
| 103 |
+
"mean": 152.9419,
|
| 104 |
+
"median": 138.215,
|
| 105 |
+
"p90": 303.4198
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 25,
|
| 122 |
+
"major_roads": 2108,
|
| 123 |
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"schools_waterpoints": 90,
|
| 124 |
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"urban_landuse": 19807,
|
| 125 |
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"water_surface": 15,
|
| 126 |
+
"waterways": 65
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 6,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0059_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0059_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.8675208385367,
|
| 17 |
+
"lat": 6.937702620428565
|
| 18 |
+
},
|
| 19 |
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"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
6.960185660576533
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0059_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "0dfaef13bb15efc67ecb2331dd5b1fda29354b5a89ba472324d16c1777bba88a",
|
| 34 |
+
"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0059_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0059_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0059_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0059_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0059_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0059_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0059_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 100.1332,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": -4219.2666,
|
| 91 |
+
"max": 17.6408,
|
| 92 |
+
"mean": -578.6719,
|
| 93 |
+
"median": -179.7837,
|
| 94 |
+
"p90": 17.2472
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 238411,
|
| 101 |
+
"min": 0.0083,
|
| 102 |
+
"max": 627.3776,
|
| 103 |
+
"mean": 136.5292,
|
| 104 |
+
"median": 121.5559,
|
| 105 |
+
"p90": 285.6811
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 49,
|
| 122 |
+
"major_roads": 2883,
|
| 123 |
+
"schools_waterpoints": 127,
|
| 124 |
+
"urban_landuse": 14775,
|
| 125 |
+
"water_surface": 18,
|
| 126 |
+
"waterways": 29
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 14,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0062_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0062_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.87539338214376,
|
| 17 |
+
"lat": 6.944247073415113
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
79.89804257063729,
|
| 23 |
+
6.966730113563081
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0062_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "f2513a4b37ef27c9cc5198996d87dd4c83879810c0a7f16383fba09e5647c552",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0062_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0062_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0062_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0062_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0062_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0062_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0062_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 94.5938,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
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"min": -3693.1213,
|
| 91 |
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"max": 17.8696,
|
| 92 |
+
"mean": -409.8001,
|
| 93 |
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"median": 16.6104,
|
| 94 |
+
"p90": 17.5797
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
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"population_worldpop": {
|
| 100 |
+
"valid_pixels": 227590,
|
| 101 |
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"min": 0.0207,
|
| 102 |
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"max": 612.2249,
|
| 103 |
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"mean": 148.1073,
|
| 104 |
+
"median": 133.8674,
|
| 105 |
+
"p90": 296.3396
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 24,
|
| 122 |
+
"major_roads": 2303,
|
| 123 |
+
"schools_waterpoints": 119,
|
| 124 |
+
"urban_landuse": 18338,
|
| 125 |
+
"water_surface": 15,
|
| 126 |
+
"waterways": 60
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 7,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0064_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
|
|
|
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|
|
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|
|
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|
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|
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|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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|
| 4 |
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"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
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"chip_id": "colombo_dengue_s0064_label_positive_jitter",
|
| 6 |
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|
| 7 |
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"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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|
| 14 |
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"pixels": 512,
|
| 15 |
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|
| 16 |
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|
| 17 |
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|
| 18 |
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|
| 19 |
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"bbox": [
|
| 20 |
+
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|
| 21 |
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|
| 22 |
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|
| 23 |
+
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|
| 24 |
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|
| 25 |
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"panel_order": [
|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
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|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0064_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "83e393bb2df337453151b4b612e585036024bfb2f88be1a1bbe45a51afca299c",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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|
| 37 |
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"source_assets": {
|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0064_label_positive_jitter",
|
| 40 |
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"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0064_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
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"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0064_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0064_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0064_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0064_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
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"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0064_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
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"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
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"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
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"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 93.6126,
|
| 84 |
+
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|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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|
| 90 |
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"min": -6916.8198,
|
| 91 |
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"max": 14.6392,
|
| 92 |
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"mean": -1879.5088,
|
| 93 |
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"median": -1483.0698,
|
| 94 |
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"p90": -266.1247
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 142030,
|
| 101 |
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"min": 0.0036,
|
| 102 |
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"max": 632.4738,
|
| 103 |
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"mean": 74.6819,
|
| 104 |
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"median": 12.8237,
|
| 105 |
