pdb,Hchain,Lchain,model,antigen_chain,antigen_type,antigen_het_name,antigen_name,short_header,date,compound,organism,heavy_species,light_species,antigen_species,authors,resolution,method,r_free,r_factor,scfv,engineered,heavy_subclass,light_subclass,light_ctype,affinity,delta_g,affinity_method,temperature,pmid,complex_id,has_skempi
7v05,K,k,0,X,protein,,circumsporozoite protein,"ANTIMICROBIAL PROTEIN,IMMUNE SYSTEM/CELL INVASION",11/23/22,Complex of Plasmodium falciparum circumsporozoite protein with 850 Fab,Mus musculus; Plasmodium falciparum,mus musculus,mus musculus,plasmodium falciparum,"Kucharska, I., Prieto, K., Rubinstein, J.L., Julien, J.P.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7v05_K_k_X,False
7z3a,K,P,0,C,protein,,amc009 sosipv5.2 envelope glycoprotein gp120,VIRAL PROTEIN,01/08/09,AMC009 SOSIPv5.2 in complex with Fabs ACS101 and ACS124,Homo sapiens; Human immunodeficiency virus 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"van Schooten, J., Ward, A.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV2,Lambda,,,,,,7z3a_K_P_C,False
7z3a,M,O,0,B,protein,,amc009 sosip.v5.2 envelope glycoprotein gp41,VIRAL PROTEIN,01/08/09,AMC009 SOSIPv5.2 in complex with Fabs ACS101 and ACS124,Homo sapiens; Human immunodeficiency virus 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"van Schooten, J., Ward, A.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGLV3,Lambda,,,,,,7z3a_M_O_B,False
7upd,C,F,0,G,protein,,fusion glycoprotein f0,VIRAL PROTEIN/Immune System,03/29/23,Prefusion-stabilized Nipah virus fusion protein complexed with Fab 2B12,Mus musculus; Nipah henipavirus,mus musculus,mus musculus,nipah henipavirus,"Byrne, P.O., McLellan, J.S.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV10,IGKV8,Kappa,,,,,,7upd_C_F_G,False
7u0p,D,I,0,B,protein,,spike glycoprotein,VIRAL PROTEIN,01/08/09,SARS-Cov2 S protein structure in complex with neutralizing monoclonal antibody 002-S21F2,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Patel, A., Ortlund, E.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGKV1,Kappa,,,,,,7u0p_D_I_B,False
8a1e,D,E,0,A,protein,,glycoprotein,VIRAL PROTEIN,08/17/22,Rabies virus glycoprotein in complex with Fab fragments of 17C7 and 1112-1 neutralizing antibodies,Homo sapiens; Mus musculus; Rabies virus strain Pasteur vaccin,homo sapiens,homo sapiens,rabies virus strain pasteur vaccin,"Ng, W.M., Fedosyuk, S., English, S., Augusto, G., Berg, A., Thorley, L., Haselon, A.S., Segireddy, R.R., Bowden, T.A., Douglas, A.D.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV3,Kappa,,,,,,8a1e_D_E_A,False
7zbu,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN,08/17/22,CryoEM structure of SARS-CoV-2 spike monomer in complex with neutralising antibody P008_60,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Rosa, A., Pye, V.E., Cronin, N., Cherepanov, P.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV3,Kappa,,,,,,7zbu_H_L_A,False
7xw7,A,B,0,R,protein,,thyrotropin receptor,MEMBRANE PROTEIN,08/17/22,TSHR-K1-70 complex,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Duan, J., Xu, P., Luan, X., Ji, Y., Yuan, Q., He, X., Ye, J., Cheng, X., Jiang, H., Zhang, S., Jiang, Y., Xu, H.E.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGLV1,Lambda,,,,,,7xw7_A_B_R,False
7upk,H,L,0,D,protein,,fusion glycoprotein f0,VIRAL PROTEIN/Immune System,03/29/23,Prefusion-stabilized Nipah virus fusion protein complexed with Fab 1A9,Mus musculus; Nipah henipavirus,mus musculus,mus musculus,nipah henipavirus,"Byrne, P.O., McLellan, J.S.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV13,Kappa,,,,,,7upk_H_L_D,False
7x7t,C,D,0,G,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,08/17/22,"Cryo-EM structure of SARS-CoV-2 spike protein in complex with three nAbs X01, X10 and X17",Mus musculus; Severe acute respiratory syndrome coronavirus 2,mus musculus,mus musculus,severe acute respiratory syndrome coronavirus2 ,"Sun, H., Liu, L., Zheng, Q., Li, S., Zhang, T., Xia, N.",0.0,ELECTRON MICROSCOPY,,,False,False,IGHV1,IGKV13,Kappa,,,,,,7x7t_C_D_G,False
7x7t,A,B,0,G,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,08/17/22,"Cryo-EM structure of SARS-CoV-2 spike protein in complex with three nAbs X01, X10 and X17",Mus musculus; Severe acute respiratory syndrome coronavirus 2,mus musculus,mus musculus,severe acute respiratory syndrome coronavirus2 ,"Sun, H., Liu, L., Zheng, Q., Li, S., Zhang, T., Xia, N.",0.0,ELECTRON MICROSCOPY,,,False,False,IGHV1,IGKV10,Kappa,,,,,,7x7t_A_B_G,False
7x7t,H,L,0,G,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,08/17/22,"Cryo-EM structure of SARS-CoV-2 spike protein in complex with three nAbs X01, X10 and X17",Mus musculus; Severe acute respiratory syndrome coronavirus 2,mus musculus,mus musculus,severe acute respiratory syndrome coronavirus2 ,"Sun, H., Liu, L., Zheng, Q., Li, S., Zhang, T., Xia, N.",0.0,ELECTRON MICROSCOPY,,,False,False,IGHV1,IGKV3,Kappa,,,,,,7x7t_H_L_G,False
7usl,H,L,0,C,protein,,bifunctional hemolysin-adenylate cyclase,TOXIN,08/17/22,Integrin alphaM/beta2 ectodomain in complex with adenylate cyclase toxin RTX751 and M1F5 Fab,Bordetella pertussis; Homo sapiens,homo sapiens,homo sapiens,bordetella pertussis,"Goldsmith, J.A., McLellan, J.S.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV10,Kappa,,,,,,7usl_H_L_C,False
8a1e,B,C,0,A,protein,,glycoprotein,VIRAL PROTEIN,08/17/22,Rabies virus glycoprotein in complex with Fab fragments of 17C7 and 1112-1 neutralizing antibodies,Homo sapiens; Mus musculus; Rabies virus strain Pasteur vaccin,mus musculus,mus musculus,rabies virus strain pasteur vaccin,"Ng, W.M., Fedosyuk, S., English, S., Augusto, G., Berg, A., Thorley, L., Haselon, A.S., Segireddy, R.R., Bowden, T.A., Douglas, A.D.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV6,Kappa,,,,,,8a1e_B_C_A,False
7upb,H,L,0,G,protein,,fusion glycoprotein f0,VIRAL PROTEIN/Immune System,03/29/23,Prefusion-stabilized Nipah virus fusion protein complexed with Fab 1H1,Mus musculus; Nipah henipavirus,mus musculus,mus musculus,nipah henipavirus,"Byrne, P.O., McLellan, J.S.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV12,Kappa,,,,,,7upb_H_L_G,False
7upx,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN,08/10/22,Three RBD-down state of SARS-CoV-2 D614G spike in complex with the SP1-77 neutralizing antibody Fab fragment (local refinement of the RBD and Fab variable domains),Homo sapiens; Mus musculus; Severe acute respiratory syndrome coronavirus,"homo sapiens, mus musculus","homo sapiens, mus musculus",severe acute respiratory syndrome coronavirus,"Zhang, J., Luo, S., Kreutzberger, A., Kirchhausen, T., Chen, B., Haynes, B., Alt, F.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,7upx_H_L_A,False
7qti,I,J,0,D,protein,,"spike glycoprotein,envelope glycoprotein",VIRAL PROTEIN,08/03/22,SARS-CoV-2 S Omicron Spike B.1.1.529 - 3-P2G3 and 1-P5C3 Fabs (Global),Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Ni, D., Lau, K., Turelli, P., Fenwick, C., Perez, L., Pojer, F., Stahlberg, H., Pantaleo, G., Trono, D.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7qti_I_J_D,False
7qti,F,E,0,A,protein,,"spike glycoprotein,envelope glycoprotein",VIRAL PROTEIN,08/03/22,SARS-CoV-2 S Omicron Spike B.1.1.529 - 3-P2G3 and 1-P5C3 Fabs (Global),Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Ni, D., Lau, K., Turelli, P., Fenwick, C., Perez, L., Pojer, F., Stahlberg, H., Pantaleo, G., Trono, D.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,7qti_F_E_A,False
7t9n,H,L,0,R,protein,,thyrotropin receptor,MEMBRANE PROTEIN,08/03/22,M22 Agonist Autoantibody bound to Human Thyrotropin receptor in complex with miniGs399 (composite structure),Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Faust, B., Cheng, Y., Manglik, A.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGLV1,Lambda,,,,,,7t9n_H_L_R,False
8cw9,N,O,0,F,protein,,fusion glycoprotein f0,VIRAL PROTEIN/Immune System,08/10/22,Prefusion-stabilized hMPV fusion protein bound to ADI-61026 and MPE8 Fabs,Homo sapiens; Human metapneumovirus,homo sapiens,homo sapiens,human metapneumovirus,"Hsieh, C.-L., McLellan, J.S.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV1,Lambda,,,,,,8cw9_N_O_F,False
8cw9,I,K,0,E,protein,,fusion glycoprotein f0,VIRAL PROTEIN/Immune System,08/10/22,Prefusion-stabilized hMPV fusion protein bound to ADI-61026 and MPE8 Fabs,Homo sapiens; Human metapneumovirus,homo sapiens,homo sapiens,human metapneumovirus,"Hsieh, C.-L., McLellan, J.S.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV2,IGLV3,Lambda,,,,,,8cw9_I_K_E,False
7upa,H,L,0,A,protein,,fusion glycoprotein f0,VIRAL PROTEIN/Immune System,01/08/09,Prefusion-stabilized Nipah virus fusion protein complexed with Fab 1H8,Mus musculus; Nipah henipavirus,mus musculus,mus musculus,nipah henipavirus,"Byrne, P.O., McLellan, J.S.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV10,Kappa,,,,,,7upa_H_L_A,False
7wcd,A,B,0,C,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,08/10/22,Cryo EM structure of SARS-CoV-2 spike in complex with TAU-2212 mAbs in conformation 4,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Xiang, Y., Ma, B., Li, R.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV2,Lambda,,,,,,7wcd_A_B_C,False
7v27,B,A,0,C,protein,,spike protein s1,VIRAL PROTEIN,08/10/22,RBD/XG005 local refinement,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhan, W.Q., Zhang, X., Sun, L., Chen, Z.G.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV2,IGLV2,Lambda,,,,,,7v27_B_A_C,False
7v24,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN,08/10/22,Local CryoEM structure of del68-76/del679-688 prefusion-stabilized spike in complex with the Fab of N12-9,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Du, S., Xiao, J.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV3,Lambda,,,,,,7v24_H_L_A,False
8d7e,F,G,0,C,protein,,ciliary neurotrophic factor receptor subunit alpha,CYTOKINE/Immune System,03/29/23,Cryo-EM structure of human CNTFR alpha in complex with the Fab fragments of two antibodies,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Zhou, Y., Franklin, M.C.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV3,Kappa,,,,,,8d7e_F_G_C,False
8d7e,D,E,0,C,protein,,ciliary neurotrophic factor receptor subunit alpha,CYTOKINE/Immune System,03/29/23,Cryo-EM structure of human CNTFR alpha in complex with the Fab fragments of two antibodies,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Zhou, Y., Franklin, M.C.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8d7e_D_E_C,False
8dzi,G,F,0,E,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,08/31/22,Structure of SARS-CoV-2 Omicron BA.1.1.529 Spike trimer with one RBD down in complex with the Fab fragment of human neutralizing antibody MB.02,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Hu, Y., Xiong, Y.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGKV3,Kappa,,,,,,8dzi_G_F_E,False
7sjn,F,G,0,C,protein,,serine protease htra1,HYDROLASE/Immune System,09/07/22,HtrA1:Fab15H6.v4 complex,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Gerhardy, S., Green, E., Estevez, A., Arthur, C.P., Ultsch, M., Rohou, A., Kirchhofer, D.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,7sjn_F_G_C,False
8eka,H,L,0,P,peptide,,circumsporozoite protein,IMMUNE SYSTEM,03/15/23,Cryo-EM structure of a potent anti-malarial antibody L9 in complex with Plasmodium falciparum circumsporozoite protein (PfCSP)(class 2),Homo sapiens; Plasmodium falciparum 3D7,homo sapiens,homo sapiens,plasmodium falciparum 3d7,"Tripathi, P., Kwong, P.D.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8eka_H_L_P,False
7xxl,A,C,0,B,protein,,spike protein s1,IMMUNE SYSTEM/VIRAL PROTEIN,09/14/22,RBD in complex with Fab14,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Lin, J.Q., Tan, Y.J.E., Wu, B., Lescar, J.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV6,IGLV2,Lambda,,,,,,7xxl_A_C_B,False
8eka,A,B,0,P,peptide,,circumsporozoite protein,IMMUNE SYSTEM,03/15/23,Cryo-EM structure of a potent anti-malarial antibody L9 in complex with Plasmodium falciparum circumsporozoite protein (PfCSP)(class 2),Homo sapiens; Plasmodium falciparum 3D7,homo sapiens,homo sapiens,plasmodium falciparum 3d7,"Tripathi, P., Kwong, P.D.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8eka_A_B_P,False
7tl0,H,I,0,C,protein,,fusion glycoprotein f0,VIRAL PROTEIN/IMMUNE SYSTEM,09/14/22,Cryo-EM structure of hMPV preF bound by Fabs MPE8 and SAN32-2,Homo sapiens; Human metapneumovirus,homo sapiens,homo sapiens,human metapneumovirus,"Rush, S.A., Hsieh, C.-L., McLellan, J.S.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGKV1,Kappa,,,,,,7tl0_H_I_C,False
7tjq,H,L,0,F,protein,,fusion glycoprotein f0,VIRAL PROTEIN/IMMUNE SYSTEM,09/14/22,SAN27-14 bound to a antigenic site V on prefusion-stabilized hMPV F,Homo sapiens; Human metapneumovirus,homo sapiens,homo sapiens,human metapneumovirus,"Hsieh, C.-L., McLellan, J.S., Rush, S.A.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,7tjq_H_L_F,False
8dkx,A,B,0,P,protein,,isoform 2 of cystinosin,MEMBRANE PROTEIN/Transport protein,09/21/22,Cryo-EM structure of cystinosin N288K mutant in a cytosol-open state at pH7.5,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Schmiege, P., Li, X.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGKV15,Kappa,,,,,,8dkx_A_B_P,False
7xco,O,P,0,C,protein,,spike glycoprotein,VIRAL PROTEIN,09/21/22,Cryo-EM structure of SARS-CoV-2 Omicron spike protein (S-6P-RRAR) in complex with S309 fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Gao, G.F., Qi, J.X., Zhao, Z.N., Liu, S., Xie, Y.F.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,7xco_O_P_C,False
7sjo,H,L,0,A,protein,,serine protease htra1,HYDROLASE/Immune System,09/07/22,HtrA1S328A:Fab15H6.v4 complex,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Gerhardy, S., Green, E., Estevez, A., Arthur, C.P., Ultsch, M., Rohou, A., Kirchhofer, D.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,7sjo_H_L_A,False
8dlw,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN,08/31/22,Cryo-EM structure of SARS-CoV-2 Epsilon (B.1.429) spike protein in complex with Fab S2M11,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhu, X., Mannar, D., Saville, J.W., Srivastava, S.S., Berezuk, A.M., Zhou, S., Tuttle, K.S., Subramaniam, S.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,8dlw_H_L_A,False
8dls,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN,08/31/22,Cryo-EM structure of SARS-CoV-2 Gamma (P.1) spike protein in complex with Fab 4A8 (focused refinement of NTD and 4A8),Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhu, X., Mannar, D., Saville, J.W., Srivastava, S.S., Berezuk, A.M., Zhou, S., Tuttle, K.S., Subramaniam, S.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV2,Kappa,,,,,,8dls_H_L_A,False
8dlr,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN,08/31/22,Cryo-EM structure of SARS-CoV-2 Gamma (P.1) spike protein in complex with Fab 4-8 (focused refinement of NTD and 4-8),Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhu, X., Mannar, D., Saville, J.W., Srivastava, S.S., Berezuk, A.M., Zhou, S., Tuttle, K.S., Subramaniam, S.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV3,Lambda,,,,,,8dlr_H_L_A,False
8dad,H,L,0,B,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,08/24/22,SARS-CoV-2 receptor binding domain in complex with AZ090 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zong, S., Wang, Z., Gaebler, C., Nussenzweig, M.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,8dad_H_L_B,False
7xcp,H,L,0,B,protein,,spike protein s1,VIRAL PROTEIN,08/31/22,Cryo-EM structure of Omicron RBD complexed with ACE2 and 304 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhao, Z., Qi, J., Gao, F.G.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7xcp_H_L_B,False
8il3,B,A,0,C,protein,,adp-ribosyl cyclase/cyclic adp-ribose hydrolase 1,HYDROLASE,03/29/23,Cryo-EM structure of CD38 in complex with FTL004,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Yang, J., Wang, Y., Zhang, G.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV7,IGKV3,Kappa,,,,,,8il3_B_A_C,False
7x94,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN,03/22/23,The SARS-CoV-2 receptor binding domain bound with the Fab fragment of a human neutralizing antibody Ab712,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Kamada, K., Shirouzu, M.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV7,IGLV3,Lambda,,,,,,7x94_H_L_A,False
7x95,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN,03/22/23,The SARS-CoV-2 receptor binding domain bound with the Fab fragment of a human neutralizing antibody Ab709,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Kamada, K., Shirouzu, M.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV1,Lambda,,,,,,7x95_H_L_A,False
7x96,H,L,0,G,protein,,spike glycoprotein,VIRAL PROTEIN,03/22/23,The SARS-CoV-2 receptor binding domain bound with the Fab fragment of a human neutralizing antibody Ab847,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Kamada, K., Shirouzu, M.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,7x96_H_L_G,False
8bcz,H,L,0,R,protein,,spike protein s1,VIRAL PROTEIN,03/22/23,"SARS-CoV-2 Delta-RBD complexed with Fabs BA.2-36, BA.2-23, EY6A and COVOX-45",Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Duyvesteyn, H.M.E., Ren, J., Stuart, D.I.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8bcz_H_L_R,False
8bcz,C,D,0,R,protein,,spike protein s1,VIRAL PROTEIN,03/22/23,"SARS-CoV-2 Delta-RBD complexed with Fabs BA.2-36, BA.2-23, EY6A and COVOX-45",Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Duyvesteyn, H.M.E., Ren, J., Stuart, D.I.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8bcz_C_D_R,False
8bcz,E,F,0,R,protein,,spike protein s1,VIRAL PROTEIN,03/22/23,"SARS-CoV-2 Delta-RBD complexed with Fabs BA.2-36, BA.2-23, EY6A and COVOX-45",Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Duyvesteyn, H.M.E., Ren, J., Stuart, D.I.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8bcz_E_F_R,False
8bcz,A,B,0,R,protein,,spike protein s1,VIRAL PROTEIN,03/22/23,"SARS-CoV-2 Delta-RBD complexed with Fabs BA.2-36, BA.2-23, EY6A and COVOX-45",Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Duyvesteyn, H.M.E., Ren, J., Stuart, D.I.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV1,Kappa,,,,,,8bcz_A_B_R,False
8h01,I,H,0,C,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,04/12/23,SARS-CoV-2 Omicron BA.1 Spike glycoprotein in complex with rabbit monoclonal antibody 1H1 Fab in class 2 conformation,Oryctolagus cuniculus; Severe acute respiratory syndrome coronavirus 2,oryctolagus cuniculus,oryctolagus cuniculus,severe acute respiratory syndrome coronavirus2 ,"Guo, H., Gao, Y., Lu, Y., Yang, H., Ji, X.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,8h01_I_H_C,False
8sb0,C,D,0,A,protein,,ch848.10.17.sosip gp120,VIRAL PROTEIN/IMMUNE SYSTEM,04/19/23,CryoEM structure of DH270.I4.6-CH848.10.17,HIV-1 06TG.HT008; Homo sapiens,homo sapiens,homo sapiens,hiv-1 06tg.ht008,"Henderson, R., Zhou, Y., Stalls, V., Bartesaghi, B., Acharya, P.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV2,Lambda,,,,,,8sb0_C_D_A,False
8sb1,C,D,0,A,protein,,ch848.10.17 gp120,VIRAL PROTEIN/IMMUNE SYSTEM,04/19/23,CryoEM structure of DH270.I3-CH848.10.17,HIV-1 06TG.HT008; Homo sapiens,homo sapiens,homo sapiens,hiv-1 06tg.ht008,"Henderson, R., Zhou, Y., Stalls, V., Bartesaghi, B., Acharya, P.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV2,Lambda,,,,,,8sb1_C_D_A,False
7x1m,C,D,0,M,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,07/06/22,"The complex structure of Omicron BA.1 RBD with BD604, S309,and S304",Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Huang, M., Xie, Y.F., Qi, J.X.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7x1m_C_D_M,False
7zyi,H,L,0,A,protein,,sodium/bile acid cotransporter,TRANSPORT PROTEIN,07/13/22,Structure of the human sodium/bile acid cotransporter (NTCP) in complex with Fab and nanobody,Homo sapiens; Lama glama; Mus musculus,mus musculus,mus musculus,homo sapiens,"Liu, H., Irobalieva, R.N., Nosol, K., Locher, K.P.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7zyi_H_L_A,False
7x6a,I,K,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,07/13/22,SARS-CoV-2 BA.2 variant spike protein in complex with Fab BD55-5840,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Wang, X., Wang, L.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV7,IGKV3,Kappa,,,,,,7x6a_I_K_A,False
8sb2,C,D,0,A,protein,,ch848.10.17.sosip gp120,VIRAL PROTEIN/IMMUNE SYSTEM,04/19/23,CryoEM structure of DH270.I2-CH848.10.17,HIV-1 06TG.HT008; Homo sapiens,homo sapiens,homo sapiens,hiv-1 06tg.ht008,"Henderson, R., Zhou, Y., Stalls, V., Bartesaghi, B., Acharya, P.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV2,Lambda,,,,,,8sb2_C_D_A,False
7wk0,D,E,0,F,protein,,spike protein s1,VIRAL PROTEIN,07/13/22,Local refine of Omicron spike bitrimer with 6m6 antibody,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhan, W.Q., Zhang, X., Chen, Z.G., Sun, L.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV3,Lambda,,,,,,7wk0_D_E_F,False
8saz,M,N,0,K,protein,,envelope glycoprotein gp160,VIRAL PROTEIN/IMMUNE SYSTEM,01/08/09,CryoEM structure of DH270.I5.6-CH848.10.17,HIV-1 06TG.HT008; Homo sapiens,homo sapiens,homo sapiens,hiv-1 06tg.ht008,"Henderson, R., Zhou, Y., Stalls, V., Bartesaghi, B., Acharya, P.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV2,Lambda,,,,,,8saz_M_N_K,False
7wp0,H,L,0,F,protein,,spike protein s1,IMMUNE SYSTEM/VIRAL PROTEIN,07/20/22,Cryo-EM structure of SARS-CoV-2 Delta S6P trimer in complex with neutralizing antibody VacW-209 (local refinement),Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zheng, Q., Sun, H., Ju, B., Zhang, Z., Li, S., Xia, N.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV1,Lambda,,,,,,7wp0_H_L_F,False
8say,M,N,0,K,protein,,ch848.10.17 gp120,VIRAL PROTEIN/IMMUNE SYSTEM,04/19/23,CryoEM structure of DH270.3-CH848.10.17,HIV-1 06TG.HT008; Homo sapiens,homo sapiens,homo sapiens,hiv-1 06tg.ht008,"Henderson, R., Zhou, Y., Stalls, V., Bartesaghi, B., Acharya, P.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV2,Lambda,,,,,,8say_M_N_K,False
8saq,C,D,0,A,protein,,ch848.0526.25 gp120,VIRAL PROTEIN/IMMUNE SYSTEM,04/19/23,CryoEM structure of DH270.6-CH848.0526.25,HIV-1 06TG.HT008; Homo sapiens,homo sapiens,homo sapiens,hiv-1 06tg.ht008,"Henderson, R., Zhou, Y., Stalls, V., Bartesaghi, B., Acharya, P.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV2,Lambda,,,,,,8saq_C_D_A,False
8sas,C,D,0,A,protein,,ch848.10.17 gp120,VIRAL PROTEIN/IMMUNE SYSTEM,04/19/23,CryoEM structure of DH270.5-CH848.10.17,HIV-1 06TG.HT008; Homo sapiens,homo sapiens,homo sapiens,hiv-1 06tg.ht008,"Henderson, R., Zhou, Y., Stalls, V., Bartesaghi, B., Acharya, P.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV2,Lambda,,,,,,8sas_C_D_A,False
8sau,C,D,0,A,protein,,ch848.10.17 gp120,VIRAL PROTEIN/IMMUNE SYSTEM,01/08/09,CryoEM structure of DH270.4-CH848.10.17,HIV-1 06TG.HT008; Homo sapiens,homo sapiens,homo sapiens,hiv-1 06tg.ht008,"Henderson, R., Zhou, Y., Stalls, V., Bartesaghi, B., Acharya, P.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV2,Lambda,,,,,,8sau_C_D_A,False
8sav,C,D,0,A,protein,,ch848.0526.25 gp120,VIRAL PROTEIN/IMMUNE SYSTEM,04/19/23,CryoEM structure of VRC01-CH848.0526.25,HIV-1 06TG.HT008; Homo sapiens,homo sapiens,homo sapiens,hiv-1 06tg.ht008,"Henderson, R., Zhou, Y., Stalls, V., Bartesaghi, B., Acharya, P.",0.0,ELECTRON MICROSCOPY,,,False,True,unknown,unknown,unknown,,,,,,8sav_C_D_A,False
7wog,A,B,0,C,protein,,spike protein s1,VIRAL PROTEIN,07/20/22,SARS-CoV-2 Omicron S monomer complexed with 553-49,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhan, W.Q., Zhang, X., Chen, Z.G., Sun, L.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV6,Lambda,,,,,,7wog_A_B_C,False
7wob,H,I,0,E,protein,,spike glycoprotein,VIRAL PROTEIN,07/20/22,SARS-CoV-2 Spike in complex with IgG 553-60 (2-up trimer),Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhan, W.Q., Zhang, X., Chen, Z.G., Sun, L.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,7wob_H_I_E,False
7sk9,F,E,0,A,protein,,atypical chemokine receptor 3,SIGNALING PROTEIN/IMMUNE SYSTEM,07/27/22,"Cryo-EM structure of human ACKR3 in complex with a small molecule partial agonist CCX662, and an intracellular Fab",Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Yen, Y.C., Schafer, C.T., Gustavsson, M., Handel, T.M., Tesmer, J.J.G.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7sk9_F_E_A,False
7sk8,F,E,0,A,protein,,atypical chemokine receptor 3,SIGNALING PROTEIN/IMMUNE SYSTEM,07/27/22,"Cryo-EM structure of human ACKR3 in complex with CXCL12, a small molecule partial agonist CCX662, an extracellular Fab, and an intracellular Fab",Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Yen, Y.C., Schafer, C.T., Gustavsson, M., Handel, T.M., Tesmer, J.J.G.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7sk8_F_E_A,False
7sk8,D,C,0,B,protein,,stromal cell-derived factor 1,SIGNALING PROTEIN/IMMUNE SYSTEM,07/27/22,"Cryo-EM structure of human ACKR3 in complex with CXCL12, a small molecule partial agonist CCX662, an extracellular Fab, and an intracellular Fab",Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Yen, Y.C., Schafer, C.T., Gustavsson, M., Handel, T.M., Tesmer, J.J.G.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7sk8_D_C_B,False
8dt3,H,L,0,C,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,08/03/22,Cryo-EM structure of spike binding to Fab of neutralizing antibody (locally refined),Mus musculus; Severe acute respiratory syndrome coronavirus 2,mus musculus,mus musculus,severe acute respiratory syndrome coronavirus2 ,"Sun, P.C., Fang, Y., Bai, X.C., Chen, Z.J.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV10,Kappa,,,,,,8dt3_H_L_C,False
7vgs,F,E,0,B,protein,,membrane protein,VIRAL PROTEIN/IMMUNE SYSTEM,08/03/22,SARS-CoV-2 M protein dimer (short form) in complex with YN7717_9 Fab,Mus musculus; Severe acute respiratory syndrome coronavirus 2,mus musculus,mus musculus,severe acute respiratory syndrome coronavirus2 ,"Zhang, Z., Ohto, U., Shimizu, T.",0.0,ELECTRON MICROSCOPY,,,False,False,IGHV1,IGKV3,Kappa,,,,,,7vgs_F_E_B,False
7vgr,F,E,0,B,protein,,membrane protein,VIRAL PROTEIN/IMMUNE SYSTEM,08/03/22,SARS-CoV-2 M protein dimer (long form) in complex with YN7756_1 Fab,Mus musculus; Severe acute respiratory syndrome coronavirus 2,mus musculus,mus musculus,severe acute respiratory syndrome coronavirus2 ,"Zhang, Z., Ohto, U., Shimizu, T.",0.0,ELECTRON MICROSCOPY,,,False,False,IGHV1,IGKV3,Kappa,,,,,,7vgr_F_E_B,False
7ura,H,L,0,A,protein,,isoform 2 of protein-serine o-palmitoleoyltransferaseporcupine ,TRANSFERASE/TRANSFERASE INHIBITOR,07/20/22,Human PORCN in complex with Palmitoleoyl-CoA,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Liu, Y., Qi, X., Li, X.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV12,Kappa,,,,,,7ura_H_L_A,False
8hhx,F,G,0,B,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,02/01/23,SARS-CoV-2 Delta Spike in complex with FP-12A,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Chen, X., Wu, Y.-M.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV6,Lambda,,,,,,8hhx_F_G_B,False
7wo5,H,I,0,C,protein,,spike glycoprotein,VIRAL PROTEIN,07/20/22,SARS-CoV-2 Spike in complex with IgG 553-15 (S-553-15 trimer),Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhan, W.Q., Zhang, X., Chen, Z.G., Sun, L.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV6,Lambda,,,,,,7wo5_H_I_C,False
8sb3,C,D,0,A,protein,,ch848.10.17 gp120,VIRAL PROTEIN/IMMUNE SYSTEM,04/19/23,CryoEM structure of DH270.2-CH848.10.17,HIV-1 06TG.HT008; Homo sapiens,homo sapiens,homo sapiens,hiv-1 06tg.ht008,"Henderson, R., Zhou, Y., Stalls, V., Bartesaghi, B., Acharya, P.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV2,Lambda,,,,,,8sb3_C_D_A,False
8sb4,C,D,0,A,protein,,ch848.10.17 gp120,VIRAL PROTEIN/IMMUNE SYSTEM,01/08/09,CryoEM structure of DH270.1-CH848.10.17,HIV-1 06TG.HT008; Homo sapiens,homo sapiens,homo sapiens,hiv-1 06tg.ht008,"Henderson, R., Zhou, Y., Stalls, V., Bartesaghi, B., Acharya, P.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV2,Lambda,,,,,,8sb4_C_D_A,False
7urf,O,P,0,A,protein,,protein-cysteine n-palmitoyltransferase hhat,TRANSFERASE/TRANSFERASE INHIBITOR,07/20/22,Human HHAT H379C in complex with SHH N-terminal peptide,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Liu, Y., Qi, X., Li, X.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV9,IGKV1,Kappa,,,,,,7urf_O_P_A,False
7zlk,Q,R,0,C,protein,,amc009 sosipv5.2 envelope glycoprotein gp120,VIRAL PROTEIN,09/21/22,AMC009 SOSIPv5.2 in complex with Fabs ACS101 and ACS124,Homo sapiens; Human immunodeficiency virus 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"van Schooten, J., Ozorowski, G., Ward, A.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV2,Kappa,,,,,,7zlk_Q_R_C,False
7zlk,M,N,0,F,protein,,amc009 sosipv5.2 envelope glycoprotein gp41,VIRAL PROTEIN,09/21/22,AMC009 SOSIPv5.2 in complex with Fabs ACS101 and ACS124,Homo sapiens; Human immunodeficiency virus 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"van Schooten, J., Ozorowski, G., Ward, A.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGLV3,Lambda,,,,,,7zlk_M_N_F,False
7wck,A,B,0,R,protein,,surface glycoprotein,VIRAL PROTEIN,12/28/22,Local CryoEM structure of the SARS-CoV-2 S6P(B.1.617.2) in complex with SWA9 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Du, S., Xiao, J.Y.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,7wck_A_B_R,False
7wwi,E,D,0,A,protein,,spike glycoprotein,VIRAL PROTEIN,02/15/23,EM structure of SARS-CoV-2 Omicron variant spike glycoprotein and 55A8,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Guo, H., Gao, Y., Lu, Y., Yang, H., Ji, X.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,7wwi_E_D_A,False
7yar,K,L,0,B,protein,,e protein,VIRUS,01/04/23,ZIKV_Fab_G9E,Homo sapiens; Zika virus ZIKV/H. sapiens/FrenchPolynesia/10087PF/2013,homo sapiens,homo sapiens,zika virus zikv/h.sapiens/frenchpolynesia/10087pf/2013 ,"Shu, B., Thiam-Seng, N., Lok, S.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV2,Lambda,,,,,,7yar_K_L_B,False
7whd,J,K,0,B,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,01/18/23,SARS-CoV-2 spike in complex with the ZB8 neutralizing antibody Fab (2u1d),Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zeng, J.W., Wang, X.W., Ge, J.W., Wang, Z.Y.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,7whd_J_K_B,False
8hcb,H,L,0,C,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,01/25/23,SARS-CoV-2 Omicron BA.1 spike trimer (6P) in complex with 3 YB13-292 Fabs (2 RBD up),Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Liu, B., Gao, X., Chen, Q., Li, Z., Su, M., He, J., Xiong, X.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV2,Kappa,,,,,,8hcb_H_L_C,False
7wcp,D,E,0,B,protein,,surface glycoprotein,VIRAL PROTEIN,12/28/22,CryoEM structure of the SARS-CoV-2 S6P(B.1.617.2) in complex with SWC11 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Du, S., Xiao, J.Y.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV3,Kappa,,,,,,7wcp_D_E_B,False
8diu,H,I,0,A,protein,,hemagglutinin,VIRAL PROTEIN/IMMUNE SYSTEM,12/14/22,Cryo-EM structure of influenza A virus A/Bayern/7/1995 hemagglutinin bound to CR6261 Fab,Homo sapiens; Influenza A virus,homo sapiens,homo sapiens,influenza a virus,Seattle Structural Genomics Center for Infectious Disease (SSGCID),0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV1,Lambda,,,,,,8diu_H_I_A,False
7wtk,I,K,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,12/14/22,SARS-CoV-2 Omicron variant spike in complex with Fab XGv286,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Wang, X., Fu, W.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV1,Lambda,,,,,,7wtk_I_K_A,False
7wth,H,L,0,E,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,12/14/22,SARS-CoV-2 Omicron variant spike RBD in complex with Fab XGv264,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Wang, X., Fu, W.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV2,IGLV2,Lambda,,,,,,7wth_H_L_E,False
7wtg,H,L,0,E,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,12/14/22,SARS-CoV-2 Omicron variant spike RBD in complex with Fab XGv051,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Wang, X., Fu, W.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,7wtg_H_L_E,False
8hik,H,L,0,A,protein,,bril-slc19a1 chimera,TRANSPORT PROTEIN,12/21/22,The TPP-bound BRIL-SLC19A1/Fab/Nb ternary complex,Escherichia coli; Homo sapiens; Lama glama,homo sapiens,homo sapiens,"escherichia coli, homo sapiens","Zhang, Z., Dang, Y.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8hik_H_L_A,False
7xdk,N,O,0,C,protein,,spike glycoprotein,VIRAL PROTEIN,03/01/23,Cryo-EM structure of SARS-CoV-2 Delta Spike protein in complex with BA7054 and BA7125 fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Liu, Z., Lui, S., Gao, Y.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7xdk_N_O_C,False
7wur,G,H,0,B,protein,,core protein,VIRAL PROTEIN/IMMUNE SYSTEM,12/21/22,CryoEM structure of sNS1 complexed with Fab5E3,Dengue virus 2; Homo sapiens,homo sapiens,homo sapiens,dengue virus 2,"Shu, B., Lok, S.M.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV3,Kappa,,,,,,7wur_G_H_B,False
7ykj,A,D,0,C,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,12/28/22,Omicron RBDs bound with P3E6 Fab (one up and one down),Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Tang, B., Dang, S.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV3,Kappa,,,,,,7ykj_A_D_C,False
7urx,H,L,0,C,protein,,b-lymphocyte antigen cd19,PROTEIN BINDING,02/15/23,SJ25C1 Fab in complex with soluble CD19,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Meyerson, J., He, C.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV6,Kappa,,,,,,7urx_H_L_C,False
