ahmed taha commited on
Upload sample_pairs.py with huggingface_hub
Browse files- sample_pairs.py +85 -0
sample_pairs.py
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from __future__ import annotations
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import argparse
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import json
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import random
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from collections import defaultdict
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from pathlib import Path
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def classify_transformation(pair: dict) -> str:
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age_changed = pair.get("source_age") != pair.get("target_age")
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sex_changed = pair.get("source_sex") != pair.get("target_sex")
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if age_changed and sex_changed:
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return "intersectional"
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if age_changed:
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return "age_only"
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if sex_changed:
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return "sex_only"
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return "none"
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def stratified_sample(
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pairs: list[dict],
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n_per_stratum: int,
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seed: int,
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) -> list[int]:
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rng = random.Random(seed)
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by_stratum: dict[str, list[int]] = defaultdict(list)
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for i, pair in enumerate(pairs):
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stratum = classify_transformation(pair)
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if stratum != "none":
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by_stratum[stratum].append(i)
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selected: list[int] = []
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for stratum in ["age_only", "sex_only", "intersectional"]:
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pool = by_stratum[stratum]
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rng.shuffle(pool)
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n = min(n_per_stratum, len(pool))
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selected.extend(pool[:n])
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if n < n_per_stratum:
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print(
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f"Warning: only {n} pairs available for {stratum} "
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f"(requested {n_per_stratum})"
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)
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return selected
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def main() -> None:
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parser = argparse.ArgumentParser(
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description="Stratified sampling of pairs for radiologist validation"
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)
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parser.add_argument("--pairs", type=str, required=True)
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parser.add_argument("--n-per-stratum", type=int, default=150)
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parser.add_argument("--seed", type=int, default=42)
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parser.add_argument("--output", type=str, default="data/pairs.json")
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args = parser.parse_args()
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with open(args.pairs) as f:
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all_pairs = json.load(f)
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indices = stratified_sample(all_pairs, args.n_per_stratum, args.seed)
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sampled = [all_pairs[i] for i in indices]
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for pair in sampled:
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pair["_transform_type"] = classify_transformation(pair)
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counts: dict[str, int] = defaultdict(int)
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for pair in sampled:
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counts[pair["_transform_type"]] += 1
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output_path = Path(args.output)
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output_path.parent.mkdir(parents=True, exist_ok=True)
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with open(output_path, "w") as f:
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json.dump(sampled, f, indent=2)
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print(f"Sampled {len(sampled)} pairs from {len(all_pairs)} total")
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for stratum, count in sorted(counts.items()):
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print(f" {stratum}: {count}")
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print(f"Saved to: {output_path}")
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if __name__ == "__main__":
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main()
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