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"p90": 252.201
|
| 106 |
+
},
|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
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"osm_counts": {
|
| 121 |
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|
| 122 |
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"major_roads": 1631,
|
| 123 |
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|
| 124 |
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|
| 125 |
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"water_surface": 18,
|
| 126 |
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"waterways": 10
|
| 127 |
+
},
|
| 128 |
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"label_counts": {
|
| 129 |
+
"vector_label": 4,
|
| 130 |
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"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
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"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0065_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0065_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.87537826241692,
|
| 17 |
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"lat": 6.9257833263528426
|
| 18 |
+
},
|
| 19 |
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"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
6.94826636650081
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0065_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "45a275a0e4b6f2db378ca89a13bcb7d080d4bee3f6a1ec136056186409a90c57",
|
| 34 |
+
"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0065_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0065_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0065_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0065_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0065_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0065_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0065_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 104.307,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": -2051.5403,
|
| 91 |
+
"max": 17.7211,
|
| 92 |
+
"mean": -230.054,
|
| 93 |
+
"median": 16.6041,
|
| 94 |
+
"p90": 17.4492
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 261744,
|
| 101 |
+
"min": 0.0207,
|
| 102 |
+
"max": 610.441,
|
| 103 |
+
"mean": 120.3708,
|
| 104 |
+
"median": 86.8584,
|
| 105 |
+
"p90": 271.7501
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 68,
|
| 122 |
+
"major_roads": 3293,
|
| 123 |
+
"schools_waterpoints": 161,
|
| 124 |
+
"urban_landuse": 16302,
|
| 125 |
+
"water_surface": 43,
|
| 126 |
+
"waterways": 39
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 14,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0069_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0069_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.9090972989153,
|
| 17 |
+
"lat": 6.894187120326601
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
79.9317440860879,
|
| 23 |
+
6.916670160474569
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0069_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "f081270307e048452235f35041813cfe934cb77a8878bb6f297ca28f9394f9f6",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0069_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0069_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0069_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0069_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0069_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0069_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0069_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 110.5469,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
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"min": 17.1347,
|
| 91 |
+
"max": 19.0526,
|
| 92 |
+
"mean": 18.1065,
|
| 93 |
+
"median": 18.11,
|
| 94 |
+
"p90": 18.5911
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 259968,
|
| 101 |
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"min": 0.0097,
|
| 102 |
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"max": 248.9498,
|
| 103 |
+
"mean": 44.83,
|
| 104 |
+
"median": 40.1785,
|
| 105 |
+
"p90": 83.7863
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 46,
|
| 122 |
+
"major_roads": 2578,
|
| 123 |
+
"schools_waterpoints": 63,
|
| 124 |
+
"urban_landuse": 6183,
|
| 125 |
+
"water_surface": 52,
|
| 126 |
+
"waterways": 107
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 1,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0070_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
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|
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|
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|
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|
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|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
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"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0070_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 79.96458379506986,
|
| 17 |
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"lat": 6.857261725315924
|
| 18 |
+
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|
| 19 |
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"bbox": [
|
| 20 |
+
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|
| 21 |
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|
| 22 |
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|
| 23 |
+
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|
| 24 |
+
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|
| 25 |
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"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0070_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "c76fef1dc3b9f48d87c0a7fc050a226cd157baee77dd364dd23ad273ce8f3a28",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0070_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0070_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
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"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0070_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0070_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0070_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0070_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0070_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
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"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 104.569,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
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"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
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"min": 19.0237,
|
| 91 |
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"max": 23.1788,
|
| 92 |
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"mean": 21.1183,
|
| 93 |
+
"median": 21.0974,
|
| 94 |
+
"p90": 22.481
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 262144,
|
| 101 |
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"min": 0.9599,
|
| 102 |
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"max": 167.5469,
|
| 103 |
+
"mean": 30.0975,
|
| 104 |
+
"median": 26.3282,
|
| 105 |
+
"p90": 53.3653
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
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"health_facilities": 13,
|
| 122 |
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"major_roads": 1336,
|
| 123 |
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"schools_waterpoints": 12,
|
| 124 |
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"urban_landuse": 7471,
|
| 125 |
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"water_surface": 2,
|
| 126 |
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"waterways": 21
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 1,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0076_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0076_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
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"lon": 79.83562000473985,
|
| 17 |
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"lat": 6.92857802200468
|
| 18 |
+
},
|
| 19 |
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"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
6.951061062152648