7uz4,H,L,0,A,protein,,spike glycoprotein,IMMUNE SYSTEM/VIRAL PROTEIN,12/07/22,"Structure of the SARS-CoV-2 S 6P trimer in complex with the mouse antibody Fab fragment, M8a-3",Mus musculus; Severe acute respiratory syndrome coronavirus 2,mus musculus,mus musculus,severe acute respiratory syndrome coronavirus2 ,"Fan, C., Bjorkman, P.J.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV6,Kappa,,,,,,7uz4_H_L_A,False
8f6i,F,E,0,B,protein,,cadmium and zinc efflux pump fief,TRANSPORT PROTEIN,02/08/23,Cryo-EM structure of a Zinc-loaded symmetrical D70A mutant of the YiiP-Fab complex,Homo sapiens; Shewanella oneidensis MR-1,homo sapiens,homo sapiens,shewanella oneidensis mr-1,"Lopez-Redondo, M.L., Hussein, A.K., Stokes, D.L.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8f6i_F_E_B,False
8dl6,D,C,0,A,protein,,solute carrier family 40 member 1,MEMBRANE PROTEIN,01/25/23,Cryo-EM structure of human ferroportin/slc40 bound to Ca2+ in nanodisc,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Shen, J., Wilbon, A.S., Pan, Y., Zhou, M.",0.0,ELECTRON MICROSCOPY,,,False,False,IGHV14,IGKV6,Kappa,,,,,,8dl6_D_C_A,False
8d48,H,L,0,A,protein,,spike glycoprotein,ANTIVIRAL PROTEIN,01/25/23,sd1.040 Fab in complex with SARS-CoV-2 Spike 2P glycoprotein,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Abernathy, M.E., Barnes, C.O.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV4,Kappa,,,,,,8d48_H_L_A,False
7wr9,A,B,0,F,protein,,spike protein s1,VIRAL PROTEIN,02/01/23,Local CryoEM structure of the SARS-CoV S2P in complex with BD55-3152 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus,"Du, S., Xiao, J.Y.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV3,Lambda,,,,,,7wr9_A_B_F,False
7t5o,H,L,0,C,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,01/25/23,VFLIP Spike Trimer with GAR03,Homo sapiens; Severe acute respiratory syndrome-related coronavirus,homo sapiens,homo sapiens,severe acute respiratory syndrome-relatedcoronavirus ,"Sobti, M., Stewart, A.G., Rouet, R., Langley, D.B.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV3,Lambda,,,,,,7t5o_H_L_C,False
8de6,B,I,0,G,protein,,complement component c9,IMMUNE SYSTEM,01/08/09,Oligomeric C9 in complex with aE11 Fab,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Bayly-Jones, C.",0.0,ELECTRON MICROSCOPY,,,False,False,IGHV2,IGKV10,Kappa,,,,,,8de6_B_I_G,False
7tn9,C,D,0,T,protein,,envelope glycoprotein,IMMUNE SYSTEM/VIRAL PROTEIN,01/25/23,Structure of the Inmazeb cocktail and resistance to escape against Ebola virus,"Ebola virus - Mayinga, Zaire, 1976; Mus musculus",mus musculus,mus musculus,"ebola virus - mayinga, zaire, 1976","Rayaprolu, V., Fulton, B., Rafique, A., Arturo, E., Williams, D., Hariharan, C., Callaway, H., Parvate, A., Schendel, S.L., Parekh, D., Hui, S., Shaffer, K., Pascal, K.E., Wloga, E., Giordano, S., Copin, R., Franklin, M., Boytz, R.M., Donahue, C., Davey, R., Baum, A., Kyratsous, C.A., Saphire, E.O.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV4,Kappa,,,,,,7tn9_C_D_T,False
7tn9,I,J,0,U,protein,,envelope glycoprotein,IMMUNE SYSTEM/VIRAL PROTEIN,01/25/23,Structure of the Inmazeb cocktail and resistance to escape against Ebola virus,"Ebola virus - Mayinga, Zaire, 1976; Mus musculus",mus musculus,mus musculus,"ebola virus - mayinga, zaire, 1976","Rayaprolu, V., Fulton, B., Rafique, A., Arturo, E., Williams, D., Hariharan, C., Callaway, H., Parvate, A., Schendel, S.L., Parekh, D., Hui, S., Shaffer, K., Pascal, K.E., Wloga, E., Giordano, S., Copin, R., Franklin, M., Boytz, R.M., Donahue, C., Davey, R., Baum, A., Kyratsous, C.A., Saphire, E.O.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7tn9_I_J_U,False
7tn9,O,P,0,V,protein,,gp2,IMMUNE SYSTEM/VIRAL PROTEIN,01/25/23,Structure of the Inmazeb cocktail and resistance to escape against Ebola virus,"Ebola virus - Mayinga, Zaire, 1976; Mus musculus",mus musculus,mus musculus,"ebola virus - mayinga, zaire, 1976","Rayaprolu, V., Fulton, B., Rafique, A., Arturo, E., Williams, D., Hariharan, C., Callaway, H., Parvate, A., Schendel, S.L., Parekh, D., Hui, S., Shaffer, K., Pascal, K.E., Wloga, E., Giordano, S., Copin, R., Franklin, M., Boytz, R.M., Donahue, C., Davey, R., Baum, A., Kyratsous, C.A., Saphire, E.O.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7tn9_O_P_V,False
7tn9,G,H,0,T,protein,,envelope glycoprotein,IMMUNE SYSTEM/VIRAL PROTEIN,01/25/23,Structure of the Inmazeb cocktail and resistance to escape against Ebola virus,"Ebola virus - Mayinga, Zaire, 1976; Mus musculus",mus musculus,mus musculus,"ebola virus - mayinga, zaire, 1976","Rayaprolu, V., Fulton, B., Rafique, A., Arturo, E., Williams, D., Hariharan, C., Callaway, H., Parvate, A., Schendel, S.L., Parekh, D., Hui, S., Shaffer, K., Pascal, K.E., Wloga, E., Giordano, S., Copin, R., Franklin, M., Boytz, R.M., Donahue, C., Davey, R., Baum, A., Kyratsous, C.A., Saphire, E.O.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7tn9_G_H_T,False
8hhz,I,J,0,C,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,02/01/23,SARS-CoV-2 Omicron BA.1 Spike in complex with IY-2A,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Chen, X., Mohapatra, A., Wu, Y.-M.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGLV6,Lambda,,,,,,8hhz_I_J_C,False
8hhy,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,02/01/23,SARS-CoV-2 Delta Spike in complex with IS-9A,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Mohapatra, A., Wu, Y.-M.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGKV1,Kappa,,,,,,8hhy_H_L_A,False
8epa,H,L,0,I,protein,,cytokine receptor common subunit gamma,IMMUNE SYSTEM,01/25/23,Structure of interleukin receptor common gamma chain (IL2Rgamma) in complex with two antibodies,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Franklin, M.C., Romero Hernandez, A.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8epa_H_L_I,False
8hc7,H,L,0,C,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,01/25/23,"SARS-CoV-2 Omicron BA.1 spike trimer (6P) complex with YB9-258 Fab, focused refinement of RBD-dimer region",Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Liu, B., Gao, X., Chen, Q., Li, Z., Su, M., He, J., Xiong, X.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8hc7_H_L_C,False
8hc6,H,L,0,C,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,01/25/23,"SARS-CoV-2 Omicron BA.1 spike trimer (6P) in complex with YB9-258 Fab, focused refinement of Fab region",Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Liu, B., Gao, X., Chen, Q., Li, Z., Su, M., He, J., Xiong, X.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8hc6_H_L_C,False
8hc5,D,E,0,C,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,01/25/23,SARS-CoV-2 wildtype S1 in complex with YB9-258 Fab and R1-32 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Liu, B., Gao, X., Chen, Q., Li, Z., Su, M., He, J., Xiong, X.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV1,Lambda,,,,,,8hc5_D_E_C,False
8epa,A,B,0,I,protein,,cytokine receptor common subunit gamma,IMMUNE SYSTEM,01/25/23,Structure of interleukin receptor common gamma chain (IL2Rgamma) in complex with two antibodies,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Franklin, M.C., Romero Hernandez, A.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8epa_A_B_I,False
8dy6,K,L,0,I,protein,,envelope glycoprotein gp160,VIRAL PROTEIN/IMMUNE SYSTEM,01/08/09,Vaccine elicited Antibody MU89+S27Y bound to CH848.D949.10.17_N133D_N138T.DS.SOSIP.664 HIV-1 Env trimer,Human immunodeficiency virus 1; Mus musculus,mus musculus,mus musculus,human immunodeficiency virus 1,"Stalls, V., Acharya, P.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV2,Lambda,,,,,,8dy6_K_L_I,False
7uz5,H,L,0,A,protein,,spike glycoprotein,IMMUNE SYSTEM/VIRAL PROTEIN,12/07/22,"Structure of the SARS-CoV-2 S 6P trimer in complex with the mouse antibody Fab fragment, M8a-6",Mus musculus; Severe acute respiratory syndrome coronavirus 2,mus musculus,mus musculus,severe acute respiratory syndrome coronavirus2 ,"Fan, C., Bjorkman, P.J.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV6,Kappa,,,,,,7uz5_H_L_A,False
7uot,O,P,0,a,protein,,unknown,VIRAL PROTEIN/IMMUNE SYSTEM,11/02/22,Native Lassa glycoprotein in complex with neutralizing antibodies 8.9F and 37.2D,Homo sapiens; Lassa virus,homo sapiens,homo sapiens,lassa virus,"Li, H., Saphire, E.O.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,7uot_O_P_a,False
7t3m,D,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,08/24/22,"SARS-CoV-2 S (Spike Glycoprotein) D614G with Three (3) RBDs Up, Bound to Antibody 2-7 scFv, composite map",Escherichia coli; Severe acute respiratory syndrome coronavirus 2,,,severe acute respiratory syndrome coronavirus2 ,"Byrne, P.O., McLellan, J.S.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV2,IGLV6,Lambda,,,,,,7t3m_D_L_A,False
7ru3,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/Immune System,08/24/22,CC6.33 IgG in complex with SARS-CoV-2-6P-Mut7 S protein (non-uniform refinement),Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Ozorowski, G., Turner, H.L., Ward, A.B.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,7ru3_H_L_A,False
8hsc,F,E,0,R,protein,,"soluble cytochrome b562,g-protein coupled receptor 20",MEMBRANE PROTEIN,03/08/23,Gi bound Orphan GPR20 complex with Fab046 in ligand-free state,Escherichia coli; Homo sapiens; Rattus; Vicugna pacos,rattus,rattus,"escherichia coli, homo sapiens","Lin, X., Jiang, S., Xu, F.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,8hsc_F_E_R,False
7sj0,B,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,11/16/22,Antibody A7V3 bound to N-terminal domain of the spike,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Hsieh, C.-L., McLellan, J.S.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV1,Lambda,,,,,,7sj0_B_L_A,False
8hs2,B,C,0,R,protein,,"soluble cytochrome b562,g-protein coupled receptor 20",MEMBRANE PROTEIN,03/08/23,Orphan GPR20 in complex with Fab046,Escherichia coli; Homo sapiens; Rattus,rattus,rattus,"escherichia coli, homo sapiens","Lin, X., Jiang, S., Xu, F.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,8hs2_B_C_R,False
7u0q,G,F,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,01/08/09,SARS-Cov2 S protein structure in complex with neutralizing monoclonal antibody 002-02,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Patel, A., Ortlund, E.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV3,Kappa,,,,,,7u0q_G_F_A,False
7u0x,F,G,0,C,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,03/01/23,SARS-Cov2 S protein structure in complex with neutralizing monoclonal antibody 002-13,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Patel, A., Ortlund, E.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV6,Lambda,,,,,,7u0x_F_G_C,False
7wsc,H,L,0,R,protein,,spike protein s1,VIRAL PROTEIN,03/01/23,Local structure of BD55-3500 and omicron RBD complex,Homo sapiens; Severe acute respiratory syndrome coronavirus,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus,"Liu, P.L.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV2,Kappa,,,,,,7wsc_H_L_R,False
7xcz,D,E,0,A,protein,,spike glycoprotein,VIRAL PROTEIN,03/01/23,Cryo-EM structure of SARS-CoV-2 Delta RBD in complex with BA7054 and BA7125 fab (local refinement),Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Liu, Z., Liu, S.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7xcz_D_E_A,False
7uov,H,L,0,A,protein,,glycoprotein g2,VIRAL PROTEIN/IMMUNE SYSTEM,11/02/22,Native Lassa glycoprotein in complex with neutralizing antibodies 12.1F and 37.2D,Homo sapiens; Lassa virus,homo sapiens,homo sapiens,lassa virus,"Li, H., Saphire, E.O.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV3,Kappa,,,,,,7uov_H_L_A,False
8e7m,H,L,0,A,protein,,angiotensin-converting enzyme 2,ANTIVIRAL PROTEIN,09/28/22,"Structure of the human ACE2 receptor in complex with antibody Fab fragment, 05B04",Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Barnes, C.O.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8e7m_H_L_A,False
7wry,H,L,0,R,protein,,spike protein s1,VIRAL PROTEIN,09/28/22,Local structure of BD55-3546 Fab and SARS-COV2 Delta RBD complex,SARS coronavirus B012,sars coronavirus b012,sars coronavirus b012,sars coronavirus b012,"Zhang, Z.Z., Xiao, J.J.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV7,IGKV3,Kappa,,,,,,7wry_H_L_R,False
7wrj,A,B,0,R,protein,,spike protein s1,VIRAL PROTEIN,09/28/22,Local CryoEM structure of the SARS-CoV-2 S6P(B.1.1.529) in complex with BD55-4637 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Du, S., Xiao, J.Y.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV2,IGLV1,Lambda,,,,,,7wrj_A_B_R,False
7ru8,H,L,0,C,protein,,spike glycoprotein,VIRAL PROTEIN/Immune System,08/24/22,CC6.30 fragment antigen binding in complex with SARS-CoV-2-6P-Mut7 S protein (RBD/Fv local refinement),Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Ozorowski, G., Turner, H.L., Ward, A.B.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,7ru8_H_L_C,False
7yr0,C,B,0,A,protein,,spike protein s1,VIRAL PROTEIN,10/19/22,SARS-CoV-2 BA.2.75 S Trimer in complex with S309 (interface),Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Wang, L.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,7yr0_C_B_A,False
7yr1,E,G,0,C,protein,,spike glycoprotein,VIRAL PROTEIN,10/19/22,SARS-CoV-2 BA.2.75 S Trimer in complex with XG2v024,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Wang, L.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7yr1_E_G_C,False
7e9o,H,L,0,A,protein,,spike glycoprotein,"VIRAL PROTEIN,IMMUNE SYSTEM",03/09/22,"Cryo-EM structure of the SARS-CoV-2 S-6P in complex with 35B5 Fab(3 up RBDs, state2)",Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Wang, X.F., Zhu, Y.Q.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV2,Kappa,,,,,,7e9o_H_L_A,False
7wbh,P,S,0,C,protein,,spike glycoprotein,VIRAL PROTEIN,10/26/22,overall structure of hu33 and spike,Homo sapiens; Severe acute respiratory syndrome-related coronavirus,homo sapiens,homo sapiens,severe acute respiratory syndrome-relatedcoronavirus ,"Pulan, L.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV7,IGKV1,Kappa,,,,,,7wbh_P_S_C,False
7u8g,D,E,0,A,protein,,"egfp, cytochrome b-245 heavy chain chimera",OXIDOREDUCTASE,10/26/22,Cryo-EM structure of the core human NADPH oxidase NOX2,Homo sapiens; Oryctolagus cuniculus,oryctolagus cuniculus,oryctolagus cuniculus,homo sapiens,"Noreng, S., Ota, N., Sun, Y., Masureel, M., Payandeh, J., Yi, T., Koerber, J.T.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,7u8g_D_E_A,False
7z12,B,C,0,A,protein,,var2csa,CELL ADHESION,11/02/22,VAR2 complex with PAM1.4,Homo sapiens; Plasmodium falciparum,homo sapiens,homo sapiens,plasmodium falciparum,"Raghavan, S.S.R., Wang, K.T.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7z12_B_C_A,False
7x92,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN,12/07/22,The SARS-CoV-2 receptor binding domain bound with the Fab fragment of a human neutralizing antibody Ab445,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Kamada, K., Shirouzu, M.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7x92_H_L_A,False
7x91,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN,12/07/22,The SARS-CoV-2 receptor binding domain bound with an Fv-clasp form of a human neutralizing antibody Ab496,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Kamada, K., Shirouzu, M.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,7x91_H_L_A,False
7xdk,L,M,0,C,protein,,spike glycoprotein,VIRAL PROTEIN,03/01/23,Cryo-EM structure of SARS-CoV-2 Delta Spike protein in complex with BA7054 and BA7125 fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Liu, Z., Lui, S., Gao, Y.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV3,Kappa,,,,,,7xdk_L_M_C,False
7x90,E,F,0,G,protein,,spike glycoprotein,VIRAL PROTEIN,12/07/22,The SARS-CoV-2 receptor binding domain bound with the Fab fragment of a human neutralizing antibody Ab326,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Kamada, K., Shirouzu, M.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7x90_E_F_G,False
7x8z,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN,12/07/22,The SARS-CoV-2 receptor binding domain bound with the Fab fragment of a human neutralizing antibody Ab188,Severe acute respiratory syndrome coronavirus 2,severe acute respiratory syndrome coronavirus2 ,severe acute respiratory syndrome coronavirus2 ,severe acute respiratory syndrome coronavirus2 ,"Kamada, K., Shirouzu, M.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV4,Kappa,,,,,,7x8z_H_L_A,False
7x8y,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN,12/07/22,The SARS-CoV-2 receptor binding domain bound with the Fab fragment of a human neutralizing antibody Ab159,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Kamada, K., Shirouzu, M.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7x8y_H_L_A,False
7x8w,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN,12/07/22,The SARS-CoV-2 receptor binding domain bound with the Fab fragment of a human neutralizing antibody Ab354,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Kamada, K., Shirouzu, M.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV2,Lambda,,,,,,7x8w_H_L_A,False
7uzb,H,L,0,A,protein,,spike glycoprotein,IMMUNE SYSTEM/VIRAL PROTEIN,12/07/22,"Structure of the SARS-CoV-2 S S1 doamin in complex with the mouse antibody Fab fragment, HSW-2",Mus musculus; Severe acute respiratory syndrome coronavirus 2,mus musculus,mus musculus,severe acute respiratory syndrome coronavirus2 ,"Fan, C., Bjorkman, P.J.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV12,Kappa,,,,,,7uzb_H_L_A,False
7uz9,P,Q,0,C,protein,,spike glycoprotein,IMMUNE SYSTEM/VIRAL PROTEIN,12/07/22,"Structure of the SARS-CoV-2 S 6P trimer in complex with the mouse antibody Fab fragment, M8a-34",Mus musculus; Severe acute respiratory syndrome coronavirus 2,mus musculus,mus musculus,severe acute respiratory syndrome coronavirus2 ,"Fan, C., Bjorkman, P.J.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,7uz9_P_Q_C,False
7uz8,P,Q,0,C,protein,,spike glycoprotein,IMMUNE SYSTEM/VIRAL PROTEIN,12/07/22,"Structure of the SARS-CoV-2 Omicron BA.1 S 6P trimer in complex with the mouse antibody Fab fragment, M8a-31",Mus musculus; Severe acute respiratory syndrome coronavirus 2,mus musculus,mus musculus,severe acute respiratory syndrome coronavirus2 ,"Fan, C., Bjorkman, P.J.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV14,IGKV8,Kappa,,,,,,7uz8_P_Q_C,False
7uz6,P,Q,0,C,protein,,spike glycoprotein,IMMUNE SYSTEM/VIRAL PROTEIN,12/07/22,"Structure of the SARS-CoV-2 S 6P trimer in complex with the mouse antibody Fab fragment, M8a-28",Mus musculus; Severe acute respiratory syndrome coronavirus 2,mus musculus,mus musculus,severe acute respiratory syndrome coronavirus2 ,"Fan, C., Bjorkman, P.J.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV5,Kappa,,,,,,7uz6_P_Q_C,False
8dw2,H,L,0,B,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,12/07/22,"Cryo-EM structure of SARS-CoV-2 RBD in complex with anti-SARS-CoV-2 DARPin,SR22, and two antibody Fabs, S309 and CR3022",Homo sapiens; Severe acute respiratory syndrome coronavirus 2; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Kwon, Y.D., Gorman, J., Kwong, P.D.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGKV4,Kappa,,,,,,8dw2_H_L_B,False
7xda,D,E,0,A,protein,,spike glycoprotein,VIRAL PROTEIN,03/01/23,Cryo-EM structure of SARS-CoV-2 Delta RBD in complex with BA7208 and BA7125 fab (local refinement),Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Liu, Z., Liu, S., Liu, S.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGKV1,Kappa,,,,,,7xda_D_E_A,False
7xdb,D,E,0,A,protein,,spike glycoprotein,VIRAL PROTEIN,03/01/23,Cryo-EM structure of SARS-CoV-2 Omicron Spike protein in complex with BA7208 fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Liu, Z., Liu, S., Gao, Y.Z.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGKV1,Kappa,,,,,,7xdb_D_E_A,False
7umm,J,N,0,C,protein,,hemagglutinin,VIRAL PROTEIN,11/23/22,H1 Solomon Islands 2006 hemagglutinin in complex with Ab109,Influenza A virus (A/Solomon Islands/3/2006(H1N1)); Mus musculus,mus musculus,mus musculus,influenza a virus (a/solomonislands/3/2006(h1n1)) ,"Windsor, I.W., Caradonna, T.M., Schmidt, A.G.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,7umm_J_N_C,False
7u9p,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,11/23/22,SARS-CoV-2 spike trimer RBD in complex with Fab NA8,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Tsybovsky, Y., Kwong, P.D., Farci, P.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7u9p_H_L_A,False
7u9o,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,11/23/22,SARS-CoV-2 spike trimer RBD in complex with Fab NE12,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Tsybovsky, Y., Kwong, P.D., Farci, P.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,7u9o_H_L_A,False
7swx,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,11/23/22,SARS-CoV-2 Spike in complex with neutralizing Fab SARS2-57 (three down conformation),Mus musculus; Severe acute respiratory syndrome coronavirus 2,mus musculus,mus musculus,severe acute respiratory syndrome coronavirus2 ,"Adams, L.J., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID)",0.0,ELECTRON MICROSCOPY,,,False,False,IGHV14,IGKV8,Kappa,,,,,,7swx_H_L_A,False
7t17,F,G,0,A,protein,,core protein,VIRUS,11/23/22,Zika Virus asymmetric unit bound with IgM antibody DH1017 Fab fragment,Homo sapiens; Zika virus,homo sapiens,homo sapiens,zika virus,"Miller, A.S., Kuhn, R.J.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGLV1,Lambda,,,,,,7t17_F_G_A,False
8hec,E,D,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,04/26/23,SARS-CoV-2 Spike trimer in complex with RmAb 9H1 Fab in the class 2 conformation,Oryctolagus cuniculus; Severe acute respiratory syndrome coronavirus 2,oryctolagus cuniculus,oryctolagus cuniculus,severe acute respiratory syndrome coronavirus2 ,"Guo, H., Gao, Y., Lu, Y., Yang, H., Ji, X.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,8hec_E_D_A,False
7umn,I,M,0,B,protein,,hemagglutinin,VIRAL PROTEIN,04/19/23,H1 Solomon Islands 2006 hemagglutinin in complex with Ab36,Influenza A virus (A/Solomon Islands/3/2006(H1N1)); Mus musculus,mus musculus,mus musculus,influenza a virus (a/solomonislands/3/2006(h1n1)) ,"Windsor, I.W., Caradonna, T.M., Schmidt, A.G.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV4,Kappa,,,,,,7umn_I_M_B,False
7xj6,K,J,0,B,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,04/19/23,SARS-CoV-2 BA.1 Spike trimer in complex with 55A8 Fab and 58G6 Fab in the class 1 conformation,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Guo, H., Gao, Y., Lu, Y., Yang, H., Ji, X.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,7xj6_K_J_B,False
8ct6,H,L,0,A,protein,,cobra p1 ha,Viral Protein/IMMUNE SYSTEM,04/19/23,1F8 mAb in complex with the computationally optimized broadly reactive H1 influenza hemagglutinin P1,Influenza A virus; Mus musculus,mus musculus,mus musculus,influenza a virus,"Dzimianski, J.V., DuBois, R.M.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,8ct6_H_L_A,False
7uow,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN,04/19/23,SARS-Cov2 S protein structure in complex with neutralizing monoclonal antibody 034_32,Homo sapiens; Severe acute respiratory syndrome coronavirus,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus,"Patel, A., Ortlund, E.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7uow_H_L_A,False
7uja,B,D,0,A,protein,,rsv variant (construct pxcs847a) f1,VIRAL PROTEIN,04/19/23,Cryo-EM structure of Human respiratory syncytial virus F variant (construct pXCS847A),Mus musculus; Respiratory syncytial virus,mus musculus,mus musculus,respiratory syncytial virus,"Lees, J.A., Ammirati, M., Han, S.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7uja_B_D_A,False
7wro,H,L,0,R,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,01/27/22,Local structure of BD55-3372 and delta spike,Homo sapiens; Severe acute respiratory syndrome coronavirus,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus,"Liu, P.L.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV1,Lambda,,,,,,7wro_H_L_R,False
7wrl,A,B,0,R,protein,,spike protein s1,VIRAL PROTEIN,01/27/22,Local structure of BD55-1239 Fab and SARS-COV2 Omicron RBD complex,SARS coronavirus B012,sars coronavirus b012,sars coronavirus b012,sars coronavirus b012,"Zhang, Z.Z., Xiao, J.J.",0.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV2,Lambda,,,,,,7wrl_A_B_R,False
9ia3,B,A,0,E,peptide,,large s protein,IMMUNE SYSTEM,11/26/25,Bc8.108 Fab bound to preS2 peptide,Homo sapiens; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,hepatitis b virus,"Mechaly, A.E., Haouz, A., Beretta, M., Caillet-Saguy, C., Mouquet, H.",1.11,X-RAY DIFFRACTION,0.187,0.173,False,True,IGHV1,IGKV3,Kappa,,,,,,9ia3_B_A_E,False
6osh,H,L,0,K,protein,,tyrosine-protein kinase transmembrane receptor ror2,IMMUNE SYSTEM,04/01/20,Potent and Selective Antitumor Antibody Targeting a Membrane-Proximal Epitope of ROR2,ORYCTOLAGUS CUNICULUS; HOMO SAPIENS,oryctolagus cuniculus,oryctolagus cuniculus,homo sapiens,"Park, H., Rader, C.",1.117,X-RAY DIFFRACTION,0.169,0.162,False,True,IGHV1,IGKV1,Kappa,,,,,,6osh_H_L_K,False
8rmo,H,L,0,F,peptide,,flag-tag,IMMUNE SYSTEM,04/03/24,Crystal structure of anti-FLAG M2 Fab fragment bound to FLAG-tag peptide epitope,Mus musculus; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,synthetic construct,"Beugelink, J.W., Janssen, B.J.C., Pronker, M.F.",1.163,X-RAY DIFFRACTION,0.186,0.158,False,True,IGHV1,IGKV1,Kappa,,,,,,8rmo_H_L_F,False
5xct,A,B,0,C,peptide,,c8 peptide,IMMUNE SYSTEM,03/23/17,Crystal structure of P20.1 Fv-clasp fragment with its antigen peptide,MUS MUSCULUS; HOMO SAPIENS; SYNTHETIC CONSTRUCT,"mus musculus, homo sapiens","mus musculus, homo sapiens",homo sapiens,"Arimori, T., Takagi, J.",1.17,X-RAY DIFFRACTION,0.185,0.152,False,True,IGHV9,IGLV1,Lambda,,,,,,5xct_A_B_C,False
3d9a,H,L,0,C,protein,,lysozyme c,HYDROLASE/IMMUNE SYSTEM,05/27/08,High Resolution Crystal Structure Structure of HyHel10 Fab Complexed to Hen Egg Lysozyme,MUS MUSCULUS; GALLUS GALLUS,mus musculus,mus musculus,gallus gallus,"DeSantis, M.E., Li, M., Shanmuganathan, A., Acchione, M., Walter, R., Wlodawer, A., Smith-Gill, S.",1.2,X-RAY DIFFRACTION,0.205,0.190,False,True,IGHV3,IGKV5,Kappa,,,,,,3d9a_H_L_C,False
4qyo,A,B,0,Q,peptide,,merozoite surface antigen 2,IMMUNE SYSTEM,07/24/14,Crystal Structure of anti-MSP2 Fv fragment (mAb6D8)in complex with MSP2 14-22,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,plasmodium falciparum k1,"Morales, R.A.V., MacRaild, C.A., Seow, J., Bankala, K., Drinkwater, N., McGowan, S., Rouet, R., Christ, D., Anders, R.F., Norton, R.S.",1.208,X-RAY DIFFRACTION,0.170,0.151,False,True,IGHV14,IGKV3,Kappa,6.000000000000001e-09,-11.216608560689204,Unknown,,TBD,4qyo_A_B_Q,False
6wfy,H,L,0,P,peptide,,npna4 peptide,IMMUNE SYSTEM,04/04/20,Crystal structure of Fab224 in complex with NPNA4 peptide from circumsporozoite protein,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,plasmodium falciparum,"Pholcharee, T., Oyen, D., Wilson, I.A.",1.226,X-RAY DIFFRACTION,0.183,0.169,False,True,IGHV3,IGLV1,Lambda,,,,,,6wfy_H_L_P,False
8vtd,B,A,0,C,protein,,t-cell immunoreceptor with ig and itim domains,IMMUNE SYSTEM,07/02/25,Co-structure of the Fab of the anti-TIGIT Vibostolimab antibody with its antigen,Homo sapiens; Mus musculus,homo sapiens,mus musculus,homo sapiens,"Fischmann, T.",1.23,X-RAY DIFFRACTION,0.204,0.185,False,True,IGHV1,IGKV1,Kappa,,,,,,8vtd_B_A_C,False
7rpu,A,B,0,P,peptide,,gp2 epitope peptide,ANTIVIRAL PROTEIN,07/13/22,Crystal Structure of Protective Human Antibody 3A6 Fab Against Ebola Virus with GP Stalk/MPER Epitope Peptide,Homo sapiens; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,zaire ebolavirus (strain eckron-76),"Salie, Z.L., Saphire, E.O., Davis, C.W., Ahmed, R.",1.27,X-RAY DIFFRACTION,0.160,0.141,False,True,IGHV3,IGKV2,Kappa,,,,,,7rpu_A_B_P,False
6ucf,H,L,0,A,peptide,,hiv fusion peptide,IMMUNE SYSTEM/VIRAL PROTEIN,09/16/19,N123-VRC34_pI4 HIV neutralizing antibody in complex with HIV fusion peptide residue 512-519,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Xu, K., Kwong, P.D.",1.29,X-RAY DIFFRACTION,0.182,0.167,False,True,IGHV1,IGKV1,Kappa,,,,,,6ucf_H_L_A,False
6ddm,B,A,0,C,protein,,mhc class i polypeptide-related sequence a,IMMUNE SYSTEM,05/10/18,Crystal Structure Analysis of the Epitope of an Anti-MICA Antibody,MUS MUSCULUS; HOMO SAPIENS,mus musculus,mus musculus,homo sapiens,"Matsumoto, M.L.",1.3,X-RAY DIFFRACTION,0.205,0.188,False,True,IGHV1,IGKV4,Kappa,4.2e-10,-12.792176733448072,ITC,,TBD,6ddm_B_A_C,False
9fys,I,M,0,Z,protein,,alpha-bungarotoxin,TOXIN,07/16/25,D11 mAbs bound to alpha-Bungarotoxin,Bungarus multicinctus; Homo sapiens,homo sapiens,homo sapiens,bungarus multicinctus,"Wade, J., Bohn, M.F., Laustsen, A.H., Morth, J.P.",1.32,X-RAY DIFFRACTION,0.192,0.167,False,True,IGHV1,IGLV6,Lambda,,,,,,9fys_I_M_Z,False
8zxw,A,B,0,D,peptide,,rac-gamma serine/threonine-protein kinase,IMMUNE SYSTEM,12/11/24,Crystal structure of the anti-phosphorylated peptide C7 Fab antibody with peptide bound,Oryctolagus cuniculus; SYNTHETIC CONSTRUCT,oryctolagus cuniculus,oryctolagus cuniculus,homo sapiens,"Caaveiro, J.M.M., Kasahara, K., Tsumoto, K.",1.33,X-RAY DIFFRACTION,0.165,0.137,False,True,IGHV1,IGKV1,Kappa,,,,,,8zxw_A_B_D,False
6osv,H,L,0,K,protein,,tyrosine-protein kinase transmembrane receptor ror2,immune sytem/transferase,04/01/20,Potent and Selective Antitumor Antibody Targeting a Membrane-Proximal Epitope of ROR2,ORYCTOLAGUS CUNICULUS; HOMO SAPIENS,oryctolagus cuniculus,oryctolagus cuniculus,homo sapiens,"Park, H., Rader, C.",1.34,X-RAY DIFFRACTION,0.189,0.162,False,True,IGHV3,IGKV1,Kappa,,,,,,6osv_H_L_K,False
9f1i,I,M,0,Q,peptide,,prostate specific antigen,IMMUNE SYSTEM,07/31/24,"Crystal structure of a first-in-class antibody for alpha-1,6-fucosylated prostate-specific antigen, target bound",Oryctolagus cuniculus; SYNTHETIC CONSTRUCT,oryctolagus cuniculus,oryctolagus cuniculus,homo sapiens,"Halldorsson, S.",1.38,X-RAY DIFFRACTION,0.187,0.155,False,True,IGHV1,IGKV1,Kappa,,,,,,9f1i_I_M_Q,False
4tul,H,L,0,I,peptide,,peptide2,IMMUNE SYSTEM,06/24/14,Crystal structure of monoclonal antibody against neuroblastoma associated antigen.,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,phage #d,"Golik, P., Grudnik, P., Dubin, G., Zdzalik, M., Rokita, H., Horwacik, I.",1.4,X-RAY DIFFRACTION,0.217,0.188,False,True,IGHV1,IGKV1,Kappa,,,,,,4tul_H_L_I,False
6j14,A,B,0,G,protein,,programmed cell death protein 1,IMMUNE SYSTEM,12/27/18,Complex structure of GY-14 and PD-1,MUS MUSCULUS; HOMO SAPIENS,mus musculus,mus musculus,homo sapiens,"Chen, D., Tan, S., Whang, H., Zhang, H., Chai, Y., Qi, J., Yan, J., Gao, G.F.",1.4,X-RAY DIFFRACTION,0.215,0.188,False,True,IGHV1,IGKV1,Kappa,,,,,,6j14_A_B_G,False
5kvf,H,L,0,E,protein,,zika envelope diii,VIRAL PROTEIN/IMMUNE SYSTEM,07/14/16,"Zika specific antibody, ZV-64, bound to ZIKA envelope DIII",ZIKA VIRUS; MUS MUSCULUS,mus musculus,mus musculus,zika virus,"Zhao, H., Nelson, C.A., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID)",1.4,X-RAY DIFFRACTION,0.187,0.154,False,False,IGHV1,IGKV8,Kappa,3.2e-08,-10.224804843093384,SPR,,TBD,5kvf_H_L_E,False
7eam,H,L,0,A,protein,,spike protein s1,"VIRAL PROTEIN, IMMUNE SYSTEM",03/07/21,immune complex of SARS-CoV-2 RBD and cross-neutralizing antibody 7D6,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; MUS MUSCULUS,mus musculus,mus musculus,severe acute respiratory syndrome coronavirus2 ,"Li, T.T., Gu, Y., Li, S.W.",1.4,X-RAY DIFFRACTION,0.182,0.172,False,False,IGHV14,IGKV12,Kappa,,,,,,7eam_H_L_A,False
6o24,A,B,0,I,peptide,,circumsporozoite protein,IMMUNE SYSTEM,02/22/19,Crystal structure of 4498 Fab in complex with circumsporozoite protein NANP3 and anti-Kappa VHH domain,HOMO SAPIENS; LAMA GLAMA; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,plasmodium falciparum,"Scally, S.W., Bosch, A., Prieto, K., Murugan, R., Wardemann, H., Julien, J.P.",1.4,X-RAY DIFFRACTION,0.186,0.161,False,True,IGHV3,IGKV3,Kappa,,,,,,6o24_A_B_I,False
7ow1,H,K,0,A,peptide,,amyloid-beta precursor protein,IMMUNE SYSTEM,06/16/21,Crystal Structure of TAP01 in complex with amyloid beta peptide,Homo sapiens; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,homo sapiens,"Hall, G., Cowan, R., Carr, M.D.",1.4,X-RAY DIFFRACTION,0.200,0.152,False,True,IGHV2,IGKV10,Kappa,,,,,,7ow1_H_K_A,False
5vxr,H,L,0,P,peptide,,virus envelope protein 2,IMMUNE SYSTEM,05/24/17,The antigen-binding fragment of MAb24 in complex with a peptide from Hepatitis C Virus E2 epitope I (412-423),MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,hepatitis c virus,"Hardy, J.M., Gu, J., Boo, I., Drummer, H.E., Coulibaly, F.J.",1.4,X-RAY DIFFRACTION,0.190,0.171,False,False,IGHV3,IGKV3,Kappa,,,,,,5vxr_H_L_P,False
7m55,H,L,0,A,peptide,,spike glycoprotein stem helix peptide,"ANTIVIRAL PROTEIN, IMMUNE SYSTEM",03/22/21,B6 Fab fragment bound to the MERS-CoV spike stem helix peptide,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,middle east respiratory syndrome-relatedcoronavirus ,"Sauer, M.M., Park, Y.J., Veesler, D., Center for Structural Genomics of Infectious Diseases (CSGID), Seattle Structural Genomics Center for Infectious Disease (SSGCID)",1.4,X-RAY DIFFRACTION,0.200,0.173,False,True,IGHV1,IGKV8,Kappa,,,,,,7m55_H_L_A,False
5kvg,H,L,0,E,protein,,zika envelope diii,VIRAL PROTEIN/IMMUNE SYSTEM,07/14/16,"Zika specific antibody, ZV-67, bound to ZIKA envelope DIII",ZIKA VIRUS; MUS MUSCULUS,mus musculus,mus musculus,zika virus,"Zhao, H., Nelson, C.A., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID)",1.4,X-RAY DIFFRACTION,0.179,0.148,False,False,IGHV1,IGKV6,Kappa,8.800000000000001e-09,-10.989691901661018,SPR,,TBD,5kvg_H_L_E,False
6vry,H,L,0,G,peptide,,siv v2 peptide,IMMUNE SYSTEM,02/10/20,Structure of NCI09 fab in complex with SIV V2 peptide,MACACA MULATTA; SYNTHETIC CONSTRUCT,macaca mulatta,macaca mulatta,simian immunodeficiency virus,"Gorman, J., Ahmadi, M., Kwong, P.D.",1.4,X-RAY DIFFRACTION,0.168,0.147,False,True,IGHV4,IGKV3,Kappa,,,,,,6vry_H_L_G,False
