app/test_clinical_ner.py

from clinical_ner import ClinicalNER

# Initialize the NER system
ner = ClinicalNER()

# Sample clinical text
text = "Patient presents with hypertension and diabetes. Prescribed metformin 500mg."

# Get basic NER annotations
print("Basic NER:")
results = ner.basic_ner(text)
for entity in results:
    print(f"  {entity['word']} -> {entity['entity_group']} (score: {entity['score']:.4f})")

print("\n" + "="*60 + "\n")

# Get Prolog facts
print("Prolog NER:")
prolog_output = ner.prolog_ner(text)
print(prolog_output)