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0076_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "df4351a267ce267c83b7c31a3a4d40837ae32cd43a12a15001aff73a65d4aad8",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0076_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0076_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0076_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0076_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0076_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0076_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0076_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 90.773,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": -6347.1602,
|
| 91 |
+
"max": 14.7861,
|
| 92 |
+
"mean": -1974.9663,
|
| 93 |
+
"median": -1736.3394,
|
| 94 |
+
"p90": -350.3766
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 117790,
|
| 101 |
+
"min": 0.0036,
|
| 102 |
+
"max": 628.0479,
|
| 103 |
+
"mean": 54.7471,
|
| 104 |
+
"median": 7.3286,
|
| 105 |
+
"p90": 183.6904
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 13,
|
| 122 |
+
"major_roads": 1335,
|
| 123 |
+
"schools_waterpoints": 28,
|
| 124 |
+
"urban_landuse": 3569,
|
| 125 |
+
"water_surface": 11,
|
| 126 |
+
"waterways": 10
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 2,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0077_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0077_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.8790666645105,
|
| 17 |
+
"lat": 6.949509896642328
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
79.90171610648991,
|
| 23 |
+
6.971992936790296
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0077_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "ddb612a75d3b76690a59d70111d5d39dbdef0ed9ac9ce24e9fe91c7edc073054",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0077_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0077_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0077_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0077_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0077_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0077_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0077_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 90.047,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": -3470.4653,
|
| 91 |
+
"max": 17.9673,
|
| 92 |
+
"mean": -357.2148,
|
| 93 |
+
"median": 17.0959,
|
| 94 |
+
"p90": 17.7373
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 204147,
|
| 101 |
+
"min": 0.0115,
|
| 102 |
+
"max": 612.4485,
|
| 103 |
+
"mean": 152.2272,
|
| 104 |
+
"median": 138.0425,
|
| 105 |
+
"p90": 295.4095
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 22,
|
| 122 |
+
"major_roads": 2215,
|
| 123 |
+
"schools_waterpoints": 101,
|
| 124 |
+
"urban_landuse": 21762,
|
| 125 |
+
"water_surface": 19,
|
| 126 |
+
"waterways": 58
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 7,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0080_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
|
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|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
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"chip_id": "colombo_dengue_s0080_label_positive_jitter",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 79.85762902708133,
|
| 17 |
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"lat": 6.920866406784564
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
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|
| 23 |
+
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|
| 24 |
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],
|
| 25 |
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"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0080_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "047f7e64483dc0a1739fa292fd5fbb0f3ee7c7a33bfa60f8aae6ec04931b4b4c",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0080_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0080_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
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"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0080_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0080_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0080_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0080_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0080_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
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"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 101.7526,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": -4239.4844,
|
| 91 |
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"max": 17.2819,
|
| 92 |
+
"mean": -806.7302,
|
| 93 |
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"median": -528.3219,
|
| 94 |
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"p90": 16.6633
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 216298,
|
| 101 |
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"min": 0.0083,
|
| 102 |
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"max": 617.0729,
|
| 103 |
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"mean": 100.7747,
|
| 104 |
+
"median": 54.6586,
|
| 105 |
+
"p90": 269.4998
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 57,
|
| 122 |
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"major_roads": 3178,
|
| 123 |
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"schools_waterpoints": 151,
|
| 124 |
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"urban_landuse": 11595,
|
| 125 |
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"water_surface": 33,
|
| 126 |
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"waterways": 18
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 20,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0083_hard_negative_water_urban_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0083_hard_negative_water_urban",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.89292144143967,
|
| 17 |
+
"lat": 6.792629557847101
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
79.91556341166284,
|
| 23 |
+
6.815112597995069
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0083_hard_negative_water_urban_packet.png",
|
| 33 |
+
"sha256": "32f1bb61895f4e123f3db8a507272589771c558b7a4b79c0ca67ef06447c0d98",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0083_hard_negative_water_urban",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0083_hard_negative_water_urban/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0083_hard_negative_water_urban/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0083_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0083_hard_negative_water_urban/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0083_hard_negative_water_urban/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0083_hard_negative_water_urban/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "hard_negative_water_urban",
|
| 83 |
+
"packet_std": 107.6971,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": -920.9711,
|
| 91 |
+
"max": 21.0006,
|
| 92 |
+
"mean": -29.9959,
|
| 93 |
+
"median": 19.3658,
|
| 94 |
+
"p90": 20.5391
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 219093,
|
| 101 |
+
"min": 0.0156,
|
| 102 |
+
"max": 1394.4758,
|
| 103 |
+
"mean": 62.3114,
|
| 104 |
+
"median": 53.716,
|
| 105 |
+
"p90": 113.2741
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 8,
|
| 122 |
+
"major_roads": 1290,
|
| 123 |
+
"schools_waterpoints": 24,
|
| 124 |
+
"urban_landuse": 28793,
|
| 125 |
+
"water_surface": 2,
|
| 126 |
+
"waterways": 21
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "hard_negative_water_urban",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0089_hard_negative_water_urban_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0089_hard_negative_water_urban",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.85733615131299,
|
| 17 |
+
"lat": 6.916489461151531
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
79.83468829651993,
|
| 21 |
+
6.894006421003563,
|
| 22 |
+
79.87998400610606,
|
| 23 |
+
6.9389725012994985
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0089_hard_negative_water_urban_packet.png",
|
| 33 |
+
"sha256": "4dd0bd780ee56fdf6116827cd0bf797f14dfec6e9445295b2152c3dcd6bbfde7",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0089_hard_negative_water_urban",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0089_hard_negative_water_urban/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0089_hard_negative_water_urban/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0089_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0089_hard_negative_water_urban/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0089_hard_negative_water_urban/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0089_hard_negative_water_urban/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "hard_negative_water_urban",