7sg5,H,L,0,A,peptide,,pfcsp peptide 21,IMMUNE SYSTEM,10/05/21,Structure of PfCSP peptide 21 with antibody CIS43_Var2,Homo sapiens; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,synthetic construct,"Tripathi, P., Kwong, P.D.",1.4,X-RAY DIFFRACTION,0.218,0.185,False,True,IGHV1,IGKV4,Kappa,,,,,,7sg5_H_L_A,False
7doh,H,L,0,I,peptide,,gly-thr-gly-ala-thr-pro-ala-asp-asp,IMMUNE SYSTEM,12/14/20,Crystal Structure of GD-26 Fab in Complex with TD Peptide from Haloarcula Marismortui Bacteriorhodopsin I,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,haloarcula marismortui,"Lee, C.C., Pao, P.J., Wang, A.H.J.",1.45,X-RAY DIFFRACTION,0.178,0.130,False,True,IGHV1,IGKV1,Kappa,,,,,,7doh_H_L_I,False
8d36,H,L,0,F,peptide,,spike protein s2 fusion peptide,IMMUNE SYSTEM,07/27/22,Crystal structure of SARS-CoV-2 fusion peptide in complex with neutralizing antibody COV44-62,Homo sapiens; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Yuan, M., Lee, C.C.D., Wilson, I.A.",1.45,X-RAY DIFFRACTION,0.219,0.197,False,True,IGHV1,IGLV2,Lambda,,,,,,8d36_H_L_F,False
7yv1,H,L,0,A,protein,,isoform 2b of gtpase kras,SIGNALING PROTEIN,07/26/23,Human K-Ras G12D (GDP-bound) in complex with cyclic peptide inhibitor LUNA18 and KA30L Fab,Homo sapiens; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,homo sapiens,"Irie, M., Fukami, T.A., Matsuo, A., Saka, K., Nishimura, M., Saito, H., Torizawa, T., Tanada, M., Ohta, A.",1.454,X-RAY DIFFRACTION,0.277,0.238,False,True,IGHV4,IGKV1,Kappa,,,,,,7yv1_H_L_A,False
9hxo,I,M,0,B,protein,,alpha-cobratoxin,TOXIN,11/19/25,A01 mAbs bound to cobratoxin at pH 6.0,Homo sapiens; Naja kaouthia,homo sapiens,homo sapiens,naja kaouthia,"Wade, J.W., Bohn, M.F., Laustsen, A.H., Morth, J.P.",1.49,X-RAY DIFFRACTION,0.249,0.204,False,True,IGHV1,IGLV3,Lambda,,,,,,9hxo_I_M_B,False
2vxt,H,L,0,I,protein,,interleukin-18,CYTOKINE,07/10/08,Crystal structure of human IL-18 complexed to murine reference  antibody 125-2H Fab,MUS MUSCULUS; HOMO SAPIENS,mus musculus,mus musculus,homo sapiens,"Argiriadi, M.A., Xiang, T., Wu, C., Ghayur, T., Borhani, D.W.",1.49,X-RAY DIFFRACTION,0.196,0.162,False,True,IGHV1,IGKV9,Kappa,5.33e-10,-12.64,SPR,,19553661,2vxt_H_L_I,False
8che,A,B,0,D,peptide,,trem-like transcript 1 protein,BLOOD CLOTTING,12/27/23,TLT-1 binding Fab of the bispecific antibody HMB-001 in complex with the TLT-1 stalk peptide,Homo sapiens; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,homo sapiens,"Johansson, E., Schluckebier, G.",1.49,X-RAY DIFFRACTION,0.174,0.157,False,True,IGHV3,IGKV2,Kappa,,,,,,8che_A_B_D,False
7kql,H,L,0,T,protein,,hepatitis a virus cellular receptor 2,IMMUNE SYSTEM,11/16/20,Anti-Tim3 antibody Fab complex,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Deng, X.A., West, S.M., Strop, P.",1.49,X-RAY DIFFRACTION,0.200,0.177,False,True,IGHV4,IGKV3,Kappa,,,,,,7kql_H_L_T,False
5myx,B,A,0,E,peptide,,pyroglutamate-abeta pe3-18,IMMUNE SYSTEM,01/30/17,Structure of Pyroglutamate-Abeta-specific Fab c#24 in complex with human Abeta-pE3-18,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Parthier, C., Piechotta, A., Stubbs, M.T.",1.492,X-RAY DIFFRACTION,0.213,0.181,False,True,IGHV1,IGKV1,Kappa,6.85e-09,-11.13811088195787,Unknown,,TBD,5myx_B_A_E,False
1a2y,B,A,0,C,protein,,lysozyme,COMPLEX (IMMUNOGLOBULIN/HYDROLASE),01/13/98,"HEN EGG WHITE LYSOZYME, D18A MUTANT, IN COMPLEX WITH MOUSE MONOCLONAL ANTIBODY D1.3",MUS MUSCULUS; GALLUS GALLUS,mus musculus,mus musculus,gallus gallus,"Tsuchiya, D., Mariuzza, R.A.",1.5,X-RAY DIFFRACTION,0.251,0.203,False,True,IGHV2,IGKV12,Kappa,,,,,,1a2y_B_A_C,False
3ifn,H,L,0,P,peptide,,amyloid beta a4 protein,IMMUNE SYSTEM,07/24/09,X-ray structure of amyloid beta peptide:antibody (Abeta1-40:12A11) complex,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Weis, W.I., Feinberg, H., Basi, G.S., Schenk, D.",1.5,X-RAY DIFFRACTION,0.212,0.187,False,True,IGHV8,IGKV1,Kappa,,,,,,3ifn_H_L_P,False
7str,H,L,0,C,protein,,nucleoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,08/10/22,Crystal Structure of Human Fab S24-1063 in the Complex with the N-teminal Domain of Nucleocapsid Protein from SARS CoV-2,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Kim, Y., Maltseva, N., Tesar, C., Jedrzejczak, R., Dugan, H., Stamper, C., Wilson, P., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)",1.5,X-RAY DIFFRACTION,0.202,0.161,False,True,IGHV4,IGKV3,Kappa,,,,,,7str_H_L_C,False
3nps,B,C,0,A,protein,,suppressor of tumorigenicity 14 protein,HYDROLASE/IMMUNE SYSTEM,06/29/10,Crystal structure of membrane-type serine protease 1 (MT-SP1) in complex with the Fab Inhibitor S4,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Baharuddin, A.",1.5,X-RAY DIFFRACTION,0.228,0.188,False,True,IGHV1,IGLV1,Lambda,,,,,,3nps_B_C_A,True
4hpy,H,L,0,P,peptide,,envelope glycoprotein gp160,Immune System/Viral Protein,10/24/12,Crystal structure of RV144-elicited antibody CH59 in complex with V2 peptide,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,human immunodeficiency virus 1,"McLellan, J.S., Gorman, J., Haynes, B.F., Kwong, P.D.",1.5,X-RAY DIFFRACTION,0.187,0.171,False,True,IGHV3,IGLV3,Lambda,1.2e-10,-13.534418347189932,Unknown,,TBD,4hpy_H_L_P,False
5e2w,H,L,0,P,peptide,,tau-phosphopeptide,IMMUNE SYSTEM,10/01/15,Anti-TAU AT8 FAB with triply phosphorylated TAU peptide,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Malia, T., Teplyakov, A.",1.5,X-RAY DIFFRACTION,0.220,0.216,False,True,IGHV3,IGKV2,Kappa,3.1e-08,-10.243615428706017,Unknown,,TBD,5e2w_H_L_P,False
9hi6,H,L,0,A,protein,,fi6-focused design_04,BIOSYNTHETIC PROTEIN,12/03/25,Structure of scaffold FI6-focused design_04 in complex with FI6-Fab,Bacteroides uniformis ATCC 8492; Homo sapiens,homo sapiens,homo sapiens,bacteroides uniformis atcc 8492,"Cramer, J.T., Krey, T.",1.5,X-RAY DIFFRACTION,0.204,0.178,False,True,IGHV3,IGKV4,Kappa,,,,,,9hi6_H_L_A,False
8dtr,E,F,0,J,peptide,,spike protein s2' stem helix peptide,IMMUNE SYSTEM,11/23/22,Crystal structure of SARS-CoV-2 spike stem helix peptide in complex with neutralizing antibody COV30-14,Homo sapiens; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Lee, C.C.D., Lin, T.H., Wilson, I.A.",1.5,X-RAY DIFFRACTION,0.222,0.198,False,True,IGHV1,IGKV3,Kappa,,,,,,8dtr_E_F_J,False
6xmi,E,D,0,F,peptide,,"terminase, large subunit","VIRAL PROTEIN, IMMUNE SYSTEM",06/30/20,Structure of Fab4 bound to P22 TerL(1-33),HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,salmonella phage p22,"Cingolani, G., Lokareddy, R., Ko, Y.",1.51,X-RAY DIFFRACTION,0.203,0.167,False,True,IGHV3,IGKV1,Kappa,,,,,,6xmi_E_D_F,False
9p4c,H,L,0,M,peptide,,"mesothelin, cleaved form",ANTITUMOR PROTEIN,11/12/25,Crystal structure of Mesothelin C-terminal peptide-RO4 Fab complex,Oryctolagus cuniculus; SYNTHETIC CONSTRUCT,oryctolagus cuniculus,oryctolagus cuniculus,homo sapiens,"Zhan, J., Maslanka, C., Xia, D.",1.52,X-RAY DIFFRACTION,0.180,0.149,False,True,IGHV1,IGKV1,Kappa,,,,,,9p4c_H_L_M,False
5ucb,H,L,0,B,protein,,histone chaperone asf1,IMMUNE SYSTEM,12/22/16,Structure of antigen-Fab complex with engineered switch residue region.,HOMO SAPIENS; SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / S288C),homo sapiens,homo sapiens,saccharomyces cerevisiae (strain atcc 204508 /s288c) ,"Bailey, L.J., Kossiakoff, A.A., Chaperone-Enabled Studies of Epigenetic Regulation Enzymes (CEBS)",1.521,X-RAY DIFFRACTION,0.169,0.138,False,True,IGHV3,IGKV1,Kappa,,,,,,5ucb_H_L_B,False
7vyt,B,C,0,A,protein,,t-cell immunoreceptor with ig and itim domains,IMMUNE SYSTEM,11/15/21,Crystal structure of human TIGIT(23-129) in complex with the scFv fragment of anti-TIGIT antibody MG1131,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Jeong, B.-S., Nam, H., Kim, M., Oh, B.-H.",1.53,X-RAY DIFFRACTION,0.219,0.201,False,True,IGHV1,IGKV3,Kappa,,,,,,7vyt_B_C_A,False
7n3d,H,L,0,C,protein,,nucleoprotein,VIRAL PROTEIN,05/31/21,Crystal Structure of Human Fab S24-1564 in the complex with the N-teminal Domain of Nucleocapsid protein from SARS CoV-2,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Kim, Y., Maltseva, N., Tesar, C., Jedrzejczak, R., Dugan, H., Stamper, C., Wilson, P., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)",1.53,X-RAY DIFFRACTION,0.190,0.157,False,True,IGHV4,IGKV1,Kappa,,,,,,7n3d_H_L_C,False
7sd5,H,L,0,A,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,09/29/21,Crystallographic structure of neutralizing antibody 10-40 in complex with SARS-CoV-2 spike receptor binding domain,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Reddem, E.R., Casner, R.G., Shapiro, L.",1.53,X-RAY DIFFRACTION,0.206,0.176,False,True,IGHV4,IGLV6,Lambda,,,,,,7sd5_H_L_A,False
4hs6,H,L,0,Y,peptide,,e2-peptide,IMMUNE SYSTEM,10/29/12,Hepatitus C envelope glycoprotein E2 fragment 412-423 with humanized and affinity-matured antibody MRCT10.v362,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,hepatitis c virus,"Eigenbrot, C., Ultsch, M.",1.53,X-RAY DIFFRACTION,0.200,0.175,False,True,IGHV4,IGKV1,Kappa,3.0000000000000004e-08,-10.26304286359873,Unknown,,TBD,4hs6_H_L_Y,False
7lm9,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,02/05/21,Crystal structure of SARS-CoV spike protein receptor-binding domain in complex with a cross-neutralizing antibody CV38-142 Fab isolated from COVID-19 patient,SARS CORONAVIRUS MA15; HOMO SAPIENS,homo sapiens,homo sapiens,sars coronavirus ma15,"Liu, H., Yuan, M., Zhu, X., Wilson, I.A.",1.53,X-RAY DIFFRACTION,0.192,0.170,False,True,IGHV5,IGKV1,Kappa,,,,,,7lm9_H_L_A,False
9h4r,H,L,0,A,protein,,zona pellucida sperm-binding protein 2,CELL ADHESION,03/12/25,Structure of fertilization-blocking monoclonal antibody IE-3 VHVL bound to the ZP-N1 domain of mouse ZP2 (crystal form I),Mus musculus; Rattus norvegicus,rattus norvegicus,rattus norvegicus,mus musculus,"Dioguardi, E., De Sanctis, D., Jovine, L.",1.53,X-RAY DIFFRACTION,0.233,0.206,False,True,IGHV1,IGKV8,Kappa,,,,,,9h4r_H_L_A,False
4cmh,B,C,0,A,protein,,adp-ribosyl cyclase 1,HYDROLASE/IMMUNE SYSTEM,01/15/14,Crystal structure of CD38 with a novel CD38-targeting antibody  SAR650984,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Deckert, J., Wetzel, M.C., Park, P.U., Bartle, L.M., Skaletskaya, A., Goldmacher, V., Vallee, F., ZhouLiu, Q., Ferrari, P., Pouzieux, S., Lahoute, C., Dumontet, C., Plesa, A., Chiron, M., Lejeune, P., Chittenden, T., Blanc, V.",1.53,X-RAY DIFFRACTION,0.2082,0.1878,False,False,IGHV1,IGKV6,Kappa,2.0000000000000003e-10,-13.23176250178276,Fluorescence,,TBD,4cmh_B_C_A,False
7wsl,H,L,0,D,protein,,programmed cell death protein 1,IMMUNE SYSTEM,08/24/22,PD-1 in complex with Dostarlimab,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Heo, Y.S.",1.534,X-RAY DIFFRACTION,0.178,0.161,False,True,IGHV3,IGKV1,Kappa,,,,,,7wsl_H_L_D,False
8fdd,A,B,0,P,peptide,,circumsporozoite protein npdp peptide,IMMUNE SYSTEM,11/01/23,Crystal structure of Ky15.3 Fab in complex with circumsporozoite protein NPDP peptide,Mus musculus; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,plasmodium falciparum,"Burn Aschner, C., Julien, J.P.",1.54,X-RAY DIFFRACTION,0.204,0.175,False,True,IGHV3,IGKV1,Kappa,,,,,,8fdd_A_B_P,False
9eht,E,D,0,F,protein,,programmed cell death protein 1,IMMUNE SYSTEM,12/03/25,Crystal Structure of PD-1/retifanlimab complex,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Heo, Y.-S.",1.544,X-RAY DIFFRACTION,0.208,0.181,False,True,IGHV1,IGKV3,Kappa,,,,,,9eht_E_D_F,False
7o31,H,L,0,P,peptide,,pas#1 epitope peptide,IMMUNE SYSTEM,04/01/21,Crystal structure of the anti-PAS Fab 1.2 in complex with its epitope peptide and the anti-Kappa VHH domain,MUS MUSCULUS; LAMA GLAMA; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,synthetic construct,"Schilz, J., Schiefner, A., Skerra, A.",1.55,X-RAY DIFFRACTION,0.232,0.194,False,True,IGHV5,IGKV3,Kappa,,,,,,7o31_H_L_P,False
4jg1,H,L,0,P,peptide,,phosphopeptide,immune system,02/28/13,Structure of phosphoserine/threonine (pSTAb) scaffold bound to pThr peptide,ESCHERICHIA COLI; SYNTHETIC CONSTRUCT,,,,"Koerber, J.T., Thomsen, N.D., Hannigan, B.T., Degrado, W.F., Wells, J.A.",1.55,X-RAY DIFFRACTION,0.174,0.151,False,True,IGHV3,IGKV3,Kappa,2.32e-07,-9.051093802733906,Unknown,,TBD,4jg1_H_L_P,False
9eze,E,F,0,D,protein,,duffy receptor,CELL ADHESION,10/29/25,Structure of subdomain 3 of the Plasmodium vivx Duffy binding protein (PvDBP) bound to human antibody DB9,Homo sapiens; Plasmodium vivax Sal-1,homo sapiens,homo sapiens,plasmodium vivax sal-1,"Barber, N.M., Higgins, M.K.",1.55,X-RAY DIFFRACTION,0.223,0.204,False,True,IGHV4,IGKV1,Kappa,,,,,,9eze_E_F_D,False
6x8s,H,L,0,P,peptide,,nand peptide,IMMUNE SYSTEM,06/01/20,Crystal structure of 3D11 Fab in complex with Plasmodium berghei circumsporozoite protein NAND peptide,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,plasmodium berghei anka,"Thai, E., Julien, J.P.",1.55,X-RAY DIFFRACTION,0.185,0.162,False,True,IGHV1,IGKV1,Kappa,,,,,,6x8s_H_L_P,False
8fas,A,B,0,C,peptide,,circumsporozoite protein nanp5 peptide,IMMUNE SYSTEM,11/01/23,Crystal structure of Ky230 Fab in complex with circumsporozoite protein NANP5 peptide,Mus musculus; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,plasmodium falciparum,"Kassardjian, A., Thai, E., Julien, J.P.",1.55,X-RAY DIFFRACTION,0.198,0.165,False,True,IGHV3,IGKV2,Kappa,,,,,,8fas_A_B_C,False
5tkk,H,L,0,A,peptide,,hiv-1 fusion peptide residue 512-519,IMMUNE SYSTEM,10/06/16,Structure of mouse vaccination-elicited HIV neutralizing antibody vFP5.01 in complex with HIV-1 fusion peptide residue 512-519,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,human immunodeficiency virus 1,"Xu, K., Liu, K., Kwong, P.D.",1.55,X-RAY DIFFRACTION,0.247,0.209,False,True,IGHV3,IGKV6,Kappa,5.2900000000000006e-09,-11.291226680167965,Unknown,,TBD,5tkk_H_L_A,False
6pdr,H,L,0,A,peptide,,hiv fusion peptide residue 512-519,IMMUNE SYSTEM,06/19/19,Vaccine-elicited murine FP-targeting antibody vFP25.18 in complex with HIV fusion peptide (residue 512-519),MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,human immunodeficiency virus 1,"Xu, K., Liu, K., Wang, Y., Kwong, P.D.",1.555,X-RAY DIFFRACTION,0.200,0.175,False,True,IGHV1,IGKV1,Kappa,,,,,,6pdr_H_L_A,False
6pxr,H,L,0,A,peptide,,microtubule-associated protein tau,IMMUNE SYSTEM,07/26/19,Anti-TAU BIIB092 FAB with TAU peptide,MUS MUSCULUS; HOMO SAPIENS,mus musculus,mus musculus,homo sapiens,"Arndt, J.W., Quan, C.",1.556,X-RAY DIFFRACTION,0.268,0.228,False,True,IGHV5,IGKV1,Kappa,,,,,,6pxr_H_L_A,False
9q1l,A,B,0,C,peptide,,vicilin jug r 2.0102 hairpinin alpha 4,ALLERGEN/IMMUNE SYSTEM,01/21/26,Crystal structure of the walnut allergen Jug r 2 bound to the human-derived Fab 6D12,Homo sapiens; Juglans regia,homo sapiens,homo sapiens,juglans regia,"Pedersen, L.C., Lytle, I.R., Mueller, G.A., Croote, D.C.",1.56,X-RAY DIFFRACTION,0.195,0.168,False,True,IGHV4,IGKV1,Kappa,,,,,,9q1l_A_B_C,False
4yo0,A,B,0,E,peptide,,pa14 peptide,IMMUNE SYSTEM,03/11/15,Crystal structure of monoclonal anti-human podoplanin antibody NZ-1 with bound PA peptide,RATTUS NORVEGICUS; SYNTHETIC CONSTRUCT,rattus norvegicus,rattus norvegicus,homo sapiens,"Fujii, Y., Kitago, Y., Arimori, T., Takagi, J.",1.56,X-RAY DIFFRACTION,0.214,0.179,False,True,IGHV5,IGLV3,Lambda,,,,,,4yo0_A_B_E,False
9pi9,C,D,0,F,protein,,tumor-associated calcium signal transducer 2,SIGNALING PROTEIN,12/10/25,Sacituzumab Fab bound to Trop2 Dimer,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Ferrao, R.F., Lansdon, E.B.",1.56,X-RAY DIFFRACTION,0.211,0.181,False,True,IGHV7,IGKV6,Kappa,,,,,,9pi9_C_D_F,False
7v64,B,A,0,C,peptide,,mucin-1 subunit alpha,IMMUNE SYSTEM,08/24/22,Crystal structure of Antibody 16A in complex with MUC1 Glycopeptide(GlycoT),Mus musculus; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Niu, J., Xu, L., Meng, B., Han, Y.B., Yang, B.",1.56,X-RAY DIFFRACTION,0.203,0.179,False,True,IGHV4,IGLV1,Lambda,,,,,,7v64_B_A_C,False
6pbv,D,C,0,I,peptide,,junctional peptide,IMMUNE SYSTEM,06/14/19,Crystal structure of Fab668 complex,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,plasmodium falciparum 3d7,"Oyen, D., Wilson, I.A.",1.566,X-RAY DIFFRACTION,0.212,0.177,False,True,IGHV1,IGLV2,Lambda,,,,,,6pbv_D_C_I,False
9bx5,H,L,0,P,peptide,,p4 peptide from outer surface protein c,IMMUNE SYSTEM,08/27/25,Human Fab 8C1 in complex with OspCA peptide P4 (residues 141-144),Borreliella burgdorferi; Homo sapiens,homo sapiens,homo sapiens,borreliella burgdorferi,"Rudolph, M.J., Mantis, N.",1.57,X-RAY DIFFRACTION,0.170,0.142,False,True,IGHV1,IGKV1,Kappa,,,,,,9bx5_H_L_P,False
9dq4,H,L,0,A,protein,,cytotoxic t-lymphocyte protein 4,ANTITUMOR PROTEIN/IMMUNE SYSTEM,02/05/25,Crystal structure of engineered Ipilimumab (mipi.4) Fab in complex with mouse CTLA-4,Homo sapiens; Mus musculus,homo sapiens,homo sapiens,mus musculus,"Diong, S.J., Lee, P.S.",1.57,X-RAY DIFFRACTION,0.233,0.205,False,True,IGHV3,IGKV3,Kappa,,,,,,9dq4_H_L_A,False
6svl,A,B,0,C,protein,,myeloid-derived growth factor,CYTOKINE,09/18/19,human Myeloid-derived growth factor (MYDGF) in complex with neutralizing Fab,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Ebenhoch, R., Nar, H.",1.58,X-RAY DIFFRACTION,0.206,0.181,False,True,IGHV14,IGKV12,Kappa,,,,,,6svl_A_B_C,False
9njy,H,L,0,A,protein,,clumping factor a,IMMUNE SYSTEM,07/30/25,Terminal two domains of ClfA002 with bound Fab of AZD7745,Mammalia; Staphylococcus aureus,mammalia,mammalia,staphylococcus aureus,"Oganesyan, V.Y.",1.58,X-RAY DIFFRACTION,0.219,0.199,False,True,IGHV4,IGKV1,Kappa,,,,,,9njy_H_L_A,False
5myo,B,A,0,E,peptide,,amyloid beta a4 protein,IMMUNE SYSTEM,01/27/17,Structure of Pyroglutamate-Abeta-specific Fab c#6 in complex with human Abeta-pE3-12-PEGb,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Parthier, C., Piechotta, A., Stubbs, M.T.",1.59,X-RAY DIFFRACTION,0.215,0.178,False,True,IGHV1,IGKV1,Kappa,2.93e-11,-14.369763591907674,Unknown,,TBD,5myo_B_A_E,False
3g5y,B,A,0,E,peptide,,egfr peptide,IMMUNE SYSTEM,02/05/09,Antibodies Specifically Targeting a Locally Misfolded Region of Tumor Associated EGFR,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,,"Garrett, T.P.J., Burgess, A.W.",1.59,X-RAY DIFFRACTION,0.250,0.196,False,True,IGHV3,IGKV14,Kappa,1.54e-07,-9.29,SPR,25.0,19289842,3g5y_B_A_E,False
3bkj,H,L,0,A,peptide,,amyloid beta peptide,IMMUNE SYSTEM,12/06/07,Crystal structure of Fab wo2 bound to the n terminal domain of amyloid beta peptide (1-16),MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,,"Miles, L.A., Wun, K.S., Crespi, G.A., Fodero-Tavoletti, M., Galatis, D., Bageley, C.J., Beyreuther, K., Masters, C.L., Cappai, R., McKinstry, W.J., Barnham, K.J., Parker, M.W.",1.59,X-RAY DIFFRACTION,0.231,0.188,False,False,IGHV8,IGKV1,Kappa,,,,,,3bkj_H_L_A,False
3bae,H,L,0,A,peptide,,amyloid beta peptide,IMMUNE SYSTEM,11/07/07,Crystal structure of Fab WO2 bound to the N terminal domain of Amyloid beta peptide (1-28),MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,,"Miles, L.A., Wun, K.S., Crespi, G.A., Parker, M.W.",1.593,X-RAY DIFFRACTION,0.250,0.207,False,False,IGHV8,IGKV1,Kappa,,,,,,3bae_H_L_A,False
6wg0,H,L,0,P,peptide,,npna3 peptide,IMMUNE SYSTEM,04/04/20,Crystal structure of Fab366 in complex with NPNA3 peptide from circumsporozoite protein,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,plasmodium falciparum,"Pholcharee, T., Oyen, D., Wilson, I.A.",1.599,X-RAY DIFFRACTION,0.211,0.189,False,True,IGHV1,IGKV1,Kappa,,,,,,6wg0_H_L_P,False
4n8c,I,M,0,Y,peptide,,extracellular domain of influenza matrix protein 2,IMMUNE SYSTEM,10/17/13,Three-dimensional structure of the extracellular domain of Matrix protein 2 of influenza A virus,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,influenza a virus (a/puerto rico/8/1934(h1n1)),"Cho, K.J., Seok, J.H., Kim, S., Roose, K., Schepens, B., Fiers, W., Saelens, X., Kim, K.H.",1.6,X-RAY DIFFRACTION,0.242,0.193,False,False,IGHV1,IGKV8,Kappa,4.0000000000000007e-10,-12.821084109462982,Unknown,,TBD,4n8c_I_M_Y,False
5myk,B,A,0,C,peptide,,amyloid beta a4 protein,IMMUNE SYSTEM,01/26/17,Structure of Pyroglutamate-Abeta-specific Fab c#17 in complex with murine Abeta-pE3-18PEGb,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,mus musculus,"Parthier, C., Piechotta, A., Stubbs, M.T.",1.6,X-RAY DIFFRACTION,0.210,0.173,False,True,IGHV5,IGKV1,Kappa,9.9e-10,-12.284151464664008,Unknown,,TBD,5myk_B_A_C,False
8up2,A,B,0,C,protein,,"factor h binding protein, sequence variant id 1",IMMUNE SYSTEM,10/16/24,Murine Fab JAR 4 bound to meningococcal Factor H binding protein,Mus musculus; Neisseria meningitidis,mus musculus,mus musculus,neisseria meningitidis,"Beernink, P.T., Beernink, B.P.",1.6,X-RAY DIFFRACTION,0.212,0.187,False,True,IGHV1,IGKV1,Kappa,,,,,,8up2_A_B_C,False
6azm,B,A,0,E,peptide,,circumsporozoite protein nanp 5-mer,IMMUNE SYSTEM,09/11/17,Crystal structure of the 580 germline antibody bound to circumsporozoite protein NANP 5-mer,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,plasmodium falciparum,"Scally, S.W., Bosch, A., Triller, G., Wardemann, H., Julien, J.P.",1.6,X-RAY DIFFRACTION,0.199,0.166,False,True,IGHV3,IGKV4,Kappa,,,,,,6azm_B_A_E,False
6plh,B,A,0,C,peptide,,interleukin-21 receptor,IMMUNE SYSTEM,06/30/19,FAB fragment complexed with C-mannosylated tryptophan peptide,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"John, A., Jarva, M.A., Goddard-Borger, E.D.",1.6,X-RAY DIFFRACTION,0.221,0.189,False,False,IGHV1,IGKV1,Kappa,,,,,,6plh_B_A_C,False
4hha,B,A,0,P,peptide,,glycoprotein b,IMMUNE SYSTEM,10/09/12,Anti-Human Cytomegalovirus (HCMV) Fab KE5 with epitope peptide AD-2S1,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,human herpesvirus 5,"Bryson, S., Risnes, L., Damgupta, S., Thomson, C.A., Pfoh, R., Schrader, J.W., Pai, E.F.",1.6,X-RAY DIFFRACTION,0.226,0.213,False,False,IGHV3,IGKV3,Kappa,,,,,,4hha_B_A_P,False
3uji,H,L,0,P,peptide,,envelope glycoprotein gp160,IMMUNE SYSTEM,11/07/11,Crystal structure of anti-HIV-1 V3 Fab 2558 in complex with MN peptide,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,hiv-1 m,"Kong, X.P.",1.6,X-RAY DIFFRACTION,0.194,0.161,False,False,IGHV5,IGLV3,Lambda,,,,,,3uji_H_L_P,False
6ldw,B,A,0,D,peptide,,ile-phe-glu-lys-phe-gly-m3l-gly-gly,IMMUNE SYSTEM,11/23/19,Structure of antibody C9 in complex with methylated peptide,ORYCTOLAGUS CUNICULUS; SYNTHETIC CONSTRUCT,oryctolagus cuniculus,oryctolagus cuniculus,homo sapiens,"Caaveiro, J.M.M., Tsumoto, K.",1.6,X-RAY DIFFRACTION,0.235,0.171,False,True,IGHV1,IGKV1,Kappa,,,,,,6ldw_B_A_D,False
8gho,A,B,0,C,peptide,,guanylyl cyclase c peptide,PROTEIN BINDING,08/30/23,GUCY2C-peptide bound to anti-GUCY2C-scFv antibody,Homo sapiens; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,homo sapiens,"Mosyak, L.",1.6,X-RAY DIFFRACTION,0.217,0.197,True,True,IGHV3,IGKV1,Kappa,,,,,,8gho_A_B_C,False
8dtx,H,L,0,I,peptide,,spike protein s2' stem helix peptide,IMMUNE SYSTEM,11/23/22,Crystal structure of SARS-CoV-2 spike stem helix peptide in complex with neutralizing antibody COV89-22,Homo sapiens; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Lin, T.H., Lee, C.C.D., Wilson, I.A.",1.6,X-RAY DIFFRACTION,0.210,0.185,False,True,IGHV1,IGKV3,Kappa,,,,,,8dtx_H_L_I,False
4tqe,H,L,0,A,peptide,,microtubule-associated protein tau,IMMUNE SYSTEM,06/11/14,Structure of tau peptide in complex with Tau5 antibody Fab fragment,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Cehlar, O., Skrabana, R., Novak, M.",1.6,X-RAY DIFFRACTION,0.197,0.151,False,False,IGHV14,IGKV1,Kappa,,,,,,4tqe_H_L_A,False
6bzy,H,L,0,B,peptide,,e2 as412 peptide,IMMUNE SYSTEM,12/26/17,Structure of the Hepatitis C virus envelope glycoprotein E2 antigenic region 412-423 bound to the 22D11 broadly neutralizing antibody,MUS MUSCULUS; HEPACIVIRUS C,mus musculus,mus musculus,hepacivirus c,"Tzarum, N., Alemn, F., Wilson, I.A., Law, M.",1.6,X-RAY DIFFRACTION,0.218,0.188,False,True,IGHV2,IGKV3,Kappa,,,,,,6bzy_H_L_B,False
3pp4,H,L,0,P,peptide,,b-lymphocyte antigen cd20,IMMUNE SYSTEM,11/24/10,Epitope characterization and crystal structure of GA101 provide insights into the molecular basis for the type I / type II distinction of anti- CD20 antibodies,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Hopfner, K.-P., Lammens, A.",1.6,X-RAY DIFFRACTION,0.187,0.137,False,True,IGHV1,IGKV2D,Kappa,7e-06,,ITC,25.0,21444918,3pp4_H_L_P,False
5ock,H,L,0,A,peptide,,cep1 peptide (from enolase),IMMUNE SYSTEM,07/03/17,Crystal structure of ACPA E4 in complex with CEP1,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,homo sapiens,"Dobritzsch, D., Ge, C., Holmdahl, R.",1.6,X-RAY DIFFRACTION,0.218,0.183,False,True,IGHV4,IGLV1,Lambda,,,,,,5ock_H_L_A,False
6mvl,H,L,0,A,protein,,v-type immunoglobulin domain-containing suppressor of t-cell activation ,IMMUNE SYSTEM,10/26/18,Crystal structure of VISTA bound to a pH-selective antibody Fab fragment,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Critton, D.A.",1.61,X-RAY DIFFRACTION,0.225,0.182,False,True,IGHV3,IGKV3,Kappa,,,,,,6mvl_H_L_A,False
7sjs,H,L,0,C,peptide,,stem helix peptide of spike protein s2',IMMUNE SYSTEM,10/18/21,Crystal structure of SARS-CoV-2 spike stem helix peptide in complex with neutralizing antibody CC40.8,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Yuan, M., Wilson, I.A.",1.612,X-RAY DIFFRACTION,0.206,0.174,False,True,IGHV3,IGLV3,Lambda,,,,,,7sjs_H_L_C,False
8bbh,H,L,0,A,peptide,,glucose-6-phosphate isomerase,IMMUNE SYSTEM,12/21/22,The crystal structure of a mouse Fab fragment TL1 in complex with a human Glucose-6-phosphate isomerase peptide 293-307,Mus musculus; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Changrong, G., Rikard, H., Taotao, L.",1.619,X-RAY DIFFRACTION,0.229,0.198,False,False,IGHV9,IGKV1,Kappa,,,,,,8bbh_H_L_A,False
6ba5,D,C,0,N,protein,,inactive tyrosine-protein kinase transmembrane receptorror1 ,IMMUNE SYSTEM,10/12/17,Potent and Selective Antitumor Activity of a T-Cell Engaging Bispecific Antibody Targeting a Membrane-Proximal Epitope of ROR1,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Park, H., Rader, C.",1.62,X-RAY DIFFRACTION,0.214,0.194,False,True,IGHV1,IGKV1,Kappa,,,,,,6ba5_D_C_N,False
5sy8,H,L,0,O,protein,,10e8 epitope scaffold t117v2,IMMUNE SYSTEM,08/10/16,Crystal structure of the complex of 10E8 Fab light chain mutant1 and T117v2 HIV-1 MPER scaffold,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,synthetic construct,"Irimia, A., Wilson, I.A.",1.62,X-RAY DIFFRACTION,0.214,0.172,False,True,IGHV3,IGLV3,Lambda,1.1199999999999999e-11,-14.939539586992543,SPR,,TBD,5sy8_H_L_O,False
8yhz,H,L,0,P,peptide,,sodium channel protein type 9 subunit alpha,MEMBRANE PROTEIN/IMMUNE SYSTEM,10/23/24,The co-crystal structure of the Fab fragment of Ab-1080 with NaV1.7 VSDII peptide,Oryctolagus cuniculus; SYNTHETIC CONSTRUCT,oryctolagus cuniculus,oryctolagus cuniculus,homo sapiens,"Juanjuan, D., Yaning, Z., Rui, Z., Yanchao, D.",1.62,X-RAY DIFFRACTION,0.210,0.194,False,True,IGHV1,IGKV1,Kappa,,,,,,8yhz_H_L_P,False
4j6r,H,L,0,G,protein,,envelope glycoprotein gp160,viral protein/immune system,02/11/13,Crystal structure of broadly and potently neutralizing antibody VRC23 in complex with HIV-1 gp120,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Zhou, T., Moquin, S., Kwong P.D.",1.64,X-RAY DIFFRACTION,0.198,0.164,False,True,unknown,IGKV3,Kappa,,,,,,4j6r_H_L_G,False
3v4u,H,L,0,P,peptide,,"h-2 class i histocompatibility antigen, l-d alpha chain",IMMUNE SYSTEM,12/15/11,Structure of a monoclonal antibody complexed with its MHC-I antigen,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,mus musculus,"Margulies, D.H., Mage, M.G., Wang, R., Natarajan, K.",1.64,X-RAY DIFFRACTION,0.251,0.213,False,False,IGHV5,IGKV1,Kappa,,,,,,3v4u_H_L_P,False
8f60,A,B,0,C,protein,,b- and t-lymphocyte attenuator,IMMUNE SYSTEM,05/24/23,anti-BTLA monoclonal antibody r23C8 in complex with BTLA,Homo sapiens; Oryctolagus cuniculus,oryctolagus cuniculus,oryctolagus cuniculus,homo sapiens,"Hendle, J., Atwell, S., Lieu, R., Hickey, M., Weichert, K.",1.64,X-RAY DIFFRACTION,0.205,0.181,False,True,IGHV1,IGKV1,Kappa,,,,,,8f60_A_B_C,False
7vux,H,L,0,A,protein,,programmed cell death protein 1,IMMUNE SYSTEM,11/04/21,Complex structure of PD1 and 609A-Fab,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Huang, H., Zhu, Z., Zhao, J., Jiang, L., Yang, H., Deng, L., Meng, X., Ding, J., Yang, S., Zhao, L., Xu, W., Wang, X.",1.64,X-RAY DIFFRACTION,0.202,0.160,False,True,IGHV5,IGKV3,Kappa,,,,,,7vux_H_L_A,False
6x1u,A,B,0,C,peptide,,aclyana-3-ptza peptide,IMMUNE SYSTEM,05/19/20,Structure of pHis Fab (SC39-4) in complex with pHis mimetic peptide,ORYCTOLAGUS CUNICULUS; SYNTHETIC CONSTRUCT,oryctolagus cuniculus,oryctolagus cuniculus,synthetic construct,"Kalagiri, R., Stanfield, R., Wilson, I.A., Hunter, T.",1.641,X-RAY DIFFRACTION,0.225,0.189,False,True,IGHV1,IGKV1,Kappa,,,,,,6x1u_A_B_C,False
6x1s,C,D,0,J,peptide,,nm23-1-ptza peptide,IMMUNE SYSTEM,05/19/20,Structure of pHis Fab (SC1-1) in complex with pHis mimetic peptide,ORYCTOLAGUS CUNICULUS; SYNTHETIC CONSTRUCT,oryctolagus cuniculus,oryctolagus cuniculus,synthetic construct,"Kalagiri, R., Stanfield, R.L., Wilson, I.A., Hunter, T.",1.65,X-RAY DIFFRACTION,0.226,0.200,False,True,IGHV1,IGKV1,Kappa,,,,,,6x1s_C_D_J,False
7q4q,D,C,0,F,peptide,,lrg1 epitope,IMMUNE SYSTEM,11/01/21,Magacizumab Fab fragment in complex with human LRG1 epitope,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Gutierrez-Fernandez, J., Luecke, H.",1.65,X-RAY DIFFRACTION,0.207,0.183,False,False,IGHV1,IGKV3,Kappa,,,,,,7q4q_D_C_F,False
4nzr,H,L,0,M,protein,,protein m td,IMMUNE SYSTEM/PROTEIN BINDING,12/12/13,Crystal structure of the antibody-binding region of Protein M (Protein M TD) in complex with anti-HIV antibody PGT135 Fab,HOMO SAPIENS; MYCOPLASMA GENITALIUM,homo sapiens,homo sapiens,mycoplasma genitalium,"Zhu, X., Wilson, I.A.",1.65,X-RAY DIFFRACTION,0.186,0.154,False,True,IGHV4,IGKV3,Kappa,,,,,,4nzr_H_L_M,False
8duz,C,D,0,E,peptide,,mimetic peptide,IMMUNE SYSTEM,07/05/23,Protective antibody against gonococcal lipooligosaccharide bound to peptide mimetic,Mus musculus; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,bacteriophage sp.,"Beernink, P.T., Beernink, B.P., Rice, P.A., Ram, S.",1.65,X-RAY DIFFRACTION,0.234,0.189,False,True,IGHV1,IGLV1,Lambda,,,,,,8duz_C_D_E,False
2v17,H,L,0,A,peptide,,peptide fragment,IMMUNE SYSTEM,05/22/07,Structure of the complex of antibody MN423 with a fragment of tau  protein,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Sevcik, J., Skrabana, R., Csokova, N., Dvorsky, R., Novak, M.",1.65,X-RAY DIFFRACTION,0.218,0.156,False,False,IGHV7,IGKV16,Kappa,,,,,,2v17_H_L_A,False
2ipu,G,K,0,P,peptide,,abeta 1-8 peptide,IMMUNE SYSTEM,10/12/06,PFA1 Fab fragment complexed with Abeta 1-8 peptide,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,,"Gardberg, A.S., Dealwis, C.",1.65,X-RAY DIFFRACTION,0.225,0.182,False,False,IGHV8,IGKV1,Kappa,,,,,,2ipu_G_K_P,False
5fgb,E,B,0,G,peptide,,genome polyprotein,IMMUNE SYSTEM,12/20/15,Three dimensional structure of broadly neutralizing human anti - Hepatitis C virus (HCV) glycoprotein E2 Fab fragment HC33.4,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,hepatitis c virus genotype 1a (isolate h),"Girard-Blanc, C., Rey, F.A., Krey, T.",1.65,X-RAY DIFFRACTION,0.190,0.171,False,True,IGHV3,IGLV3,Lambda,,,,,,5fgb_E_B_G,False
6k65,H,L,0,A,protein,,immunoglobulin g-binding protein a,STRUCTURAL PROTEIN,06/01/19,Application of anti-helix antibodies in protein structure determination (9014-1P4B),STAPHYLOCOCCUS AUREUS (STRAIN NCTC 8325); MUS MUSCULUS,mus musculus,mus musculus,staphylococcus aureus (strain nctc 8325),"Lee, J.O., Jin, M.S., Kim, J.W., Kim, S., Lee, H., Cho, G.Y.",1.65,X-RAY DIFFRACTION,0.192,0.170,False,True,IGHV2,IGLV1,Lambda,,,,,,6k65_H_L_A,False
5kvd,H,L,0,E,protein,,zika envelope diii,VIRAL PROTEIN/IMMUNE SYSTEM,07/14/16,"Zika specific antibody, ZV-2, bound to ZIKA envelope DIII",ZIKA VIRUS; MUS MUSCULUS,mus musculus,mus musculus,zika virus,"Zhao, H., Nelson, C.A., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID)",1.65,X-RAY DIFFRACTION,0.221,0.190,False,False,IGHV1,IGKV8,Kappa,2.66e-07,-8.97006636439889,SPR,,TBD,5kvd_H_L_E,False
5ob5,H,L,0,A,protein,,c-x-c motif chemokine 2,IMMUNE SYSTEM,06/26/17,fAb complex with GroBeta. AbVance: increasing our knowledge of antibody structural space to enable faster and better decision-making in antibody drug discovery.,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Zhao, B., Ward, P., Convery, M.A.",1.65,X-RAY DIFFRACTION,0.195,0.168,False,True,IGHV1,IGKV14,Kappa,,,,,,5ob5_H_L_A,False
5nmv,H,L,0,K,protein,,tissue factor pathway inhibitor,IMMUNE SYSTEM,04/07/17,Crystal structure of 2F22 Fab fragment against TFPI1,MUS; HOMO SAPIENS,mus,mus,homo sapiens,"Svensson, L.A., Petersen, H.H.",1.65,X-RAY DIFFRACTION,0.202,0.175,False,True,IGHV2,IGKV6,Kappa,1e-09,-12.27819680469229,SPR,,TBD,5nmv_H_L_K,False
9m5b,A,B,0,C,protein,,low affinity immunoglobulin gamma fc region receptor ii-b,IMMUNE SYSTEM,12/17/25,A Human Fc Receptor Ectodomain in Complex With a Fab,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Zhao, Z., Wang, H., Duan, Y., Zhang, H., Yang, H.",1.66,X-RAY DIFFRACTION,0.218,0.189,False,True,IGHV3,IGKV1,Kappa,,,,,,9m5b_A_B_C,False
4al8,H,L,0,C,protein,,envelope protein,IMMUNE SYSTEM,03/02/12,Structure of Dengue virus DIII in complex with Fab 2H12,DENGUE VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,dengue virus,"Midgley, C.M., Flanagan, A., Mongkolsapaya, J., Grimes, J.M., Screaton, G.R.",1.66,X-RAY DIFFRACTION,0.1975,0.1699,False,False,IGHV1,IGKV6,Kappa,4.5000000000000005e-10,-12.751299583055715,ELISA,,TBD,4al8_H_L_C,False
8s6m,I,M,0,R,protein,,spike protein s1,VIRAL PROTEIN,10/23/24,SARS-CoV-2 BQ.1.1 RBD bound to the S2V29 and the S2H97 Fab fragments,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Errico, J.M., Park, Y.J., Rietz, T., Czudnochowski, N., Nix, J.C., Cameroni, E., Corti, D., Snell, G., Marco, A.D., Pinto, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler, D.",1.67,X-RAY DIFFRACTION,0.203,0.184,False,True,IGHV5,IGLV2,Lambda,,,,,,8s6m_I_M_R,False
