Relicense to MIT; update model card
Browse files
README.md
CHANGED
|
@@ -1,5 +1,5 @@
|
|
| 1 |
---
|
| 2 |
-
license:
|
| 3 |
library_name: bpnet
|
| 4 |
tags:
|
| 5 |
- bpnet
|
|
@@ -36,10 +36,10 @@ For more information about the models, see:
|
|
| 36 |
- Experiment: [ENCSR795CKZ](https://www.encodeproject.org/experiments/ENCSR795CKZ/)
|
| 37 |
- Model annotation: [ENCSR128AHG](https://www.encodeproject.org/annotations/ENCSR128AHG/)
|
| 38 |
- Biosample: HepG2 (Full name: Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens ZSCAN30)
|
| 39 |
-
- Cell slim(s):
|
| 40 |
-
- Organ slim(s):
|
| 41 |
- Developmental slim(s): endoderm
|
| 42 |
-
- System slim(s):
|
| 43 |
- Assembly: hg38
|
| 44 |
|
| 45 |
## QC
|
|
@@ -130,8 +130,8 @@ predictions = model.predict([
|
|
| 130 |
|
| 131 |
## License & citation
|
| 132 |
|
| 133 |
-
|
| 134 |
-
ENCODE data without restrictions.
|
| 135 |
|
| 136 |
-
|
| 137 |
-
|
|
|
|
|
|
| 1 |
---
|
| 2 |
+
license: mit
|
| 3 |
library_name: bpnet
|
| 4 |
tags:
|
| 5 |
- bpnet
|
|
|
|
| 36 |
- Experiment: [ENCSR795CKZ](https://www.encodeproject.org/experiments/ENCSR795CKZ/)
|
| 37 |
- Model annotation: [ENCSR128AHG](https://www.encodeproject.org/annotations/ENCSR128AHG/)
|
| 38 |
- Biosample: HepG2 (Full name: Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens ZSCAN30)
|
| 39 |
+
- Cell slim(s): cancer cell, epithelial cell
|
| 40 |
+
- Organ slim(s): epithelium, exocrine gland, endocrine gland, liver
|
| 41 |
- Developmental slim(s): endoderm
|
| 42 |
+
- System slim(s): digestive system, endocrine system, exocrine system
|
| 43 |
- Assembly: hg38
|
| 44 |
|
| 45 |
## QC
|
|
|
|
| 130 |
|
| 131 |
## License & citation
|
| 132 |
|
| 133 |
+
Released under the MIT license.
|
|
|
|
| 134 |
|
| 135 |
+
The models are derived from ENCODE data (unrestricted use under the ENCODE
|
| 136 |
+
data-use policy). Please cite the ENCODE Project Consortium and the model
|
| 137 |
+
software: BPNet (Avsec et al., Nat Genet 2021).
|