|
| 83 |
+
"packet_std": 100.9352,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": -4976.7295,
|
| 91 |
+
"max": 17.3693,
|
| 92 |
+
"mean": -907.2552,
|
| 93 |
+
"median": -559.1439,
|
| 94 |
+
"p90": 16.6165
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 206626,
|
| 101 |
+
"min": 0.0054,
|
| 102 |
+
"max": 633.4416,
|
| 103 |
+
"mean": 90.9387,
|
| 104 |
+
"median": 53.2161,
|
| 105 |
+
"p90": 237.3633
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 66,
|
| 122 |
+
"major_roads": 3132,
|
| 123 |
+
"schools_waterpoints": 161,
|
| 124 |
+
"urban_landuse": 12367,
|
| 125 |
+
"water_surface": 33,
|
| 126 |
+
"waterways": 19
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 13,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "hard_negative_water_urban",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0090_hard_negative_water_urban_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0090_hard_negative_water_urban",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.98159880203448,
|
| 17 |
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"lat": 6.764275903497888
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
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|
| 23 |
+
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|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0090_hard_negative_water_urban_packet.png",
|
| 33 |
+
"sha256": "57950971e75856f329712573266649c1d779a24f53d683df50a53b3afff1bfaa",
|
| 34 |
+
"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0090_hard_negative_water_urban",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0090_hard_negative_water_urban/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0090_hard_negative_water_urban/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0090_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0090_hard_negative_water_urban/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0090_hard_negative_water_urban/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0090_hard_negative_water_urban/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
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"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "hard_negative_water_urban",
|
| 83 |
+
"packet_std": 110.898,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
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"min": 16.5918,
|
| 91 |
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"max": 22.9161,
|
| 92 |
+
"mean": 21.653,
|
| 93 |
+
"median": 21.9773,
|
| 94 |
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"p90": 22.5449
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 140476,
|
| 101 |
+
"min": 0.0731,
|
| 102 |
+
"max": 60.8467,
|
| 103 |
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"mean": 13.872,
|
| 104 |
+
"median": 10.9407,
|
| 105 |
+
"p90": 29.4002
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 3,
|
| 122 |
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"major_roads": 580,
|
| 123 |
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"schools_waterpoints": 1,
|
| 124 |
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|
| 125 |
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"water_surface": 4,
|
| 126 |
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"waterways": 24
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "hard_negative_water_urban",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0093_hard_negative_water_urban_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0093_hard_negative_water_urban",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
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"lon": 79.9458457724916,
|
| 17 |
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"lat": 6.941073926116221
|
| 18 |
+
},
|
| 19 |
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"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
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|
| 23 |
+
6.963556966264189
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0093_hard_negative_water_urban_packet.png",
|
| 33 |
+
"sha256": "0fb2f5454b0828a4907ef4825f9bdcc920d2be4f9808177697a91933af9518fd",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0093_hard_negative_water_urban",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0093_hard_negative_water_urban/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0093_hard_negative_water_urban/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0093_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0093_hard_negative_water_urban/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0093_hard_negative_water_urban/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0093_hard_negative_water_urban/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "hard_negative_water_urban",
|
| 83 |
+
"packet_std": 103.6635,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 18.3348,
|
| 91 |
+
"max": 21.4981,
|
| 92 |
+
"mean": 19.7817,
|
| 93 |
+
"median": 19.7686,
|
| 94 |
+
"p90": 20.857
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 150857,
|
| 101 |
+
"min": 0.0882,
|
| 102 |
+
"max": 104.8804,
|
| 103 |
+
"mean": 27.4669,
|
| 104 |
+
"median": 23.9982,
|
| 105 |
+
"p90": 55.281
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 6,
|
| 122 |
+
"major_roads": 1122,
|
| 123 |
+
"schools_waterpoints": 8,
|
| 124 |
+
"urban_landuse": 16700,
|
| 125 |
+
"water_surface": 55,
|
| 126 |
+
"waterways": 25
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "hard_negative_water_urban",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0099_hard_negative_water_urban_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0099_hard_negative_water_urban",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.97435949438882,
|
| 17 |
+
"lat": 6.745590993966157
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
79.95171973044584,
|
| 21 |
+
6.7231079538181895,
|
| 22 |
+
79.9969992583318,
|
| 23 |
+
6.768074034114125
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0099_hard_negative_water_urban_packet.png",
|
| 33 |
+
"sha256": "acb2ded13c5f77efcd6b1097ca1a5ec87e8af3895c52acbe79051538c0c8889e",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0099_hard_negative_water_urban",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0099_hard_negative_water_urban/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0099_hard_negative_water_urban/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0099_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0099_hard_negative_water_urban/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0099_hard_negative_water_urban/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0099_hard_negative_water_urban/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "hard_negative_water_urban",
|
| 83 |
+
"packet_std": 111.5314,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 10.8847,
|
| 91 |
+
"max": 22.416,
|
| 92 |
+
"mean": 19.8401,
|
| 93 |
+
"median": 20.8705,
|
| 94 |
+
"p90": 21.9057
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 38566,
|
| 101 |
+
"min": 0.09,
|
| 102 |
+
"max": 51.3068,
|
| 103 |
+
"mean": 12.7624,
|
| 104 |
+
"median": 9.3096,
|
| 105 |
+
"p90": 29.2336
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 0,
|
| 122 |
+
"major_roads": 487,
|
| 123 |
+
"schools_waterpoints": 0,
|
| 124 |
+
"urban_landuse": 10801,
|
| 125 |
+
"water_surface": 7,
|
| 126 |
+
"waterways": 16
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "hard_negative_water_urban",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0101_hard_negative_water_urban_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0101_hard_negative_water_urban",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.87946344472638,
|
| 17 |
+
"lat": 6.795380100148236
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
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|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0101_hard_negative_water_urban_packet.png",
|
| 33 |
+