8s6m,H,L,0,R,protein,,spike protein s1,VIRAL PROTEIN,10/23/24,SARS-CoV-2 BQ.1.1 RBD bound to the S2V29 and the S2H97 Fab fragments,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Errico, J.M., Park, Y.J., Rietz, T., Czudnochowski, N., Nix, J.C., Cameroni, E., Corti, D., Snell, G., Marco, A.D., Pinto, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler, D.",1.67,X-RAY DIFFRACTION,0.203,0.184,False,True,IGHV3,IGLV2,Lambda,,,,,,8s6m_H_L_R,False
2otu,B,A,0,P,peptide,,peptide antigen,IMMUNE SYSTEM,02/09/07,Crystal structure of Fv polyglutamine complex,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,,"Li, P.",1.68,X-RAY DIFFRACTION,0.214,0.200,False,True,IGHV5,IGLV3,Lambda,,,,,,2otu_B_A_P,False
6vbo,H,L,0,C,peptide,,envelope glycoprotein gp160,IMMUNE SYSTEM/VIRAL PROTEIN,12/19/19,Crystal structure of anti-HIV-1 antibody DH813 bound to gp120 V2 peptide,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Janus, B.M., Ofek, G.",1.683,X-RAY DIFFRACTION,0.208,0.175,False,True,IGHV5,IGKV2,Kappa,,,,,,6vbo_H_L_C,False
5mo3,H,L,0,A,peptide,,microtubule-associated protein tau,IMMUNE SYSTEM,12/13/16,Crystal structure of DC8E8 Fab in the complex with a 14-mer tau peptide at pH 8.5,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Skrabana, R., Novak, M.",1.69,X-RAY DIFFRACTION,0.235,0.189,False,False,IGHV1,IGKV8,Kappa,,,,,,5mo3_H_L_A,False
4xvt,H,L,0,G,protein,,envelope glycoprotein gp120 of hiv-1 clade a/e,Viral protein/Immune System,01/28/15,Crystal structure of HIV-1 93TH057 coreE gp120 with antibody 45-VRC01.H01+07.O-863513/45-VRC01.L01+07.O-110653 (VRC07_1995),HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Joyce, M.G., Mascola, J.R., Kwong, P.D.",1.69,X-RAY DIFFRACTION,0.222,0.181,False,True,unknown,IGKV3,Kappa,,,,,,4xvt_H_L_G,False
8jyr,H,L,0,A,protein,,receptor tyrosine-protein kinase erbb-2,IMMUNE SYSTEM,03/13/24,Crystal structure of anti-HER2 antibody H2Mab-119 in complex with HER2 domain I,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Arimori, T., Takagi, J.",1.69,X-RAY DIFFRACTION,0.209,0.173,False,True,IGHV1,IGKV3,Kappa,,,,,,8jyr_H_L_A,False
8fb8,H,L,0,P,peptide,,circumsporozoite protein kqpa peptide,IMMUNE SYSTEM,11/01/23,Crystal structure of Ky15.10-Y100EK Fab in complex with circumsporozoite protein KQPA peptide,Mus musculus; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,plasmodium falciparum,"Kang, R.W., Thai, E., Julien, J.P.",1.69,X-RAY DIFFRACTION,0.184,0.160,False,True,IGHV3,IGKV1,Kappa,,,,,,8fb8_H_L_P,False
4hpo,H,L,0,P,peptide,,envelope glycoprotein gp160,Immune System/Viral Protein,10/24/12,Crystal structure of RV144-elicited antibody CH58 in complex with V2 peptide,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,human immunodeficiency virus 1,"McLellan, J.S., Gorman, J., Haynes, B.F., Kwong, P.D.",1.694,X-RAY DIFFRACTION,0.211,0.185,False,True,IGHV5,IGLV6,Lambda,,,,,,4hpo_H_L_P,False
6otc,H,L,0,A,protein,,polymerase cofactor vp35,VIRAL PROTEIN/IMMUNE SYSTEM,05/02/19,Synthetic Fab bound to Marburg virus VP35 interferon inhibitory domain,LAKE VICTORIA MARBURGVIRUS (STRAIN POPP-67); SYNTHETIC CONSTRUCT,synthetic construct,synthetic construct,lake victoria marburgvirus (strain popp-67),"Amatya, P., Chen, G., Borek, D., Sidhu, S.S., Leung, D.W.",1.7,X-RAY DIFFRACTION,0.233,0.196,False,True,IGHV3,IGKV1,Kappa,,,,,,6otc_H_L_A,False
7ox3,A,B,0,C,protein,,interleukin-9,CYTOKINE,12/28/22,Fab 6D3: hIL-9 complex,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"De Vos, T., Savvides, S.N.",1.7,X-RAY DIFFRACTION,0.211,0.176,False,True,IGHV4,IGLV3,Lambda,,,,,,7ox3_A_B_C,False
3mly,H,L,0,P,peptide,,hiv-1 gp120 third variable region (v3) crown,IMMUNE SYSTEM,04/18/10,Crystal structure of anti-HIV-1 V3 Fab 3074 in complex with a UR29 V3 peptide,HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Kong, X.-P.",1.7,X-RAY DIFFRACTION,0.215,0.181,False,False,IGHV4,IGLV1,Lambda,,,,,,3mly_H_L_P,False
7lcv,A,B,0,C,protein,,factor h binding protein,IMMUNE SYSTEM,01/11/21,Factor H enhancing human antibody fragment (Fab) to meningococcal Factor H binding protein,HOMO SAPIENS; NEISSERIA MENINGITIDIS,homo sapiens,homo sapiens,neisseria meningitidis,"Beernink, P.T., Sands, N.",1.7,X-RAY DIFFRACTION,0.270,0.240,False,True,IGHV3,IGKV3,Kappa,,,,,,7lcv_A_B_C,False
3ggw,D,C,0,F,peptide,,peptide b1,IMMUNE SYSTEM,03/02/09,Crystal Structure of FAB F22-4 in complex with a Carbohydrate-mimetic peptide,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,,"Saul, F.A., Vulliez-Le Normand, B., Bentley, G.A.",1.7,X-RAY DIFFRACTION,0.245,0.197,False,False,IGHV6,IGKV2,Kappa,2.9e-06,-7.55,ITC,25.0,19328810,3ggw_D_C_F,False
7n05,H,L,0,E,peptide,,hiv-1 gp41 immunodominant region,IMMUNE SYSTEM,05/25/21,Crystal structure of the F240 antibody fragment bound to the HIV-1 gp41 immunodominant region,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,hiv-1 06tg.ht008,"Cook, J.D., Lee, J.E.",1.7,X-RAY DIFFRACTION,0.204,0.172,False,True,unknown,IGKV4,Kappa,,,,,,7n05_H_L_E,False
1uac,H,L,0,Y,protein,,lysozyme c,IMMUNE SYSTEM/HYDROLASE,03/08/03,Crystal Structure of HYHEL-10 FV MUTANT SFSF Complexed with TURKEY WHITE LYSOZYME,MUS MUSCULUS; MELEAGRIS GALLOPAVO,mus musculus,mus musculus,meleagris gallopavo,"Kumagai, I., Nishimiya, Y., Kondo, H., Tsumoto, K.",1.7,X-RAY DIFFRACTION,unknown,unknown,False,True,IGHV3,IGKV5,Kappa,,,,,,1uac_H_L_Y,False
8f9u,A,B,0,P,peptide,,circumsporozoite protein npdp peptide,IMMUNE SYSTEM,11/01/23,Crystal structure of Ky15.7 Fab in complex with circumsporozoite protein NPDP peptide,Mus musculus; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,plasmodium falciparum,"Thai, E., Julien, J.P.",1.7,X-RAY DIFFRACTION,0.230,0.208,False,True,IGHV3,IGKV1,Kappa,,,,,,8f9u_A_B_P,False
8ts0,H,L,0,A,protein,,asialoglycoprotein receptor 1,SUGAR BINDING PROTEIN/IMMUNE SYSTEM,06/19/24,Crystal Structure of human ASGR1 CRD (Carbohydrate Recognition Domain) bound to 8M24 Fab,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Sampathkumar, P., Li, Y.",1.7,X-RAY DIFFRACTION,0.205,0.173,False,True,IGHV1,IGKV1,Kappa,,,,,,8ts0_H_L_A,False
5nph,H,L,0,A,peptide,,genome polyprotein,IMMUNE SYSTEM,04/16/17,Structure of the Hepatitis C virus strain J4 glycoprotein E2 antigenic region 532-540 bound to the Fab fragment of the non-neutralizing antibody DAO5,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,hepatitis c virus,"Vasiliauskaite, I., Rey, F.A., Krey, T.",1.7,X-RAY DIFFRACTION,0.203,0.179,False,True,IGHV1,IGKV5,Kappa,,,,,,5nph_H_L_A,False
6k0y,A,B,0,C,protein,,programmed cell death protein 1,IMMUNE SYSTEM,05/08/19,"Study of the interactions of a novel monoclonal antibody, mAb059c, with the hPD-1 receptor",HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Liu, J.X., Wang, G.Q.",1.7,X-RAY DIFFRACTION,0.214,0.171,False,True,IGHV4,IGKV1,Kappa,,,,,,6k0y_A_B_C,False
6x7w,A,C,0,D,peptide,,hiv fusion peptide 512-519,IMMUNE SYSTEM/VIRAL PROTEIN,05/30/20,Vaccine-elicited mouse FP-targeting neutralizing antibody vFP49.02 in complex with HIV fusion peptide (residue 512-519),MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,human immunodeficiency virus 1,"Xu, K., Kwong, P.D.",1.7,X-RAY DIFFRACTION,0.248,0.214,False,True,IGHV5,IGKV5,Kappa,,,,,,6x7w_A_C_D,False
8oxw,B,C,0,A,protein,,protein-glutamine gamma-glutamyltransferase e 27 kda non-catalytic chain ,TRANSFERASE,10/18/23,Transglutaminase 3 in complex with DH patient-derived Fab DH63-B02,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Heggelund, J.E., Sollid, L.M.",1.7,X-RAY DIFFRACTION,0.210,0.172,False,True,IGHV3,IGLV6,Lambda,,,,,,8oxw_B_C_A,False
5ye3,B,A,0,C,peptide,,di-acetylated histone h4,NUCLEAR PROTEIN,09/15/17,Crystal structure of the complex of di-acetylated histone H4 and 2A7D9 Fab fragment,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Matsuda, T., Ito, T., Wakamori, M., Umehara, T.",1.7,X-RAY DIFFRACTION,0.195,0.166,False,True,IGHV9,IGKV19,Kappa,,,,,,5ye3_B_A_C,False
6mtt,H,L,0,P,peptide,,rv217 founder virus gp41 peptide,IMMUNE SYSTEM,10/21/18,Crystal structure of VRC46.01 Fab in complex with gp41 peptide,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Kwon, Y.D., Druz, A., Law, W.H., Peng, D., Veradi, R., Doria-Rose, N.A., Kwong, P.D.",1.7,X-RAY DIFFRACTION,0.265,0.235,False,True,IGHV1,IGKV1,Kappa,,,,,,6mtt_H_L_P,False
1yqv,H,L,0,Y,protein,,hen egg white lysozyme,IMMUNE SYSTEM,02/02/05,The crystal structure of the antibody Fab HyHEL5 complex with lysozyme at 1.7A resolution,MUS MUSCULUS; GALLUS GALLUS,mus musculus,mus musculus,gallus gallus,"Cohen, G.H., Silverton, E.W., Padlan, E.A., Dyda, F., Wibbenmeyer, J.A., Wilson, R.C., Davies, D.R.",1.7,X-RAY DIFFRACTION,0.234,0.195,False,False,IGHV1,IGKV4,Kappa,,,,,,1yqv_H_L_Y,True
8vy4,A,B,0,C,peptide,,pca-asp-gly-asn-glu-glu-met,IMMUNE SYSTEM,07/24/24,Engineering a Tumor-Selective Prodrug T Cell Engager Bispecific Antibody for Safer Immunotherapy,Homo sapiens; Mus musculus,mus musculus,homo sapiens,homo sapiens,"Antonysamy, S., Demarest, S., Froning, K., Hickey, M.H., Kuhlman, B., McCue, A.C.",1.7,X-RAY DIFFRACTION,0.228,0.179,False,True,IGHV1,IGKV1,Kappa,,,,,,8vy4_A_B_C,False
7u0a,H,L,0,A,peptide,,sars-cov-2 s fusion peptide,VIRAL PROTEIN/IMMUNE SYSTEM,08/03/22,Crystal Structure of C77G12 Fab in complex with SARS-CoV-2 S fusion peptide,mammal environmental sample; SYNTHETIC CONSTRUCT,mammal environmental sample,mammal environmental sample,severe acute respiratory syndrome coronavirus2 ,"Tortorici, M.A., Veesler, D.",1.7,X-RAY DIFFRACTION,0.187,0.154,False,True,IGHV3,IGKV1,Kappa,,,,,,7u0a_H_L_A,False
5kve,H,L,0,E,protein,,zika envelope diii,VIRAL PROTEIN/IMMUNE SYSTEM,07/14/16,"Zika specific antibody, ZV-48, bound to ZIKA envelope DIII",ZIKA VIRUS; MUS MUSCULUS,mus musculus,mus musculus,zika virus,"Zhao, H., Nelson, C.A., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID)",1.7,X-RAY DIFFRACTION,0.213,0.187,False,False,IGHV1,IGKV8,Kappa,3.5e-08,-10.171711101540176,SPR,,TBD,5kve_H_L_E,False
5uea,H,L,0,D,protein,,histone chaperone asf1,IMMUNE SYSTEM,12/29/16,Structure of antigen-Fab complex with Histone chaperone ASF1,HOMO SAPIENS; SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / S288C),homo sapiens,homo sapiens,saccharomyces cerevisiae (strain atcc 204508 /s288c) ,"Bailey, L.J., Kossiakoff, A.A.",1.701,X-RAY DIFFRACTION,0.207,0.154,False,True,IGHV3,IGKV1,Kappa,,,,,,5uea_H_L_D,False
3wih,H,L,0,A,protein,,roundabout homolog 1,IMMUNE SYSTEM,09/12/13,Crystal structure of the third fibronectin domain (Fn3) of human ROBO1 in complex with the Fab fragment of murine monoclonal antibody B2212A.,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Nakayama, T., Mizohata, E., Yamashita, T., Nagatoishi, M., Iwanari, H., Mochizuki, Y., Kado, Y., Yokota, Y., Sato, R., Tsumoto, K., Fujitani, H., Kodama, T., Hamakubo, T., Inoue, T.",1.701,X-RAY DIFFRACTION,0.236,0.189,False,False,IGHV1,IGKV10,Kappa,1.9e-08,-10.533664762780312,ITC,,TBD,3wih_H_L_A,False
8og0,H,L,0,P,peptide,,alpha-synuclein,IMMUNE SYSTEM,03/27/24,Crystal structure of MJF14-6-4-2 Fab fragment in complex with epitope peptide,Oryctolagus cuniculus; SYNTHETIC CONSTRUCT,oryctolagus cuniculus,oryctolagus cuniculus,homo sapiens,"Tars, K., Lieknina, I.",1.712,X-RAY DIFFRACTION,0.231,0.195,False,True,IGHV1,IGKV1,Kappa,,,,,,8og0_H_L_P,False
7jmp,H,L,0,A,protein,,spike protein s1,Viral Protein/IMMUNE SYSTEM,08/02/20,Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody COVA2-39,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Wu, N.C., Yuan, M., Liu, H., Zhu, X., Wilson, I.A.",1.712,X-RAY DIFFRACTION,0.209,0.177,False,True,IGHV3,IGLV2,Lambda,,,,,,7jmp_H_L_A,False
7ucx,H,L,0,B,peptide,,cyclized cr1 peptide,TRANSPORT PROTEIN,01/18/23,LRP8 11H1 Fab complexed to a cyclized CR1 peptide,Homo sapiens; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,homo sapiens,"Argiriadi, M.A., Deng, K., Egan, D., Gao, L., Gizatullin, F., Harlan, J., Karaoglu, D., Qiu, W., Goodearl, A.",1.72,X-RAY DIFFRACTION,0.240,0.205,False,True,IGHV5,IGKV1,Kappa,,,,,,7ucx_H_L_B,False
2ih3,A,B,0,C,protein,,voltage-gated potassium channel,MEMBRANE PROTEIN,09/25/06,Ion selectivity in a semi-synthetic K+ channel locked in the conductive conformation,STREPTOMYCES LIVIDANS; MUS MUSCULUS,mus musculus,mus musculus,streptomyces lividans,"Valiyaveetil, F.I., Leonetti, M., Muir, T.W., MacKinnon, R.",1.72,X-RAY DIFFRACTION,0.242,0.233,False,False,IGHV1,IGKV5,Kappa,,,,,,2ih3_A_B_C,False
7kmh,A,B,0,C,protein,,spike protein s1,IMMUNE SYSTEM/VIRAL PROTEIN,11/02/20,LY-CoV488 neutralizing antibody against SARS-CoV-2,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Hendle, J., Pustilnik, A., Sauder, J.M., Boyles, J.S., Dickinson, C.D., Coleman, K.A.",1.72,X-RAY DIFFRACTION,0.242,0.194,False,True,IGHV3,IGKV1,Kappa,,,,,,7kmh_A_B_C,False
8ffe,H,L,0,A,protein,,low-density lipoprotein receptor-related protein 6,SIGNALING PROTEIN/Immune System,03/08/23,Crystal structure of LRP6 E1E2 domains bound to YW210.09 Fab and engineered XWnt8 peptide,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Jude, K.M., Tsutsumi, N., Waghray, D., Garcia, K.C.",1.72,X-RAY DIFFRACTION,0.231,0.185,False,True,IGHV3,IGKV1,Kappa,,,,,,8ffe_H_L_A,False
7kmi,A,B,0,C,protein,,spike protein s1,IMMUNE SYSTEM/VIRAL PROTEIN,11/02/20,LY-CoV481 neutralizing antibody against SARS-CoV-2,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Hendle, J., Pustilnik, A., Sauder, J.M., Coleman, K.A., Boyles, J.S., Dickinson, C.D.",1.73,X-RAY DIFFRACTION,0.217,0.186,False,True,IGHV3,IGKV1,Kappa,,,,,,7kmi_A_B_C,False
7raq,H,L,0,P,peptide,,spike stem helix peptide,IMMUNE SYSTEM,07/02/21,Crystal structure of CV3-25 Fab bound to SARS-CoV-2 spike stem helix peptide,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Hurlburt, N.K., Pancera, M.",1.74,X-RAY DIFFRACTION,0.203,0.181,False,True,IGHV5,IGKV1,Kappa,,,,,,7raq_H_L_P,False
9cqa,E,F,0,A,peptide,,mature secreted glycoprotein g,VIRAL PROTEIN/IMMUNE SYSTEM,02/19/25,Structure of antibody 1G1 bound to the central conserved region of RSV G,Homo sapiens; Respiratory syncytial virus A2,homo sapiens,homo sapiens,respiratory syncytial virus a2,"Juarez, M.G., DuBois, R.M.",1.74,X-RAY DIFFRACTION,0.225,0.211,False,True,IGHV1,IGLV3,Lambda,,,,,,9cqa_E_F_A,False
9mz8,B,A,0,D,peptide,,envelope glycoprotein 5768x-p27,IMMUNE SYSTEM/VIRAL PROTEIN,01/21/26,Crystal Structure of 19b Fab bound to the third variable (V3) loop peptide from the HIV-1 5768x-p27 envelope (Env) glycoprotein,Homo sapiens; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Fetics, S., Acharya, P.",1.74,X-RAY DIFFRACTION,0.226,0.190,False,True,IGHV3,IGKV1,Kappa,,,,,,9mz8_B_A_D,False
7u8c,H,L,0,2,peptide,,unknown,IMMUNE SYSTEM,03/08/22,Crystal structure of Mesothelin C-terminal peptide-MORAb 15B6 FAB complex,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,,"Zhan, J., Esser, L., Xia, D.",1.74,X-RAY DIFFRACTION,0.238,0.204,False,True,IGHV1,IGLV1,Lambda,,,,,,7u8c_H_L_2,False
9mid,H,L,0,C,protein,,eod-gt8 engineered mutant of gp120,IMMUNE SYSTEM,05/28/25,"Crystal structure of the VRC01-class antibody 3G08, derived from GT1.1 vaccination, in complex with eOD-GT8",Homo sapiens; Human immunodeficiency virus 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Agrawal, S., Wilson, I.A.",1.74,X-RAY DIFFRACTION,0.247,0.206,False,True,IGHV1,IGLV2,Lambda,,,,,,9mid_H_L_C,False
9dst,C,D,0,A,peptide,,circumsporozoite protein,IMMUNE SYSTEM,10/01/25,Crystal structure of Fab MS-1805 in complex with N-terminal junction peptide from circumsporozoite protein,Homo sapiens; Plasmodium falciparum 3D7,homo sapiens,homo sapiens,plasmodium falciparum 3d7,"Jain, M., Wilson, I.A.",1.74,X-RAY DIFFRACTION,0.228,0.197,False,True,IGHV3,IGKV1,Kappa,,,,,,9dst_C_D_A,False
6pec,H,L,0,A,peptide,,hiv-1 fusion peptide residue 512-519,IMMUNE SYSTEM,06/20/19,Vaccine-elicited NHP FP-targeting antibody DF2F-e.01 in complex with HIV fusion peptide (residue 512-519),MACACA MULATTA; SYNTHETIC CONSTRUCT,macaca mulatta,macaca mulatta,human immunodeficiency virus 1,"Xu, K., Liu, K., Wang, Y., Kwong, P.D.",1.746,X-RAY DIFFRACTION,0.215,0.194,False,True,IGHV4,IGKV1,Kappa,,,,,,6pec_H_L_A,False
4n0y,H,L,0,A,peptide,,hcv e1 peptide,IMMUNE SYSTEM,10/02/13,Structure of the Hepatitis C Envelope Glycoprotein E1 antigenic region 314-324 bound to the cross-neutralizing antibody IGH526,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,hepatitis c virus,"Kong, L., Wilson, I.A.",1.749,X-RAY DIFFRACTION,0.210,0.179,False,True,IGHV1,IGLV1,Lambda,,,,,,4n0y_H_L_A,False
5vkd,H,L,0,A,protein,,nucleoprotein,IMMUNE SYSTEM,04/21/17,Crystal structure of C-terminal domain of Ebola (Bundibugyo) nucleoprotein in complex with Fab fragment,BUNDIBUGYO EBOLAVIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,bundibugyo ebolavirus,"Radwanska, M.J., Derewenda, U., Kossiakoff, A., Derewenda, Z.S.",1.749,X-RAY DIFFRACTION,0.202,0.176,False,True,IGHV3,IGKV1,Kappa,,,,,,5vkd_H_L_A,False
5epm,A,B,0,C,peptide,,beta-theraphotoxin-cm1a,TOXIN/IMMUNE SYSTEM,11/11/15,Ceratotoxin variant in complex with specific antibody Fab fragment,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,ceratogyrus marshalli,"Strop, P., Shcherbatko, A., Rossi, A.",1.75,X-RAY DIFFRACTION,0.219,0.190,False,True,IGHV1,IGKV1,Kappa,,,,,,5epm_A_B_C,False
8dtt,E,F,0,J,peptide,,spike protein s2' stem helix peptide,IMMUNE SYSTEM,11/23/22,Crystal structure of SARS-CoV-2 spike stem helix peptide in complex with neutralizing antibody COV93-03,Homo sapiens; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Lee, C.C.D., Lin, T.H., Wilson, I.A.",1.75,X-RAY DIFFRACTION,0.225,0.195,False,True,IGHV1,IGKV3,Kappa,,,,,,8dtt_E_F_J,False
8gb6,H,L,0,A,protein,,spike protein s1,IMMUNE SYSTEM,05/24/23,Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody 21B6,Macaca mulatta; Severe acute respiratory syndrome coronavirus 2,macaca mulatta,macaca mulatta,severe acute respiratory syndrome coronavirus2 ,"Yuan, M., Wilson, I.A.",1.75,X-RAY DIFFRACTION,0.221,0.182,False,True,IGHV3,IGKV1,Kappa,,,,,,8gb6_H_L_A,False
7ue9,H,L,0,C,protein,,complement c3dg fragment,IMMUNE SYSTEM,03/21/22,Structure of anti-C3d Fab(3d8b) in complex with C3d,MUS MUSCULUS; HOMO SAPIENS,mus musculus,mus musculus,homo sapiens,"Olland, A.M., White, A., Suto, R.K.",1.75,X-RAY DIFFRACTION,0.201,0.171,False,True,IGHV1,IGKV2,Kappa,,,,,,7ue9_H_L_C,False
8jyq,A,B,0,C,peptide,,h2casmab-1 epitope peptide,IMMUNE SYSTEM,03/13/24,Crystal structure of cancer-specific anti-HER2 antibody H2Mab-214 in complex with epitope peptide,Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT,"mus musculus, homo sapiens","mus musculus, homo sapiens",homo sapiens,"Arimori, T., Takagi, J.",1.75,X-RAY DIFFRACTION,0.233,0.196,False,True,IGHV8,IGKV3,Kappa,,,,,,8jyq_A_B_C,False
8z3a,H,L,0,A,protein,,sonic hedgehog protein n-product,IMMUNE SYSTEM,04/16/25,Crystal structure of Sonic hedgehog in complex with antibody 5E1 without metals,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Caaveiro, J.M.M., Kaneda, I., Tsumoto, K.",1.75,X-RAY DIFFRACTION,0.207,0.175,False,True,IGHV1,IGKV6,Kappa,,,,,,8z3a_H_L_A,False
7bxv,H,L,0,A,peptide,,tyr-glu-val-his-his,IMMUNE SYSTEM,04/21/20,11A1 antibody-peptide complex,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Irie, K., Irie, Y., Kita, A., Miki, K.",1.75,X-RAY DIFFRACTION,0.194,0.166,False,False,IGHV9,IGKV1,Kappa,,,,,,7bxv_H_L_A,False
9j8a,H,L,0,P,peptide,,sulfated peptide from ccr5,IMMUNE SYSTEM,07/02/25,Structure of antibody BA8 in complex with sulfated peptide from CCR5,Oryctolagus cuniculus; SYNTHETIC CONSTRUCT,oryctolagus cuniculus,oryctolagus cuniculus,homo sapiens,"Caaveiro, J.M.M., Ujiie, K., Tsumoto, K.",1.75,X-RAY DIFFRACTION,0.206,0.165,False,True,IGHV1,IGKV1,Kappa,,,,,,9j8a_H_L_P,False
5f3b,E,F,0,D,protein,,growth/differentiation factor 8,Signaling Protein/Immune System,12/02/15,Structure of myostatin in complex with chimeric RK35 antibody,MUS MUSCULUS; HOMO SAPIENS,mus musculus,mus musculus,homo sapiens,"Parris, K.D., Mosyak, L.",1.76,X-RAY DIFFRACTION,0.206,0.179,False,True,IGHV5,IGKV6,Kappa,3e-12,-15.720019221239747,SPR,,TBD,5f3b_E_F_D,False
5u3o,H,L,0,A,peptide,,gp41 mper peptide,IMMUNE SYSTEM/VIRAL PROTEIN,12/02/16,Crystal Structure of DH511.2_K3 Fab in Complex with HIV-1 gp41 MPER Peptide,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Ofek, G., Wu, L., Lougheed, C.S., Williams, L.D., Nicely, N.I., Haynes, B.F.",1.761,X-RAY DIFFRACTION,0.192,0.161,False,True,IGHV3,IGKV1,Kappa,,,,,,5u3o_H_L_A,False
7rxp,H,L,0,A,protein,,circumsporozoite protein,IMMUNE SYSTEM,08/23/21,Fab1512 in complex with the C-terminal alpha-TSR domain of P. falciparum,HOMO SAPIENS; PLASMODIUM FALCIPARUM (ISOLATE 3D7),homo sapiens,homo sapiens,plasmodium falciparum (isolate 3d7),"Pholcharee, T., Oyen, D., Wilson, I.A.",1.761,X-RAY DIFFRACTION,0.205,0.177,False,True,IGHV3,IGKV2,Kappa,,,,,,7rxp_H_L_A,False
6bqb,H,L,0,P,peptide,,n-terminal junction peptide,IMMUNE SYSTEM,11/27/17,MGG4 Fab in complex with peptide,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,plasmodium falciparum,"Oyen, D., Tan, J., Lanzavecchia, A., Wilson, I.A.",1.769,X-RAY DIFFRACTION,0.196,0.166,False,True,IGHV3,IGKV4,Kappa,,,,,,6bqb_H_L_P,False
6ldy,H,L,0,M,peptide,,methylated peptide,IMMUNE SYSTEM,11/23/19,Structure antibody D6 in complex with methylated peptide,ORYCTOLAGUS CUNICULUS; SYNTHETIC CONSTRUCT,oryctolagus cuniculus,oryctolagus cuniculus,homo sapiens,"Caaveiro, J.M.M., Tsumoto, K.",1.77,X-RAY DIFFRACTION,0.218,0.185,False,True,IGHV1,IGKV1,Kappa,,,,,,6ldy_H_L_M,False
7neh,H,L,0,E,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,02/04/21,Crystal structure of the receptor binding domain of SARS-CoV-2 Spike glycoprotein in complex with COVOX-269 Fab,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, D., Ren, J., Stuart, D.",1.77,X-RAY DIFFRACTION,0.198,0.188,False,True,IGHV3,IGKV1,Kappa,,,,,,7neh_H_L_E,False
5u3d,B,A,0,E,protein,,protein l,IMMUNE SYSTEM,12/01/16,STRUCTURE OF MEDITOPE ENABLED TRASTUZUMAB I83E VARIANT,HOMO SAPIENS; FINEGOLDIA MAGNA; STAPHYLOCOCCUS AUREUS,homo sapiens,homo sapiens,finegoldia magna,"Bzymek, K.P., Avery, K.N., Zer, C., Williams, J.C.",1.77,X-RAY DIFFRACTION,0.185,0.157,False,True,IGHV3,IGKV1,Kappa,,,,,,5u3d_B_A_E,False
6kx1,A,B,0,C,peptide,,synthetic muc1 glycopepide,IMMUNE SYSTEM,09/09/19,Crystal structure of SN-101 mAb in complex with MUC1 glycopeptide,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Wakui, H., Tanaka, Y., Kato, K., Ose, T., Matsumoto, I., Min, Y., Tachibana, T., Nishimura, S.-I.",1.773,X-RAY DIFFRACTION,0.229,0.177,False,True,IGHV6,IGKV1,Kappa,,,,,,6kx1_A_B_C,False
6b5r,H,L,0,A,peptide,,pfcsp peptide 21asp-pro-asn ,IMMUNE SYSTEM,09/29/17,Structure of PfCSP peptide 21 with human antibody CIS42,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,plasmodium falciparum,"Pancera, M., Weidle, C.",1.775,X-RAY DIFFRACTION,0.237,0.191,False,True,IGHV7,IGLV2,Lambda,1.69e-09,-11.967303714867905,Unknown,,TBD,6b5r_H_L_A,False
1zea,H,L,0,A,peptide,,short synthetic d-amino acid peptide d2,IMMUNE SYSTEM,04/18/05,Structure of the anti-cholera toxin antibody Fab fragment TE33 in complex with a D-peptide,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,,"Scheerer, P., Krauss, N., Wessner, H., Scholz, C., Otte, L., Seifert, M., Kramer, A., Schneider-Mergener, J., Hoehne, W.",1.78,X-RAY DIFFRACTION,0.248,0.198,False,False,IGHV9,IGKV1,Kappa,6e-06,-7.123876292458442,Unknown,,TBD,1zea_H_L_A,False
7e9b,H,L,0,C,protein,,programmed cell death protein 1,IMMUNE SYSTEM,03/04/21,"Structural basis of HLX10 PD-1 receptor recognition, a promising anti-PD-1 antibody clinical candidate for cancer immunotherapy",HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Fan, S.L., Jiang, W.D.",1.78,X-RAY DIFFRACTION,0.210,0.170,False,True,IGHV3,IGKV1,Kappa,,,,,,7e9b_H_L_C,False
1mvu,B,A,0,P,peptide,,p-glycoprotein,immune system,09/26/02,SINGLE CHAIN FV OF C219 HEAVY CHAIN V101L MUTANT IN COMPLEX WITH SYNTHETIC EPITOPE PEPTIDE,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,,"Chan, D.C.M., Kuntz, D.A., Rose, D.R.",1.78,X-RAY DIFFRACTION,0.223,0.197,True,True,IGHV14,IGKV8,Kappa,,,,,,1mvu_B_A_P,False
5xku,C,B,0,A,protein,,influenza a virus,IMMUNE SYSTEM,05/09/17,Crystal structure of hemagglutinin globular head from an H7N9 influenza virus in complex with a neutralizing antibody HNIgGA6,INFLUENZA A VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus,"Chen, C., Wang, J., Wang, W., Gao, X., Cui, S., Jin, Q.",1.78,X-RAY DIFFRACTION,0.242,0.206,False,True,IGHV4,IGKV1,Kappa,,,,,,5xku_C_B_A,False
6p7h,A,B,0,C,peptide,,hiv fusion peptide residues (512-519),IMMUNE SYSTEM,06/10/20,Vaccine-elicited NHP FP-targeting neutralizing antibody DF2F-b.04 in complex with HIV fusion peptide (residue 512-519),PLATYRRHINI; SYNTHETIC CONSTRUCT,platyrrhini,platyrrhini,human immunodeficiency virus 1,"Xu, K., Liu, K., Wang, Y., Kwong, P.D.",1.782,X-RAY DIFFRACTION,0.230,0.201,False,True,IGHV4,IGKV2,Kappa,,,,,,6p7h_A_B_C,False
6vjt,H,L,0,P,peptide,,antigenic region 139-148 of hepatitis b surface antigenprotein ,ANTIVIRAL PROTEIN/IMMUNE SYSTEM,01/17/20,Co-crystals of broadly neutralizing antibody with the linear epitope from Hepatitis B surface antigen,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,hepatitis b virus,"Oren, D.A., Nussenzweig, M.C., Wang, Q.",1.782,X-RAY DIFFRACTION,0.227,0.182,False,True,IGHV3,IGKV1,Kappa,,,,,,6vjt_H_L_P,False
4xmp,H,L,0,G,protein,,"envelope glycoprotein gp160,envelope glycoprotein gp160,envelope glycoprotein gp160 ",IMMUNE SYSTEM,01/15/15,Crystal structure of broadly and potently neutralizing antibody VRC08 in complex with HIV-1 clade A strain Q842.d12 gp120,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Zhou, T., Srivatsan, S., Kwong, P.D.",1.7831,X-RAY DIFFRACTION,0.201,0.165,False,True,unknown,unknown,unknown,,,,,,4xmp_H_L_G,False
8sdf,B,C,0,A,protein,,spike protein s1,IMMUNE SYSTEM,03/13/24,Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody CC25.4,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Yuan, M., Wilson, I.A.",1.79,X-RAY DIFFRACTION,0.218,0.186,False,True,IGHV1,IGLV1,Lambda,,,,,,8sdf_B_C_A,False
3u2s,A,B,0,C,protein,,envelope glycoprotein gp120,IMMUNE SYSTEM,10/04/11,Crystal Structure of PG9 Fab in Complex with V1V2 Region from HIV-1 strain ZM109,HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"McLellan, J.S., Pancera, M., Kwong, P.D.",1.797,X-RAY DIFFRACTION,0.205,0.178,False,True,IGHV3,IGLV2,Lambda,,,,,,3u2s_A_B_C,False
7so5,H,L,0,A,protein,,toxin b,TOXIN/IMMUNE SYSTEM,10/29/21,Novel structural insights for a pair of monoclonal antibodies recognizing non-overlapping epitopes of the glucosyltransferase domain of Clostridium difficile toxin B,HOMO SAPIENS; CLOSTRIDIOIDES DIFFICILE R20291,homo sapiens,homo sapiens,clostridioides difficile r20291,"Liu, J.",1.797,X-RAY DIFFRACTION,0.223,0.185,False,True,IGHV4,IGKV2,Kappa,,,,,,7so5_H_L_A,False
4dgy,H,L,0,A,peptide,,e2 peptide,IMMUNE SYSTEM/VIRAL PROTEIN,01/27/12,"Structure of the Hepatitis C virus envelope glycoprotein E2 antigenic region 412-423 bound to the broadly neutralizing antibody HCV1, C2 form",HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,hepatitis c virus,"Kong, L., Wilson, I.A., Law, M.",1.798,X-RAY DIFFRACTION,0.221,0.188,False,True,IGHV3,IGKV3,Kappa,,,,,,4dgy_H_L_A,False
6dc8,H,L,0,P,peptide,,microtubule-associated protein tau,IMMUNE SYSTEM,05/04/18,Fab/epitope complex of mouse monoclonal antibody 8B2 targeting a non-phosphorylated tau epitope.,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Chukwu, J.E., Kong, X.-P.",1.799,X-RAY DIFFRACTION,0.219,0.179,False,False,IGHV1,IGKV1,Kappa,,,,,,6dc8_H_L_P,False
8vvl,H,L,0,A,protein,,gp38,VIRAL PROTEIN/IMMUNE SYSTEM,07/17/24,CCHFV GP38 bound to c13G8 Fab,Crimean-Congo hemorrhagic fever virus; Mus musculus,mus musculus,mus musculus,crimean-congo hemorrhagic fever virus,"Hjorth, C.K., Mishra, A.K., McLellan, J.S.",1.8,X-RAY DIFFRACTION,0.215,0.200,False,True,IGHV2,IGKV4,Kappa,,,,,,8vvl_H_L_A,False
4m1d,H,L,0,P,peptide,,cyclic v3 arch peptide,IMMUNE SYSTEM,08/02/13,Crystal structure of anti-HIV-1 Fab 447-52D in complex with V3 cyclic peptide MN,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,,"Killikelly, A., Kong, X.P.",1.8,X-RAY DIFFRACTION,0.216,0.186,False,True,IGHV3,IGLV1,Lambda,2.3e-08,-10.420467653019871,Unknown,,TBD,4m1d_H_L_P,False
6wzk,C,D,0,F,protein,,c-x-c motif chemokine 3,IMMUNE SYSTEM,05/14/20,LY3041658 Fab bound to CXCL3,HOMO SAPIENS; MACACA FASCICULARIS,homo sapiens,homo sapiens,macaca fascicularis,"Durbin, J.D., Druzina, Z.",1.8,X-RAY DIFFRACTION,0.209,0.178,False,True,IGHV1,IGKV3,Kappa,,,,,,6wzk_C_D_F,False
5hi4,C,D,0,B,protein,,interleukin-17a,IMMUNE SYSTEM/INHIBITOR,01/11/16,Binding site elucidation and structure guided design of macrocyclic IL-17A antagonists,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,homo sapiens,"Liu, S.",1.8,X-RAY DIFFRACTION,0.224,0.200,False,True,IGHV3,IGLV6,Lambda,,,,,,5hi4_C_D_B,False
4m62,I,M,0,T,protein,,t117,IMMUNE SYSTEM,08/08/13,Ontogeny of recognition specificity and functionality for the anti-HIV neutralizing antibody 4E10,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,synthetic construct,"Finton, K.A.K.",1.8,X-RAY DIFFRACTION,0.216,0.189,False,True,IGHV1,IGKV3,Kappa,2.57e-09,-11.718947964134085,SPR,,TBD,4m62_I_M_T,False
9pwn,H,L,0,A,peptide,,trem-2 stalk peptide,IMMUNE SYSTEM,09/10/25,Crystal structure of Fabs 7411 in complex with TREM2 peptide,Homo sapiens; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,homo sapiens,"Arndt, J.W., Chao, Q., Cooke, H.A., Almeida, A.D.S.",1.8,X-RAY DIFFRACTION,0.218,0.178,False,True,IGHV3,IGKV1,Kappa,,,,,,9pwn_H_L_A,False
8tmz,H,L,0,A,peptide,,stem helix peptide of spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,07/31/24,Crystal structure of MERS-CoV spike stem helix peptide in complex with neutralizing antibody CHM-27,Macaca mulatta; SYNTHETIC CONSTRUCT,macaca mulatta,macaca mulatta,middle east respiratory syndrome-relatedcoronavirus ,"Yuan, M., Wilson, I.A.",1.8,X-RAY DIFFRACTION,0.294,0.245,False,True,IGHV1,IGLV1,Lambda,,,,,,8tmz_H_L_A,False
3p0y,H,L,0,A,protein,,epidermal growth factor receptor,IMMUNE SYSTEM,09/29/10,anti-EGFR/HER3 Fab DL11 in complex with domain III of EGFR extracellular region,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Eigenbrot, C., Shia, S.",1.8,X-RAY DIFFRACTION,0.215,0.181,False,True,IGHV3,IGKV1,Kappa,1.92e-09,-12.36,SPR,37.0,22014573,3p0y_H_L_A,False
1i8k,B,A,0,C,peptide,,"epidermal growth factor receptor, egfrviiipeptide antigen ",IMMUNE SYSTEM,03/14/01,"CRYSTAL STRUCTURE OF DSFV MR1 IN COMPLEX WITH THE PEPTIDE ANTIGEN OF THE MUTANT EPIDERMAL GROWTH FACTOR RECEPTOR, EGFRVIII, AT LIQUID NITROGEN TEMPERATURE",MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,,"Landry, R.C., Klimowicz, A.C., Lavictoire, S.J., Borisova, S., Kottachchi, D.T., Lorimer, I.A., Evans, S.V.",1.8,X-RAY DIFFRACTION,0.224,0.172,False,True,IGHV5,IGKV17,Kappa,2.2e-08,-10.44,SPR,,11352579,1i8k_B_A_C,False
8fa7,H,L,0,P,peptide,,circumsporozoite protein kqpa peptide,IMMUNE SYSTEM,11/01/23,Crystal structure of Ky15.11 Fab in complex with circumsporozoite protein KQPA peptide,Mus musculus; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,plasmodium falciparum,"Thai, E., Julien, J.P.",1.8,X-RAY DIFFRACTION,0.198,0.171,False,True,IGHV3,IGKV1,Kappa,,,,,,8fa7_H_L_P,False
6o39,B,A,0,C,protein,,frizzled-5,SIGNALING PROTEIN,02/26/19,Crystal structure of Frizzled 5 CRD in complex with F2.I Fab,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Raman, S., Beilschmidt, M., Fransson, J., Julien, J.P.",1.8,X-RAY DIFFRACTION,0.234,0.196,False,True,IGHV3,IGKV1,Kappa,,,,,,6o39_B_A_C,False
6uoe,H,L,0,P,peptide,,envelope glycoprotein b,IMMUNE SYSTEM/VIRAL PROTEIN,10/14/19,3-25 Fab germline-reversion variant bound to an HCMV gB-derived peptide,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,human betaherpesvirus 5,"Wrapp, D., McLellan, J.S.",1.8,X-RAY DIFFRACTION,0.186,0.160,False,True,IGHV3,IGKV3,Kappa,,,,,,6uoe_H_L_P,False
1n0x,H,L,0,P,peptide,,b2.1 peptide,IMMUNE SYSTEM,10/15/02,Crystal Structure of a Broadly Neutralizing Anti-HIV-1 Antibody in Complex with a Peptide Mimotope,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,,"Saphire, E.O., Montero, M., Menendez, A., Irving, M.B., Zwick, M.B., Parren, P.W.H.I., Burton, D.R., Scott, J.K., Wilson, I.A.",1.8,X-RAY DIFFRACTION,0.252,0.220,False,True,IGHV1,IGKV3,Kappa,,,,,,1n0x_H_L_P,False
4ydl,H,L,0,G,protein,,"envelope glycoprotein gp160,envelope glycoprotein gp160",IMMUNE SYSTEM,02/22/15,Crystal structure of broadly and potently neutralizing antibody C38-VRC18.02 in complex with HIV-1 clade AE strain 93TH057gp120,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Zhou, T., Srivatsan, S., Kwong, P.D.",1.8,X-RAY DIFFRACTION,0.207,0.174,False,True,unknown,IGKV3,Kappa,,,,,,4ydl_H_L_G,False
8ahn,H,L,0,A,protein,,envelope polyprotein,VIRAL PROTEIN,05/24/23,Sin Nombre virus Gn in complex with Fab SNV-42,Homo sapiens; Sin Nombre orthohantavirus,homo sapiens,homo sapiens,sin nombre orthohantavirus,"Stass, R., Bowden, T.A.",1.8,X-RAY DIFFRACTION,0.221,0.190,False,True,IGHV3,IGLV1,Lambda,,,,,,8ahn_H_L_A,False
3mlr,H,L,0,P,peptide,,hiv-1 gp120 third variable region (v3) crown,IMMUNE SYSTEM,04/18/10,Crystal structure of anti-HIV-1 V3 Fab 2557 in complex with a NY5 V3 peptide,HUMAN IMMUNODEFICIENCY VIRUS TYPE 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus type 1,"Kong, X.-P.",1.8,X-RAY DIFFRACTION,0.216,0.181,False,False,IGHV5,IGLV3,Lambda,,,,,,3mlr_H_L_P,False
8v13,H,L,0,T,protein,,short neurotoxin 1,ANTITOXIN/IMMUNE SYSTEM,01/29/25,Crystal structure of Black mamba toxin in complex with Centi-SNX-B03 antibody,Dendraspis polylepis polylepis; Homo sapiens,homo sapiens,homo sapiens,dendraspis polylepis polylepis,"Pletnev, S., Glanville, J., Kwong, P.D.",1.8,X-RAY DIFFRACTION,0.229,0.181,False,True,IGHV3,IGLV3,Lambda,,,,,,8v13_H_L_T,False
8d9z,B,A,0,D,protein,,long neurotoxin 1,"IMMUNE SYSTEM,ANTITOXIN/TOXIN",06/14/23,Crystal structure of Cobra alpha-neurotoxin in complex with Centi-3FTX-D09 antibody,Homo sapiens; Naja nivea,homo sapiens,homo sapiens,naja nivea,"Pletnev, S., Verardi, R., Tully, E.S., Glanville, J., Kwong, P.D.",1.8,X-RAY DIFFRACTION,0.198,0.165,False,True,IGHV3,IGKV1,Kappa,,,,,,8d9z_B_A_D,False
