# /// script # requires-python = ">=3.10" # dependencies = [ # "embedding-atlas>=0.19.1", # "datasets", # "cuml-cu12>=25.10", # "accelerate", # "torch>=2.4", # ] # # [tool.uv] # # The NVIDIA index also hosts stale torch wheels; best-match keeps torch on PyPI # # while cuml still resolves from the NVIDIA index. # index-strategy = "unsafe-best-match" # # [[tool.uv.index]] # url = "https://pypi.nvidia.com" # /// """Build an Embedding Atlas visualization with GPU-accelerated UMAP. Runs embedding-atlas with cuml.accel for ~50x faster UMAP on GPU. Designed to run as an HF Job with a bucket volume mount for output. Examples: # From a prepped parquet in a bucket hf jobs uv run --flavor a100-large \\ -v hf://buckets/user/atlas-data:/output \\ -s HF_TOKEN --timeout 2h \\ atlas-build-gpu.py /output/books.parquet \\ --text title --sample 2000000 --name my-atlas # From an HF dataset hf jobs uv run --flavor a100-large \\ -v hf://buckets/user/atlas-data:/output \\ -s HF_TOKEN --timeout 2h \\ atlas-build-gpu.py stanfordnlp/imdb \\ --text text --split train --name imdb-atlas The bucket is mounted at /output, not /data: Jobs reserves /data for the uploaded script artifact when you pass a local script path. """ import argparse import json import os import sys import time def main(): parser = argparse.ArgumentParser(description="Build an Embedding Atlas with GPU UMAP") parser.add_argument("input", help="Parquet path or HF dataset ID") parser.add_argument("--name", required=True, help="Atlas name (output subdirectory)") parser.add_argument("--text", default="text", help="Text column name") parser.add_argument("--image", default=None, help="Image column name") parser.add_argument("--split", default=None, help="Dataset split") parser.add_argument("--sample", type=int, default=None, help="Number of rows to sample") parser.add_argument("--batch-size", type=int, default=256, help="Embedding batch size") parser.add_argument("--model", default=None, help="Embedding model name") parser.add_argument("--output-dir", default="/output", help="Base output directory") parser.add_argument("--allow-cpu", action="store_true", help="Run without a GPU (slow: CPU embedding + CPU UMAP)") args = parser.parse_args() atlas_output = os.path.join(args.output_dir, args.name) config_path = os.path.join(atlas_output, "atlas-config.json") print(f"Input: {args.input}") print(f"Name: {args.name}") print(f"Output: {atlas_output}") print(f"Sample: {args.sample}") print(f"Batch size: {args.batch_size}") gpu_info = {} try: import torch cuda_available = torch.cuda.is_available() except ImportError: cuda_available = False if cuda_available: gpu_info["gpu"] = torch.cuda.get_device_name() print(f"GPU: {gpu_info['gpu']}") elif not args.allow_cpu: print("ERROR: no CUDA GPU available. Run on a GPU flavor, or pass --allow-cpu " "to accept a much slower CPU build.") sys.exit(1) else: print("WARNING: no GPU — running embedding and UMAP on CPU (--allow-cpu)") # cuml.accel patches umap-learn so embedding-atlas's UMAP runs on GPU. It must be # installed in-process *before* embedding_atlas imports umap — an env var or a plain # subprocess does not engage it. if cuda_available: try: import cuml.accel cuml.accel.install() import cuml gpu_info["cuml_version"] = cuml.__version__ print(f"cuml.accel installed (cuML {cuml.__version__}) — UMAP will run on GPU") except Exception as e: print(f"WARNING: cuml.accel unavailable ({e}) — UMAP falls back to CPU") from embedding_atlas.cli import main as atlas_cli cli_args = [args.input, "--text", args.text, "--batch-size", str(args.batch_size), "--export-application", atlas_output] if args.image: cli_args.extend(["--image", args.image]) if args.model: cli_args.extend(["--model", args.model]) if args.split: cli_args.extend(["--split", args.split]) if args.sample: cli_args.extend(["--sample", str(args.sample)]) print(f"\nRunning: embedding-atlas {' '.join(cli_args)}\n") start = time.time() returncode = 0 try: atlas_cli(args=cli_args) except SystemExit as e: returncode = e.code if isinstance(e.code, int) else (0 if e.code is None else 1) elapsed = time.time() - start if returncode != 0: print(f"\nFailed with exit code {returncode} after {elapsed:.1f}s") sys.exit(returncode) # Write config sidecar for atlas-deploy.py parquet_path = os.path.join(atlas_output, "data", "dataset.parquet") parquet_mb = os.path.getsize(parquet_path) / (1024**2) if os.path.exists(parquet_path) else 0 config = { "name": args.name, "text_column": args.text, "image_column": args.image, "model": args.model, "sample": args.sample, "input": args.input, "parquet_size_mb": round(parquet_mb, 1), "build_time_seconds": round(elapsed, 1), "gpu_info": gpu_info, } os.makedirs(os.path.dirname(config_path), exist_ok=True) with open(config_path, "w") as f: json.dump(config, f, indent=2) print(f"\nCompleted in {elapsed:.1f}s") print(f"Parquet: {parquet_mb:.1f} MB") print(f"Config: {config_path}") if __name__ == "__main__": main()