"sha256": "22e09edf6a4579c51df9a27338d2aef0fa045127c01a02b6d723a2cd0746565b",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0101_hard_negative_water_urban",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0101_hard_negative_water_urban/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0101_hard_negative_water_urban/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0101_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0101_hard_negative_water_urban/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0101_hard_negative_water_urban/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0101_hard_negative_water_urban/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "hard_negative_water_urban",
|
| 83 |
+
"packet_std": 109.3139,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
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"min": -3616.1323,
|
| 91 |
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"max": 20.0951,
|
| 92 |
+
"mean": -712.4884,
|
| 93 |
+
"median": 18.6206,
|
| 94 |
+
"p90": 19.7303
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 167171,
|
| 101 |
+
"min": 0.1075,
|
| 102 |
+
"max": 1421.3829,
|
| 103 |
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"mean": 72.639,
|
| 104 |
+
"median": 67.4,
|
| 105 |
+
"p90": 131.0114
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 8,
|
| 122 |
+
"major_roads": 1088,
|
| 123 |
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"schools_waterpoints": 20,
|
| 124 |
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"urban_landuse": 23891,
|
| 125 |
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"water_surface": 5,
|
| 126 |
+
"waterways": 30
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "hard_negative_water_urban",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0102_hard_negative_water_urban_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0102_hard_negative_water_urban",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
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"lon": 79.895452488888,
|
| 17 |
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"lat": 6.836859020714745
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
6.859342060862713
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0102_hard_negative_water_urban_packet.png",
|
| 33 |
+
"sha256": "a1ef5b137961a964c2cde9c24a03cb5b9c6f9509c79f5d050e6f7692d3dc7f1b",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0102_hard_negative_water_urban",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0102_hard_negative_water_urban/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0102_hard_negative_water_urban/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0102_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0102_hard_negative_water_urban/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0102_hard_negative_water_urban/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0102_hard_negative_water_urban/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "hard_negative_water_urban",
|
| 83 |
+
"packet_std": 107.156,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": -413.0089,
|
| 91 |
+
"max": 20.8372,
|
| 92 |
+
"mean": 8.4898,
|
| 93 |
+
"median": 19.0592,
|
| 94 |
+
"p90": 20.1424
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 261693,
|
| 101 |
+
"min": 0.0345,
|
| 102 |
+
"max": 324.3814,
|
| 103 |
+
"mean": 47.5792,
|
| 104 |
+
"median": 43.6406,
|
| 105 |
+
"p90": 91.7897
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 28,
|
| 122 |
+
"major_roads": 2046,
|
| 123 |
+
"schools_waterpoints": 22,
|
| 124 |
+
"urban_landuse": 29341,
|
| 125 |
+
"water_surface": 33,
|
| 126 |
+
"waterways": 105
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "hard_negative_water_urban",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0108_hard_negative_water_urban_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0108_hard_negative_water_urban",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.91176977525366,
|
| 17 |
+
"lat": 6.9395831254263385
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
79.8891208112365,
|
| 21 |
+
6.917100085278371,
|
| 22 |
+
79.93441873927082,
|
| 23 |
+
6.962066165574306
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0108_hard_negative_water_urban_packet.png",
|
| 33 |
+
"sha256": "f7dca8eec80b63f497828dc3b720815824c8da29516583ac0d432c2bfd20677c",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0108_hard_negative_water_urban",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0108_hard_negative_water_urban/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0108_hard_negative_water_urban/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0108_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0108_hard_negative_water_urban/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0108_hard_negative_water_urban/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0108_hard_negative_water_urban/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "hard_negative_water_urban",
|
| 83 |
+
"packet_std": 96.4944,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
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"min": 17.1077,
|
| 91 |
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"max": 19.3126,
|
| 92 |
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"mean": 18.1407,
|
| 93 |
+
"median": 18.116,
|
| 94 |
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"p90": 18.8507
|
| 95 |
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},
|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
+
"valid_pixels": 195739,
|
| 101 |
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"min": 0.0882,
|
| 102 |
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"max": 256.2373,
|
| 103 |
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"mean": 61.767,
|
| 104 |
+
"median": 53.6908,
|
| 105 |
+
"p90": 120.9392
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 19,
|
| 122 |
+
"major_roads": 1589,
|
| 123 |
+
"schools_waterpoints": 25,
|
| 124 |
+
"urban_landuse": 25799,
|
| 125 |
+
"water_surface": 28,
|
| 126 |
+
"waterways": 44
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "hard_negative_water_urban",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0111_hard_negative_water_urban_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0111_hard_negative_water_urban",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.96907924710837,
|
| 17 |
+
"lat": 6.893104476867411
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
6.915587517015378
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0111_hard_negative_water_urban_packet.png",
|
| 33 |
+
"sha256": "82f026a00639909e9fd46c1733c5db8560fe09fdeb235c6da50feb1141eb593f",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0111_hard_negative_water_urban",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0111_hard_negative_water_urban/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0111_hard_negative_water_urban/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0111_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0111_hard_negative_water_urban/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0111_hard_negative_water_urban/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0111_hard_negative_water_urban/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "hard_negative_water_urban",
|
| 83 |
+
"packet_std": 104.8718,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 19.2043,
|
| 91 |
+
"max": 22.2152,
|
| 92 |
+
"mean": 20.6401,
|
| 93 |
+
"median": 20.6171,
|
| 94 |
+
"p90": 21.6065
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 262144,
|
| 101 |
+
"min": 0.1546,
|
| 102 |
+
"max": 138.1782,
|
| 103 |
+
"mean": 24.8318,
|
| 104 |
+
"median": 22.7327,
|
| 105 |
+
"p90": 44.1342
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 26,
|
| 122 |
+
"major_roads": 1479,
|
| 123 |
+
"schools_waterpoints": 19,
|
| 124 |
+
"urban_landuse": 11505,
|
| 125 |
+
"water_surface": 5,
|
| 126 |
+
"waterways": 42
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "hard_negative_water_urban",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0112_hard_negative_water_urban_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0112_hard_negative_water_urban",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 80.09934609277724,
|
| 17 |
+
"lat": 6.907791900332608
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
80.07669865475943,
|
| 21 |
+
6.88530886018464,
|
| 22 |
+
80.12199353079505,
|
| 23 |
+
6.930274940480576
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0112_hard_negative_water_urban_packet.png",
|
| 33 |
+