2ypv,H,L,0,A,protein,,lipoprotein,IMMUNE SYSTEM,11/01/12,Crystal structure of the Meningococcal vaccine antigen factor H  binding protein in complex with a bactericidal antibody,NEISSERIA MENINGITIDIS MC58; MUS MUSCULUS,mus musculus,mus musculus,neisseria meningitidis mc58,"Malito, E., Veggi, D., Bottomley, M.J.",1.8,X-RAY DIFFRACTION,0.2246,0.1812,False,False,IGHV1,IGKV14,Kappa,3e-11,-14.355775131829494,SPR,,TBD,2ypv_H_L_A,False
1nby,B,A,0,C,protein,,lysozyme c,IMMUNE SYSTEM/HYDROLASE,12/04/02,Crystal Structure of HyHEL-63 complexed with HEL mutant K96A,MUS MUSCULUS; GALLUS GALLUS,mus musculus,mus musculus,gallus gallus,"Mariuzza, R.A., Li, Y., Urrutia, M., Smith-Gill, S.J.",1.8,X-RAY DIFFRACTION,0.250,0.216,False,True,IGHV3,IGKV5,Kappa,9.09e-05,,SPR,25.0,12515535,1nby_B_A_C,False
1pz5,B,A,0,C,peptide,,octapeptide (mdwnmhaa),IMMUNE SYSTEM,07/09/03,Structural basis of peptide-carbohydrate mimicry in an antibody combining site,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,,"Vyas, N.K., Vyas, M.N., Chervenak, M.C., Bundle, D.R., Pinto, B.M., Quiocho, F.A.",1.8,X-RAY DIFFRACTION,0.254,0.219,False,False,IGHV6,IGKV1,Kappa,4e-06,-7.8,ITC,25.0,14645714,1pz5_B_A_C,False
3fn0,H,L,0,P,peptide,,envelope polyprotein gp160,IMMUNE SYSTEM,12/22/08,Crystal structure of HIV-1 neutralizing human Fab Z13e1 in complex with a 12-residue peptide containing the Z13e1 epitope on gp41,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,,"Pejchal, R., Wilson, I.A., Zwick, M.B.",1.8,X-RAY DIFFRACTION,0.252,0.210,False,True,IGHV4,IGKV3D,Kappa,4e-05,-5.99986366241171,Unknown,,TBD,3fn0_H_L_P,False
9hv9,H,L,0,A,peptide,,capsid protein vp1,IMMUNE SYSTEM,01/14/26,Crystal structure of Fab34 complexed with a 7-mer peptide of FMDV VP1,Bos taurus; SYNTHETIC CONSTRUCT,bos taurus,bos taurus,foot-and-mouth disease virus,"Ren, J., Duyvesteyn, H.M.E., Stuart, D.I.",1.8,X-RAY DIFFRACTION,0.229,0.201,False,True,IGHV1,IGLV3,Lambda,,,,,,9hv9_H_L_A,False
4gag,H,L,0,P,peptide,,genome polyprotein,IMMUNE SYSTEM,07/25/12,Structure of the broadly neutralizing antibody AP33 in complex with its HCV epitope (E2 residues 412-423),MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,hepatitis c virus (isolate glasgow),"Potter, J.A., Owsianka, A., Angus, A.G.N., Jeffery, N., Matthews, D., Keck, Z., Lau, P., Foung, S.K.H., Taylor, G.L., Patel, A.H.",1.8,X-RAY DIFFRACTION,0.211,0.178,False,False,IGHV3,IGKV3,Kappa,,,,,,4gag_H_L_P,False
8g2m,H,L,0,F,peptide,,masking peptide,IMMUNE SYSTEM,02/14/24,The tumor activated anti-CTLA-4 monoclonal antibody XTX101 demonstrates tumor-growth inhibition and tumor-selective pharmacodynamics in mouse models of cancer,Mus musculus; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,peptide display vector fth1,"Williams, J.C., Williams, J.C.",1.8,X-RAY DIFFRACTION,0.214,0.180,False,True,IGHV1,IGKV6,Kappa,,,,,,8g2m_H_L_F,False
8fdc,A,B,0,P,peptide,,circumsporozoite protein kqpa peptide,IMMUNE SYSTEM,11/01/23,Crystal structure of Ky311 Fab in complex with circumsporozoite protein KQPA peptide,Mus musculus; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,plasmodium falciparum,"Burn Aschner, C., Julien, J.P.",1.8,X-RAY DIFFRACTION,0.234,0.199,False,True,IGHV3,IGKV3,Kappa,,,,,,8fdc_A_B_P,False
5csz,H,L,0,D,peptide,,amyloid beta a4 protein,IMMUNE SYSTEM,07/23/15,CRYSTAL STRUCTURE OF GANTENERUMAB FAB FRAGMENT IN COMPLEX WITH ABETA 1-11,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,homo sapiens,"Benz, J., Burger, D., Loetscher, H.R., Bohrmann, B.",1.8,X-RAY DIFFRACTION,0.230,0.196,False,True,IGHV3,IGKV3,Kappa,1.7e-08,-10.599564136380756,Unknown,,TBD,5csz_H_L_D,False
2zpk,H,L,0,P,peptide,,proteinase-activated receptor 4,IMMUNE SYSTEM,07/16/08,Crystal structure of P20.1 Fab fragment in complex with its antigen peptide,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,,"Nogi, T., Sanagawa, T., Takagi, J.",1.8,X-RAY DIFFRACTION,0.204,0.172,False,False,IGHV9,IGLV1,Lambda,1.47e-06,-7.95,SPR,25.0,18787202,2zpk_H_L_P,False
3liz,H,L,0,A,protein,,aspartic protease bla g 2,hydrolase/immune system,01/25/10,crystal structure of bla g 2 complexed with Fab 4C3,BLATTELLA GERMANICA; MUS MUSCULUS,mus musculus,mus musculus,blattella germanica,"Li, M., Gustchina, A., Glesner, J., Wunschmann, S., Pomes, A., Wlodawer, A.",1.8,X-RAY DIFFRACTION,0.202,0.177,False,False,IGHV5,IGKV14,Kappa,,,,,,3liz_H_L_A,False
6aod,B,A,0,C,protein,,coagulation factor xi,BLOOD CLOTTING/IMMUNE SYSTEM,08/15/17,FXIa antibody complex,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Lolicato, M., Minor, D.L.",1.8,X-RAY DIFFRACTION,0.207,0.182,False,True,IGHV1,IGKV1,Kappa,1.62e-10,-13.356611273870056,SPR,,TBD,6aod_B_A_C,False
7z0x,H,L,0,R,protein,,surface glycoprotein,ANTIVIRAL PROTEIN,02/23/22,THSC20.HVTR26 Fab bound to SARS-CoV-2 Receptor Binding Domain,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Wibmer, C.K.",1.8,X-RAY DIFFRACTION,0.188,0.163,False,True,IGHV3,IGLV2,Lambda,,,,,,7z0x_H_L_R,False
5tl5,H,L,0,A,protein,,cd27 antigen,IMMUNE SYSTEM,10/10/16,COMPLEX BETWEEN HUMAN CD27 AND ANTIBODY M2177,"MUS MUSCULUS, HOMO SAPIENS; HOMO SAPIENS","mus musculus, homo sapiens","mus musculus, homo sapiens",homo sapiens,"Teplyakov, A., Obmolova, G., Malia, T., Gilliland, G.L.",1.8,X-RAY DIFFRACTION,0.232,0.197,False,True,IGHV1,IGKV3,Kappa,,,,,,5tl5_H_L_A,False
9cr9,A,B,0,C,peptide,,circumsporozoite protein (npna)3 repeat region peptide,IMMUNE SYSTEM,07/09/25,Crystal structure of MA6 Fab in complex with PfCSP repeat region peptide NPNA3,Homo sapiens; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,plasmodium falciparum,"Rush, S.A., McLellan, J.S.",1.8,X-RAY DIFFRACTION,0.215,0.185,False,True,IGHV3,IGKV1,Kappa,,,,,,9cr9_A_B_C,False
9jcy,C,B,0,A,protein,,spike protein s1,ANTIVIRAL PROTEIN,07/30/25,Crystal structure of the HCoV-HKU1 RBD in complex with Fab,Homo sapiens; Human coronavirus HKU1 (isolate N1),homo sapiens,homo sapiens,human coronavirus hku1 (isolate n1),"Wang, H., Zhao, Z., Liu, X., Duan, Y., Yang, H.",1.8,X-RAY DIFFRACTION,0.203,0.173,False,True,IGHV4,IGKV1,Kappa,,,,,,9jcy_C_B_A,False
6o26,A,B,0,C,peptide,,circumsporozoite protein,IMMUNE SYSTEM,02/22/19,Crystal structure of 3246 Fab in complex with circumsporozoite protein NANA,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,plasmodium falciparum,"Scally, S.W., Bosch, A., Castro, K., Murugan, R., Wardemann, H., Julien, J.P.",1.8,X-RAY DIFFRACTION,0.207,0.163,False,True,IGHV3,IGKV3,Kappa,,,,,,6o26_A_B_C,False
4dtg,H,L,0,K,protein,,tissue factor pathway inhibitor,BLOOD CLOTTING INHIBITOR/IMMUNE SYSTEM,02/21/12,Hemostatic effect of a monoclonal antibody mAb 2021 blocking the interaction between FXa and TFPI in a rabbit hemophilia model,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Svensson, L.A., Breinholt, J., Krogh, B.O., Hilden, I.",1.8,X-RAY DIFFRACTION,0.236,0.196,False,True,IGHV3,IGKV2,Kappa,7.299999999999998e-11,-13.82890187434071,SPR,,TBD,4dtg_H_L_K,False
8acf,H,L,0,A,protein,,complement c2b fragment,IMMUNE SYSTEM,01/17/24,Structure of the argX-117 in complex with a complement C2 fragment at low pH,Homo sapiens; Lama glama,homo sapiens,homo sapiens,homo sapiens,"Olesen, H.G., Andersen, G.R.",1.8,X-RAY DIFFRACTION,0.199,0.178,False,True,IGHV1,IGKV3,Kappa,,,,,,8acf_H_L_A,False
1wej,H,L,0,F,protein,,cytochrome c,COMPLEX (ANTIBODY/ELECTRON TRANSPORT),03/26/98,IGG1 FAB FRAGMENT (OF E8 ANTIBODY) COMPLEXED WITH HORSE CYTOCHROME C AT 1.8 A RESOLUTION,MUS MUSCULUS; EQUUS CABALLUS,mus musculus,mus musculus,equus caballus,"Mylvaganam, S.E., Paterson, Y., Getzoff, E.D.",1.8,X-RAY DIFFRACTION,0.256,0.200,False,False,IGHV14,IGKV12,Kappa,1.58e-08,-10.63,ITC,25.0,7539913,1wej_H_L_F,False
3mnz,B,A,0,P,peptide,,gp41 mper-derived peptide,IMMUNE SYSTEM,04/22/10,Crystal structure of the non-neutralizing HIV antibody 13H11 Fab fragment with a gp41 MPER-derived peptide bearing Ala substitutions in a helical conformation,"MUS MUSCULUS,HOMO SAPIENS; SYNTHETIC CONSTRUCT","mus musculus,homo sapiens","mus musculus,homo sapiens",,"Nicely, N.I., Dennison, S.M., Kelsoe, G., Liao, H.-X., Alam, S.M., Haynes, B.F.",1.8,X-RAY DIFFRACTION,0.215,0.179,False,True,IGHV9,IGKV8,Kappa,,,,,,3mnz_B_A_P,False
6ldx,H,L,0,B,peptide,,gly-m3l-gly-gly-thr-tyr-pro,IMMUNE SYSTEM,11/23/19,Structure antibody E6 in complex with methylated peptide,ORYCTOLAGUS CUNICULUS; SYNTHETIC CONSTRUCT,oryctolagus cuniculus,oryctolagus cuniculus,homo sapiens,"Caaveiro, J.M.M., Tsumoto, K.",1.8,X-RAY DIFFRACTION,0.217,0.169,False,True,IGHV1,IGKV1,Kappa,,,,,,6ldx_H_L_B,False
6j5d,H,L,0,A,protein,,envelope,VIRAL PROTEIN/IMMUNE SYSTEM,01/10/19,Complex structure of MAb 4.2-scFv with louping ill virus envelope protein Domain III,LOUPING ILL VIRUS; MUS MUSCULUS,mus musculus,mus musculus,louping ill virus,"Yang, X., Qi, J., Peng, R., Dai, L., Gould, E.A., Tien, P., Gao, G.F.",1.8,X-RAY DIFFRACTION,0.189,0.170,False,True,IGHV1,IGKV12,Kappa,,,,,,6j5d_H_L_A,False
4rgo,H,L,0,S,protein,,enterotoxin type b,TOXIN/IMMUNE SYSTEM,09/30/14,Structure of Staphylococcal Enterotoxin B bound to the neutralizing antibody 14G8,STAPHYLOCOCCUS AUREUS; MUS MUSCULUS,mus musculus,mus musculus,staphylococcus aureus,"Franklin, M.C., Dutta, K., Varshney, A.K., Goger, M.J., Fries, B.C.",1.8,X-RAY DIFFRACTION,0.189,0.142,False,False,IGHV5,IGKV5,Kappa,7.900000000000001e-09,-11.053614350904786,BLI,,TBD,4rgo_H_L_S,False
7ssc,H,L,0,P,peptide,,envelope glycoprotein b peptide,IMMUNE SYSTEM/VIRAL PROTEIN,10/19/22,TRL345 lineage ancestor I8 Fab bound to an HCMV gB-derived peptide,Homo sapiens; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,human betaherpesvirus 5,"Sponholtz, M.R., McLellan, J.S.",1.8,X-RAY DIFFRACTION,0.174,0.150,False,True,IGHV3,IGKV3,Kappa,,,,,,7ssc_H_L_P,False
4okv,A,B,0,F,protein,,anti-platelet aggregation protein,BLOOD CLOTTING,01/23/14,Crystal structure of anopheline anti-platelet protein with Fab antibody,ANOPHELES STEPHENSI; MUS MUSCULUS,mus musculus,mus musculus,anopheles stephensi,"Park, S.Y., Sugiyama, K.",1.802,X-RAY DIFFRACTION,0.250,0.218,False,False,IGHV1,IGKV1,Kappa,,,,,,4okv_A_B_F,False
6mnq,H,L,0,P,peptide,,envelope glycoprotein,IMMUNE SYSTEM,10/02/18,Rhesus macaque anti-HIV V3 antibody DH727.2 with gp120 V3 ZAM18 peptide,MACACA MULATTA; SYNTHETIC CONSTRUCT,macaca mulatta,macaca mulatta,human immunodeficiency virus 1,"Nicely, N.I.",1.804,X-RAY DIFFRACTION,0.225,0.185,False,True,IGHV1,IGKV2,Kappa,,,,,,6mnq_H_L_P,False
4g6m,H,L,0,A,protein,,interleukin-1 beta,IMMUNE SYSTEM,07/19/12,Crystal strucure of human IL-1beta in complex with therapeutic antibody binding fragment of gevokizumab,,homo sapiens,homo sapiens,homo sapiens,"Blech, M., Hoerer, S.",1.81,X-RAY DIFFRACTION,0.226,0.202,False,True,IGHV4,IGKV1,Kappa,2.9e-10,-13.011617158513758,SPR,,TBD,4g6m_H_L_A,False
8f0l,A,B,0,Q,peptide,,t-cell surface glycoprotein cd3 epsilon chain,IMMUNE SYSTEM,03/29/23,Crystal Structure of the Human T cell Receptor CD3(EPSILON) N-Terminal Peptide Complexed with ADI-26906 FAB,Homo sapiens; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,homo sapiens,"Battles, M.B., Welin, M.",1.81,X-RAY DIFFRACTION,0.195,0.166,False,True,IGHV1,IGKV4,Kappa,,,,,,8f0l_A_B_Q,False
7q0g,A,B,0,E,protein,,spike protein s1,VIRAL PROTEIN,10/14/21,Crystal structure of the receptor binding domain of SARS-CoV-2 beta variant spike glycoprotein in complex with Beta-49 and FI-3A Fabs,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, D., Ren, J., Stuart, D.I.",1.82,X-RAY DIFFRACTION,0.224,0.192,False,True,IGHV1,IGKV3,Kappa,,,,,,7q0g_A_B_E,False
9c7f,A,B,0,G,peptide,,circumsporozoite protein,IMMUNE SYSTEM,12/25/24,Human monoclonal antibody MAD24-01 bound to the N-terminus of cleaved circumsporozoite protein,Homo sapiens; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,plasmodium falciparum 3d7,"Moskovitz, R., Wilson, I.A.",1.82,X-RAY DIFFRACTION,0.238,0.211,False,True,IGHV3,IGKV3,Kappa,,,,,,9c7f_A_B_G,False
7n3c,H,L,0,C,protein,,nucleoprotein,VIRAL PROTEIN,05/31/21,Crystal Structure of Human Fab S24-202 in the complex with the N-teminal Domain of Nucleocapsid protein from SARS CoV-2,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Kim, Y., Maltseva, N., Tesar, C., Jedrzejczak, R., Dugan, H., Stamper, C., Wilson, P., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)",1.82,X-RAY DIFFRACTION,0.210,0.179,False,True,IGHV5,IGKV3,Kappa,,,,,,7n3c_H_L_C,False
7q0g,H,L,0,E,protein,,spike protein s1,VIRAL PROTEIN,10/14/21,Crystal structure of the receptor binding domain of SARS-CoV-2 beta variant spike glycoprotein in complex with Beta-49 and FI-3A Fabs,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, D., Ren, J., Stuart, D.I.",1.82,X-RAY DIFFRACTION,0.224,0.192,False,True,IGHV3,IGKV1,Kappa,,,,,,7q0g_H_L_E,False
5en2,A,B,0,C,protein,,pre-glycoprotein polyprotein gp complex,VIRAL PROTEIN/IMMUNE SYSTEM,11/09/15,Molecular basis for antibody-mediated neutralization of New World hemorrhagic fever mammarenaviruses,JUNIN MAMMARENAVIRUS; MUS MUSCULUS,mus musculus,mus musculus,junin mammarenavirus,"Mahmutovic, S., Clark, L., Levis, S., Briggiler, A., Enria, D., Harrison, S.C., Abraham, J.",1.821,X-RAY DIFFRACTION,0.224,0.181,False,True,IGHV1,IGKV6,Kappa,,,,,,5en2_A_B_C,False
7rxl,C,D,0,F,protein,,circumsporozoite protein,IMMUNE SYSTEM,08/23/21,Fab1488 in complex with the C-terminal alpha-TSR domain of P. falciparum,HOMO SAPIENS; PLASMODIUM FALCIPARUM (ISOLATE 3D7),homo sapiens,homo sapiens,plasmodium falciparum (isolate 3d7),"Pholcharee, T., Oyen, D., Wilson, I.A.",1.823,X-RAY DIFFRACTION,0.255,0.207,False,True,IGHV3,IGLV3,Lambda,,,,,,7rxl_C_D_F,False
6aq7,H,L,0,A,protein,,major prion protein,IMMUNE SYSTEM,08/18/17,Structure of POM6 FAB fragment complexed with mouse PrPc,MUS MUSCULUS,mus musculus,mus musculus,mus musculus,"Baral, P.K., Swayampakula, M., James, M.N.G.",1.83,X-RAY DIFFRACTION,0.230,0.197,False,True,IGHV1,IGKV3,Kappa,,,,,,6aq7_H_L_A,False
5hdq,H,L,0,A,protein,,abc transporter substrate-binding protein,Transport protein/Immune System,01/05/16,MntC co-structure with mAB 305-78-7,STAPHYLOCOCCUS AUREUS; MUS MUSCULUS,mus musculus,mus musculus,staphylococcus aureus,"Parris, K., Mosyak, L.",1.83,X-RAY DIFFRACTION,0.236,0.207,False,True,IGHV1,IGKV8,Kappa,1.2e-09,-12.170174257779676,SPR,,TBD,5hdq_H_L_A,False
6nmt,B,A,0,C,protein,,tyrosine-protein phosphatase non-receptor type substrate 1,IMMUNE SYSTEM,01/11/19,Non-Blocking Fab 3 anti-SIRP-alpha antibody in complex with SIRP-alpha Variant 1,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Wibowo, A.S., Carter, J.J., Sim, J.",1.83,X-RAY DIFFRACTION,0.204,0.178,False,True,unknown,unknown,unknown,,,,,,6nmt_B_A_C,False
6yio,H,L,0,B,protein,,interleukin-2 receptor subunit alpha,IMMUNE SYSTEM,04/01/20,CRYSTAL STRUCTURE OF FAB RG6292 IN COMPLEX WITH CD25 ECD,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Benz, J., Koll, H., Leibrock, L.",1.83,X-RAY DIFFRACTION,0.231,0.203,False,True,IGHV1,IGKV1,Kappa,,,,,,6yio_H_L_B,False
7r6w,H,L,0,R,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,06/23/21,SARS-CoV-2 spike receptor-binding domain (RBD) in complex with S2X35 Fab and S309 Fab,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Snell, G., Czudnochowski, N., Hernandez, P., Nix, J.C., Croll, T.I., Corti, D., Cameroni, E., Pinto, D., Beltramello, M.",1.83,X-RAY DIFFRACTION,0.232,0.211,False,True,IGHV1,IGLV1,Lambda,,,,,,7r6w_H_L_R,False
9d41,H,L,0,A,protein,,borealin,IMMUNE SYSTEM,08/20/25,Crystal structure of N-terminal domain of Borealin (20-88) in complex with synthetic antibody fragment,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Filippova, E.V., Hou, J., Mukherjee, S., Kossiakoff, A.A.",1.84,X-RAY DIFFRACTION,0.197,0.155,False,True,IGHV3,IGKV1,Kappa,,,,,,9d41_H_L_A,False
9gox,H,L,0,A,protein,,adp-ribosyl cyclase/cyclic adp-ribose hydrolase 1,IMMUNE SYSTEM,02/12/25,Crystal structure of Fab B6-D9 in complex with CD38,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Dreyfus, C., Freier, R.",1.84,X-RAY DIFFRACTION,0.208,0.174,False,True,IGHV1,IGKV3,Kappa,,,,,,9gox_H_L_A,False
9ggp,H,L,0,A,protein,,alpha-1-antitrypsin,PROTEIN BINDING,05/14/25,Alpha-1-antitrypsin in complex with the Fab fragment of an anti-polymer antibody,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Lowen, S.M., Laffranchi, M., Lomas, D.A., Irving, J.A.",1.84,X-RAY DIFFRACTION,0.206,0.173,False,True,IGHV2,IGKV19,Kappa,,,,,,9ggp_H_L_A,False
6wfz,A,B,0,C,peptide,,npna3 peptide,IMMUNE SYSTEM,04/04/20,Crystal structure of Fab399 in complex with NPNA3 peptide from circumsporozoite protein,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,plasmodium falciparum,"Pholcharee, T., Oyen, D., Wilson, I.A.",1.84,X-RAY DIFFRACTION,0.225,0.186,False,True,IGHV3,IGKV2,Kappa,,,,,,6wfz_A_B_C,False
6kyz,E,F,0,D,protein,,genome polyprotein,VIRAL PROTEIN,05/27/20,HRV14 3C in complex with single chain antibody YDF,HUMAN RHINOVIRUS 14; HOMO SAPIENS,homo sapiens,homo sapiens,human rhinovirus 14,"Meng, B., Yang, B., Wilson, I.A.",1.845,X-RAY DIFFRACTION,0.208,0.175,False,True,IGHV3,IGLV3,Lambda,,,,,,6kyz_E_F_D,False
6d0x,A,B,0,C,peptide,,nanp3,IMMUNE SYSTEM,04/11/18,Crystal structure of chimeric H.2140 / K.1210 Fab in complex with circumsporozoite protein NANP3,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,plasmodium falciparum,"Scally, S.W., Bosch, A., Imkeller, K., Wardemann, H., Julien, J.P.",1.849,X-RAY DIFFRACTION,0.209,0.179,False,True,IGHV3,IGKV1,Kappa,,,,,,6d0x_A_B_C,False
1jps,H,L,0,T,protein,,tissue factor,IMMUNE SYSTEM,08/03/01,Crystal structure of tissue factor in complex with humanized Fab D3h44,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Faelber, K., Kirchhofer, D., Presta, L., Kelley, R.F., Muller, Y.A.",1.85,X-RAY DIFFRACTION,0.224,0.201,False,True,IGHV3,IGKV1,Kappa,1e-10,-13.63,SPR,25.0,11307801,1jps_H_L_T,False
5nuz,A,B,0,C,protein,,pre-glycoprotein polyprotein gp complex,IMMUNE SYSTEM,05/03/17,Junin virus GP1 glycoprotein in complex with an antibody Fab fragment,MUS MUSCULUS; JUNIN MAMMARENAVIRUS,mus musculus,mus musculus,junin mammarenavirus,"Zeltina, A., Krumm, S.A., Sahin, M., Struwe, W.B., Harlos, K., Nunberg, J.H., Crispin, M., Pinschewer, D.D., Doores, K.J., Bowden, T.A.",1.85,X-RAY DIFFRACTION,0.210,0.185,False,True,IGHV1,IGKV3,Kappa,,,,,,5nuz_A_B_C,False
9q8l,H,L,0,A,protein,,programmed cell death protein 1,IMMUNE SYSTEM,08/13/25,Crystal Structure of 21A08Ap1-Fab in Complex with Human PD-1 at 1.85 angstrom Resolution,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Murer, P., Petersen, L., Egli, N., Salazar, U., Neubert, P., Zurbach, A., Rau, A., Stocker, C., Katopodis, A., Huber, C., Carr, K., Arduin, A.",1.85,X-RAY DIFFRACTION,0.216,0.178,False,True,IGHV3,IGLV1,Lambda,,,,,,9q8l_H_L_A,False
9npi,C,B,0,A,protein,,major allergen can f 1,ALLERGEN/IMMUNE SYSTEM,08/27/25,X-ray crystal structure of recombinant Can f 1 in complex with human IgE 12F3 Fab,Canis lupus familiaris; Homo sapiens,homo sapiens,homo sapiens,canis lupus familiaris,"Khatri, K., Ball, A., Smith, S.A., Champan, M.D., Pomes, A., Chruszcz, M.",1.85,X-RAY DIFFRACTION,0.226,0.179,False,True,IGHV1,IGKV3,Kappa,,,,,,9npi_C_B_A,False
6uud,H,L,0,A,peptide,,circumsporozoite protein,IMMUNE SYSTEM,10/30/19,Crystal structure of antibody 5D5 in complex with PfCSP N-terminal peptide,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,plasmodium falciparum,"Thai, E., Scally, S.W., Julien, J.P.",1.85,X-RAY DIFFRACTION,0.224,0.178,False,True,IGHV1,IGKV6,Kappa,,,,,,6uud_H_L_A,False
8s6t,A,B,0,C,peptide,,mucin-1 subunit beta,IMMUNE SYSTEM,06/25/25,Crystal structure of Fab-3F1 complexed to a bis-STn glycopeptide,Mus musculus; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,synthetic construct,"Hurtado-Guerrero, R., Gines, I.",1.85,X-RAY DIFFRACTION,0.267,0.230,False,True,IGHV1,IGKV6,Kappa,,,,,,8s6t_A_B_C,False
8byu,H,L,0,A,protein,,adp-ribosyl cyclase/cyclic adp-ribose hydrolase 1,ANTITUMOR PROTEIN,07/12/23,Crystal Structure of HexaBody-CD38 Fab in complex with CD38,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Freier, R., Krapp, S., Hibbert, R.G.",1.85,X-RAY DIFFRACTION,0.230,0.188,False,True,IGHV1,IGKV1,Kappa,,,,,,8byu_H_L_A,False
5fcu,H,L,0,G,protein,,clade a/e 93th057 hiv-1 gp120 core,VIRAL PROTEIN/IMMUNE SYSTEM,12/15/15,CRYSTAL STRUCTURE OF THE INNER DOMAIN OF CLADE A/E HIV-1 GP120 IN COMPLEX WITH THE ADCC-POTENT RHESUS MACAQUE ANTIBODY JR4,MACACA MULATTA; HUMAN IMMUNODEFICIENCY VIRUS 1,macaca mulatta,macaca mulatta,human immunodeficiency virus 1,"Gohain, N., Tolbert, W.D., Pazgier, M.",1.85,X-RAY DIFFRACTION,0.223,0.184,False,True,IGHV4,IGLV1,Lambda,6.000000000000001e-09,-11.216608560689204,SPR,,TBD,5fcu_H_L_G,False
9cds,B,A,0,C,protein,,outer surface protein a,IMMUNE SYSTEM,09/24/25,Crystal structure of OspA ST1 from B. burgdorferi bound to monoclonal antibody LA-2,Borreliella burgdorferi B31; Mus musculus,mus musculus,mus musculus,borreliella burgdorferi b31,"Laciak, A.R., Lai, Y.-T., Dhingra, Y.",1.85,X-RAY DIFFRACTION,0.233,0.202,False,True,IGHV9,IGKV19,Kappa,,,,,,9cds_B_A_C,False
4o4y,H,L,0,A,peptide,,ides hinge peptide,IMMUNE SYSTEM,12/19/13,Crystal structure of the anti-hinge rabbit antibody 2095-2 in complex with IDES hinge peptide,"ORYCTOLAGUS CUNICULUS, HOMO SAPIENS; SYNTHETIC CONSTRUCT","oryctolagus cuniculus, homo sapiens","oryctolagus cuniculus, homo sapiens",homo sapiens,"Malia, T.J., Teplyakov, A., Luo, J., Gilliland, G.L.",1.85,X-RAY DIFFRACTION,0.237,0.192,False,True,IGHV1,IGKV1,Kappa,1.55e-08,-10.654293821025798,Unknown,,TBD,4o4y_H_L_A,False
8f9t,H,L,0,P,peptide,,circumsporozoite protein npdp peptide,IMMUNE SYSTEM,11/01/23,Crystal structure of Ky15.2 Fab in complex with circumsporozoite protein NPDP peptide,Mus musculus; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,plasmodium falciparum,"Thai, E., Julien, J.P.",1.85,X-RAY DIFFRACTION,0.216,0.172,False,True,IGHV3,IGKV1,Kappa,,,,,,8f9t_H_L_P,False
8uih,H,L,0,D,peptide,,3ptza peptide,IMMUNE SYSTEM,03/19/25,anti-Phosphohistidine Fab hSC44.ck.20 with 3pTza peptide,Oryctolagus cuniculus; SYNTHETIC CONSTRUCT,oryctolagus cuniculus,oryctolagus cuniculus,synthetic construct,"Kalagiri, R., Stanfield, R.L., Hunter, T., Wilson, I.A.",1.85,X-RAY DIFFRACTION,0.243,0.205,False,True,IGHV1,IGKV1,Kappa,,,,,,8uih_H_L_D,False
6nyq,H,L,0,C,protein,,glycosylated lysosomal membrane protein,IMMUNE SYSTEM,02/12/19,Crystal structure of glycosylated lysosomal membrane protein (GLMP) luminal domain bound to a Fab fragment,MUS MUSCULUS,mus musculus,mus musculus,mus musculus,"Huang, C.S., Boenig, G., Hymowitz, S.G.",1.85,X-RAY DIFFRACTION,0.204,0.164,False,True,IGHV1,IGKV12,Kappa,,,,,,6nyq_H_L_C,False
4h8w,H,L,0,G,protein,,hiv-1 clade a/e 93th057 (h375s) gp120,VIRAL PROTEIN/IMMUNE SYSTEM,09/24/12,Crystal structure of non-neutralizing and ADCC-potent antibody N5-i5 in complex with HIV-1 clade A/E gp120 and sCD4.,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Tolbert, W.D., Acharya, P., Kwong, P.D., Pazgier, M.",1.85,X-RAY DIFFRACTION,0.215,0.182,False,True,IGHV3,IGLV2,Lambda,,,,,,4h8w_H_L_G,False
7o33,H,L,0,P,peptide,,apsa epitope peptide,IMMUNE SYSTEM,04/01/21,Crystal structure of the anti-PAS Fab 3.1 in complex with its epitope peptide,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,synthetic construct,"Schilz, J., Skerra, A.",1.85,X-RAY DIFFRACTION,0.248,0.209,False,True,IGHV1,IGKV1,Kappa,,,,,,7o33_H_L_P,False
7mzi,H,L,0,A,protein,,spike protein s1,VIRAL PROTEIN,05/24/21,SARS-CoV-2 receptor binding domain bound to Fab WCSL 129,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Pymm, P., Tan, L.L., Dietrich, M.H., Chan, L.J., Tham, W.H.",1.85,X-RAY DIFFRACTION,0.208,0.174,False,True,IGHV3,IGLV1,Lambda,,,,,,7mzi_H_L_A,False
8f6l,A,B,0,C,protein,,b- and t-lymphocyte attenuator,IMMUNE SYSTEM,05/24/23,anti-BTLA monoclonal antibody h25F7 in complex with BTLA,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Hendle, J., Atwell, S., Lieu, R., Hickey, M., Weichert, K.",1.85,X-RAY DIFFRACTION,0.240,0.198,False,True,IGHV1,IGKV4,Kappa,,,,,,8f6l_A_B_C,False
6w00,H,L,0,P,peptide,,npna2 peptide,IMMUNE SYSTEM,02/28/20,Crystal structure of Fab239 in complex with NPNA2 peptide from circumsporozoite protein,STREPTOCOCCUS SP. GROUP G; HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,plasmodium falciparum,"Pholcharee, T., Oyen, D., Wilson, I.A.",1.853,X-RAY DIFFRACTION,0.206,0.187,False,True,IGHV3,IGKV1,Kappa,,,,,,6w00_H_L_P,False
7lfa,B,D,0,A,protein,,apolipoprotein l1,IMMUNE SYSTEM,01/15/21,Fab 3B6 bound to ApoL1 NTD,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Ultsch, M., Kirchhofer, D.",1.857,X-RAY DIFFRACTION,0.242,0.205,False,True,IGHV1,IGLV1,Lambda,,,,,,7lfa_B_D_A,False
5f9o,H,L,0,G,protein,,clade a/e 93th057 hiv-1 gp120 core,IMMUNE SYSTEM,12/10/15,Crystal structure of broadly neutralizing VH1-46 germline-derived CD4-binding site-directed antibody CH235.09 in complex with HIV-1 clade A/E 93TH057 gp120,HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Joyce, M.G., Mascola, J.R., Kwong, P.D.",1.86,X-RAY DIFFRACTION,0.221,0.204,False,True,unknown,IGKV3,Kappa,,,,,,5f9o_H_L_G,False
7skz,H,L,0,A,peptide,,pro-ser-lys-arg-ser-phe-ile-glu-asp-leu-leu-phe-asn,VIRAL PROTEIN/IMMUNE SYSTEM,07/20/22,Crystal Structure of VN01H1 Fab in complex with SARS-CoV-2 S fusion peptide,mammal environmental sample; SYNTHETIC CONSTRUCT,mammal environmental sample,mammal environmental sample,severe acute respiratory syndrome coronavirus2 ,"Tortorici, M.A., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)",1.86,X-RAY DIFFRACTION,0.234,0.199,False,True,IGHV3,IGKV3,Kappa,,,,,,7skz_H_L_A,False
7lsg,H,L,0,C,protein,,core protein,IMMUNE SYSTEM/VIRAL PROTEIN,02/18/21,Crystal structure of the human neutralizing antibody Fab fragment T025 bound to TBEV EDIII (Siberian Subtype),HOMO SAPIENS; TICK-BORNE ENCEPHALITIS VIRUS,homo sapiens,homo sapiens,tick-borne encephalitis virus,"Keeffe, J.R., Bjorkman, P.J.",1.86,X-RAY DIFFRACTION,0.212,0.187,False,True,IGHV3,IGKV3,Kappa,,,,,,7lsg_H_L_C,False
3idg,B,A,0,C,peptide,,gp41 mper peptide,IMMUNE SYSTEM,07/21/09,Crystal structure of the HIV-1 Cross Neutralizing Monoclonal Antibody 2F5 in complex with gp41 Peptide ALDKWD,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,,"Julien, J.P., Bryson, S., Pai, E.F.",1.86,X-RAY DIFFRACTION,0.227,0.224,False,False,IGHV2,IGKV1,Kappa,,,,,,3idg_B_A_C,False
9fik,B,C,0,A,protein,,neurotrophin-3,IMMUNE SYSTEM,04/02/25,Structure of the FAB fragment of the Antibody NTF30037 in complex with NTF3,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Gallego, P., Aagaard, A., Sjogren, T., Chin, S., Neal, F.",1.86,X-RAY DIFFRACTION,0.186,0.186,False,True,IGHV3,IGLV3,Lambda,,,,,,9fik_B_C_A,False
8qh0,H,L,0,A,protein,,spike protein s1,VIRAL PROTEIN,06/19/24,Crystal structure of the SARS-CoV-2 RBD with the antibody Cv2.3194,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Fernandez, I., Rey, F.A.",1.87,X-RAY DIFFRACTION,0.209,0.185,False,True,IGHV3,IGKV3,Kappa,,,,,,8qh0_H_L_A,False
8cwi,H,L,0,A,protein,,spike protein s1,IMMUNE SYSTEM,05/24/23,Fab arm of antibody 10G4 bound to CoV-2 receptor binding domain (RBD),Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Langley, D.B., Christ, D.",1.873,X-RAY DIFFRACTION,0.205,0.170,False,True,IGHV3,IGKV1,Kappa,,,,,,8cwi_H_L_A,False
8ds7,H,L,0,M,peptide,,acnliveghc peptide,ANTITUMOR PROTEIN,02/07/24,Tumor-activated antibody derivatives targeting CTLA4,Mus musculus; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,phage 13,"Johnson, P., Williams, J.",1.88,X-RAY DIFFRACTION,0.191,0.156,False,True,IGHV1,IGKV1,Kappa,,,,,,8ds7_H_L_M,False
7fgj,H,L,0,C,peptide,,vqilnk,IMMUNE SYSTEM,07/27/22,The cross-reaction complex structure with VQILNK peptide and the tau antibody's Fab domain.,Mus musculus; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Tsuchida, T., Tsuchiya, T., Miyamoto, K., In, Y., Minoura, K., Taniguchi, T., Ishida, T., Tomoo, K.",1.89,X-RAY DIFFRACTION,0.262,0.196,False,False,IGHV1,IGLV3,Lambda,,,,,,7fgj_H_L_C,False
8dgu,H,L,0,A,peptide,,spike protein s2',IMMUNE SYSTEM,01/25/23,Crystal structure of SARS-CoV-2 spike stem helix peptide in complex with Fab of broadly neutralizing antibody CC25.106 isolated from a vaccinated COVID-19 convalescent,Homo sapiens; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Liu, H., Wilson, I.A.",1.89,X-RAY DIFFRACTION,0.245,0.214,False,True,IGHV1,IGLV1,Lambda,,,,,,8dgu_H_L_A,False
3sge,J,I,0,M,peptide,,r13 peptide,IMMUNE SYSTEM,06/14/11,Crystal structure of mAb 17.2 in complex with R13 peptide,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,,"Pizarro, J.C., Boulot, G., Hontebeyrie, M., Bentley, G.A.",1.89,X-RAY DIFFRACTION,0.211,0.179,False,True,IGHV10,IGKV1,Kappa,,,,,,3sge_J_I_M,False
7zxu,H,L,0,E,protein,,spike protein s1,VIRAL PROTEIN,05/23/22,SARS-CoV-2 Omicron BA.4/5 RBD in complex with Beta-27 Fab and C1 nanobody,Homo sapiens; Lama glama; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Huo, J., Zhou, D., Ren, J., Stuart, D.I.",1.89,X-RAY DIFFRACTION,0.209,0.181,False,True,IGHV3,IGKV3,Kappa,,,,,,7zxu_H_L_E,False
3h0t,B,A,0,C,peptide,,hepcidin,IMMUNE SYSTEM/Antimicrobial Protein,04/10/09,Hepcidin-Fab complex,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Syed, R., Li, V.",1.89,X-RAY DIFFRACTION,0.251,0.202,False,True,IGHV6,IGLV6,Lambda,,,,,,3h0t_B_A_C,False
7fcq,H,L,0,A,protein,,spike protein s1,ANTIVIRAL PROTEIN,07/15/21,Crystallographic structure of neutralizing antibody P14-44 in complex with SARS-CoV-2 spike receptor-binding Domain (RBD),SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zheng, P., Jin, T.",1.89,X-RAY DIFFRACTION,0.201,0.165,False,True,IGHV1,IGLV2,Lambda,,,,,,7fcq_H_L_A,False
3go1,H,L,0,P,peptide,,envelope glycoprotein gp160,IMMUNE SYSTEM,03/18/09,Crystal structure of anti-HIV-1 Fab 268-D in complex with V3 peptide MN,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,,"Kong, X.P., Burke, V.J.",1.89,X-RAY DIFFRACTION,0.213,0.191,False,False,IGHV4,IGLV3,Lambda,,,,,,3go1_H_L_P,False
6pds,H,L,0,G,peptide,,hiv-1 fusion peptide residue 512-519,IMMUNE SYSTEM,06/19/19,Vaccine-elicited NHP FP-targeting antibody 0PV-a.04 in complex with HIV fusion peptide (residue 512-519),MACACA MULATTA; SYNTHETIC CONSTRUCT,macaca mulatta,macaca mulatta,human immunodeficiency virus 1,"Xu, K., Liu, K., Wang, Y., Kwong, P.D.",1.893,X-RAY DIFFRACTION,0.220,0.193,False,True,IGHV4,IGKV1,Kappa,,,,,,6pds_H_L_G,False
4zfo,A,B,0,F,peptide,,tumor necrosis factor receptor superfamily member 17,IMMUNE SYSTEM,04/21/15,J22.9-xi: chimeric mouse/human antibody against human BCMA (CD269),MUS MUSCULUS; HOMO SAPIENS,mus musculus,mus musculus,homo sapiens,"Marino, S.F., Daumke, O., Olal, D.",1.895,X-RAY DIFFRACTION,0.209,0.176,False,True,IGHV4,IGKV6,Kappa,2.1e-11,-14.567099215178107,Unknown,,TBD,4zfo_A_B_F,False
3se8,H,L,0,G,protein,,hiv-1 clade ae strain 93th057 gp120,VIRAL PROTEIN/IMMUNE SYSTEM,06/10/11,Crystal structure of broadly and potently neutralizing antibody VRC03 in complex with HIV-1 gp120,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Kwong, P.D., Zhou, T.",1.895,X-RAY DIFFRACTION,0.233,0.187,False,True,IGHV1,IGKV3,Kappa,,,,,,3se8_H_L_G,True
6uyd,H,L,0,E,protein,,envelope glycoprotein e2,VIRAL PROTEIN/IMMUNE SYSTEM,11/13/19,Structure of Hepatitis C Virus Envelope Glycoprotein E2mc3-v1 redesigned core from genotype 1a bound to broadly neutralizing antibody AR3C,HEPATITIS C VIRUS (ISOLATE H); HOMO SAPIENS,homo sapiens,homo sapiens,hepatitis c virus (isolate h),"Tzarum, N., Wilson, I.A., Zhu, J.",1.897,X-RAY DIFFRACTION,0.243,0.208,False,True,IGHV1,IGKV3,Kappa,,,,,,6uyd_H_L_E,False
7z2m,D,C,0,G,protein,,interleukin-17a,IMMUNE SYSTEM,02/08/23,Crystal Structure of the 11.003 Fab in complex with human IL-17A,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Rondeau, J.M., Lehmann, S.",1.899,X-RAY DIFFRACTION,0.227,0.201,False,True,IGHV5,IGKV3,Kappa,,,,,,7z2m_D_C_G,False
5w0d,B,C,0,A,protein,,hemagglutinin ha1,VIRAL PROTEIN/IMMUNE SYSTEM,05/30/17,Inferred precursor (UCA) of the human antibody lineage K03.12 in complex with influenza hemagglutinin H1 Solomon Islands/03/2006,INFLUENZA A VIRUS (A/SOLOMON ISLANDS/3/2006(H1N1)); HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus (a/solomonislands/3/2006(h1n1)) ,"McCarthy, K.R., Harrison, S.C.",1.899,X-RAY DIFFRACTION,0.234,0.196,False,True,IGHV1,IGLV2,Lambda,,,,,,5w0d_B_C_A,False
6sf6,A,B,0,D,peptide,,p6 epitope of cartilage oligomeric matrix protein (comp),IMMUNE SYSTEM,08/01/19,Crystal structure of the mAb 15A in complex with COMP-epitope P6,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,rattus norvegicus,"Dobritzsch, D., Ge, C., Holmdahl, R.",1.9,X-RAY DIFFRACTION,0.203,0.174,False,True,IGHV1,IGKV1,Kappa,,,,,,6sf6_A_B_D,False
5v6m,H,L,0,P,peptide,,envelope glycoprotein gp120 v3 peptide of con b sequence,VIRAL PROTEIN/IMMUNE SYSTEM,03/17/17,Crystal Structure of Rabbit Anti-HIV-1 gp120 V3 Fab 10A3 in complex with V3 peptide ConB,ORYCTOLAGUS CUNICULUS; SYNTHETIC CONSTRUCT,oryctolagus cuniculus,oryctolagus cuniculus,human immunodeficiency virus 1,"Pan, R., Kong, X.-P.",1.9,X-RAY DIFFRACTION,0.224,0.179,False,True,IGHV1,IGKV1,Kappa,,,,,,5v6m_H_L_P,False
5dtf,H,L,0,P,peptide,,peptide,IMMUNE SYSTEM,09/18/15,context-independent anti-hypusine antibody FabHpu98.61 in complex with hypusine,ORYCTOLAGUS CUNICULUS; SYNTHETIC CONSTRUCT,oryctolagus cuniculus,oryctolagus cuniculus,synthetic construct,"Zhai, Q., Carter, P.J.",1.9,X-RAY DIFFRACTION,0.254,0.212,False,True,IGHV1,IGKV1,Kappa,,,,,,5dtf_H_L_P,False
9mj1,F,G,0,C,protein,,glycoprotein g1,VIRAL PROTEIN,08/27/25,Native tagless Lassa virus spike complex bound at pH 8.0,Homo sapiens; Lassa virus Josiah,homo sapiens,homo sapiens,lassa virus josiah,"Katz, M., Cohen-Dvashi, H., Diskin, R.",1.9,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV3,Kappa,,,,,,9mj1_F_G_C,False
8t51,C,D,0,F,peptide,,triggering receptor expressed on myeloid cells 2 peptide,PEPTIDE BINDING PROTEIN,06/19/24,Crystal structure of Fab 3.10C2 bound to TREM2,Homo sapiens; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,homo sapiens,"Hsu, P.L., Wallweber, H.",1.9,X-RAY DIFFRACTION,0.240,0.193,False,True,IGHV3,IGKV2,Kappa,,,,,,8t51_C_D_F,False
