Update app.py

app.py

@@ -240,12 +240,17 @@ def predictmic(sequence):
 
 
 def full_prediction(sequence):
+    print("[CHECKPOINT] full_prediction called", flush=True)
     features = extract_features(sequence)
     if isinstance(features, str):
+        print("[CHECKPOINT] extract_features returned error:", features, flush=True)
         return features
+    print("[CHECKPOINT] features extracted OK, shape:", features.shape, flush=True)
 
     amp_model, _ = get_amp_model()
+    print("[CHECKPOINT] AMP model loaded, running predict...", flush=True)
     raw_pred = amp_model.predict(features, verbose=0)
+    print("[CHECKPOINT] AMP predict done:", raw_pred, flush=True)
 
     if raw_pred.ndim == 1 or raw_pred.shape[1] == 1:
         prob_amp = float(raw_pred.flatten()[0])  # sigmoid output assumed = P(AMP)
@@ -265,7 +270,9 @@ def full_prediction(sequence):
     result = f"Prediction: {amp_result}\nConfidence: {confidence}%\n"
 
     if prediction == 1:
+        print("[CHECKPOINT] AMP detected, starting MIC (ProtBert)...", flush=True)
         mic_values = predictmic(sequence)
+        print("[CHECKPOINT] MIC done:", mic_values, flush=True)
         result += "\nPredicted MIC Values (μM):\n"
         for org, mic in mic_values.items():
             result += f"- {org}: {mic}\n"