"sha256": "aede66e54e66d2347315527dd4356558bdf8284861704da8737079bc342457ac",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0112_hard_negative_water_urban",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0112_hard_negative_water_urban/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0112_hard_negative_water_urban/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0112_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0112_hard_negative_water_urban/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0112_hard_negative_water_urban/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0112_hard_negative_water_urban/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "hard_negative_water_urban",
|
| 83 |
+
"packet_std": 105.3977,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 20.1098,
|
| 91 |
+
"max": 27.1577,
|
| 92 |
+
"mean": 23.7793,
|
| 93 |
+
"median": 23.7005,
|
| 94 |
+
"p90": 25.6438
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 212704,
|
| 101 |
+
"min": 0.0201,
|
| 102 |
+
"max": 95.8275,
|
| 103 |
+
"mean": 8.6382,
|
| 104 |
+
"median": 5.5448,
|
| 105 |
+
"p90": 19.6618
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 2,
|
| 122 |
+
"major_roads": 393,
|
| 123 |
+
"schools_waterpoints": 4,
|
| 124 |
+
"urban_landuse": 4689,
|
| 125 |
+
"water_surface": 14,
|
| 126 |
+
"waterways": 8
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "hard_negative_water_urban",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0118_hard_negative_water_urban_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0118_hard_negative_water_urban",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.95860317673002,
|
| 17 |
+
"lat": 6.930478177611041
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
79.93595465048979,
|
| 21 |
+
6.9079951374630735,
|
| 22 |
+
79.98125170297025,
|
| 23 |
+
6.952961217759009
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0118_hard_negative_water_urban_packet.png",
|
| 33 |
+
"sha256": "b6b1150ea19ac5b5360cf2332be86af7beb04cf34232cb517467fc556ebd1fee",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0118_hard_negative_water_urban",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0118_hard_negative_water_urban/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0118_hard_negative_water_urban/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0118_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0118_hard_negative_water_urban/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0118_hard_negative_water_urban/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0118_hard_negative_water_urban/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "hard_negative_water_urban",
|
| 83 |
+
"packet_std": 104.4947,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 19.0681,
|
| 91 |
+
"max": 22.1106,
|
| 92 |
+
"mean": 20.6067,
|
| 93 |
+
"median": 20.612,
|
| 94 |
+
"p90": 21.6567
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 192905,
|
| 101 |
+
"min": 0.0964,
|
| 102 |
+
"max": 101.1987,
|
| 103 |
+
"mean": 27.1306,
|
| 104 |
+
"median": 25.2077,
|
| 105 |
+
"p90": 49.7087
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 11,
|
| 122 |
+
"major_roads": 1472,
|
| 123 |
+
"schools_waterpoints": 17,
|
| 124 |
+
"urban_landuse": 18613,
|
| 125 |
+
"water_surface": 43,
|
| 126 |
+
"waterways": 23
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "hard_negative_water_urban",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0124_hard_negative_water_urban_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0124_hard_negative_water_urban",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.8815771586762,
|
| 17 |
+
"lat": 6.842273156851853
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
6.864756196999821
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0124_hard_negative_water_urban_packet.png",
|
| 33 |
+
"sha256": "8bbfb1d96dd0dd84e7786f2e7afa596c3d50b9772b0dec75dfdbf3a5661b0342",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0124_hard_negative_water_urban",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0124_hard_negative_water_urban/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0124_hard_negative_water_urban/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0124_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0124_hard_negative_water_urban/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0124_hard_negative_water_urban/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0124_hard_negative_water_urban/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "hard_negative_water_urban",
|
| 83 |
+
"packet_std": 106.5084,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": -3192.8901,
|
| 91 |
+
"max": 20.0421,
|
| 92 |
+
"mean": -552.6923,
|
| 93 |
+
"median": 18.3851,
|
| 94 |
+
"p90": 19.3206
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 249016,
|
| 101 |
+
"min": 0.0368,
|
| 102 |
+
"max": 315.2314,
|
| 103 |
+
"mean": 65.273,
|
| 104 |
+
"median": 63.9206,
|
| 105 |
+
"p90": 120.8013
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 28,
|
| 122 |
+
"major_roads": 2292,
|
| 123 |
+
"schools_waterpoints": 51,
|
| 124 |
+
"urban_landuse": 38643,
|
| 125 |
+
"water_surface": 28,
|
| 126 |
+
"waterways": 82
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "hard_negative_water_urban",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0127_hard_negative_water_urban_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0127_hard_negative_water_urban",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.91371629843823,
|
| 17 |
+
"lat": 6.939041817532556
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
79.89106736046426,
|
| 21 |
+
6.916558777384588,
|
| 22 |
+
79.9363652364122,
|
| 23 |
+
6.961524857680524
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0127_hard_negative_water_urban_packet.png",
|
| 33 |
+
"sha256": "c574ed6fe86e0fa2d1cf645029a6fa296cf108ae379e70b90b04a045ea4c3356",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0127_hard_negative_water_urban",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0127_hard_negative_water_urban/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0127_hard_negative_water_urban/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0127_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0127_hard_negative_water_urban/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0127_hard_negative_water_urban/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0127_hard_negative_water_urban/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "hard_negative_water_urban",
|
| 83 |
+
"packet_std": 97.6664,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 17.1948,
|
| 91 |
+
"max": 19.4375,
|
| 92 |
+
"mean": 18.2189,
|
| 93 |
+
"median": 18.1801,
|
| 94 |
+
"p90": 18.9689
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 197770,
|
| 101 |
+
"min": 0.0882,
|
| 102 |
+
"max": 255.2785,
|
| 103 |
+
"mean": 59.6872,
|
| 104 |
+
"median": 51.8091,
|
| 105 |
+
"p90": 117.0512
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 17,
|
| 122 |
+
"major_roads": 1583,
|
| 123 |
+
"schools_waterpoints": 22,
|
| 124 |
+
"urban_landuse": 25213,
|
| 125 |
+
"water_surface": 27,
|
| 126 |
+
"waterways": 41
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "hard_negative_water_urban",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0128_hard_negative_water_urban_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0128_hard_negative_water_urban",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.99641771725837,
|
| 17 |
+
"lat": 6.944672342213906
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
79.97376850828891,
|
| 21 |
+
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|
| 22 |
+
80.01906692622782,
|
| 23 |
+
6.967155382361874
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0128_hard_negative_water_urban_packet.png",
|
| 33 |
+
"sha256": "94cfde7a0a0ec6a604079bcf6f17e05cf686a00c4aa26db77f1f2f12e7d1b0b4",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0128_hard_negative_water_urban",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0128_hard_negative_water_urban/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0128_hard_negative_water_urban/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0128_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0128_hard_negative_water_urban/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0128_hard_negative_water_urban/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0128_hard_negative_water_urban/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "hard_negative_water_urban",
|
| 83 |
+
"packet_std": 107.3664,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": 20.7933,
|
| 91 |
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"max": 23.2767,
|
| 92 |
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"mean": 22.0896,
|
| 93 |
