File size: 3,704 Bytes
e45e5e5
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
{
  "_name_or_path": "microsoft/BiomedNLP-PubMedBERT-base-uncased-abstract-fulltext",
  "architectures": [
    "BertForTokenClassification"
  ],
  "attention_probs_dropout_prob": 0.1,
  "classifier_dropout": null,
  "hidden_act": "gelu",
  "hidden_dropout_prob": 0.1,
  "hidden_size": 768,
  "id2label": {
    "0": "B-Organism_subdivision",
    "1": "I-Pathological_formation",
    "2": "I-Anatomical_system",
    "3": "B-Immaterial_anatomical_entity",
    "4": "I-GGP",
    "5": "I-Organism",
    "6": "I-CL",
    "7": "B-Organism",
    "8": "B-DNA",
    "9": "I-Gene_or_gene_product",
    "10": "I-Tissue",
    "11": "B-Developing_anatomical_structure",
    "12": "I-RNA",
    "13": "I-CHEBI",
    "14": "B-Multi-tissue_structure",
    "15": "I-DNA",
    "16": "B-GO",
    "17": "O",
    "18": "B-Cell",
    "19": "I-Multi-tissue_structure",
    "20": "B-cell_type",
    "21": "I-Immaterial_anatomical_entity",
    "22": "B-RNA",
    "23": "B-Cancer",
    "24": "I-Organism_subdivision",
    "25": "B-protein",
    "26": "B-Chemical",
    "27": "I-protein",
    "28": "I-Simple_chemical",
    "29": "I-Disease",
    "30": "I-Cellular_component",
    "31": "I-Chemical",
    "32": "B-Amino_acid",
    "33": "I-Organism_substance",
    "34": "I-Developing_anatomical_structure",
    "35": "I-SO",
    "36": "I-cell_type",
    "37": "B-Tissue",
    "38": "B-Organism_substance",
    "39": "B-GGP",
    "40": "B-cell_line",
    "41": "B-CHEBI",
    "42": "B-Organ",
    "43": "B-Gene_or_gene_product",
    "44": "I-Amino_acid",
    "45": "B-Taxon",
    "46": "I-GO",
    "47": "I-Organ",
    "48": "I-cell_line",
    "49": "I-Cancer",
    "50": "I-Cell",
    "51": "B-SO",
    "52": "B-Anatomical_system",
    "53": "B-CL",
    "54": "B-Simple_chemical",
    "55": "B-Disease",
    "56": "I-Taxon",
    "57": "B-Cellular_component",
    "58": "B-Pathological_formation"
  },
  "initializer_range": 0.02,
  "intermediate_size": 3072,
  "label2id": {
    "B-Amino_acid": 32,
    "B-Anatomical_system": 52,
    "B-CHEBI": 41,
    "B-CL": 53,
    "B-Cancer": 23,
    "B-Cell": 18,
    "B-Cellular_component": 57,
    "B-Chemical": 26,
    "B-DNA": 8,
    "B-Developing_anatomical_structure": 11,
    "B-Disease": 55,
    "B-GGP": 39,
    "B-GO": 16,
    "B-Gene_or_gene_product": 43,
    "B-Immaterial_anatomical_entity": 3,
    "B-Multi-tissue_structure": 14,
    "B-Organ": 42,
    "B-Organism": 7,
    "B-Organism_subdivision": 0,
    "B-Organism_substance": 38,
    "B-Pathological_formation": 58,
    "B-RNA": 22,
    "B-SO": 51,
    "B-Simple_chemical": 54,
    "B-Taxon": 45,
    "B-Tissue": 37,
    "B-cell_line": 40,
    "B-cell_type": 20,
    "B-protein": 25,
    "I-Amino_acid": 44,
    "I-Anatomical_system": 2,
    "I-CHEBI": 13,
    "I-CL": 6,
    "I-Cancer": 49,
    "I-Cell": 50,
    "I-Cellular_component": 30,
    "I-Chemical": 31,
    "I-DNA": 15,
    "I-Developing_anatomical_structure": 34,
    "I-Disease": 29,
    "I-GGP": 4,
    "I-GO": 46,
    "I-Gene_or_gene_product": 9,
    "I-Immaterial_anatomical_entity": 21,
    "I-Multi-tissue_structure": 19,
    "I-Organ": 47,
    "I-Organism": 5,
    "I-Organism_subdivision": 24,
    "I-Organism_substance": 33,
    "I-Pathological_formation": 1,
    "I-RNA": 12,
    "I-SO": 35,
    "I-Simple_chemical": 28,
    "I-Taxon": 56,
    "I-Tissue": 10,
    "I-cell_line": 48,
    "I-cell_type": 36,
    "I-protein": 27,
    "O": 17
  },
  "layer_norm_eps": 1e-12,
  "max_position_embeddings": 512,
  "model_type": "bert",
  "num_attention_heads": 12,
  "num_hidden_layers": 12,
  "pad_token_id": 0,
  "position_embedding_type": "absolute",
  "transformers_version": "4.34.0",
  "type_vocab_size": 2,
  "use_cache": true,
  "vocab_size": 30522
}