8urf,H,L,0,A,protein,,asialoglycoprotein receptor 2,SUGAR BINDING PROTEIN,06/19/24,Crystal Structure of human ASGR2 CRD (Carbohydrate Recognition Domain) bound to 8G8 Fab,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Sampathumar, P., Li, Y.",1.9,X-RAY DIFFRACTION,0.204,0.166,False,True,IGHV1,IGKV12,Kappa,,,,,,8urf_H_L_A,False
8dfi,H,L,0,A,protein,,merozoite surface protein 1,STRUCTURAL PROTEIN/IMMUNE SYSTEM,10/12/22,Crystal structure of moderately neutralizing / interfering human monoclonal antibody 42C11 Fab in complex with MSP1-19,Homo sapiens; Plasmodium falciparum 3D7,homo sapiens,homo sapiens,plasmodium falciparum 3d7,"Patel, P.N., Tang, W.K., Tolia, N.H.",1.9,X-RAY DIFFRACTION,0.200,0.175,False,True,IGHV3,IGLV1,Lambda,,,,,,8dfi_H_L_A,False
2fd6,H,L,0,U,protein,,urokinase plasminogen activator surface receptor,"IMMUNE SYSTEM, HYDROLASE",12/13/05,Structure of Human Urokinase Plasminogen Activator in Complex with Urokinase Receptor and an anti-upar antibody at 1.9 A,HOMO SAPIENS; MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Huang, M., Huai, Q., Li, Y.",1.9,X-RAY DIFFRACTION,0.276,0.239,False,False,IGHV1,IGKV4,Kappa,,,,,,2fd6_H_L_U,False
1e4x,I,M,0,Q,peptide,,cyclic peptide,IMMUNE SYSTEM,07/12/00,crossreactive binding of a circularized peptide to an anti-TGFalpha antibody Fab-fragment,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,,"Hahn, M., Winkler, D., Misselwitz, R., Wessner, H., Welfle, K., Zahn, G., Schneider-Mergener, J., Hoehne, W.",1.9,X-RAY DIFFRACTION,0.311,0.245,False,False,IGHV1,IGKV10,Kappa,,,,,,1e4x_I_M_Q,False
2yc1,D,E,0,F,protein,,beta-mammal toxin cn2,IMMUNE SYSTEM/TOXIN,03/10/11,Crystal structure of the human derived single chain antibody fragment  (scFv) 9004G in complex with Cn2 toxin from the scorpion Centruroides  noxius Hoffmann,HOMO SAPIENS; CENTRUROIDES NOXIUS HOFFMANN,homo sapiens,homo sapiens,centruroides noxius hoffmann,"Canul-Tec, J.C., Riano-Umbarila, L., Rudino-Pinera, E., Becerril, B., Possani, L.D., Torres-Larios, A.",1.9,X-RAY DIFFRACTION,0.21212,0.18613,False,True,IGHV3,IGKV3,Kappa,,,,,,2yc1_D_E_F,False
8zr4,A,B,0,D,protein,,neuraminidase,VIRAL PROTEIN/IMMUNE SYSTEM,01/01/25,Cryo-EM structure of the N2-4N2C402 complex at a resolution of 1.9 angstrom,Homo sapiens; Influenza A virus,homo sapiens,homo sapiens,influenza a virus,"Chu, B.X., Wang, X., Yang, Q., Wu, X.D., Zhang, Z.L.",1.9,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV2,Kappa,,,,,,8zr4_A_B_D,False
5vag,C,B,0,A,protein,,hemagglutinin,IMMUNE SYSTEM,03/26/17,Crystal structure of H7-specific antibody m826 in complex with the HA1 domain of hemagglutinin from H7N9 influenza virus,INFLUENZA A VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus,"Song, H., Ying, T., Ji, X.",1.9,X-RAY DIFFRACTION,0.227,0.191,False,True,IGHV1,IGKV1,Kappa,9.4e-09,-10.950612882178412,SPR,,TBD,5vag_C_B_A,False
5wk3,S,R,0,B,protein,,c-c motif chemokine 17,IMMUNE SYSTEM,07/24/17,CRYSTAL STRUCTURE OF THE COMPLEX BETWEEN CCL17 AND M116 FAB,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Teplyakov, A., Obmolova, G., Gilliland, G.L.",1.9,X-RAY DIFFRACTION,0.231,0.180,False,True,IGHV5,IGKV4,Kappa,,,,,,5wk3_S_R_B,False
2vxq,H,L,0,A,protein,,pollen allergen phl p 2,ALLERGEN,07/08/08,Crystal structure of the major grass pollen allergen Phl p 2 in  complex with its specific IgE-Fab,PHLEUM PRATENSE; HOMO SAPIENS,homo sapiens,homo sapiens,phleum pratense,"Padavattan, S., Flicker, S., Schirmer, T., Madritsch, C., Randow, S., Reese, G., Vieths, S., Lupinek, C., Ebner, C., Rudolf, V., Markovic-Housley, Z.",1.9,X-RAY DIFFRACTION,0.226,0.177,False,True,IGHV4,IGKV1,Kappa,1.1e-10,-13.58,SPR,25.0,19201867,2vxq_H_L_A,False
8f5i,X,Y,0,A,protein,,specialized acyl carrier protein,IMMUNE SYSTEM,10/11/23,SARS-CoV-2 S2 helix epitope scaffold bound by antibody DH1057.1,Homo sapiens; Rhodopseudomonas palustris,homo sapiens,homo sapiens,rhodopseudomonas palustris,"Kapingidza, A.B., Wrapp, D., Winters, K., Azoitei, M.L.",1.9,X-RAY DIFFRACTION,0.245,0.211,False,True,IGHV1,IGKV3,Kappa,,,,,,8f5i_X_Y_A,False
8ekf,H,L,0,C,peptide,,unknown,IMMUNE SYSTEM,01/08/09,X-ray crystal structure of 311R Fab in complex with the PfCSP peptide NPNA-3,Homo sapiens; SYNTHETIC CONSTRUCT,,,,"Moskovitz, R., Wilson, I.A.",1.9,X-RAY DIFFRACTION,0.222,0.184,False,False,IGHV3,IGLV1,Lambda,,,,,,8ekf_H_L_C,False
5e8e,B,A,0,H,protein,,thrombin heavy chain,IMMUNE SYSTEM/HYDROLASE,10/14/15,Crystal structure of thrombin bound to an exosite 1-specific IgA Fab,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Baglin, T.P., Langdown, J., Frasson, R., Huntington, J.A.",1.9,X-RAY DIFFRACTION,0.244,0.201,False,False,IGHV1,IGKV3,Kappa,1.8e-09,-11.929942798416157,SPR,,TBD,5e8e_B_A_H,False
8ivx,H,L,0,A,protein,,anrp2-14,MEMBRANE PROTEIN,01/08/09,Crystal structure of NRP2 in complex with aNRP2-14 Fab fragment,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Geng, Y., Zhai, L.",1.9,X-RAY DIFFRACTION,0.225,0.191,False,True,IGHV2,IGKV6,Kappa,,,,,,8ivx_H_L_A,False
7t86,H,L,0,I,peptide,,phospho-sd peptide,TOXIN,01/11/23,Crystal Structure of Fab CR5133 / Phospho-SD Peptide Complex,,homo sapiens,homo sapiens,synthetic construct,"Luo, J., Malia, T.J., Buckley, P.T.",1.9,X-RAY DIFFRACTION,0.222,0.196,False,True,IGHV3,IGKV3,Kappa,,,,,,7t86_H_L_I,False
6glw,H,L,0,A,protein,,galectin-10,SUGAR BINDING PROTEIN,05/23/18,"Structure of galectin-10 in complex with the Fab fragment of a Charcot-Leyden crystal solubilizing antibody, 1D11",HOMO SAPIENS; LAMA GLAMA,lama glama,lama glama,homo sapiens,"Verstraete, K., Verschueren, K., Savvides, S.N.",1.9,X-RAY DIFFRACTION,0.211,0.167,False,True,IGHV3,IGLV2,Lambda,,,,,,6glw_H_L_A,False
9jd1,B,A,0,D,protein,,transmembrane protease serine 2 catalytic chain,ANTIVIRAL PROTEIN,07/30/25,Crystal structure of TMPRSS2 in complex with Fab,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Wang, H., Liu, X., Zhao, Z., Duan, Y., Yang, H.",1.9,X-RAY DIFFRACTION,0.223,0.190,False,True,IGHV3,IGLV6,Lambda,,,,,,9jd1_B_A_D,False
3cx5,J,K,0,E,protein,,"cytochrome b-c1 complex subunit rieske, mitochondrial",OXIDOREDUCTASE,04/23/08,Structure of complex III with bound cytochrome c in reduced state and definition of a minimal core interface for electron transfer.,MUS MUSCULUS; SACCHAROMYCES CEREVISIAE,mus musculus,mus musculus,saccharomyces cerevisiae,"Solmaz, S.R.N., Hunte, C.",1.9,X-RAY DIFFRACTION,0.263,0.245,False,True,IGHV3,IGKV10,Kappa,,,,,,3cx5_J_K_E,False
9uk5,H,L,0,A,protein,,interleukin 31,CYTOKINE/IMMUNE SYSTEM,10/29/25,crystal structure of the complex of interleukin-31 and its antibody,Canis lupus familiaris,canis lupus familiaris,canis lupus familiaris,canis lupus familiaris,"Guo, T., Gao, F., Xiao, H.",1.9,X-RAY DIFFRACTION,0.239,0.201,False,True,IGHV5,IGKV6,Kappa,,,,,,9uk5_H_L_A,False
6ddr,B,A,0,C,protein,,mhc class i polypeptide-related sequence a,IMMUNE SYSTEM,05/10/18,Crystal Structure Analysis of the Epitope of an Anti-MICA Antibody,MUS MUSCULUS; HOMO SAPIENS,mus musculus,mus musculus,homo sapiens,"Matsumoto, M.L.",1.9,X-RAY DIFFRACTION,0.247,0.208,False,True,IGHV1,IGKV12,Kappa,9.4e-10,-12.314856971588666,ITC,,TBD,6ddr_B_A_C,False
6b0g,D,C,0,E,protein,,25 kda ookinete surface antigen,IMMUNE SYSTEM,09/14/17,Crystal structure of Pfs25 in complex with the transmission blocking antibody 1245,HOMO SAPIENS; PLASMODIUM FALCIPARUM,homo sapiens,homo sapiens,plasmodium falciparum,"McLeod, B., Scally, S.W., Bosch, A., King, C.R., Julien, J.P.",1.9,X-RAY DIFFRACTION,0.200,0.164,False,True,IGHV1,IGKV2,Kappa,3.1e-08,-10.243615428706017,BLI,,TBD,6b0g_D_C_E,False
2adf,H,L,0,A,protein,,von willebrand factor,BLOOD CLOTTING/IMMUNE SYSTEM,07/20/05,"Crystal Structure and Paratope Determination of 82D6A3, an Antithrombotic Antibody Directed Against the von Willebrand factor A3-Domain",HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Staelens, S., Hadders, M.A., Vauterin, S., Platteau, C., Vanhoorelbeke, K., Huizinga, E.G., Deckmyn, H.",1.9,X-RAY DIFFRACTION,0.220,0.191,False,False,IGHV9,IGKV19,Kappa,,,,,,2adf_H_L_A,False
8v5q,H,L,0,G,protein,,envelope glycoprotein e,VIRAL PROTEIN,12/11/24,Varicella Zoster Virus (VZV) glycoprotein E (gE) gI binding domain in complex with human Fab 1E3,Homo sapiens; Human alphaherpesvirus 3,homo sapiens,homo sapiens,human alphaherpesvirus 3,"Holzapfel, G., Seraj, N., Harshbarger, W.",1.9,X-RAY DIFFRACTION,0.233,0.226,False,True,IGHV4,IGKV1,Kappa,,,,,,8v5q_H_L_G,False
2xwt,A,B,0,C,protein,,thyrotropin receptor,SIGNALING PROTEIN/IMMUNE SYSTEM,11/05/10,Crystal structure of the TSH receptor in complex with a blocking type  TSHR autoantibody,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Sanders, J., Sanders, P., Young, S., Kabelis, K., Baker, S., Sullivan, A., Evans, M., Clark, J., Wilmot, J., Hu, X., Roberts, E., Powell, M., Nunez Miguel, R., Furmaniak, J., Rees Smith, B.",1.9,X-RAY DIFFRACTION,0.22674,0.17691,False,True,IGHV5,IGLV1,Lambda,,,,,,2xwt_A_B_C,False
7s3n,H,L,0,A,peptide,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,09/07/21,SARS-CoV-2 S stem helix peptide bound to Fab22,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,severe acute respiratory syndrome coronavirus2 ,"Goldsmith, J.A., McLellan, J.S.",1.9,X-RAY DIFFRACTION,0.221,0.182,False,True,IGHV1,IGKV1,Kappa,,,,,,7s3n_H_L_A,False
4i77,H,L,0,Z,protein,,interleukin-13,IMMUNE SYSTEM/CYTOKINE,11/30/12,Lebrikizumab Fab bound to IL-13,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Eigenbrot, C., Ultsch, M.",1.9,X-RAY DIFFRACTION,0.219,0.179,False,True,IGHV2,IGKV3,Kappa,,,,,,4i77_H_L_Z,True
1ors,B,A,0,C,protein,,potassium channel,MEMBRANE PROTEIN,03/14/03,X-ray structure of the KvAP potassium channel voltage sensor in complex with an Fab,AEROPYRUM PERNIX; MUS MUSCULUS,mus musculus,mus musculus,aeropyrum pernix,"Jiang, Y., Lee, A., Chen, J., Ruta, V., Cadene, M., Chait, B.T., MacKinnon, R.",1.9,X-RAY DIFFRACTION,0.251,0.231,False,False,IGHV3,IGKV4,Kappa,,,,,,1ors_B_A_C,False
5vpl,D,C,0,A,protein,,der f 1 variant,HYDROLASE/IMMUNE SYSTEM,05/05/17,CRYSTAL STRUCTURE OF DER F 1 COMPLEXED WITH FAB 4C1,MUS MUSCULUS; DERMATOPHAGOIDES FARINAE,mus musculus,mus musculus,dermatophagoides farinae,"Chruszcz, M., Vailes, L.D., Chapman, M.D., Pomes, A., Minor, W.",1.9,X-RAY DIFFRACTION,0.194,0.152,False,True,IGHV3,IGKV14,Kappa,1.7e-08,-10.599564136380756,ITC,,TBD,5vpl_D_C_A,False
6ldv,H,L,0,P,peptide,,gly-m3l-gly-gly-thr-tyr-pro,IMMUNE SYSTEM,11/23/19,Structure antibody F9 in complex with methylated peptide,ORYCTOLAGUS CUNICULUS; SYNTHETIC CONSTRUCT,oryctolagus cuniculus,oryctolagus cuniculus,homo sapiens,"Caaveiro, J.M.M., Tsumoto, K.",1.9,X-RAY DIFFRACTION,0.229,0.179,False,True,IGHV1,IGKV1,Kappa,,,,,,6ldv_H_L_P,False
3qwo,H,L,0,P,protein,,motavizumab epitope scaffold,Immune System,02/28/11,Crystal structure of a motavizumab epitope-scaffold bound to motavizumab Fab,MUS MUSCULUS; STAPHYLOCOCCUS AUREUS,mus musculus,mus musculus,staphylococcus aureus,"McLellan, J.S., Kwong, P.D.",1.9,X-RAY DIFFRACTION,0.231,0.188,False,True,IGHV2,IGKV1,Kappa,8.7e-08,-9.63,SPR,,21549714,3qwo_H_L_P,False
8trs,A,G,0,D,protein,,ephrin type-a receptor 2,SIGNALING PROTEIN/IMMUNE SYSTEM,11/22/23,"Structure of the EphA2 CRD bound to FabS1CE_C1, trigonal form",Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Singer, A.U., Bruce, H.A., Blazer, L., Adams, J.J., Sicheri, F., Sidhu, S.S.",1.9,X-RAY DIFFRACTION,0.214,0.180,False,True,IGHV3,IGKV1,Kappa,,,,,,8trs_A_G_D,False
7rt9,C,D,0,Z,peptide,,peptide yy,HORMONE/IMMUNE SYSTEM,08/12/21,Crystal structures of human PYY and NPY,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,homo sapiens,"Langley, D.B., Christ, D.",1.9,X-RAY DIFFRACTION,0.213,0.179,False,True,IGHV3,IGKV1,Kappa,,,,,,7rt9_C_D_Z,False
2eiz,B,A,0,C,protein,,lysozyme c,IMMUNE SYSTEM/HYDROLASE,03/14/07,Crystal structure of humanized HYHEL-10 fv mutant(HW47Y)-hen lysozyme complex,HOMO SAPIENS; GALLUS GALLUS,homo sapiens,homo sapiens,gallus gallus,"Nakanishi, T., Tsumoto, K., Yokota, A., Kondo, H., Kumagai, I.",1.9,X-RAY DIFFRACTION,0.253,0.214,False,True,IGHV4,IGKV3,Kappa,,,,,,2eiz_B_A_C,False
4glr,J,K,0,B,peptide,,phospho-peptide,IMMUNE SYSTEM,08/14/12,Structure of the anti-ptau Fab (pT231/pS235_1) in complex with phosphoepitope pT231/pS235,GALLUS GALLUS; SYNTHETIC CONSTRUCT,gallus gallus,gallus gallus,homo sapiens,"Tu, C., Mosyak, L., Bard, J.",1.9,X-RAY DIFFRACTION,0.208,0.179,False,True,unknown,unknown,unknown,,,,,,4glr_J_K_B,False
9pru,B,A,0,W,protein,,low affinity immunoglobulin gamma fc region receptor iii-a,IMMUNE SYSTEM,12/31/25,Complex of the 3G8 Fab bound to Fc gamma receptor 3a / CD16a F158 allotype,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Barb, A.W., Lanzilotta, W.N., Kremer, P.G.",1.9,X-RAY DIFFRACTION,0.280,0.230,False,True,IGHV8,IGKV3,Kappa,,,,,,9pru_B_A_W,False
5fgc,E,B,0,A,peptide,,genome polyprotein,VIRAL PROTEIN,12/20/15,Three dimensional structure of broadly neutralizing human anti - Hepatitis C virus (HCV) glycoprotein E2 Fab fragment HC33.8,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,hepatitis c virus genotype 1a (isolate h),"Girard-Blanc, C., Rey, F.A., Krey, T.",1.9,X-RAY DIFFRACTION,0.236,0.194,False,True,IGHV3,IGLV3,Lambda,,,,,,5fgc_E_B_A,False
3rkd,H,L,0,A,protein,,capsid protein,VIRAL PROTEIN/IMMUNE SYSTEM,04/18/11,Hepatitis E Virus E2s domain (Genotype I) in complex with a neutralizing antibody,HEPATITIS E VIRUS; MUS MUSCULUS,mus musculus,mus musculus,hepatitis e virus,"Tang, X.H., Sivaraman, J.",1.9,X-RAY DIFFRACTION,0.217,0.189,False,False,IGHV8,IGKV12,Kappa,5.89e-09,-11.22,SPR,,21642534,3rkd_H_L_A,False
7zwi,E,F,0,D,protein,,gametocyte surface protein p45/48,CELL ADHESION,05/19/22,Pfs48/45 C-terminal domain bound to fab fragment of monoclonal antibody 32F3,Mus musculus; Plasmodium falciparum,mus musculus,mus musculus,plasmodium falciparum,"Ko, K.T., Lennartz, F.L., Higgins, M.K.",1.9,X-RAY DIFFRACTION,0.217,0.189,False,True,IGHV5,IGKV4,Kappa,,,,,,7zwi_E_F_D,False
9uzb,H,L,0,A,protein,,rna-directed rna polymerase l,HYDROLASE,12/31/25,Crystal structure of Kasokero virus cap-snatching endonuclease in apo form,Kasokero virus; Mus musculus,mus musculus,mus musculus,kasokero virus,"Deng, Z., Kuang, W., Tian, Z.",1.9,X-RAY DIFFRACTION,0.221,0.182,False,True,IGHV5,IGKV1,Kappa,,,,,,9uzb_H_L_A,False
8bse,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN,05/17/23,CRYSTAL STRUCTURE OF SARS-COV-2 RECEPTOR BINDING DOMAIN (RBD) in complex with 1D1 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Welin, M., Kimbung, Y.R., Focht, D., Pisitkun, T.",1.9,X-RAY DIFFRACTION,0.216,0.177,False,True,IGHV3,IGKV1,Kappa,,,,,,8bse_H_L_A,False
3d85,B,A,0,C,protein,,interleukin-23 subunit p19,IMMUNE SYSTEM/CYTOKINE,05/22/08,Crystal structure of IL-23 in complex with neutralizing FAB,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Beyer, B.M., Ingram, R., Ramanathan, L., Reichert, P., Le, H., Madison, V.",1.9,X-RAY DIFFRACTION,0.214,0.171,False,False,IGHV1,IGKV5,Kappa,,,,,,3d85_B_A_C,False
3l5x,H,L,0,A,protein,,interleukin-13,IMMUNE SYSTEM,12/22/09,Crystal structure of the complex between IL-13 and H2L6 FAB,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Teplyakov, A., Obmolova, G., Malia, T., Gilliland, G.L.",1.9,X-RAY DIFFRACTION,0.247,0.197,False,True,IGHV2,IGKV3,Kappa,2.69e-10,-13.05,SPR,25.0,20226193,3l5x_H_L_A,True
6zvf,H,L,0,P,peptide,,galectin-3,IMMUNE SYSTEM,07/24/20,Crystal structure of the recombinant Fab fragment derived from the hybridoma M3/38 in complex with a human Galectin-3 peptide,RATTUS NORVEGICUS; SYNTHETIC CONSTRUCT,rattus norvegicus,rattus norvegicus,homo sapiens,"Skerra, A., Eichinger, A.",1.9,X-RAY DIFFRACTION,0.243,0.203,False,True,IGHV9,IGKV1,Kappa,,,,,,6zvf_H_L_P,False
8f5n,H,L,0,A,protein,,t18.1 major pilin backbone protein t-antigen,STRUCTURAL PROTEIN,03/08/23,Identification of an Immunodominant region on a Group A Streptococcus T-antigen Reveals Temperature-Dependent Motion in Pili,Homo sapiens; Streptococcus pyogenes,homo sapiens,homo sapiens,streptococcus pyogenes,"Raynes, J.M., Young, P.G., Moreland, N.J.",1.9,X-RAY DIFFRACTION,0.244,0.202,False,True,IGHV1,IGKV10,Kappa,,,,,,8f5n_H_L_A,False
1ce1,H,L,0,P,peptide,,protein (peptide antigen),IMMUNE SYSTEM,03/12/99,1.9A STRUCTURE OF THE THERAPEUTIC ANTIBODY CAMPATH-1H FAB IN COMPLEX WITH A SYNTHETIC PEPTIDE ANTIGEN,HOMO SAPIENS; SYNTHETIC CONSTRUCT,,,,"James, L.C., Hale, G., Waldmann, H., Bloomer, A.C.",1.9,X-RAY DIFFRACTION,0.270,0.220,False,True,IGHV4,IGKV1,Kappa,,,,,,1ce1_H_L_P,False
4h88,H,L,0,A,protein,,major prion protein,IMMUNE SYSTEM,09/21/12,Structure of POM1 FAB fragment complexed with mouse PrPc Fragment 120-230,MUS MUSCULUS,mus musculus,mus musculus,mus musculus,"Baral, P.K., Wieland, B., Swayampakula, M., James, M.N.",1.9,X-RAY DIFFRACTION,0.234,0.199,False,False,IGHV1,IGKV5,Kappa,2.9e-09,-11.647373069103503,SPR,,TBD,4h88_H_L_A,False
7r58,H,L,0,A,protein,,platelet glycoprotein vi,BLOOD CLOTTING,11/16/22,Crystal structure of the GPVI-glenzocimab complex,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Jandrot-Perrus, M., Lebozec, K., Rose, N., Welin, M., Billiald, P.",1.902,X-RAY DIFFRACTION,0.232,0.186,False,True,IGHV1,IGKV1,Kappa,,,,,,7r58_H_L_A,False
6ubi,D,E,0,F,peptide,,hiv fusion peptide 512-519,IMMUNE SYSTEM/VIRAL PROTEIN,09/11/19,N123-VRC34.05 HIV neutralizing antibody in complex with HIV fusion peptide residue 512-519,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Xu, K., Liu, K., Kwong, P.D.",1.903,X-RAY DIFFRACTION,0.288,0.237,False,True,unknown,IGKV1,Kappa,,,,,,6ubi_D_E_F,False
6ct7,H,L,0,S,peptide,,ace-met-asp-val-phe-met-lys-gly-leu-ser-lys,IMMUNE SYSTEM,12/19/18,Fab of anti-a-synuclein antibody BIIB054 in complex with acetylated a-synuclein peptide (1-10),HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,homo sapiens,"Arndt, J.W.",1.903,X-RAY DIFFRACTION,0.223,0.180,False,True,IGHV3,IGLV3,Lambda,,,,,,6ct7_H_L_S,False
6was,H,L,0,J,protein,,1fd6 16055 v1v2 scaffold,IMMUNE SYSTEM,03/26/20,Structure of D19.PA8 Fab in complex with 1FD6 16055 V1V2 scaffold,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,homo sapiens,"Singh, S., Liban, T.J., Pancera, M.",1.904,X-RAY DIFFRACTION,0.228,0.194,False,True,IGHV3,IGLV6,Lambda,,,,,,6was_H_L_J,False
7ean,H,L,0,A,protein,,spike protein s1,VIRAL PROTEIN,03/07/21,immune complex of SARS-CoV-2 RBD and cross-neutralizing antibody 6D6,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; MUS MUSCULUS,mus musculus,mus musculus,severe acute respiratory syndrome coronavirus2 ,"Li, T.T., Gu, Y., Li, S.W.",1.91,X-RAY DIFFRACTION,0.224,0.191,False,False,IGHV14,IGKV6,Kappa,,,,,,7ean_H_L_A,False
1lk3,H,L,0,A,protein,,interleukin-10,IMMUNE SYSTEM,04/23/02,ENGINEERED HUMAN INTERLEUKIN-10 MONOMER COMPLEXED TO 9D7 FAB FRAGMENT,HOMO SAPIENS; RATTUS NORVEGICUS,rattus norvegicus,rattus norvegicus,homo sapiens,"Josephson, K., Jones, B.C., Walter, L.J., DiGiacomo, R., Indelicato, S.R., Walter, M.R.",1.91,X-RAY DIFFRACTION,0.240,0.187,False,False,IGHV1,IGKV3,Kappa,,,,,,1lk3_H_L_A,False
6gku,H,L,0,A,protein,,galectin-10,SUGAR BINDING PROTEIN,05/21/18,"Structure of galectin-10 in complex with the Fab fragment of a Charcot-Leyden crystal solubilizing antibody, 6F5",HOMO SAPIENS; LAMA GLAMA,lama glama,lama glama,homo sapiens,"Verstraete, K., Verschueren, K., Savvides, S.N.",1.91,X-RAY DIFFRACTION,0.201,0.166,False,True,IGHV3,IGLV2,Lambda,,,,,,6gku_H_L_A,False
7qu1,A,B,0,C,protein,,pre-glycoprotein polyprotein gp complex,IMMUNE SYSTEM,01/17/22,Machupo virus GP1 glycoprotein in complex with Fab fragment of antibody MAC1,MUS MUSCULUS; MACHUPO MAMMARENAVIRUS,mus musculus,mus musculus,machupo mammarenavirus,"Ng, W.M., Sahin, M., Krumm, S.A., Seow, J., Zeltina, A., Harlos, K., Paesen, G., Pinschewer, D.D., Doores, K.J., Bowden, T.A.",1.91,X-RAY DIFFRACTION,0.229,0.194,False,True,IGHV1,IGKV10,Kappa,,,,,,7qu1_A_B_C,False
6xm2,F,E,0,I,protein,,transforming growth factor beta-2,CYTOKINE/IMMUNE SYSTEM,06/29/20,The structure of the 4A11.v7 antibody in complex with human TGFb2,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Lupardus, P.J., Yin, J.P.",1.91,X-RAY DIFFRACTION,0.244,0.205,False,True,IGHV4,IGKV3,Kappa,,,,,,6xm2_F_E_I,False
7lfb,H,L,0,X,protein,,apolipoprotein l1,IMMUNE SYSTEM,01/16/21,Fab 7D6 bound to ApoL1 NTD,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Ultsch, M., Kirchhofer, D.",1.913,X-RAY DIFFRACTION,0.197,0.168,False,True,IGHV9,IGKV12,Kappa,,,,,,7lfb_H_L_X,False
4tsc,H,L,0,A,protein,,lysozyme c,Immune system/Hydrolase,06/18/14,Structure of a lysozyme antibody complex,HOMO SAPIENS; GALLUS GALLUS,homo sapiens,homo sapiens,gallus gallus,"Wensley, B.",1.92,X-RAY DIFFRACTION,0.232,0.209,False,True,IGHV3,IGLV1,Lambda,,,,,,4tsc_H_L_A,False
5w3p,H,L,0,P,peptide,,amyloid beta a4 protein,IMMUNE SYSTEM,06/08/17,ANTIBODY C706 IN COMPLEX WTH BETA-AMYLOID PEPTIDE 1-16,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Teplyakov, A., Obmolova, G., Gilliland, G.L.",1.92,X-RAY DIFFRACTION,0.236,0.198,False,True,IGHV1,IGKV4,Kappa,,,,,,5w3p_H_L_P,False
4lkx,A,B,0,R,peptide,,cemx segment,IMMUNE SYSTEM,07/09/13,Humanized antibody 4B12 Fab complexed with a CemX segment,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,homo sapiens,"Chu, H.M., Wright, J., Chan, Y.H., Lin, C.J., Chang, T.W., Lim, C.",1.92,X-RAY DIFFRACTION,0.229,0.180,False,True,IGHV4,IGKV1,Kappa,,,,,,4lkx_A_B_R,False
8ds5,C,B,0,A,protein,,cd27 antigen,IMMUNE SYSTEM,09/28/22,X-ray structure of the MK5890 Fab - CD27 antibody-antigen complex,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Fischmann, T.O.",1.926,X-RAY DIFFRACTION,0.225,0.209,False,True,IGHV9,IGKV3,Kappa,,,,,,8ds5_C_B_A,False
5gis,H,L,0,C,peptide,,thr-lys-pro-ile-thr-ile-gly-ser-his-ala-his-gly-asp-gln-tyr-lys ,IMMUNE SYSTEM,06/24/16,Crystal structure of a Fab fragment with its ligand peptide,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Kitago, Y., Kaneko, K.K., Ogasawara, S., Kato, Y., Takagi, J.",1.93,X-RAY DIFFRACTION,0.216,0.186,False,True,IGHV1,IGKV5,Kappa,,,,,,5gis_H_L_C,False
3tje,H,L,0,F,protein,,tumor necrosis factor receptor superfamily member 6,IMMUNE SYSTEM,08/24/11,Crystal structure of Fas receptor extracellular domain in complex with Fab E09,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Zuger, S., Stirnimann, C., Briand, C., Grutter, M.G.",1.93,X-RAY DIFFRACTION,0.232,0.204,False,True,IGHV4,IGLV1,Lambda,,,,,,3tje_H_L_F,False
9mif,H,L,0,C,protein,,eod-gt8 engineered mutant of gp120,IMMUNE SYSTEM,05/28/25,"Crystal structure of the VRC01-class antibody 9C09, derived from GT1.1 vaccination, in complex with eOD-GT8",Homo sapiens; Human immunodeficiency virus 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Agrawal, S., Wilson, I.A.",1.93,X-RAY DIFFRACTION,0.275,0.233,False,True,IGHV1,IGKV1,Kappa,,,,,,9mif_H_L_C,False
6o28,A,B,0,E,peptide,,circumsporozoite protein,IMMUNE SYSTEM,02/22/19,Crystal structure of 4493 Fab in complex with circumsporozoite protein KQPA and anti-kappa VHH domain,HOMO SAPIENS; LAMA GLAMA; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,plasmodium falciparum,"Scally, S.W., Bosch, A., Prieto, K., Murugan, R., Wardemann, H., Julien, J.P.",1.93,X-RAY DIFFRACTION,0.219,0.188,False,True,IGHV3,IGKV3,Kappa,,,,,,6o28_A_B_E,False
9gvn,E,F,0,A,protein,,interleukin-5,IMMUNE SYSTEM,01/14/26,DEPEMOKIMAB FAB IN COMPLEX WITH INTERLEUKIN 5,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Somers, D.O.",1.933,X-RAY DIFFRACTION,0.209,0.183,False,True,IGHV2,IGKV4,Kappa,,,,,,9gvn_E_F_A,False
7lm8,H,L,0,A,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,02/05/21,Crystal structure of SARS-CoV-2 spike protein receptor-binding domain in complex with two cross-neutralizing antibodies CV38-142 and COVA1-16 Fabs isolated from COVID-19 patients,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Liu, H., Wilson, I.A.",1.936,X-RAY DIFFRACTION,0.201,0.169,False,True,IGHV1,IGKV1,Kappa,,,,,,7lm8_H_L_A,False
6hf1,C,B,0,A,protein,,sulfhydryl oxidase 1,OXIDOREDUCTASE,08/21/18,Mutant oxidoreductase fragment of mouse QSOX1 in complex with an antibody Fab,MUS MUSCULUS,mus musculus,mus musculus,mus musculus,"Grossman-Haham, I., Fass, D.",1.94,X-RAY DIFFRACTION,0.231,0.194,False,True,IGHV1,IGKV4,Kappa,,,,,,6hf1_C_B_A,False
9oar,H,L,0,C,protein,,germline-targeting hiv-1 gp120 engineered outer domain eod-gt8-mingly ,IMMUNE SYSTEM,06/25/25,Crystal structure of antibody Fab G001-179 from IAVI G001 human trial in complex with a germline-targeting gp120 engineered outer domain eOD-GT8-mingly,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Lin, X., Wilson, I.A.",1.94,X-RAY DIFFRACTION,0.248,0.213,False,True,IGHV1,IGKV1,Kappa,,,,,,9oar_H_L_C,False
8x0y,E,F,0,B,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,06/05/24,Crystal structure of JM-1A in complex with SARS-CoV-2 RBD,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Mohapatra, A., Chen, X.",1.94,X-RAY DIFFRACTION,0.223,0.194,False,True,IGHV4,IGKV1,Kappa,,,,,,8x0y_E_F_B,False
7ps4,B,C,0,A,protein,,surface glycoprotein,VIRAL PROTEIN,09/22/21,Crystal structure of the receptor binding domain of SARS-CoV-2 beta variant spike glycoprotein in complex with Beta-38,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, D., Ren, J., Stuart, D.I.",1.94,X-RAY DIFFRACTION,0.231,0.204,False,True,IGHV5,IGLV1,Lambda,,,,,,7ps4_B_C_A,False
4p3c,H,L,0,M,peptide,,matrix metalloproteinase-14,IMMUNE SYSTEM,03/06/14,MT1-MMP:Fab complex (Form I),MUS MUSCULUS; HOMO SAPIENS,mus musculus,mus musculus,homo sapiens,"Rozenberg, H., Udi, Y., Sagi, I.",1.943,X-RAY DIFFRACTION,0.200,0.153,False,True,IGHV5,IGKV1,Kappa,,,,,,4p3c_H_L_M,False
7amr,H,L,0,B,protein,,human t-cell receptor beta chain trbc2,IMMUNE SYSTEM,10/09/20,Crystal structure of the complex of the KFN mutant of Jovi-1 Fab with human TRBC1,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Ferrari, M., Bulek, A., Bughda, R., Jha, R., Welin, M., Logan, D.T., Sewell, A., Onuoha, S., Pule, M.",1.949,X-RAY DIFFRACTION,0.225,0.179,False,True,IGHV1,IGKV1,Kappa,,,,,,7amr_H_L_B,False
6dkj,A,B,0,D,protein,,gastric inhibitory polypeptide receptor,SIGNALING PROTEIN,05/29/18,human GIPR ECD and Fab complex,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Min, X., Wang, Z.",1.95,X-RAY DIFFRACTION,0.238,0.199,False,True,IGHV3,IGKV3,Kappa,,,,,,6dkj_A_B_D,False
1sm3,H,L,0,P,peptide,,peptide epitope,COMPLEX (ANTIBODY/PEPTIDE EPITOPE),12/23/97,CRYSTAL STRUCTURE OF THE TUMOR SPECIFIC ANTIBODY SM3 COMPLEX WITH ITS PEPTIDE EPITOPE,MUS MUSCULUS,mus musculus,mus musculus,,"Dokurno, P., Bates, P.A., Band, H.A., Stewart, L.M.D., Lally, J.M., Burchell, J.M., Taylor-Papadimitriou, J., Sternberg, M.J.E., Snary, D., Freemont, P.S.",1.95,X-RAY DIFFRACTION,0.283,0.213,False,False,IGHV6,IGLV1,Lambda,2.4e-05,-6.30251950781888,Unknown,,TBD,1sm3_H_L_P,False
2brr,Y,X,0,P,peptide,,class 1 outer membrane protein variable region 2,IMMUNE SYSTEM,05/11/05,Complex of the neisserial PorA P1.4 epitope peptide and two Fab- fragments (antibody MN20B9.34),MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,neisseria meningitidis,"Oomen, C.J., Hoogerhout, P., Kuipers, B., Vidarsson, G., vanAlphen, L., Gros, P.",1.95,X-RAY DIFFRACTION,0.238,0.198,False,True,IGHV9,IGKV4,Kappa,,,,,,2brr_Y_X_P,False
7tp4,H,L,0,Z,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,01/24/22,Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody K398.22,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; MACACA MULATTA,macaca mulatta,macaca mulatta,severe acute respiratory syndrome coronavirus2 ,"Yuan, M., Zhu, X., Wilson, I.A.",1.95,X-RAY DIFFRACTION,0.231,0.205,False,True,IGHV3,IGLV2,Lambda,,,,,,7tp4_H_L_Z,False
5lqb,H,L,0,A,protein,,interleukin-2,CYTOKINE,08/16/16,"Complex structure of human IL2 mutant, Proleukin, with Fab fragment of NARA1 antibody",HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Zou, C., Wirth, E.",1.95,X-RAY DIFFRACTION,0.291,0.189,False,False,IGHV1,IGKV3,Kappa,,,,,,5lqb_H_L_A,False
6h0e,H,L,0,I,peptide,,microtubule-associated protein tau,IMMUNE SYSTEM,07/09/18,FAB dmCBTAU-22.1 IN COMPLEX WITH TAU PEPTIDE V1088-23,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,mus musculus,"Juraszek, J., Steinbacher, S.",1.95,X-RAY DIFFRACTION,0.285,0.222,False,True,IGHV1,IGKV2,Kappa,2.400000000000001e-07,-9.031007686639388,Unknown,,TBD,6h0e_H_L_I,False
3o41,A,B,0,C,peptide,,fusion glycoprotein f1,IMMUNE SYSTEM/VIRAL PROTEIN,07/26/10,Crystal Structure of 101F Fab Bound to 15-mer Peptide Epitope,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,human respiratory syncytial virus a,"McLellan, J.S., Chen, M., Chang, J.S., Yang, Y., Kim, A., Graham, B.S., Kwong, P.D.",1.95,X-RAY DIFFRACTION,0.217,0.177,False,True,IGHV8,IGKV3,Kappa,,,,,,3o41_A_B_C,False
7nx8,A,B,0,E,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,03/17/21,Crystal structure of the K417T mutant receptor binding domain of SARS-CoV-2 Spike glycoprotein in complex with COVOX-222 and EY6A Fabs,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, D., Ren, J., Stuart, D.",1.95,X-RAY DIFFRACTION,0.246,0.223,False,True,IGHV3,IGKV3,Kappa,,,,,,7nx8_A_B_E,False
6b0s,H,L,0,C,protein,,circumsporozoite protein,IMMUNE SYSTEM,09/15/17,Crystal structure of circumsporozoite protein aTSR domain in complex with 1710 antibody,HOMO SAPIENS; PLASMODIUM FALCIPARUM,homo sapiens,homo sapiens,plasmodium falciparum,"Scally, S.W., Murugan, R., Bosch, A., Triller, G., Wardemann, H., Julien, J.P.",1.95,X-RAY DIFFRACTION,0.224,0.180,False,True,IGHV3,IGLV3,Lambda,1.78e-07,-9.20807461785177,SPR,,TBD,6b0s_H_L_C,False
8b7h,H,L,0,A,protein,,gremlin-1,SIGNALING PROTEIN,12/27/23,Crystal structure of human Gremlin-1 in complex with Fab,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Schulze, M.-S., Martinez-Fleites, C.",1.95,X-RAY DIFFRACTION,0.275,0.265,False,True,IGHV1,IGKV4,Kappa,,,,,,8b7h_H_L_A,False
8ib1,B,A,0,C,peptide,,hemagglutinin ha2 chain,ANTIVIRAL PROTEIN,07/26/23,Structure of the LAH31 Fab bound to an influenza virus HA epitope peptide,Homo sapiens; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,influenza a virus,"Suzuki, T., Hashiguchi, T.",1.95,X-RAY DIFFRACTION,0.225,0.185,False,True,IGHV1,IGKV2,Kappa,,,,,,8ib1_B_A_C,False
3v6o,D,F,0,B,protein,,leptin receptor,IMMUNE SYSTEM,12/20/11,Leptin Receptor-antibody complex,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Carpenter, B., Hemsworth, G.R., Ross, R.J., Artymiuk, P.J.",1.95,X-RAY DIFFRACTION,0.213,0.171,False,False,IGHV2,IGKV6,Kappa,,,,,,3v6o_D_F_B,False
6z2l,C,B,0,A,protein,,surface protein p113,CELL INVASION,05/16/20,Structure of Plasmodium falciparum P113 bound to antibody P3.2,PLASMODIUM FALCIPARUM 3D7; MUS MUSCULUS,mus musculus,mus musculus,plasmodium falciparum 3d7,"Campeotto, I., Higgins, K.M.",1.95,X-RAY DIFFRACTION,0.226,0.205,False,True,IGHV1,IGKV10,Kappa,,,,,,6z2l_C_B_A,False
5eoq,H,L,0,A,peptide,,protein a27,VIRAL PROTEIN/IMMUNE SYSTEM,11/10/15,Structure of the murine Fab 1G6 bound to the vaccinia virus A27 peptide 31-40,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,vaccinia virus,"Matho, M.H., Zajonc, D.M.",1.95,X-RAY DIFFRACTION,0.235,0.197,False,False,IGHV8,IGKV1,Kappa,,,,,,5eoq_H_L_A,False
5bjz,C,L,0,A,protein,,maltose-binding periplasmic protein,SUGAR BINDING PROTEIN,09/12/17,Crystal structure of maltose binding protein in complex with an allosteric synthetic antibody,ESCHERICHIA COLI O157:H7; HOMO SAPIENS,homo sapiens,homo sapiens,escherichia coli o157,"Mukherjee, S., Kossiakoff, A.A.",1.95,X-RAY DIFFRACTION,0.229,0.194,False,True,IGHV3,IGKV1,Kappa,,,,,,5bjz_C_L_A,False
6x1w,H,L,0,A,peptide,,aclyana-3-ptza peptide,IMMUNE SYSTEM,05/19/20,Structure of pHis Fab (SC56-2) in complex with pHis mimetic peptide,ORYCTOLAGUS CUNICULUS; SYNTHETIC CONSTRUCT,oryctolagus cuniculus,oryctolagus cuniculus,synthetic construct,"Kalagiri, R., Stanfield, R., Wilson, I.A., Hunter, T.",1.95,X-RAY DIFFRACTION,0.241,0.200,False,True,IGHV1,IGKV1,Kappa,,,,,,6x1w_H_L_A,False
1osp,H,L,0,O,protein,,outer surface protein a,COMPLEX (IMMUNOGLOBULIN/LIPOPROTEIN),11/23/96,CRYSTAL STRUCTURE OF OUTER SURFACE PROTEIN A OF BORRELIA BURGDORFERI COMPLEXED WITH A MURINE MONOCLONAL ANTIBODY FAB,BORRELIA BURGDORFERI; MUS MUSCULUS,mus musculus,mus musculus,borrelia burgdorferi,"Li, H., Lawson, C.L.",1.95,X-RAY DIFFRACTION,0.295,0.229,False,False,IGHV3,IGKV13,Kappa,,,,,,1osp_H_L_O,False
8s6v,A,B,0,M,peptide,,mucin-1 subunit alpha,IMMUNE SYSTEM,06/25/25,Crystal structure of Fab-2D9 chimera complexed to a bis-Tn glycopeptide,Mus musculus; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Hurtado-Guerrero, R., Macias-Leon, J., Gonzalez-Ramirez, A.",1.95,X-RAY DIFFRACTION,0.244,0.199,False,True,IGHV1,IGKV8,Kappa,,,,,,8s6v_A_B_M,False
1qkz,H,L,0,P,peptide,,major outer membrane protein p1.16,IMMUNE SYSTEM,08/17/99,Fab fragment (MN14C11.6) in complex with a peptide antigen derived from Neisseria meningitidis P1.7 serosubtype antigen and domain II from Streptococcal protein G,STREPTOCOCCUS SP.; MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,neisseria meningitidis,"Derrick, J.P., Feavers, I., Maiden, M.C.J.",1.95,X-RAY DIFFRACTION,0.262,0.205,False,False,IGHV5,IGKV1,Kappa,,,,,,1qkz_H_L_P,False
8shw,C,A,0,B,peptide,,conglutin-7,IMMUNE SYSTEM,12/25/24,38B7 with hydroxy-proline peptide,Homo sapiens; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,arachis hypogaea,"Spiller, B.W., Shrem, R.A.",1.95,X-RAY DIFFRACTION,0.205,0.178,False,True,IGHV3,IGKV3,Kappa,,,,,,8shw_C_A_B,False
7nx8,H,L,0,E,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,03/17/21,Crystal structure of the K417T mutant receptor binding domain of SARS-CoV-2 Spike glycoprotein in complex with COVOX-222 and EY6A Fabs,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, D., Ren, J., Stuart, D.",1.95,X-RAY DIFFRACTION,0.246,0.223,False,True,IGHV3,IGKV1,Kappa,,,,,,7nx8_H_L_E,False
6pdu,H,L,0,C,peptide,,hiv-1 fusion peptide residue 512-519,IMMUNE SYSTEM,06/19/19,Vaccine-elicited NHP FP-targeting antibody 13N024-a.01 in complex with HIV fusion peptide (residue 512-519),HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Xu, K., Liu, K., Wang, Y., Kwong, P.D.",1.953,X-RAY DIFFRACTION,0.211,0.173,False,True,IGHV3,IGKV2,Kappa,,,,,,6pdu_H_L_C,False