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"median": 22.0931,
|
| 94 |
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"p90": 22.788
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
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"valid_pixels": 0
|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 111958,
|
| 101 |
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"min": 0.0379,
|
| 102 |
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"max": 96.5739,
|
| 103 |
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"mean": 19.8699,
|
| 104 |
+
"median": 17.4957,
|
| 105 |
+
"p90": 37.2516
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 5,
|
| 122 |
+
"major_roads": 908,
|
| 123 |
+
"schools_waterpoints": 11,
|
| 124 |
+
"urban_landuse": 12062,
|
| 125 |
+
"water_surface": 44,
|
| 126 |
+
"waterways": 14
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "hard_negative_water_urban",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0137_hard_negative_water_urban_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
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|
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|
|
|
|
|
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|
|
|
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|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0137_hard_negative_water_urban",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.8609941442413,
|
| 17 |
+
"lat": 6.861764458068844
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
6.884247498216812
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0137_hard_negative_water_urban_packet.png",
|
| 33 |
+
"sha256": "e22df0156a564255700ff556b784db79981f6fbb29250f1a3e0d117a163e4cd9",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0137_hard_negative_water_urban",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0137_hard_negative_water_urban/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0137_hard_negative_water_urban/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0137_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0137_hard_negative_water_urban/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0137_hard_negative_water_urban/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0137_hard_negative_water_urban/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "hard_negative_water_urban",
|
| 83 |
+
"packet_std": 107.141,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": -7316.6694,
|
| 91 |
+
"max": 18.6217,
|
| 92 |
+
"mean": -2897.168,
|
| 93 |
+
"median": -2726.7542,
|
| 94 |
+
"p90": 18.0003
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 144457,
|
| 101 |
+
"min": 0.0993,
|
| 102 |
+
"max": 365.3648,
|
| 103 |
+
"mean": 103.7188,
|
| 104 |
+
"median": 101.77,
|
| 105 |
+
"p90": 164.489
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 38,
|
| 122 |
+
"major_roads": 1738,
|
| 123 |
+
"schools_waterpoints": 58,
|
| 124 |
+
"urban_landuse": 28543,
|
| 125 |
+
"water_surface": 9,
|
| 126 |
+
"waterways": 9
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "hard_negative_water_urban",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0138_hard_negative_water_urban_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0138_hard_negative_water_urban",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 80.08521357748955,
|
| 17 |
+
"lat": 6.9096804990779015
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
80.06256604901833,
|
| 21 |
+
6.887197458929934,
|
| 22 |
+
80.10786110596078,
|
| 23 |
+
6.932163539225869
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0138_hard_negative_water_urban_packet.png",
|
| 33 |
+
"sha256": "54b3a325c7e094f4cbb89be54d62d4e14306f646737cc9d1ac82e2496a5afdbc",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0138_hard_negative_water_urban",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0138_hard_negative_water_urban/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0138_hard_negative_water_urban/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0138_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0138_hard_negative_water_urban/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0138_hard_negative_water_urban/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0138_hard_negative_water_urban/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "hard_negative_water_urban",
|
| 83 |
+
"packet_std": 101.8465,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 21.3265,
|
| 91 |
+
"max": 26.0934,
|
| 92 |
+
"mean": 23.7135,
|
| 93 |
+
"median": 23.5591,
|
| 94 |
+
"p90": 24.8874
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 176306,
|
| 101 |
+
"min": 0.0177,
|
| 102 |
+
"max": 94.5712,
|
| 103 |
+
"mean": 10.0818,
|
| 104 |
+
"median": 6.9004,
|
| 105 |
+
"p90": 23.1312
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 1,
|
| 122 |
+
"major_roads": 524,
|
| 123 |
+
"schools_waterpoints": 4,
|
| 124 |
+
"urban_landuse": 6435,
|
| 125 |
+
"water_surface": 14,
|
| 126 |
+
"waterways": 8
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "hard_negative_water_urban",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0141_hard_negative_water_urban_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0141_hard_negative_water_urban",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.89031417140347,
|
| 17 |
+
"lat": 6.996213885102639
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
79.86766247128615,
|
| 21 |
+
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|
| 22 |
+
79.9129658715208,
|
| 23 |
+
7.018696925250607
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0141_hard_negative_water_urban_packet.png",
|
| 33 |
+
"sha256": "63d35eff745cf1e630cb0febde3f03fa03abefea533455e5288128562af9635d",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0141_hard_negative_water_urban",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0141_hard_negative_water_urban/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0141_hard_negative_water_urban/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0141_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0141_hard_negative_water_urban/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0141_hard_negative_water_urban/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0141_hard_negative_water_urban/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "hard_negative_water_urban",
|
| 83 |
+
"packet_std": 70.8842,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
+
"min": -1444.3994,
|
| 91 |
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"max": 18.1231,
|
| 92 |
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"mean": -101.3874,
|
| 93 |
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"median": 17.725,
|
| 94 |
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"p90": 17.9552
|
| 95 |
+
},
|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 13110,
|
| 101 |
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"min": 0.0088,
|
| 102 |
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"max": 360.597,
|
| 103 |
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"mean": 105.0654,
|
| 104 |
+
"median": 70.4643,
|
| 105 |
+
"p90": 317.6273
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 10,
|
| 122 |
+
"major_roads": 1567,
|
| 123 |
+
"schools_waterpoints": 21,
|
| 124 |
+
"urban_landuse": 18685,
|
| 125 |
+
"water_surface": 4,
|
| 126 |
+
"waterways": 25
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "hard_negative_water_urban",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0142_hard_negative_water_urban_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0142_hard_negative_water_urban",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.95045040861221,
|
| 17 |
+
"lat": 6.912613139959284
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
79.92780273963353,
|
| 21 |
+
6.890130099811316,
|
| 22 |
+
79.97309807759089,
|
| 23 |
+
6.9350961801072515
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0142_hard_negative_water_urban_packet.png",
|
| 33 |
+
"sha256": "0e27001670bfe36b7a04355c11f8585c839e534df82ba7faf3ca35dd371d747c",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0142_hard_negative_water_urban",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0142_hard_negative_water_urban/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0142_hard_negative_water_urban/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0142_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0142_hard_negative_water_urban/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0142_hard_negative_water_urban/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0142_hard_negative_water_urban/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "hard_negative_water_urban",
|
| 83 |
+
"packet_std": 103.8992,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 18.589,
|
| 91 |
+
"max": 21.7935,
|
| 92 |
+
"mean": 20.0594,
|
| 93 |
+
"median": 20.0403,
|
| 94 |
+
"p90": 21.1382
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 262144,
|
| 101 |
+
"min": 0.3874,
|
| 102 |
+
"max": 154.4746,
|
| 103 |
+
"mean": 33.0905,
|
| 104 |
+
"median": 30.1603,
|
| 105 |
+
"p90": 58.8504
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 26,
|
| 122 |
+
"major_roads": 1906,
|
| 123 |
+
"schools_waterpoints": 24,
|
| 124 |
+
"urban_landuse": 17369,
|
| 125 |
+
"water_surface": 20,
|
| 126 |
+
"waterways": 55
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "hard_negative_water_urban",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0150_exposure_context_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0150_exposure_context",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.88492452181357,
|
| 17 |
+
"lat": 6.884456689251289
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
79.86227819933333,
|
| 21 |
+
6.861973649103321,
|
| 22 |
+
79.90757084429382,
|
| 23 |
+
6.906939729399257
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0150_exposure_context_packet.png",
|
| 33 |
+
"sha256": "d89c9fe8705ef04f1621801c0b82a403aad7f37d895d2e5f20e03a06e217a369",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0150_exposure_context",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0150_exposure_context/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0150_exposure_context/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0150_exposure_context/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0150_exposure_context/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0150_exposure_context/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0150_exposure_context/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "exposure_context",
|
| 83 |
+
"packet_std": 105.8011,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": -2522.8052,
|
| 91 |
+
"max": 18.6632,
|
| 92 |
+
"mean": -259.1784,
|
| 93 |
+
"median": 17.6807,
|
| 94 |
+
"p90": 18.107
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 262084,
|
| 101 |
+
"min": 0.0319,
|
| 102 |
+
"max": 275.0803,
|
| 103 |
+
"mean": 68.027,
|
| 104 |
+
"median": 60.226,
|
| 105 |
+
"p90": 124.3283
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 73,
|
| 122 |
+
"major_roads": 2917,
|
| 123 |
+
"schools_waterpoints": 123,
|
| 124 |
+
"urban_landuse": 23891,
|
| 125 |
+
"water_surface": 37,
|
| 126 |
+
"waterways": 57
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 2,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "exposure_context",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0152_exposure_context_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0152_exposure_context",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.86568011861495,
|
| 17 |
+
"lat": 6.927130120324292
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
79.8430317532053,
|
| 21 |
+
6.904647080176324,
|
| 22 |
+
79.8883284840246,
|
| 23 |
+
6.94961316047226
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0152_exposure_context_packet.png",
|
| 33 |
+
"sha256": "a4203b162868598c60e6d3e8760d64c6b19239a03800aba9d32526b2e6b9daef",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0152_exposure_context",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0152_exposure_context/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0152_exposure_context/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0152_exposure_context/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0152_exposure_context/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0152_exposure_context/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0152_exposure_context/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "exposure_context",
|
| 83 |
+
"packet_std": 103.5843,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": -3126.2449,
|
| 91 |
+
"max": 17.4404,
|
| 92 |
+
"mean": -496.0816,
|
| 93 |
+
"median": -225.3345,
|
| 94 |
+
"p90": 17.093
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 248331,
|
| 101 |
+
"min": 0.0074,
|
| 102 |
+
"max": 629.3065,
|
| 103 |
+
"mean": 119.9106,
|
| 104 |
+
"median": 82.5487,
|
| 105 |
+
"p90": 278.5361
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 60,
|
| 122 |
+
"major_roads": 3434,
|
| 123 |
+
"schools_waterpoints": 158,
|
| 124 |
+
"urban_landuse": 15004,
|
| 125 |
+
"water_surface": 35,
|
| 126 |
+
"waterways": 31
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 14,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "exposure_context",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/colombo_dengue/colombo_dengue_s0153_exposure_context_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "colombo_dengue_s0153_exposure_context",
|
| 6 |
+
"aoi_id": "colombo_dengue",
|
| 7 |
+
"split": "validation",
|
| 8 |
+
"disease_module": "dengue_aedes",
|
| 9 |
+
"primary_disease": "dengue",
|
| 10 |
+
"country": "Sri Lanka",
|
| 11 |
+
"name": "Colombo District, Sri Lanka",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 79.98827382111182,
|
| 17 |
+
"lat": 6.949024251083345
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
79.96562440253196,
|
| 21 |
+
6.926541210935377,
|
| 22 |
+
80.01092323969168,
|
| 23 |
+
6.971507291231313
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/colombo_dengue/colombo_dengue_s0153_exposure_context_packet.png",
|
| 33 |
+
"sha256": "1c18148140ed833644584943a13ef1cac2a5a441ebc080c3a51971182be9949f",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/colombo_dengue/colombo_dengue_s0153_exposure_context",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/colombo_dengue/colombo_dengue_s0153_exposure_context/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/colombo_dengue/colombo_dengue_s0153_exposure_context/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/colombo_dengue/colombo_dengue_s0153_exposure_context/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0153_exposure_context/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/colombo_dengue/colombo_dengue_s0153_exposure_context/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/colombo_dengue/colombo_dengue_s0153_exposure_context/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/colombo_sri_lanka/colombo_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/colombo_sri_lanka/colombo_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/colombo_sri_lanka/colombo_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/colombo_sri_lanka/osm_health_facilities_colombo.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/colombo_sri_lanka/osm_major_roads_colombo.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/colombo_sri_lanka/osm_schools_waterpoints_colombo.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/colombo_sri_lanka/osm_urban_landuse_colombo.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/colombo_sri_lanka/osm_water_surface_colombo.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/colombo_sri_lanka/osm_waterways_colombo.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_vector": [
|
| 66 |
+
"data/raw/map_gbif/colombo_sri_lanka/gbif_aedes_colombo_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/colombo_dengue_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 75.598013,
|
| 78 |
+
"sentinel_datetime": "2025-11-07T05:17:13Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "exposure_context",
|
| 83 |
+
"packet_std": 108.2769,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 20.2866,
|
| 91 |
+
"max": 22.9875,
|
| 92 |
+
"mean": 21.7057,
|
| 93 |
+
"median": 21.7283,
|
| 94 |
+
"p90": 22.4352
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 85376,
|
| 101 |
+
"min": 0.0379,
|
| 102 |
+
"max": 98.9429,
|
| 103 |
+
"mean": 20.9423,
|
| 104 |
+
"median": 18.5442,
|
| 105 |
+
"p90": 39.0603
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 3,
|
| 122 |
+
"major_roads": 882,
|
| 123 |
+
"schools_waterpoints": 11,
|
| 124 |
+
"urban_landuse": 12507,
|
| 125 |
+
"water_surface": 32,
|
| 126 |
+
"waterways": 14
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 0,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "hard_or_ecological_negative",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "exposure_context",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|