8fba,A,B,0,P,peptide,,circumsporozoite protein dnd peptide,IMMUNE SYSTEM,11/01/23,Crystal structure of Ky315 Fab in complex with circumsporozoite protein DND peptide,Mus musculus; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,plasmodium falciparum,"Burn Aschner, C., Julien, J.P.",1.96,X-RAY DIFFRACTION,0.220,0.178,False,True,IGHV3,IGKV3,Kappa,,,,,,8fba_A_B_P,False
9z3b,H,G,0,L,peptide,,mesothelin,ANTITUMOR PROTEIN/IMMUNE SYSTEM,01/21/26,Structure C-terminal human Mesothelin Peptide bound to MSLNB703 Fab,Homo sapiens; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,homo sapiens,"Shaffer, P.L., Ember, S.",1.96,X-RAY DIFFRACTION,0.278,0.227,False,True,IGHV6,IGKV4,Kappa,,,,,,9z3b_H_G_L,False
9rm2,M,N,0,O,protein,,major capsid protein vp1,VIRAL PROTEIN,07/09/25,BKPyV VP1 IN COMPLEX WITH 319C07-FAB,Betapolyomavirus hominis; Homo sapiens,homo sapiens,homo sapiens,betapolyomavirus hominis,"Schmitt, S., Hillenbrand, M.",1.96,X-RAY DIFFRACTION,0.218,0.187,False,True,IGHV4,IGKV3,Kappa,,,,,,9rm2_M_N_O,False
7mdp,H,I,0,A,protein,,isoform 2b of gtpase kras,HYDROLASE/Immune System,04/05/21,KRas G12C in complex with G-2897,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Oh, A., Frank, Y., Wang, W.",1.96,X-RAY DIFFRACTION,0.229,0.195,False,True,IGHV4,IGLV1,Lambda,,,,,,7mdp_H_I_A,False
9blx,H,L,0,G,peptide,,envelope glycoprotein gp160,IMMUNE SYSTEM/Viral Protein,01/15/25,Rhesus macaque ITS111.01 Fab in complex with SIV MPER peptide,Macaca mulatta; SYNTHETIC CONSTRUCT,macaca mulatta,macaca mulatta,simian immunodeficiency virus,"Gorman, J., Ahmadi, M., Kwong, P.D.",1.96,X-RAY DIFFRACTION,0.204,0.178,False,True,IGHV4,IGKV1,Kappa,,,,,,9blx_H_L_G,False
5n7w,H,L,0,X,protein,,interleukin-17a,IMMUNE SYSTEM,02/21/17,Computationally designed functional antibody,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Hargreaves, D., Breed, J.",1.96,X-RAY DIFFRACTION,0.250,0.199,False,True,IGHV1,IGKV1,Kappa,8e-08,-9.681917538322692,SPR,,TBD,5n7w_H_L_X,False
9c7x,A,B,0,C,peptide,,spike protein s2',IMMUNE SYSTEM,06/18/25,Crystal structure of SARS-CoV-2 antibody 1H06 in complex with a HR2 peptide,Mus musculus; Severe acute respiratory syndrome coronavirus 2,mus musculus,mus musculus,severe acute respiratory syndrome coronavirus2 ,"Van Wazer, D.J., Zhou, T., Kwong, P.D.",1.96,X-RAY DIFFRACTION,0.215,0.172,False,True,IGHV1,IGKV1,Kappa,,,,,,9c7x_A_B_C,False
5ig7,G,H,0,I,peptide,,peptide pro-leu-gln-pro-gln-gln-pro-phe-pro,IMMUNE SYSTEM,02/27/16,Crystal structure of anti-gliadin 1002-1E01 Fab fragment in complex of peptide PLQPQQPFP,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,homo sapiens,"Chen, X., Zhao, Y., Harlos, K., Snir, O., Sollid, L.M.",1.97,X-RAY DIFFRACTION,0.236,0.190,False,True,IGHV3,IGLV4,Lambda,,,,,,5ig7_G_H_I,False
5umn,E,F,0,A,protein,,hemagglutinin,IMMUNE SYSTEM,01/27/17,"Crystal structure of C05 VPGSGW mutant bound to H3 influenza hemagglutinin, HA1 subunit",INFLUENZA A VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus,"Wu, N.C., Wilson, I.A.",1.97,X-RAY DIFFRACTION,0.208,0.181,False,True,IGHV3,IGKV1,Kappa,,,,,,5umn_E_F_A,False
9mic,H,L,0,C,protein,,eod-gt8 engineered mutant of gp120,IMMUNE SYSTEM,05/28/25,"Crystal structure of the VRC01-class antibody 4D01, derived from GT1.1 vaccination, in complex with eOD-GT8",Homo sapiens; Human immunodeficiency virus 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Agrawal, S., Wilson, I.A.",1.97,X-RAY DIFFRACTION,0.252,0.222,False,True,IGHV1,IGKV1,Kappa,,,,,,9mic_H_L_C,False
7rlx,A,B,0,P,peptide,,peptide from circumsporozoite protein variant vk210,ANTIMICROBIAL PROTEIN,07/26/21,Antibody 2F2 in complex with P. vivax CSP peptide GDRADGQPAGDRAAGQPA,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,plasmodium vivax,"Kucharska, I., Julien, J.P.",1.97,X-RAY DIFFRACTION,0.235,0.186,False,True,IGHV1,IGKV1,Kappa,,,,,,7rlx_A_B_P,False
5t6p,B,A,0,F,peptide,,muc1 peptide fragment,IMMUNE SYSTEM,09/01/16,Crystal structure of therapeutic mAB AR20.5 in complex with MUC1 peptide,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Brooks, C.L., Movahedin, M.",1.97,X-RAY DIFFRACTION,0.232,0.221,False,True,IGHV5,IGKV1,Kappa,8.8e-07,-8.26120372284051,Unknown,,TBD,5t6p_B_A_F,False
6db6,H,L,0,P,peptide,,hiv-1 gp120 v3 peptide from mn strain,IMMUNE SYSTEM,05/02/18,Crystal structure of anti-HIV-1 V3 Fab 311-11D in complex with a HIV-1 gp120 V3 peptide from MN strain,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Chan, K.-W., Kong, X.-P.",1.978,X-RAY DIFFRACTION,0.216,0.174,False,True,IGHV1,IGLV3,Lambda,,,,,,6db6_H_L_P,False
6o3l,A,B,0,E,peptide,,"mper peptide, region 671-683 of hiv-1 gp41",IMMUNE SYSTEM,02/26/19,Crystal structure of the Fab fragment of the human HIV-1 neutralizing antibody PGZL1.H4K3 in complex with its MPER peptide epitope (region 671-683 of HIV-1 gp41).,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Irimia, A., Wilson, I.A.",1.98,X-RAY DIFFRACTION,0.211,0.170,False,True,IGHV1,IGKV3,Kappa,,,,,,6o3l_A_B_E,False
6i9i,H,L,0,D,protein,,glycoprotein,VIRAL PROTEIN,11/23/18,Rift valley fever virus Gn in complex with a neutralizing antibody fragment,ORYCTOLAGUS CUNICULUS; RIFT VALLEY FEVER VIRUS,oryctolagus cuniculus,oryctolagus cuniculus,rift valley fever virus,"Allen, E.R., Bowden, T.A.",1.98,X-RAY DIFFRACTION,0.243,0.203,False,True,IGHV1,IGKV1,Kappa,,,,,,6i9i_H_L_D,False
5eoc,H,L,0,P,peptide,,ala-cys-gln-leu-ile-asn-thr-asn-gly-ser-trp-his-ile-cys,IMMUNE SYSTEM,11/10/15,Crystal structure of Fab C2 in complex with a Cyclic variant of Hepatitis C Virus E2 epitope I,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,hepatitis c virus,"Berisio, R., Ruggiero, A., Sandomenico, A., Patel, A.H., Ruvo, M., Vitagliano, L.",1.98,X-RAY DIFFRACTION,0.266,0.234,False,False,IGHV1,IGKV3,Kappa,3.03e-08,-10.257147454957629,Unknown,,TBD,5eoc_H_L_P,False
8gy5,H,L,0,P,protein,,programmed cell death protein 1,IMMUNE SYSTEM,10/04/23,High-resolution structure of the cemiplimab Fab in complex with PD-1,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Heo, Y.-S., Jeong, T.J.",1.98,X-RAY DIFFRACTION,0.236,0.187,False,True,IGHV3,IGKV1,Kappa,,,,,,8gy5_H_L_P,False
8be1,A,B,0,C,protein,,spike protein s1,IMMUNE SYSTEM,01/25/23,SARS-CoV-2 RBD in complex with a Fab fragment of a neutralising antibody mRBD2,Mus musculus; Severe acute respiratory syndrome coronavirus 2,mus musculus,mus musculus,severe acute respiratory syndrome coronavirus2 ,"Lulla, A., Brear, P., Fischer, K., Hollfelder, F., Hyvonen, M.",1.98,X-RAY DIFFRACTION,0.284,0.248,False,True,IGHV1,IGKV9,Kappa,,,,,,8be1_A_B_C,False
8u08,H,L,0,C,protein,,10e8-gt11 epitope scaffold,IMMUNE SYSTEM,06/12/24,Crystal structure of 10E8-GT11 scaffold in complex with a human 10E8 inferred germline (10E8-iGL1),Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Irimia, A., Wilson, I.A.",1.98,X-RAY DIFFRACTION,0.236,0.186,False,True,IGHV3,IGLV3,Lambda,,,,,,8u08_H_L_C,False
6mqc,A,B,0,D,peptide,,hiv fusion peptide residue 512-519,IMMUNE SYSTEM,10/09/18,Vaccine-elicited NHP FP-targeting neutralizing antibody 0PV-c.01 in complex with FP (residue 512-519),PLATYRRHINI; SYNTHETIC CONSTRUCT,platyrrhini,platyrrhini,human immunodeficiency virus 1,"Xu, K., Wang, Y., Kwong, P.D.",1.99,X-RAY DIFFRACTION,0.234,0.199,False,True,IGHV4,IGKV2,Kappa,,,,,,6mqc_A_B_D,False
8xn9,H,D,0,A,protein,,fusion glycoprotein f0,ANTIVIRAL PROTEIN/IMMUNE SYSTEM,07/10/24,Nipah virus fusion glycoprotein in complex with a broadly neutralizing antibody 1D6,Henipavirus nipahense; Macaca,macaca,macaca,henipavirus nipahense,"Fan, P.F., Ren, Y., Yu, C.M., Chen, W.",1.99,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGLV1,Lambda,,,,,,8xn9_H_D_A,False
3ley,H,L,0,P,peptide,,envelope glycoprotein gp41,IMMUNE SYSTEM,01/15/10,2F5 Epitope scaffold elicited anti-HIV-1 monoclonal antibody 6a7 in complex with HIV-1 GP41,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,human immunodeficiency virus 1,"Ofek, G., Guenaga, F.J., Schief, W.R., Skinner, J., Baker, D., Wyatt, R., Kwong, P.D.",1.99,X-RAY DIFFRACTION,0.215,0.177,False,False,IGHV3,IGKV1,Kappa,,,,,,3ley_H_L_P,False
6meh,H,L,0,C,protein,,e2 glycoprotein,IMMUNE SYSTEM,09/06/18,Broadly neutralizing antibodies against HCV use a CDRH3 disulfide motif to recognize an E2 glycoprotein site that can be targeted for vaccine design,HEPACIVIRUS C; HOMO SAPIENS,homo sapiens,homo sapiens,hepacivirus c,"Flyak, A.I., Bjorkman, P.J.",1.99,X-RAY DIFFRACTION,0.230,0.186,False,True,IGHV1,IGKV1,Kappa,,,,,,6meh_H_L_C,False
9c7d,H,L,0,B,peptide,,circumsporozoite protein,IMMUNE SYSTEM,12/25/24,Human monoclonal antibody MAD22-38 bound to the N-terminus of cleaved circumsporozoite protein,Homo sapiens; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,plasmodium falciparum 3d7,"Moskovitz, R., Wilson, I.A.",1.99,X-RAY DIFFRACTION,0.232,0.184,False,True,IGHV4,IGKV1,Kappa,,,,,,9c7d_H_L_B,False
8av9,H,L,0,A,protein,,induced myeloid leukemia cell differentiation protein mcl-1 ,APOPTOSIS,05/24/23,INDUCED MYELOID LEUKEMIA CELL DIFFERENTIATION PROTEIN FABCOMPLEX IN COMPLEX WITH COMPOUND 1,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Hargreaves, D.",1.99,X-RAY DIFFRACTION,0.272,0.223,False,True,IGHV3,IGLV1,Lambda,,,,,,8av9_H_L_A,False
5l6y,H,L,0,C,protein,,interleukin-13,IMMUNE SYSTEM,06/01/16,il13 in complex with tralokinumab,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Breed, J.",1.99,X-RAY DIFFRACTION,0.211,0.189,False,True,IGHV1,IGLV3,Lambda,5.8e-11,-13.965182855604231,SPR,,TBD,5l6y_H_L_C,False
2ny1,D,C,0,A,protein,,envelope glycoprotein gp120,VIRAL PROTEIN/IMMUNE SYSTEM,11/20/06,"HIV-1 gp120 Envelope Glycoprotein (I109C, T257S, S334A, S375W, Q428C) Complexed with CD4 and Antibody 17b",HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Zhou, T., Xu, L., Dey, B., Hessell, A.J., Van Ryk, D., Xiang, S.H., Yang, X, Zhang, M.Y., Zwick, M.B., Arthos, J., Burton, D.R., Dimitrov, D.S., Sodroski, J., Wyatt, R., Nabel, G.J., Kwong, P.D.",1.99,X-RAY DIFFRACTION,0.250,0.209,False,True,IGHV1,IGKV3,Kappa,2.02e-07,,SPR,,17301785,2ny1_D_C_A,False
9ua9,I,F,0,B,protein,,fusion glycoprotein f0,VIRAL PROTEIN/IMMUNE SYSTEM,04/09/25,Nipah virus fusion glycoprotein in complex with a broadly neutralizing antibody 1D6,Henipavirus nipahense; Macaca,macaca,macaca,henipavirus nipahense,"Fan, P.F., Ren, Y., Yu, C.M., Chen, W.",1.99,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGLV1,Lambda,,,,,,9ua9_I_F_B,False
5ggs,C,D,0,Y,protein,,programmed cell death protein 1,IMMUNE SYSTEM,06/16/16,PD-1 in complex with pembrolizumab Fab,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,homo sapiens,"Heo, Y.S.",1.997,X-RAY DIFFRACTION,0.228,0.180,False,True,IGHV1,IGKV3,Kappa,,,,,,5ggs_C_D_Y,False
7c88,A,B,0,C,protein,,programmed cell death 1 ligand 1,IMMUNE SYSTEM,05/29/20,Complex structure of JS003 and PD-L1,MUS MUSCULUS; HOMO SAPIENS,mus musculus,mus musculus,homo sapiens,"Bi, X., Shi, R., Chai, Y., Qi, J., Yan, J., Tan, S.",1.997,X-RAY DIFFRACTION,0.258,0.222,False,True,IGHV4,IGKV4,Kappa,,,,,,7c88_A_B_C,False
5w5z,H,L,0,A,protein,,apoptosis regulator bax,APOPTOSIS,06/16/17,Crystal structure of BAXP168G in complex with an activating antibody at high resolution,HOMO SAPIENS; RATTUS NORVEGICUS,rattus norvegicus,rattus norvegicus,homo sapiens,"Robin, A.Y., Colman, P.M., Czabotar, P.E.",1.997,X-RAY DIFFRACTION,0.268,0.217,False,False,IGHV1,IGKV22,Kappa,,,,,,5w5z_H_L_A,False
4ojf,H,L,0,A,peptide,,amyloid beta a4 protein,Immune System,01/21/14,Humanised 3D6 Fab complexed to amyloid beta 1-8,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Miles, L.A., Crespi, G.A.N., Parker, M.W.",1.998,X-RAY DIFFRACTION,0.215,0.172,False,True,IGHV3,IGKV2,Kappa,,,,,,4ojf_H_L_A,False
5ggv,H,L,0,Y,protein,,cytotoxic t-lymphocyte protein 4,IMMUNE SYSTEM,06/16/16,CTLA-4 in complex with tremelimumab Fab,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,homo sapiens,"Heo, Y.S.",1.998,X-RAY DIFFRACTION,0.214,0.181,False,True,IGHV3,IGKV1,Kappa,,,,,,5ggv_H_L_Y,False
7udh,E,F,0,C,protein,,integrin alpha-iib heavy chain,CELL ADHESION/INHIBITOR,08/17/22,Integrin alaphIIBbeta3 complex with BMS4-3,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Lin, F.-Y., Zhu, J., Zhu, J., Springer, T.A.",1.99999,X-RAY DIFFRACTION,0.214,0.185,False,True,IGHV14,IGKV14,Kappa,,,,,,7udh_E_F_C,False
7lki,D,E,0,F,peptide,,unknown,VIRUS,02/02/21,The crystal structure of Epitope III of HCV envelop protein E2 in complex with antibody 1H8,MUS MUSCULUS; HEPACIVIRUS C,,,,"Deng, L., Zhang, P.",2.0,X-RAY DIFFRACTION,0.294,0.245,False,False,IGHV6,IGKV1,Kappa,,,,,,7lki_D_E_F,False
4xh2,C,D,0,c,peptide,,unknown,CELL ADHESION,01/04/15,Crystal structure of human paxillin LD4 motif in complex with Fab fragment,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,synthetic construct,"Nocula-Lugowska, M., Lugowski, M., Salgia, R., Kossiakoff, A.A.",2.0,X-RAY DIFFRACTION,0.258,0.224,False,True,IGHV3,IGKV1,Kappa,6.000000000000001e-09,-11.216608560689204,Unknown,,TBD,4xh2_C_D_c,False
2qhr,H,L,0,P,peptide,,envelope glycoprotein peptide,Immune system/viral protein,07/02/07,Crystal structure of the 13F6-1-2 Fab fragment bound to its Ebola virus glycoprotein peptide epitope.,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,,"Lee, J.E., Kuehne, A., Abelson, D.M., Fusco, M.L., Hart, M.K., Saphire, E.O.",2.0,X-RAY DIFFRACTION,0.245,0.203,False,False,IGHV5,IGLV3,Lambda,4.1e-08,-10.07,SPR,25.0,18005986,2qhr_H_L_P,False
6a3w,J,K,0,L,protein,,tumor necrosis factor receptor superfamily member 9,IMMUNE SYSTEM,06/17/18,Complex structure of 4-1BB and utomilumab,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Li, Y., Tan, S., Zhang, C., Chai, Y., Qi, J., Tien, P., Gao, S., Gao, G.F.",2.0,X-RAY DIFFRACTION,0.215,0.185,False,True,IGHV5,IGLV3,Lambda,,,,,,6a3w_J_K_L,False
6xli,A,B,0,E,peptide,,tau phosphopeptide (ac-sr(pt)pslp(pt)pptre-oh),IMMUNE SYSTEM,06/28/20,CRYSTAL STRUCTURE OF ANTI-TAU ANTIBODY PT3 Fab+pT212/pT217-TAU PEPTIDE,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Malia, T.J., Teplyakov, A., Luo, J.",2.0,X-RAY DIFFRACTION,0.213,0.186,False,True,IGHV5,IGKV14,Kappa,,,,,,6xli_A_B_E,False
5u3n,H,L,0,A,peptide,,gp41 mper peptide,IMMUNE SYSTEM/VIRAL PROTEIN,12/02/16,Crystal Structure of DH511.12P Fab in Complex with HIV-1 gp41 MPER Peptide,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Ofek, G., Wu, L., Lougheed, C.S., Williams, L.D., Nicely, N.I., Haynes, B.F.",2.0,X-RAY DIFFRACTION,0.228,0.182,False,True,IGHV3,IGKV1,Kappa,,,,,,5u3n_H_L_A,False
2b1h,H,L,0,P,peptide,,ug29 peptide of exterior membrane glycoprotein gp120,IMMMUNE SYSTEM,09/15/05,Crystal structure analysis of anti-HIV-1 V3 Fab 2219 in complex with UG29 peptide,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,,"Stanfield, R.L., Gorny, M.K., Zolla-Pazner, S., Wilson, I.A.",2.0,X-RAY DIFFRACTION,0.238,0.205,False,False,IGHV5,IGLV1,Lambda,,,,,,2b1h_H_L_P,False
9jbq,A,B,0,C,protein,,pcrv,ANTIMICROBIAL PROTEIN/IMMUNE SYSTEM,09/11/24,Structure of the complex between h1F3 Fab and PcrV fragment,Homo sapiens; Pseudomonas aeruginosa,homo sapiens,homo sapiens,pseudomonas aeruginosa,"Numata, S., Hara, T., Izawa, M., Okuno, Y., Sato, Y., Yamane, S., Maki, H., Sato, T., Yamano, Y.",2.0,X-RAY DIFFRACTION,0.216,0.169,False,True,IGHV1,IGKV1,Kappa,,,,,,9jbq_A_B_C,False
6flc,B,A,0,I,protein,,domain iii of dengue virus 2,VIRAL PROTEIN,01/25/18,2C8 Fab bound to EDIII of DenV 2,MUS MUSCULUS; DENGUE VIRUS 2,mus musculus,mus musculus,dengue virus 2,"Flanagan, A., Renner, M., Grimes, J.M.",2.0,X-RAY DIFFRACTION,0.216,0.180,False,True,IGHV7,IGKV12,Kappa,1.767e-07,-9.212417624520992,SPR,,TBD,6flc_B_A_I,False
7kyl,X,Y,0,Z,protein,,envelope protein domain iii,VIRAL PROTEIN/IMMUNE SYSTEM,12/08/20,Powassan virus Envelope protein DIII in complex with neutralizing Fab POWV-80,POWASSAN VIRUS; MUS MUSCULUS,mus musculus,mus musculus,powassan virus,"Errico, J.M., Nelson, C.A., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID)",2.0,X-RAY DIFFRACTION,0.224,0.190,False,False,IGHV5,IGKV4,Kappa,,,,,,7kyl_X_Y_Z,False
7ket,A,B,0,C,protein,,factor h binding protein,IMMUNE SYSTEM,10/12/20,Factor H enhancing human antibody fragment (Fab) to meningococcal Factor H binding protein,HOMO SAPIENS; NEISSERIA MENINGITIDIS,homo sapiens,homo sapiens,neisseria meningitidis,"Beernink, P.T., Sands, N.",2.0,X-RAY DIFFRACTION,0.281,0.234,False,True,IGHV3,IGKV3,Kappa,,,,,,7ket_A_B_C,False
6phb,D,C,0,I,protein,,25 kda ookinete surface antigen,IMMUNE SYSTEM,06/25/19,Pfs25 in complex with the human transmission blocking antibody 2530,PLASMODIUM FALCIPARUM; HOMO SAPIENS,homo sapiens,homo sapiens,plasmodium falciparum,"McLeod, B.R., Julien, J.P.",2.0,X-RAY DIFFRACTION,0.209,0.177,False,True,IGHV4,IGKV1,Kappa,,,,,,6phb_D_C_I,False
7n08,H,L,0,F,peptide,,hiv-1 gp41 immunodominant region,IMMUNE SYSTEM,05/25/21,Crystal structure of the 3D6 antibody fragment bound to the HIV-1 gp41 immunodominant region,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,hiv-1 06tg.ht008,"Cook, J.D., Lee, J.E.",2.0,X-RAY DIFFRACTION,0.203,0.165,False,True,IGHV3,IGKV1,Kappa,,,,,,7n08_H_L_F,False
3l5w,H,L,0,I,protein,,interleukin-13,IMMUNE SYSTEM,12/22/09,Crystal structure of the complex between IL-13 and C836 FAB,"MUS MUSCULUS, HOMO SAPIENS; HOMO SAPIENS","mus musculus, homo sapiens","mus musculus, homo sapiens",homo sapiens,"Teplyakov, A., Obmolova, G., Malia, T., Gilliland, G.L.",2.0,X-RAY DIFFRACTION,0.253,0.205,False,True,IGHV8,IGKV16,Kappa,5.4e-11,-14.0,SPR,25.0,20226193,3l5w_H_L_I,False
6dcw,H,L,0,T,peptide,,microtubule-associated protein,IMMUNE SYSTEM,05/08/18,Crystal structure of human anti-tau antibody CBTAU-27.1 Fab in complex with a human tau peptide,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,colobus angolensis palliatus,"Zhu, X., Zhang, H., Wilson, I.A.",2.0,X-RAY DIFFRACTION,0.216,0.168,False,True,IGHV5,IGKV4,Kappa,,,,,,6dcw_H_L_T,False
7mzg,H,L,0,A,protein,,spike protein s1,VIRAL PROTEIN,05/24/21,SARS-CoV-2 receptor binding domain bound to Fab PDI 42,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Pymm, P., Chan, L.J., Dietrich, M.H., Tan, L.L., Tham, W.H.",2.0,X-RAY DIFFRACTION,0.236,0.200,False,True,IGHV3,IGKV1,Kappa,,,,,,7mzg_H_L_A,False
6blh,H,L,0,G,peptide,,major surface glycoprotein g,VIRAL PROTEIN/IMMUNE SYSTEM,11/10/17,RSV G central conserved region bound to Fab CB017.5,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,human respiratory syncytial virus a (strainrsb6256) ,"Jones, H.G., McLellan, J.S., Langedijk, J.P.",2.0,X-RAY DIFFRACTION,0.226,0.187,False,True,IGHV3,IGLV3,Lambda,4.0999999999999995e-09,-11.442210050076367,Unknown,,TBD,6blh_H_L_G,False
8rp8,H,L,0,D,protein,,leukocyte surface antigen cd47,IMMUNE SYSTEM,06/19/24,Structure of K2 Fab in complex with human CD47 ECD,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Laursen, M., Kelpsas, V., Rose, N.",2.0,X-RAY DIFFRACTION,0.214,0.180,False,True,IGHV3,IGKV1,Kappa,,,,,,8rp8_H_L_D,False
4onf,H,L,0,P,peptide,,amyloid beta a4 protein,IMMUNE SYSTEM,01/28/14,Fab fragment of 3D6 in complex with amyloid beta 1-7,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Feinberg, H., Saldanha, J.W., Diep, L., Goel, A., Widom, A., Veldman, G.M., Weis, W.I., Schenk, D., Basi, G.S.",2.0,X-RAY DIFFRACTION,0.203,0.158,False,True,IGHV5,IGKV1,Kappa,1.2e-09,-12.170174257779676,Unknown,,TBD,4onf_H_L_P,False
2uzi,H,L,0,R,protein,,gtpase hras,SIGNALING PROTEIN/IMMUNE SYSTEM,04/27/07,Crystal structure of HRAS(G12V) - anti-RAS Fv complex,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Tanaka, T., williams, R.L., Rabbitts, T.H.",2.0,X-RAY DIFFRACTION,0.271,0.194,False,True,IGHV3,IGKV1,Kappa,6.2e-09,-11.19,SPR,25.0,17568777,2uzi_H_L_R,False
8dn7,D,H,0,E,protein,,"protein toc75, chloroplastic",Membrane Protein/Immune System,05/17/23,The crystal structure of the Pisum sativum Toc75 POTRA domains in complex with fab ax9,Pisum sativum; synthetic construct,synthetic construct,synthetic construct,pisum sativum,"Srinivasan, K., Noinaj, N.",2.0,X-RAY DIFFRACTION,0.259,0.211,False,True,IGHV3,IGKV1,Kappa,,,,,,8dn7_D_H_E,False
6e56,H,J,0,A,protein,,hemagglutinin,VIRAL PROTEIN/IMMUNE SYSTEM,07/19/18,Human antibody H2214 in complex with influenza hemagglutinin A/Aichi/2/1968 (X-31) (H3N2),INFLUENZA A VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus,"McCarthy, K.R., Harrison, S.C.",2.0,X-RAY DIFFRACTION,0.214,0.188,False,True,IGHV3,IGKV3,Kappa,,,,,,6e56_H_J_A,False
6a77,H,L,0,A,protein,,roundabout homolog 1,IMMUNE SYSTEM,07/02/18,Crystal structure of the fifth immunoglobulin domain (Ig5) of human Robo1 in complex with the Fab fragment of murine monoclonal antibody B5209B,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Mizohata, E., Nakayama, T., Kado, Y., Inoue, T.",2.0,X-RAY DIFFRACTION,0.278,0.238,False,True,IGHV5,IGKV12,Kappa,,,,,,6a77_H_L_A,False
7b3o,H,L,0,E,protein,,surface glycoprotein,ANTIVIRAL PROTEIN,12/01/20,Crystal structure of the SARS-CoV-2 RBD in complex with STE90-C11 Fab,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Kluenemann, T., Van den Heuvel, J.",2.0,X-RAY DIFFRACTION,0.225,0.185,False,True,IGHV3,IGKV1,Kappa,,,,,,7b3o_H_L_E,False
1f58,H,L,0,P,peptide,,protein (exterior membrane glycoprotein(gp120)),Viral protein/Immune system,10/21/98,IGG1 FAB FRAGMENT (58.2) COMPLEX WITH 24-RESIDUE PEPTIDE (RESIDUES 308-333 OF HIV-1 GP120 (MN ISOLATE) WITH ALA TO AIB SUBSTITUTION AT POSITION 323,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,,"Stanfield, R.L., Cabezas, E., Satterthwait, A.C., Stura, E.A., Profy, A.T., Wilson, I.A.",2.0,X-RAY DIFFRACTION,0.256,0.196,False,False,IGHV3,IGKV3,Kappa,,,,,,1f58_H_L_P,False
5ea0,H,L,0,P,peptide,,complement factor h-related protein 2,IMMUNE SYSTEM,10/15/15,Structure of the antibody 7968 with human complement factor H-derived peptide,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,homo sapiens,"Bushey, R.T., Moody, M.A., Nicely, N.I., Alam, S.M., Haynes, B.F., Winkler, M.T., Gottlin, E.B., Campa, M.J., Liao, H.-X., Patz Jr., E.F.",2.0,X-RAY DIFFRACTION,0.275,0.196,False,True,IGHV3,IGKV4,Kappa,,,,,,5ea0_H_L_P,False
1fns,H,L,0,A,protein,,von willebrand factor,IMMUNE SYSTEM,08/23/00,CRYSTAL STRUCTURE OF THE VON WILLEBRAND FACTOR (VWF) A1 DOMAIN I546V MUTANT IN COMPLEX WITH THE FUNCTION BLOCKING FAB NMC4,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Varughese, K.I.",2.0,X-RAY DIFFRACTION,0.207,0.172,False,False,IGHV2,IGKV10,Kappa,,,,,,1fns_H_L_A,False
5ngv,H,L,0,A,protein,,activin receptor type-2b,TRANSFERASE,03/20/17,"CRYSTAL STRUCTURE OF THE Activin receptor type-2B LIGAND BINDING DOMAIN IN COMPLEX WITH BIMAGRUMAB FV, ORTHORHOMBIC CRYSTAL FORM",HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"RONDEAU, J.-M., LEHMANN, S.",2.0,X-RAY DIFFRACTION,0.198,0.177,False,True,IGHV1,IGLV2,Lambda,1.6e-11,-14.728215503643929,Unknown,,TBD,5ngv_H_L_A,False
6yxk,A,B,0,C,peptide,,citrullinated vimentin (59-74),IMMUNE SYSTEM,05/03/20,Crystal structure of ACPA 3F3 in complex with cit-vimentin 59-74,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,homo sapiens,"Ge, C., Holmdahl, R.",2.0,X-RAY DIFFRACTION,0.253,0.211,False,True,unknown,IGKV4,Kappa,,,,,,6yxk_A_B_C,False
5e94,B,A,0,G,protein,,glucagon-like peptide 1 receptor,MEMBRANE PROTEIN,10/14/15,Antibody-bound Glucagon-like Peptide-1 receptor extracellular domain,MUS MUSCULUS; HOMO SAPIENS,mus musculus,mus musculus,homo sapiens,"Soroka, V., Schluckebier, G., Reedtz-Runge, S.",2.0,X-RAY DIFFRACTION,0.232,0.188,False,True,IGHV3,IGKV10,Kappa,,,,,,5e94_B_A_G,False
6o23,C,D,0,E,peptide,,circumsporozoite protein,IMMUNE SYSTEM,02/22/19,Crystal structure of 2243 Fab in complex with circumsporozoite protein NANP5,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,plasmodium falciparum,"Scally, S.W., Bosch, A., Prieto, K., Murugan, R., Wardemann, H., Julien, J.P.",2.0,X-RAY DIFFRACTION,0.224,0.186,False,True,IGHV3,IGKV1,Kappa,,,,,,6o23_C_D_E,False
8d47,H,L,0,C,peptide,,sars-cov-2 fusion peptide,ANTIVIRAL PROTEIN,12/21/22,fp.006 Fab in complex with SARS-CoV-2 Fusion Peptide,Homo sapiens; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Abernathy, M.E., Barnes, C.O.",2.0,X-RAY DIFFRACTION,0.238,0.184,False,True,IGHV3,IGKV3,Kappa,,,,,,8d47_H_L_C,False
1iqd,B,A,0,C,protein,,human factor viii,IMMUNE SYSTEM/BLOOD CLOTTING,07/21/01,Human Factor VIII C2 Domain complexed to human monoclonal BO2C11 Fab.,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Spiegel Jr., P.C., Jacquemin, M., Saint-Remy, J.M., Stoddard, B.L., Pratt, K.P.",2.0,X-RAY DIFFRACTION,0.253,0.203,False,False,IGHV1,IGKV3,Kappa,1.4e-11,-14.8,SPR,,9657749,1iqd_B_A_C,False
9mer,H,L,0,B,protein,,h1h5 ha,VIRAL PROTEIN/IMMUNE SYSTEM,03/19/25,Structure of H1H5:FluA20 Chimeric Influenza HA Complex,Homo sapiens; Influenza A virus,homo sapiens,homo sapiens,influenza a virus,"Seraj, N.",2.0,X-RAY DIFFRACTION,0.215,0.206,False,True,IGHV4,IGKV1,Kappa,,,,,,9mer_H_L_B,False
8dfg,I,M,0,B,protein,,merozoite surface protein 1,STRUCTURAL PROTEIN/IMMUNE SYSTEM,10/12/22,Crystal structure of potently neutralizing human monoclonal antibody 42D6 Fab in complex with MSP1-19,Homo sapiens; Plasmodium falciparum 3D7,homo sapiens,homo sapiens,plasmodium falciparum 3d7,"Patel, P.N., Tang, W.K., Tolia, N.H.",2.0,X-RAY DIFFRACTION,0.266,0.225,False,True,IGHV4,IGKV3,Kappa,,,,,,8dfg_I_M_B,False
3se9,H,L,0,G,protein,,hiv-1 clade ae strain 93th057 gp120,VIRAL PROTEIN/IMMUNE SYSTEM,06/10/11,Crystal structure of broadly and potently neutralizing antibody VRC-PG04 in complex with HIV-1 gp120,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Kwong, P.D., Zhou, T.",2.0,X-RAY DIFFRACTION,0.233,0.190,False,True,IGHV1,IGKV3,Kappa,,,,,,3se9_H_L_G,True
7n0x,H,L,0,G,peptide,,glycoprotein 120,IMMUNE SYSTEM,05/26/21,Rhesusized RV144 DH827 Fab bound to HIV-1 Env V2 peptide,MACACA MULATTA; SYNTHETIC CONSTRUCT,macaca mulatta,macaca mulatta,human immunodeficiency virus 1,"Tolbert, W.D., Pazgier, M.",2.0,X-RAY DIFFRACTION,0.209,0.181,False,True,IGHV3,IGLV3,Lambda,,,,,,7n0x_H_L_G,False
1h0d,B,A,0,C,protein,,angiogenin,IMMUNE SYSTEM/HYDROLASE,06/19/02,Crystal structure of Human Angiogenin in complex with Fab fragment of its monoclonal antibody mAb 26-2F,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Chavali, G.B., Papageorgiou, A.C., Acharya, K.R.",2.0,X-RAY DIFFRACTION,0.272,0.232,False,True,IGHV5,IGKV3,Kappa,,,,,,1h0d_B_A_C,False
3ujj,H,L,0,P,peptide,,gp120,IMMUNE SYSTEM,11/07/11,Crystal structure of anti-HIV-1 V3 Fab 4025 in complex with Con A peptide,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Kong, X.P., Sampson, J.",2.0,X-RAY DIFFRACTION,0.213,0.177,False,False,IGHV5,IGLV3,Lambda,,,,,,3ujj_H_L_P,False
6iea,H,L,0,A,protein,,nsmgngc,STRUCTURAL PROTEIN/IMMUNE SYSTEM,04/10/19,Structure of RVFV Gn and human monoclonal antibody R13,RIFT VALLEY FEVER VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,rift valley fever virus,"Wang, Q.H., Wu, Y., Gao, F., Qi, J.X., Gao, G.F.",2.0,X-RAY DIFFRACTION,0.225,0.181,False,True,IGHV4,IGLV5,Lambda,,,,,,6iea_H_L_A,False
3ffd,A,B,0,P,peptide,,parathyroid hormone-related protein,IMMUNE SYSTEM/HORMONE,12/03/08,Structure of parathyroid hormone-related protein complexed to a neutralizing monoclonal antibody,MUS MUSCULUS; HOMO SAPIENS,mus musculus,mus musculus,homo sapiens,"Mckinstry, W.J., Polekhina, G., Diefenbach-Jagger, H., Ho, P.W.M., Sato, K., Onuma, E., Gillespie, M.T., Martin, T.J., Parker, M.W.",2.0,X-RAY DIFFRACTION,0.271,0.224,False,True,IGHV5,IGLV3,Lambda,,,,,,3ffd_A_B_P,False
6vy4,C,D,0,B,protein,,receptor binding protein,VIRAL PROTEIN/IMMUNE SYSTEM,02/25/20,Crystal structure of Hendra receptor binding protein head domain in complex with human neutralizing antibody HENV-32,HENDRA HENIPAVIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,hendra henipavirus,"Dong, J., Crowe, J.E.",2.0,X-RAY DIFFRACTION,0.226,0.183,False,True,IGHV1,IGLV3,Lambda,,,,,,6vy4_C_D_B,False
1p2c,E,D,0,F,protein,,lysozyme c,IMMUNE SYSTEM/HYDROLASE,04/15/03,crystal structure analysis of an anti-lysozyme antibody,MUS MUSCULUS; GALLUS GALLUS,mus musculus,mus musculus,gallus gallus,"Cauerhff, A., Goldbaum, F.A., Braden, B.C.",2.0,X-RAY DIFFRACTION,0.242,0.204,False,False,IGHV1,IGKV5,Kappa,9.8e-11,-13.65,SPR,25.0,14988501,1p2c_E_D_F,False
4xvj,H,L,0,A,peptide,,hcv e2 antigen,IMMUNE SYSTEM,01/27/15,STUCTURE OF THE HEPATITIS C VIRUS ENVELOPE GLYCOPROTEIN E2 ANTIGENIC 2 REGION 412-423 BOUND TO THE BROADLY NEUTRALIZING ANTIBODY HC33.1,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,hepatitis c virus,"Li, Y., Mariuzza, R.A.",2.0,X-RAY DIFFRACTION,0.274,0.225,False,True,IGHV3,IGLV1,Lambda,,,,,,4xvj_H_L_A,False
4z0x,B,A,0,C,peptide,,hcv e2 antigen (residues 432-446),IMMUNE SYSTEM,03/26/15,Structure of Hepatitis C Virus Envelope glycoprotein E2 antigenic region 434-446 bound to the broadly neutralizing antibody HC26AM,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,hepatitis c virus,"Rangarajan, S., Mariuzza, R.A.",2.0,X-RAY DIFFRACTION,0.270,0.226,False,True,IGHV1,IGLV3,Lambda,,,,,,4z0x_B_A_C,False
8ux6,B,A,0,E,peptide,,p67 protein,IMMUNE SYSTEM,10/16/24,Structure of Fab201 with a T. parva sporozoite neutralizing B cell epitope of p67,Homo sapiens; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,theileria parva strain muguga,"Singer, A.U., Gopalsamy, A., Fellouse, F.A., Miersch, S., Sidhu, S.S.",2.0,X-RAY DIFFRACTION,0.251,0.204,False,True,IGHV3,IGKV1,Kappa,,,,,,8ux6_B_A_E,False
6bfs,H,L,0,C,protein,,granulocyte-macrophage colony-stimulating factor,IMMUNE SYSTEM,10/26/17,The mechanism of GM-CSF inhibition by human GM-CSF auto-antibodies,MUS MUSCULUS; HOMO SAPIENS,mus musculus,mus musculus,homo sapiens,"Dhagat, U., Hercus, T.R., Broughton, S.E., Nero, T.L., Lopez, A.F., Parker, M.W.",2.0,X-RAY DIFFRACTION,0.248,0.182,False,True,IGHV1,IGKV15,Kappa,,,,,,6bfs_H_L_C,False
3g5v,B,A,0,C,peptide,,epidermal growth factor receptor peptide,IMMUNE SYSTEM,02/05/09,Antibodies Specifically Targeting a Locally Misfolded Region of Tumor Associated EGFR,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,,"Garrett, T.P.J., Burgess, A.W., Huyton, T., Xu, Y.",2.001,X-RAY DIFFRACTION,0.279,0.226,False,True,IGHV3,IGKV14,Kappa,8.5e-08,-9.64,SPR,25.0,19289842,3g5v_B_A_C,False
4xnq,H,L,0,C,protein,,influenza h5 ha head domain vietnam rdt mutations,Viral protein/Immune system,01/15/15,Antibody hemagglutinin Complexes,INFLUENZA A VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus,"Spiller, B.W., Winarski, K.L.",2.001,X-RAY DIFFRACTION,0.225,0.191,False,True,IGHV4,IGLV3,Lambda,,,,,,4xnq_H_L_C,False
7jwq,C,D,0,P,peptide,,il-1beta peptide,IMMUNE SYSTEM,08/26/20,Fab CJ11 in complex IL-1beta peptide liberated by Caspase cleavage,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,homo sapiens,"Payandeh, J., Ho, H.",2.001,X-RAY DIFFRACTION,0.232,0.204,False,True,IGHV1,IGKV1,Kappa,,,,,,7jwq_C_D_P,False
6pef,A,B,0,C,peptide,,hiv fusion peptide residue 512-519,IMMUNE SYSTEM,06/20/19,Vaccine-elicited NHP FP-targeting antibody DF2F-a.01 in complex with HIV fusion peptide (residue 512-519),MACACA MULATTA; SYNTHETIC CONSTRUCT,macaca mulatta,macaca mulatta,human immunodeficiency virus 1,"Xu, K., Liu, K., Wang, Y., Kwong, P.D.",2.004,X-RAY DIFFRACTION,0.214,0.183,False,True,IGHV4,IGLV1,Lambda,,,,,,6pef_A_B_C,False
2hkf,H,L,0,P,peptide,,carbonic anhydrase 9,immune system,07/04/06,Crystal structure of the Complex Fab M75- Peptide,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,,"Kral, V., Mader, P., Stouracova, R., Fabry, M., Horejsi, M., Brynda, J.",2.01,X-RAY DIFFRACTION,0.242,0.176,False,False,IGHV10,IGKV1,Kappa,3.1e-07,-8.89,ITC,25.0,18041760,2hkf_H_L_P,False
7ce2,Z,B,0,A,protein,,tetanus toxin,HYDROLASE,06/21/20,The Crystal structure of TeNT Hc complexed with neutralizing antibody,CLOSTRIDIUM TETANI; HOMO SAPIENS,homo sapiens,homo sapiens,clostridium tetani,"Wang, X., Wang, Y., Wu, C., Yu, J., Liao, H.",2.01,X-RAY DIFFRACTION,0.218,0.180,False,True,IGHV4,IGKV3,Kappa,,,,,,7ce2_Z_B_A,False
7tcq,H,L,0,C,peptide,,pegylated spike s2 peptide,VIRAL PROTEIN/IMMUNE SYSTEM,08/03/22,Crystal structure of SARS-CoV-2 neutralizing antibody WS6 in complex with spike S2 peptide,Mus musculus; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,severe acute respiratory syndrome coronavirus2 ,"Zhou, T., Kwong, P.D.",2.02,X-RAY DIFFRACTION,0.213,0.172,False,True,IGHV1,IGKV4,Kappa,,,,,,7tcq_H_L_C,False
8g8d,A,B,0,C,peptide,,gp41 mper peptide,IMMUNE SYSTEM,05/22/24,Crystal structure of DH1346 Fab in complex with HIV proximal MPER peptide,Homo sapiens; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Niyongabo, A., Janus, B.M., Ofek, G.",2.02,X-RAY DIFFRACTION,0.234,0.198,False,True,IGHV7,IGLV3,Lambda,,,,,,8g8d_A_B_C,False
7lf7,A,B,0,M,protein,,apolipoprotein l1,IMMUNE SYSTEM,01/15/21,Fab 6D12 bound to ApoL1 NTD,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Ultsch, M., Kirchhofer, D.",2.026,X-RAY DIFFRACTION,0.217,0.189,False,True,IGHV5,IGKV16,Kappa,,,,,,7lf7_A_B_M,False
4bz2,H,L,0,A,protein,,envelope protein,IMMUNE SYSTEM-VIRAL PROTEIN COMPLEX,07/23/13,Structure of dengue virus EDIII in complex with Fab 2D73,DENGUE VIRUS 4; MUS MUSCULUS,mus musculus,mus musculus,dengue virus 4,"Li, J., Watterson, D., Chang, C.W., Li, X.Q., Ericsson, D.J., Qiu, L.W., Cai, J.P., Chen, J., Fry, S.R., Cooper, M.A., Che, X.Y., Young, P.R., Kobe, B.",2.03,X-RAY DIFFRACTION,0.2247,0.2052,False,False,IGHV1,IGKV14,Kappa,,,,,,4bz2_H_L_A,False
1fe8,J,N,0,C,protein,,von willebrand factor,IMMUNE SYSTEM,07/21/00,CRYSTAL STRUCTURE OF THE VON WILLEBRAND FACTOR A3 DOMAIN IN COMPLEX WITH A FAB FRAGMENT OF IGG RU5 THAT INHIBITS COLLAGEN BINDING,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Bouma, B., Huizinga, E.G., Schiphorst, M.E., Sixma, J.J., Kroon, J., Gros, P.",2.03,X-RAY DIFFRACTION,0.264,0.227,False,False,IGHV2,IGKV10,Kappa,2e-06,-7.774786144141744,Unknown,,TBD,1fe8_J_N_C,False
9hk1,I,M,0,B,protein,,programmed cell death protein 1,IMMUNOSUPPRESSANT,01/15/25,PD1 signaling receptor bound to FAB Complex,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Bjorkelid, C., Paluch, C., Robertson, N.J.",2.03,X-RAY DIFFRACTION,0.276,0.210,False,True,IGHV1,IGKV1,Kappa,,,,,,9hk1_I_M_B,False
7n3i,H,L,0,C,protein,,spike protein s1,IMMUNE SYSTEM/VIRAL PROTEIN,06/01/21,Crystal structure of the SARS-CoV-2 receptor binding domain in complex with the human neutralizing antibody Fab fragment C098,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Flyak, A.I., Bjorkman, P.J., Barnes, C.O.",2.03,X-RAY DIFFRACTION,0.208,0.179,False,True,IGHV3,IGKV3,Kappa,,,,,,7n3i_H_L_C,False
4g6j,H,L,0,A,protein,,interleukin-1 beta,IMMUNE SYSTEM,07/19/12,Crystal structure of human IL-1beta in complex with the therapeutic antibody binding fragment of canakinumab,,homo sapiens,homo sapiens,homo sapiens,"Blech, M., Hoerer, S.",2.03,X-RAY DIFFRACTION,0.252,0.226,False,True,IGHV3,IGKV1,Kappa,4.0999999999999995e-09,-11.442210050076367,SPR,,TBD,4g6j_H_L_A,False
4jo1,H,L,0,P,peptide,,gp120,IMMUNE SYSTEM/VIRAL PROTEIN,03/16/13,Crystal structure of rabbit mAb R56 Fab in complex with V3 crown of HIV-1 JR-FL gp120,ORYCTOLAGUS CUNICULUS; HUMAN IMMUNODEFICIENCY VIRUS 1,oryctolagus cuniculus,oryctolagus cuniculus,human immunodeficiency virus 1,"Pan, R.M., Kong, X.P.",2.033,X-RAY DIFFRACTION,0.223,0.181,False,True,IGHV1,IGKV1,Kappa,,,,,,4jo1_H_L_P,False
6mtp,H,L,0,P,peptide,,rv217 founder virus gp41 peptide,IMMUNE SYSTEM,10/21/18,Crystal structure of VRC42.04 Fab in complex with gp41 peptide,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Kwon, Y.D., Druz, A., Law, W.H., Peng, D., Zhang, B., Doria-Rose, N.A., Kwong, P.D.",2.036,X-RAY DIFFRACTION,0.223,0.199,False,True,IGHV1,IGKV3,Kappa,,,,,,6mtp_H_L_P,False
7a0w,C,D,0,A,protein,,na(+)/h(+) antiporter nhaa,MEMBRANE PROTEIN,08/11/20,"Structure of dimeric sodium proton antiporter NhaA, at pH 8.5, crystallized with chimeric Fab antibodies",SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR TYPHIMURIUM STR. LT2; GALLUS GALLUS; HOMO SAPIENS,"gallus gallus, homo sapiens","gallus gallus, homo sapiens",salmonella enterica subsp. enterica serovartyphimurium str. lt2 ,"Fippel, A., Gross, N.M., Mir, S.H., Wirth, C., Hunte, C.",2.04,X-RAY DIFFRACTION,0.235,0.198,False,True,unknown,unknown,unknown,,,,,,7a0w_C_D_A,False
7bek,H,L,0,E,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,12/23/20,Crystal structure of the receptor binding domain of SARS-CoV-2 Spike glycoprotein in complex with COVOX-158 Fab (crystal form 2),HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, D., Zhao, Y., Ren, J., Stuart, D.",2.04,X-RAY DIFFRACTION,0.220,0.200,False,True,IGHV3,IGKV1,Kappa,,,,,,7bek_H_L_E,False
8ykt,H,L,0,A,protein,,enterotoxin type b,PROTEIN BINDING/IMMUNE SYSTEM,03/12/25,Fab and SEB complex,Homo sapiens; Staphylococcus aureus,homo sapiens,homo sapiens,staphylococcus aureus,"Zeng, H., Fan, H.Y.",2.04,X-RAY DIFFRACTION,0.230,0.195,False,True,IGHV3,IGLV1,Lambda,,,,,,8ykt_H_L_A,False
6r8x,C,B,0,A,protein,,coagulation factor xi,BLOOD CLOTTING,04/10/19,COAGULATION FACTOR XI CATALYTIC DOMAIN IN COMPLEX WITH FAB-PORTION OF MAA868,HOMO SAPIENS; UNIDENTIFIED,unidentified,unidentified,homo sapiens,"Schiering, N., Koch, A.",2.04,X-RAY DIFFRACTION,0.282,0.220,False,True,IGHV3,IGLV1,Lambda,,,,,,6r8x_C_B_A,False
8slb,H,L,0,A,protein,,cobalt/magnesium transport protein cora,METAL TRANSPORT,06/07/23,X-ray structure of CorA N-terminal domain in complex with conformation-specific synthetic antibody C12,Homo sapiens; Thermotoga maritima MSB8,homo sapiens,homo sapiens,thermotoga maritima msb8,"Dominik, P.K., Erramilli, S.K., Reddy, B.G., Kossiakoff, A.A.",2.04,X-RAY DIFFRACTION,0.218,0.166,False,True,IGHV3,IGKV1,Kappa,,,,,,8slb_H_L_A,False
3ma9,H,L,0,A,protein,,transmembrane glycoprotein,IMMUNE SYSTEM,03/23/10,Crystal structure of gp41 derived protein complexed with fab 8066,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Li, M., Gustchina, E., Louis, J., Gustchina, A., Wlodawer, A., Clore, M.",2.05,X-RAY DIFFRACTION,0.245,0.193,False,True,IGHV1,IGLV3,Lambda,1e-08,-11.02,ITC,28.0,21085615,3ma9_H_L_A,False
3pnw,B,A,0,C,protein,,tudor domain-containing protein 3,PROTEIN BINDING/IMMUNE SYSTEM,11/19/10,Crystal Structure of the tudor domain of human TDRD3 in complex with an anti-TDRD3 FAB,"HOMO SAPIENS, SYNTHETIC CONSTRUCT; HOMO SAPIENS",synthetic,synthetic,homo sapiens,"Loppnau, P., Tempel, W., Wernimont, A.K., Lam, R., Ravichandran, M., Adams-Cioaba, M.A., Persson, H., Sidhu, S.S., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Weigelt, J., Cossar, D., Structural Genomics Consortium (SGC)",2.05,X-RAY DIFFRACTION,0.264,0.223,False,True,IGHV3,IGKV1,Kappa,,,,,,3pnw_B_A_C,False
2xqy,J,K,0,E,protein,,envelope glycoprotein h,IMMUNE SYSTEM/VIRAL PROTEIN,09/08/10,Crystal structure of Pseudorabies core fragment of glycoprotein H in  complex with Fab d6.3,SUID HERPESVIRUS; MUS MUSCULUS,mus musculus,mus musculus,suid herpesvirus,"Backovic, M., Dubois, R., Cockburn, J., Sharff, A., Vaney, M., Granzow, H., Klupp, B., Bricogne, G., Mettenleiter, T., Rey, F.",2.05,X-RAY DIFFRACTION,0.2046,0.1878,False,True,IGHV1,IGKV3,Kappa,,,,,,2xqy_J_K_E,False
5aum,A,B,0,D,peptide,,peptide renlyfqgkdg,IMMUNE SYSTEM/PEPTIDE,04/30/15,Crystal structure of a Fab fragment with the ligand peptide,RATTUS; SYNTHETIC CONSTRUCT,rattus,rattus,potyviridae,"Kitago, Y., Takagi, J.",2.05,X-RAY DIFFRACTION,0.221,0.189,False,True,IGHV10,IGKV2,Kappa,,,,,,5aum_A_B_D,False
4jzn,I,P,0,K,peptide,,envelope glycoprotein e2,immune system/viral protein,04/03/13,Three dimensional structure of broadly neutralizing human anti - Hepatitis C virus (HCV) glycoprotein E2 Fab fragment HC84-1,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,hepatitis c virus (isolate h),"Krey, T., Rey, F.A.",2.05,X-RAY DIFFRACTION,0.235,0.198,False,True,IGHV1,IGLV3,Lambda,,,,,,4jzn_I_P_K,False
7s4s,H,L,0,A,protein,,spike protein s1,VIRAL PROTEIN/Immune System,09/09/21,Crystal Structure of SARS-CoV-2 S receptor-binding domain (RBD) in complex CoV11 Fab,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Tolbert, W.D., Pazgier, M.",2.05,X-RAY DIFFRACTION,0.198,0.166,False,True,IGHV3,IGKV3,Kappa,,,,,,7s4s_H_L_A,False
7coe,H,L,0,A,protein,,spike glycoprotein,IMMUNE SYSTEM,08/04/20,Crystal structure of Receptor binding domain of MERS-CoV and KNIH90-F1 Fab complex,HOMO SAPIENS; MIDDLE EAST RESPIRATORY SYNDROME-RELATED CORONAVIRUS,homo sapiens,homo sapiens,middle east respiratory syndrome-relatedcoronavirus ,"Lee, J.Y., Song, J.Y., Lee, H.S., Hong, E., Jang, T.H.",2.05,X-RAY DIFFRACTION,0.223,0.176,False,True,IGHV1,IGKV3,Kappa,,,,,,7coe_H_L_A,False
6ddv,B,A,0,C,protein,,mhc class i chain-related protein a,IMMUNE SYSTEM,05/10/18,Crystal Structure Analysis of the Epitope of an Anti-MICA Antibody,MUS MUSCULUS; HOMO SAPIENS,mus musculus,mus musculus,homo sapiens,"Matsumoto, M.L.",2.05,X-RAY DIFFRACTION,0.275,0.223,False,True,IGHV1,IGKV1,Kappa,5.78e-09,-11.238741254569952,ITC,,TBD,6ddv_B_A_C,False
5y9j,H,L,0,A,protein,,tumor necrosis factor ligand superfamily member 13b,PROTEIN BINDING,08/25/17,BAFF in complex with belimumab,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Heo, Y.-S., Shin, W.",2.05,X-RAY DIFFRACTION,0.217,0.180,False,True,IGHV1,IGLV3,Lambda,,,,,,5y9j_H_L_A,False
4ydk,H,L,0,G,protein,,"envelope glycoprotein gp160,envelope glycoprotein gp160",IMMUNE SYSTEM,02/22/15,Crystal structure of broadly and potently neutralizing antibody C38-VRC16.01 in complex with HIV-1 clade AE strain 93TH057 gp120,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Zhou, T., Moquin, S., Zheng, A., Kwong, P.D.",2.051,X-RAY DIFFRACTION,0.206,0.166,False,True,IGHV3,IGKV1,Kappa,,,,,,4ydk_H_L_G,False
6pbw,D,C,0,E,peptide,,npnanpnanpna peptide,IMMUNE SYSTEM,06/14/19,Crystal structure of Fab667 complex,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,plasmodium falciparum 3d7,"Oyen, D., Wilson, I.A.",2.058,X-RAY DIFFRACTION,0.258,0.202,False,True,IGHV1,IGLV2,Lambda,,,,,,6pbw_D_C_E,False
5ikc,B,A,0,M,protein,,neuronal migration protein doublecortin,TRANSFERASE,03/03/16,X-RAY STRUCURE OF THE N-TERMINAL DOMAIN OF HUMAN DOUBLECORTIN in complex with FAB,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Ruf, A., Stihle, M., Benz, J., Thoma, R., Rudolph, M.G.",2.06,X-RAY DIFFRACTION,0.265,0.198,False,True,IGHV14,IGKV6,Kappa,2.7e-08,-10.325467249642376,SPR,,TBD,5ikc_B_A_M,False
7uvs,D,E,0,F,protein,,gametocyte surface protein p230,CELL INVASION/IMMUNE SYSTEM,02/15/23,Pfs230 domain 1 bound by LMIV230-02 Fab,Homo sapiens; Plasmodium falciparum,homo sapiens,homo sapiens,plasmodium falciparum,"Ivanochko, D., Julien, J.P.",2.06,X-RAY DIFFRACTION,0.215,0.174,False,True,IGHV1,IGKV4,Kappa,,,,,,7uvs_D_E_F,False
6uyf,H,L,0,E,protein,,envelope glycoprotein e2,VIRAL PROEIN/IMMUNE SYSTEM,11/13/19,Structure of Hepatitis C Virus Envelope Glycoprotein E2mc3-v1 redesigned core from genotype 6a bound to broadly neutralizing antibody AR3B,HOMO SAPIENS; RECOMBINANT HEPATITIS C VIRUS HK6A/JFH-1,homo sapiens,homo sapiens,recombinant hepatitis c virus hk6a/jfh-1,"Tzarum, N., Wilson, I.A., Zhu, J.",2.06,X-RAY DIFFRACTION,0.232,0.189,False,True,IGHV1,IGKV3,Kappa,,,,,,6uyf_H_L_E,False
8jeo,B,C,0,A,protein,,t-cell immunoreceptor with ig and itim domains,IMMUNE SYSTEM,02/28/24,Crystal structure of TIGIT in complexed with Tiragolumab,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Sun, J., Zhang, X.X., Song, J.",2.06,X-RAY DIFFRACTION,0.206,0.172,False,True,IGHV6,IGKV4,Kappa,,,,,,8jeo_B_C_A,False
9kur,H,L,0,B,protein,,nucleoprotein,VIRAL PROTEIN,10/15/25,Crystal structure of mAb nCoV400Fab with SARS-CoV-2 N-CTD Complex,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Xue, S.J., Chen, S.D.",2.06,X-RAY DIFFRACTION,0.249,0.199,False,True,IGHV3,IGLV3,Lambda,,,,,,9kur_H_L_B,False
5t5b,H,L,0,E,protein,,10e8 epitope scaffold t117v2,IMMUNE SYSTEM,08/30/16,CRYSTAL STRUCTURE OF THE COMPLEX OF 10E8 FAB LIGHT CHAIN MUTANT5 AND T117V2 HIV-1 MPER SCAFFOLD,SYNTHETIC CONSTRUCT; HOMO SAPIENS,homo sapiens,homo sapiens,synthetic construct,"Irimia, A., Wilson, I.A.",2.07,X-RAY DIFFRACTION,0.216,0.178,False,True,IGHV3,IGLV3,Lambda,1.23e-10,-13.519788377213574,SPR,,TBD,5t5b_H_L_E,False
9bdi,C,D,0,B,protein,,gt10.2 glycan ko,VIRAL PROTEIN,02/19/25,Crystal structure of HIV-1 MPER scaffold in complex with antibody Fab Ab45.2,Mus musculus,mus musculus,mus musculus,mus musculus,"Lee, C.C.D., Wilson, I.A.",2.07,X-RAY DIFFRACTION,0.283,0.235,False,True,IGHV3,IGKV12,Kappa,,,,,,9bdi_C_D_B,False
5fb8,B,A,0,C,protein,,pro-interleukin-16,IMMUNE SYSTEM,12/14/15,Structure of Interleukin-16 bound to the 14.1 antibody,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Hall, G., Cowan, R., Bayliss, R., Carr, M.",2.07,X-RAY DIFFRACTION,0.205,0.172,False,True,IGHV1,IGKV3,Kappa,,,,,,5fb8_B_A_C,False
6dfj,H,L,0,E,protein,,dengue 1 envelope diii domain,IMMUNE SYSTEM,05/14/18,Crystal structure of anti-Zika antibody Z021 bound to DENV-1 envelope protein DIII,HOMO SAPIENS; DENGUE VIRUS 1,homo sapiens,homo sapiens,dengue virus 1,"Keeffe, J.R., Bjorkman, P.J.",2.07,X-RAY DIFFRACTION,0.232,0.184,False,True,IGHV4,IGKV3,Kappa,,,,,,6dfj_H_L_E,False
8hn6,A,B,0,E,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,05/17/23,Crystal structure of monoclonal antibody complexed with SARS-CoV-2 RBD,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Qi, J., Chen, Y.",2.07,X-RAY DIFFRACTION,0.214,0.192,False,True,IGHV3,IGKV1,Kappa,,,,,,8hn6_A_B_E,False
8g8c,A,B,0,P,peptide,,env polyprotein,IMMUNE SYSTEM,05/22/24,Crystal structure of DH1322.1 Fab in complex with HIV proximal MPER peptide,Homo sapiens; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Niyongabo, A., Janus, B.M., Ofek, G.",2.08,X-RAY DIFFRACTION,0.229,0.199,False,True,IGHV7,IGKV3,Kappa,,,,,,8g8c_A_B_P,False
7cr5,H,L,0,A,protein,,nucleoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,08/12/20,Complex structure of a human monoclonal antibody with SARS-CoV-2 nucleocapsid protein NTD,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Chen, S., Kang, S.",2.08,X-RAY DIFFRACTION,0.222,0.191,False,True,IGHV3,IGLV4,Lambda,,,,,,7cr5_H_L_A,False
9iut,D,E,0,F,peptide,,h2mab-250 epitope peptide,IMMUNE SYSTEM,06/04/25,Crystal structure of cancer-specific anti-HER2 antibody H2Mab-250 in complex with epitope peptide,Mus musculus; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Arimori, T., Takagi, J.",2.09,X-RAY DIFFRACTION,0.236,0.201,False,True,IGHV5,IGKV1,Kappa,,,,,,9iut_D_E_F,False
7uvo,A,B,0,C,protein,,gametocyte surface protein p230,CELL INVASION/IMMUNE SYSTEM,02/15/23,Pfs230 domain 1 bound by RUPA-38 Fab,Homo sapiens; Plasmodium falciparum,homo sapiens,homo sapiens,plasmodium falciparum,"Ivanochko, D., Newton, J., Julien, J.P.",2.09,X-RAY DIFFRACTION,0.235,0.217,False,True,IGHV3,IGLV2,Lambda,,,,,,7uvo_A_B_C,False
6c9u,H,L,0,A,protein,,"6-deoxyerythronolide-b synthase erya2, modules 3 and 4",TRANSFERASE/immune system,01/28/18,Crystal structure of [KS3][AT3] didomain from module 3 of 6-deoxyerthronolide B synthase in complex with antibody fragment (Fab),SACCHAROPOLYSPORA ERYTHRAEA; HOMO SAPIENS,homo sapiens,homo sapiens,saccharopolyspora erythraea,"Deis, L.N., Li, X., Mathews, I.I., Khosla, C.",2.09,X-RAY DIFFRACTION,0.210,0.166,False,True,IGHV3,IGKV2,Kappa,,,,,,6c9u_H_L_A,False
8tdx,B,C,0,F,peptide,,env fusion peptide,IMMUNE SYSTEM,07/10/24,TRNM-b.01 in complex with HIV Env fusion peptide,Macaca mulatta; SYNTHETIC CONSTRUCT,macaca mulatta,macaca mulatta,human immunodeficiency virus 1,"Olia, A.S., Kwong, P.D.",2.09,X-RAY DIFFRACTION,0.240,0.204,False,True,unknown,IGKV1,Kappa,,,,,,8tdx_B_C_F,False
9i59,H,L,0,A,protein,,envelopment polyprotein,VIRAL PROTEIN,11/26/25,RVFV GnH complexed with RVFV-379 Fab,Homo sapiens; Rift Valley fever virus,homo sapiens,homo sapiens,rift valley fever virus,"Paesen, G.C., Bowden, T.A.",2.09,X-RAY DIFFRACTION,0.251,0.212,False,True,IGHV4,IGKV1,Kappa,,,,,,9i59_H_L_A,False
9i59,X,Y,0,B,protein,,envelopment polyprotein,VIRAL PROTEIN,11/26/25,RVFV GnH complexed with RVFV-379 Fab,Homo sapiens; Rift Valley fever virus,homo sapiens,homo sapiens,rift valley fever virus,"Paesen, G.C., Bowden, T.A.",2.09,X-RAY DIFFRACTION,0.251,0.212,False,True,IGHV4,IGKV1,Kappa,,,,,,9i59_X_Y_B,False
9ghj,H,L,0,A,protein,,pre-glycoprotein polyprotein gp complex,VIRAL PROTEIN,06/11/25,Junin virus GP1-GP2 heterodimer in complex with Fab of JUN1,Mammarenavirus juninense; Mus musculus,mus musculus,mus musculus,mammarenavirus juninense,"Bowden, T.A., Paesen, G.C.",2.09,X-RAY DIFFRACTION,0.247,0.212,False,True,IGHV13,IGKV6,Kappa,,,,,,9ghj_H_L_A,False
7mf1,H,L,0,A,protein,,spike protein s1,IMMUNE SYSTEM/VIRAL PROTEIN,04/08/21,Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody 47D1,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Yuan, M., Zhu, X., Wilson, I.A.",2.092,X-RAY DIFFRACTION,0.250,0.207,False,True,IGHV1,IGLV2,Lambda,,,,,,7mf1_H_L_A,False
5zv3,H,L,0,A,peptide,,peptide from microtubule-associated protein tau,IMMUNE SYSTEM,05/09/18,Crystal structure of human anti-tau antibody CBTAU-28.1 in complex with its tau peptide,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,homo sapiens,"Zhang, H., Wilson, I.A.",2.093,X-RAY DIFFRACTION,0.251,0.187,False,True,IGHV5,IGKV4,Kappa,,,,,,5zv3_H_L_A,False
7e72,A,B,0,E,protein,,angiopoietin-1 receptor,MEMBRANE PROTEIN,02/25/21,Crystal structure of Tie2-agonistic antibody in complex with human Tie2 Fn2-3,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Kim, H.M., Jo, G.H., Hong, H.J., Han, A.",2.094,X-RAY DIFFRACTION,0.233,0.183,False,True,IGHV1,IGKV9,Kappa,,,,,,7e72_A_B_E,False
6bb4,I,M,0,Q,peptide,,microtubule-associated protein tau,IMMUNE SYSTEM,10/16/17,Fab/epitope complex of mouse monoclonal antibody C5.2 targeting a phospho-tau epitope.,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Chukwu, J.E., Kong, X.-P.",2.099,X-RAY DIFFRACTION,0.270,0.218,False,False,IGHV1,IGKV11,Kappa,1.5400000000000002e-08,-10.65812868023894,Unknown,,TBD,6bb4_I_M_Q,False
6cdo,A,B,0,C,peptide,,hiv-1 fusion peptide 512-519,IMMUNE SYSTEM,02/08/18,Structure of vaccine-elicited HIV-1 neutralizing antibody vFP16.02 in complex with HIV-1 fusion peptide residue 512-519,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,human immunodeficiency virus 1,"Xu, K., Liu, K., Kwong, P.D.",2.099,X-RAY DIFFRACTION,0.226,0.194,False,True,IGHV1,IGKV1,Kappa,1.06e-09,-12.243673427577416,Unknown,,TBD,6cdo_A_B_C,False
2aep,H,L,0,A,protein,,neuraminidase,IMMUNE SYSTEM,07/23/05,An epidemiologically significant epitope of a 1998 influenza virus neuraminidase forms a highly hydrated interface in the NA-antibody complex.,MUS MUSCULUS; INFLUENZA A VIRUS,mus musculus,mus musculus,influenza a virus,"Venkatramani, L., Bochkareva, E., Lee, J.T., Gulati, U., Laver, W.G., Bochkarev, A., Air, G.M.",2.1,X-RAY DIFFRACTION,0.224,0.188,False,False,IGHV7,IGKV6,Kappa,1.2e-08,-10.8,Other,,16384583,2aep_H_L_A,False
6ztr,H,L,0,I,protein,,cadherin-3,IMMUNE SYSTEM,07/20/20,Crystal Structure of the anti-human P-Cadherin Fab CQY684 in complex with human P-Cadherin(108-324),HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Rondeau, J.M., Lehmann, S.",2.1,X-RAY DIFFRACTION,0.221,0.192,False,True,IGHV6,IGKV1,Kappa,,,,,,6ztr_H_L_I,False
6o3a,B,A,0,E,protein,,frizzled-7,SIGNALING PROTEIN,02/26/19,Crystal structure of Frizzled 7 CRD in complex with F7.B Fab,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Raman, S., Beilschmidt, M., Fransson, J., Julien, J.P.",2.1,X-RAY DIFFRACTION,0.242,0.192,False,True,IGHV3,IGKV1,Kappa,,,,,,6o3a_B_A_E,False
7a3n,H,L,0,A,protein,,core protein,VIRAL PROTEIN,08/18/20,Crystal structure of Zika virus envelope glycoprotein in complex with the Fab fragment of the broadly neutralizing human antibody EDE1 C10,ZIKA VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,zika virus,"Sharma, A., Vaney, M.C., Guardado-Calvo, P., Duquerroy, S., Rouvinski, A., Rey, F.A.",2.1,X-RAY DIFFRACTION,0.240,0.203,False,True,IGHV1,IGLV2,Lambda,,,,,,7a3n_H_L_A,False
4etq,H,L,0,C,protein,,imv membrane protein,IMMUNE SYSTEM/VIRAL PROTEIN,04/24/12,Vaccinia virus D8L IMV envelope protein in complex with Fab of murine IgG2a LA5,MUS MUSCULUS; VACCINIA VIRUS,mus musculus,mus musculus,vaccinia virus,"Matho, M.H., Zajonc, D.M.",2.1,X-RAY DIFFRACTION,0.252,0.202,False,True,IGHV1,IGKV4,Kappa,1.8e-10,-13.29418688782641,SPR,,TBD,4etq_H_L_C,False
7kpj,A,B,0,E,protein,,gram_pos_anchoring domain-containing protein,IMMUNE SYSTEM,11/11/20,Crystal structure of Ruminococcus gnavus immunoglobulin binding protein in complex with 338E6 Fab,MUS MUSCULUS; RUMINOCOCCUS GNAVUS,mus musculus,mus musculus,ruminococcus gnavus,"Borowska, M.T., Adams, E.J.",2.1,X-RAY DIFFRACTION,0.266,0.229,False,True,IGHV5,IGKV6,Kappa,,,,,,7kpj_A_B_E,False
7mlh,C,A,0,F,protein,,der p 2 variant 3,ALLERGEN/IMMUNE SYSTEM,04/28/21,Crystal structure of human IgE (2F10) in complex with Der p 2.0103,HOMO SAPIENS; DERMATOPHAGOIDES PTERONYSSINUS,homo sapiens,homo sapiens,dermatophagoides pteronyssinus,"Khatri, K., Kapingidza, A.B., Richardson, C.M., Vailes, L.D., Wunschmann, S., Dolamore, C., Chapman, M.D., Smith, S.A., Pomes, A., Chruszcz, M.",2.1,X-RAY DIFFRACTION,0.247,0.210,False,True,IGHV1,IGKV1,Kappa,,,,,,7mlh_C_A_F,False
8aon,B,C,0,A,protein,,unknown,IMMUNE SYSTEM,01/08/09,Oxidoreductase fragment of human QSOX1 in complex with a Fab fragment of a humanized anti-QSOX1 antibody,Homo sapiens,homo sapiens,homo sapiens,,"Khmelnitsky, L., Fass, D.",2.1,X-RAY DIFFRACTION,0.259,0.198,False,True,IGHV3,IGKV4,Kappa,,,,,,8aon_B_C_A,False
6a78,H,L,0,A,protein,,roundabout homolog 1,IMMUNE SYSTEM,07/02/18,Crystal structure of the fifth immunoglobulin domain (Ig5) of human Robo1 in complex with the scFv fragment of murine monoclonal antibody B5209B,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Mizohata, E., Nakayama, T., Kado, Y., Inoue, T.",2.1,X-RAY DIFFRACTION,0.285,0.239,False,True,IGHV5,IGKV12,Kappa,,,,,,6a78_H_L_A,False
5czx,C,D,0,B,protein,,neurogenic locus notch homolog protein 3,IMMUNE SYSTEM,08/01/15,Crystal structure of Notch3 NRR in complex with 20358 Fab,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Hu, T., Fryer, C., Chopra, R., Clark, K.",2.1,X-RAY DIFFRACTION,0.226,0.190,False,False,IGHV1,IGKV1,Kappa,6e-10,-12.58085265009946,SPR,,TBD,5czx_C_D_B,False
6o9h,A,B,0,C,protein,,ecd,IMMUNE SYSTEM,03/13/19,Mouse ECD with Fab1,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Min, X., Wang, Z.",2.1,X-RAY DIFFRACTION,0.248,0.203,False,True,IGHV5,IGKV8,Kappa,,,,,,6o9h_A_B_C,False
3o6l,H,L,0,C,peptide,,protein tat 15-mer peptide,IMMUNE SYSTEM,07/29/10,Anti-Tat HIV 11H6H1 Fab' complexed with a 15-mer Tat peptide,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,,"Serriere, J., Gouet, P., Guillon, C.",2.1,X-RAY DIFFRACTION,0.227,0.186,False,False,IGHV5,IGKV1,Kappa,3.1e-08,-9.93,Other,16.0,21035463,3o6l_H_L_C,False
7lr4,H,L,0,D,protein,,hapless 2,CELL ADHESION/IMMUNE SYSTEM,02/15/21,Complex of Fab 2/1.12 with domain 3 of P. berghei HAP2,MUS MUSCULUS; PLASMODIUM BERGHEI,mus musculus,mus musculus,plasmodium berghei,"Feng, J., Dong, X.C., Su, Y., Lu, X.F., Springer, T.A.",2.1,X-RAY DIFFRACTION,0.231,0.189,False,True,IGHV1,IGKV10,Kappa,,,,,,7lr4_H_L_D,False
7l7r,D,C,0,G,protein,,glycoprotein c,VIRAL PROTEIN,12/30/20,CCHFV Gc prefusion monomer bound to ADI-36121 and ADI-37801 Fabs,HOMO SAPIENS; CRIMEAN-CONGO HEMORRHAGIC FEVER VIRUS (STRAIN NIGERIA/IBAR10200/1970),homo sapiens,homo sapiens,crimean-congo hemorrhagic fever virus (strainnigeria/ibar10200/1970) ,"Mishra, A.K., McLellan, J.S.",2.1,X-RAY DIFFRACTION,0.244,0.219,False,True,IGHV4,IGKV1,Kappa,,,,,,7l7r_D_C_G,False
7y3o,H,L,0,A,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,12/27/23,Crystal structure of SARS-CoV-2 receptor binding domain in complex with human antibody BIOLS56,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Rao, X., Gao, F., Wu, Y., Gao, F.",2.1,X-RAY DIFFRACTION,0.229,0.183,False,True,IGHV3,IGKV1,Kappa,,,,,,7y3o_H_L_A,False
4ogy,H,L,0,A,protein,,plasma kallikrein,HYDROLASE/ANTIBODY,01/16/14,Crystal structure of Fab DX-2930 in complex with human plasma kallikrein at 2.1 Angstrom resolution,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Edwards, T.E., Clifton, M.C., Abendroth, J., Nixon, A., Ladner, R.",2.1,X-RAY DIFFRACTION,0.221,0.183,False,True,IGHV3,IGKV1,Kappa,,,,,,4ogy_H_L_A,False
7mzh,B,C,0,A,protein,,spike protein s1,VIRAL PROTEIN,05/24/21,SARS-CoV-2 receptor binding domain bound to Fab WCSL 119,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Pymm, P., Tan, L.L., Dietrich, M.H., Chan, L.J., Tham, W.H.",2.1,X-RAY DIFFRACTION,0.265,0.220,False,True,IGHV1,IGLV1,Lambda,,,,,,7mzh_B_C_A,False
6mv5,H,L,0,P,peptide,,proprotein convertase subtilisin/kexin type 9,IMMUNE SYSTEM,04/10/19,Anti-PCSK9 fab 6E2 bound to the N-terminal peptide from PCSK9 (E32K),MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Ultsch, M.H., Kirchhofer, D.K.",2.1,X-RAY DIFFRACTION,0.239,0.210,False,True,IGHV6,IGKV2,Kappa,,,,,,6mv5_H_L_P,False
1a3r,H,L,0,P,peptide,,human rhinovirus capsid protein vp2,VIRAL PROTEIN/IMMUNE SYSTEM,01/23/98,FAB FRAGMENT (ANTIBODY 8F5) COMPLEXED WITH PEPTIDE FROM HUMAN RHINOVIRUS (SEROTYPE 2) VIRAL CAPSID PROTEIN VP2 (RESIDUES 156-170),MUS MUSCULUS; HUMAN RHINOVIRUS 2,mus musculus,mus musculus,human rhinovirus 2,"Tormo, J., Blaas, D., Fita, I.",2.1,X-RAY DIFFRACTION,unknown,0.171,False,False,IGHV14,IGKV8,Kappa,,,,,,1a3r_H_L_P,False
5y11,A,B,0,C,protein,,membrane glycoprotein polyprotein,IMMUNE SYSTEM/VIRAL SYSTEM,07/19/17,SFTSV GN with neutralizing antibody MAb4-5,HOMO SAPIENS; SEVERE FEVER WITH THROMBOCYTOPENIA VIRUS,homo sapiens,homo sapiens,severe fever with thrombocytopenia virus,"Wu, Y., Gao, F., Qi, J.X., Chai, Y., Gao, G.F.",2.1,X-RAY DIFFRACTION,0.210,0.169,False,True,IGHV5,IGKV3,Kappa,2.59e-08,-10.350110954979534,SPR,,TBD,5y11_A_B_C,False
4olz,H,L,0,G,protein,,envelope glycoprotein gp160,VIRAL PROTEIN/IMMUNE SYSTEM,01/25/14,Crystal structure of antibody VRC07-G54W in complex with clade A/E 93TH057 HIV-1 gp120 core,HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Kwon, Y.D., Kwong, P.D.",2.1,X-RAY DIFFRACTION,0.254,0.203,False,True,unknown,IGKV3,Kappa,,,,,,4olz_H_L_G,False
7dm1,F,E,0,B,protein,,phosphate-binding protein psts 1,TRANSPROT PROTEIN/IMMUNE SYSTEM,12/01/20,crystal structure of the M.tuberculosis phosphate ABC transport receptor PstS-1 in complex with Fab p4-36,MYCOBACTERIUM TUBERCULOSIS H37RV; HOMO SAPIENS,homo sapiens,homo sapiens,mycobacterium tuberculosis h37rv,"Ma, B., Freund, N., Xiang, Y.",2.1,X-RAY DIFFRACTION,0.230,0.186,False,True,IGHV3,IGLV2,Lambda,,,,,,7dm1_F_E_B,False
7rew,H,L,0,I,protein,,il13,CYTOKINE,07/13/21,Crystal Structure of IL-13 in complex with MMAb3 Fab,HOMO SAPIENS; MACACA FASCICULARIS,homo sapiens,homo sapiens,macaca fascicularis,"Sudom, A., Min, X.",2.1,X-RAY DIFFRACTION,0.291,0.245,False,True,IGHV3,IGLV3,Lambda,,,,,,7rew_H_L_I,False
6c6z,H,L,0,B,protein,,spike protein,IMMUNE SYSTEM,01/19/18,Crystal structure of potent neutralizing antibody CDC2-C2 in complex with MERS-CoV S1 RBD,MIDDLE EAST RESPIRATORY SYNDROME-RELATED CORONAVIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,middle east respiratory syndrome-relatedcoronavirus ,"Wang, N., McLellan, J.S.",2.1,X-RAY DIFFRACTION,0.228,0.191,False,True,IGHV1,IGKV2,Kappa,,,,,,6c6z_H_L_B,False
6okm,H,L,0,R,protein,,tumor necrosis factor receptor superfamily member 4,IMMUNE SYSTEM,04/14/19,Human OX40R (TNFRSF4) bound to Fab 3C8,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Boenig, G., Ultsch, M.H., Harris, S.F.",2.1,X-RAY DIFFRACTION,0.238,0.211,False,True,IGHV1,IGKV1,Kappa,,,,,,6okm_H_L_R,False
4uv7,H,L,0,A,protein,,epidermal growth factor receptor,,08/05/14,The complex structure of extracellular doamin of EGFR and GC1118A,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Yoo, J.H., Cho, H.S.",2.1,X-RAY DIFFRACTION,0.24759,0.20199,False,True,IGHV3,IGKV2,Kappa,,,,,,4uv7_H_L_A,False
1sy6,H,L,0,A,protein,,t-cell surface glycoprotein cd3 gamma/epsilonchain ,signaling protein/antibiotic,03/31/04,Crystal Structure of CD3gammaepsilon Heterodimer in Complex with OKT3 Fab Fragment,MUS MUSCULUS; HOMO SAPIENS,mus musculus,mus musculus,homo sapiens,"Kjer-Nielsen, L., Dunstone, M.A., Kostenko, L., Ely, L.K., Beddoe, T., Misfud, N.A., Purcell, A.W., Brooks, A.G., McCluskey, J., Rossjohn, J.",2.1,X-RAY DIFFRACTION,0.255,0.211,False,True,IGHV1,IGKV4,Kappa,2.73e-06,-7.59,SPR,25.0,15136729,1sy6_H_L_A,False
3so3,C,B,0,A,protein,,suppressor of tumorigenicity 14 protein,HYDROLASE,06/29/11,Structures of Fab-Protease Complexes Reveal a Highly Specific Non-Canonical Mechanism of Inhibition.,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Schneider, E.L., Farady, C.J., Egea, P.F., Goetz, D.H., Baharuddin, A., Craik, C.S.",2.1,X-RAY DIFFRACTION,0.194,0.161,False,True,IGHV3,IGKV3,Kappa,,,,,,3so3_C_B_A,False
7l7r,B,A,0,G,protein,,glycoprotein c,VIRAL PROTEIN,12/30/20,CCHFV Gc prefusion monomer bound to ADI-36121 and ADI-37801 Fabs,HOMO SAPIENS; CRIMEAN-CONGO HEMORRHAGIC FEVER VIRUS (STRAIN NIGERIA/IBAR10200/1970),homo sapiens,homo sapiens,crimean-congo hemorrhagic fever virus (strainnigeria/ibar10200/1970) ,"Mishra, A.K., McLellan, J.S.",2.1,X-RAY DIFFRACTION,0.244,0.219,False,True,IGHV3,IGKV1,Kappa,,,,,,7l7r_B_A_G,False
7xrz,H,L,0,X,protein,,soluble cytochrome b562,IMMUNE SYSTEM,05/10/23,Crystal structure of BRIL and SRP2070_Fab complex,Escherichia coli; Mus musculus,mus musculus,mus musculus,escherichia coli,"Suzuki, M., Miyagi, H., Yasunaga, M., Asada, H., Iwata, S., Saito, J.",2.1,X-RAY DIFFRACTION,0.268,0.214,False,False,IGHV1,IGKV5,Kappa,,,,,,7xrz_H_L_X,False
7x2h,C,D,0,F,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,03/01/23,Crystal structure of SARS-CoV-2 spike receptor-binding domain bound with 6-2C Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Wang, X., Wang, Z.",2.1,X-RAY DIFFRACTION,0.269,0.228,False,True,IGHV3,IGKV1,Kappa,,,,,,7x2h_C_D_F,False
8fax,A,B,0,L,peptide,,spike glycoprotein,IMMUNE SYSTEM/VIRAL PROTEIN,05/03/23,Fab 1249A8-MERS Stem Helix Complex,Homo sapiens; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,middle east respiratory syndrome-relatedcoronavirus ,"Deshpande, A., Schormann, N., Piepenbrink, M.S., Martinez-Sobrido, L., Kobie, J.J., Walter, M.R.",2.1,X-RAY DIFFRACTION,0.240,0.182,False,True,IGHV1,IGKV3,Kappa,,,,,,8fax_A_B_L,False
3x3f,H,L,0,A,protein,,tumor necrosis factor receptor superfamily member 10b,APOPTOSIS/IMMUNE SYSTEM,01/20/15,TRAIL-R2 Extracellular Region Complexed to a Fab fragment from Human Agonist Antibody KMTR2,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Tamada, T.",2.1,X-RAY DIFFRACTION,0.224,0.186,False,True,IGHV1,IGKV3,Kappa,,,,,,3x3f_H_L_A,False
3grw,H,L,0,A,protein,,fibroblast growth factor receptor 3,TRANSFERASE/IMMUNE SYSTEM,03/26/09,FGFR3 in complex with a Fab,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Wiesmann, C.",2.1,X-RAY DIFFRACTION,0.228,0.189,False,True,IGHV3,IGKV1,Kappa,,,,,,3grw_H_L_A,False
7u09,H,L,0,A,peptide,,sars-cov-2 s fusion peptide,VIRAL PROTEIN/IMMUNE SYSTEM,08/03/22,Crystal Structure of C13B8 Fab in complex with SARS-CoV-2 S fusion peptide,mammal environmental sample; SYNTHETIC CONSTRUCT,mammal environmental sample,mammal environmental sample,severe acute respiratory syndrome coronavirus2 ,"Tortorici, M.A., Veesler, D.",2.1,X-RAY DIFFRACTION,0.239,0.190,False,True,IGHV4,IGLV3,Lambda,,,,,,7u09_H_L_A,False
7u0e,A,B,0,D,peptide,,sars-cov-2 s fusion peptide,VIRAL PROTEIN/IMMUNE SYSTEM,08/03/22,Crystal Structure of C13C9 Fab in complex with SARS-CoV-2 S fusion peptide,mammal environmental sample; SYNTHETIC CONSTRUCT,mammal environmental sample,mammal environmental sample,severe acute respiratory syndrome coronavirus2 ,"Tortorici, M.A., Veesler, D.",2.1,X-RAY DIFFRACTION,0.203,0.179,False,True,IGHV1,IGLV3,Lambda,,,,,,7u0e_A_B_D,False
5tzu,H,L,0,C,protein,,leukocyte surface antigen cd47,IMMUNE SYSTEM,11/22/16,Crystal structure of human CD47 ECD bound to Fab of B6H12.2,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Cardoso, R.M.F.",2.1,X-RAY DIFFRACTION,0.213,0.177,False,True,IGHV5,IGKV5,Kappa,,,,,,5tzu_H_L_C,False
1uj3,B,A,0,C,protein,,tissue factor,IMMUNE SYSTEM/BLOOD CLOTTING,07/25/03,Crystal structure of a humanized Fab fragment of anti-tissue-factor antibody in complex with tissue factor,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Ohto, U., Mizutani, R., Nakamura, M., Adachi, H., Satow, Y.",2.1,X-RAY DIFFRACTION,0.227,0.196,False,True,IGHV1,IGKV1D,Kappa,,,,,,1uj3_B_A_C,False
8vui,A,G,0,D,protein,,erythropoietin receptor,IMMUNE SYSTEM,07/10/24,"Structure of FabS1CE-EPR-1, an elbow-locked Fab, in complex with the erythropoeitin receptor",Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Singer, A.U., Bruce, H.A., Blazer, L., Adams, J.J., Sidhu, S.S.",2.1,X-RAY DIFFRACTION,0.240,0.197,False,True,IGHV3,IGKV1,Kappa,,,,,,8vui_A_G_D,False
8xsi,H,L,0,B,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,07/17/24,SARS-CoV-2 RBD + IMCAS-364 (Local Refinement),Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Tong, Z., Cui, Y., Xie, Y., Tong, J., Gao, G.F., Qi, J.",2.1,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8xsi_H_L_B,False
6p8d,A,B,0,C,peptide,,hiv fusion peptide residue 512-519,IMMUNE SYSTEM,06/10/20,Vaccine-elicited murine FP-targeting antibody vFP6.01 in complex with HIV fusion peptide (residue 512-519),MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,human immunodeficiency virus 1,"Xu, K., Liu, K., Wang, Y., Kwong, P.D.",2.102,X-RAY DIFFRACTION,0.309,0.271,False,False,IGHV1,IGKV2,Kappa,,,,,,6p8d_A_B_C,False
7kfv,F,G,0,E,protein,,surface glycoprotein,IMMUNE SYSTEM/Viral protein,10/15/20,Structural basis for a germline-biased antibody response to SARS-CoV-2 (RBD:C1A-B12 Fab),SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Pan, J., Abraham, J., Clark, L., Clark, S.",2.102,X-RAY DIFFRACTION,0.216,0.183,False,True,IGHV3,IGKV1,Kappa,,,,,,7kfv_F_G_E,False
7zoz,H,L,0,A,protein,,sialic acid-binding ig-like lectin 15,IMMUNE SYSTEM,06/28/23,Crystal structure of Siglec-15 in complex with Fab,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Lenza, M.P., Oyenarte, I., Jimenez-Barbero, J., Ereno-Orbea, J.",2.104,X-RAY DIFFRACTION,0.218,0.176,False,True,IGHV1,IGKV14,Kappa,,,,,,7zoz_H_L_A,False
7cjf,A,B,0,C,protein,,spike glycoprotein,VIRAL PROTEIN,07/10/20,Crystal structure of SARS-CoV-2 RBD in complex with a neutralizing antibody Fab,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Guo, Y., Li, X., Zhang, G., Fu, D., Schweizer, L., Zhang, H., Rao, Z.",2.108,X-RAY DIFFRACTION,0.229,0.185,False,True,IGHV3,IGKV1,Kappa,,,,,,7cjf_A_B_C,False
5b71,B,A,0,E,protein,,complement c5 beta chain,IMMUNE SYSTEM,06/03/16,Crystal structure of complement C5 in complex with SKY59,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Irie, M., Shimizu, Y., Sampei, Z., Fukuzawa, T.",2.11,X-RAY DIFFRACTION,0.285,0.246,False,True,unknown,IGKV1,Kappa,1.5200000000000002e-10,-13.394361854051732,SPR,,TBD,5b71_B_A_E,False
4ot1,H,L,0,A,protein,,envelope glycoprotein b,VIRAL PROTEIN/IMMUNE SYSTEM,02/13/14,Structural Basis for the Recognition of Human Cytomegalovirus Glycoprotein B by the Neutralizing Human Antibody SM5-1,HOMO SAPIENS; HUMAN CYTOMEGALOVIRUS,homo sapiens,homo sapiens,human cytomegalovirus,"Diestel, U., Muller, Y.A.",2.11,X-RAY DIFFRACTION,0.231,0.171,False,True,IGHV1,IGLV1,Lambda,,,,,,4ot1_H_L_A,False
6x1v,H,L,0,D,peptide,,aclyana-3-ptza peptide,IMMUNE SYSTEM,05/19/20,Structure of pHis Fab (SC44-8) in complex with pHis mimetic peptide,ORYCTOLAGUS CUNICULUS; SYNTHETIC CONSTRUCT,oryctolagus cuniculus,oryctolagus cuniculus,synthetic construct,"Kalagiri, R., Stanfield, R., Wilson, I.A., Hunter, T.",2.11,X-RAY DIFFRACTION,0.220,0.177,False,True,IGHV1,IGKV1,Kappa,,,,,,6x1v_H_L_D,False
6nms,H,L,0,S,protein,,tyrosine-protein phosphatase non-receptor type substrate 1,IMMUNE SYSTEM,01/11/19,Blocking Fab 136 anti-SIRP-alpha antibody in complex with SIRP-alpha Variant 1,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Wibowo, A.S., Carter, J.J., Sim, J.",2.11,X-RAY DIFFRACTION,0.244,0.204,False,True,IGHV3,IGKV3,Kappa,,,,,,6nms_H_L_S,False
6vbq,A,B,0,I,peptide,,envelope glycoprotein gp160,IMMUNE SYSTEM/Viral Protein,12/19/19,Crystal structure of anti-HIV-1 antibody DH822 bound to gp120 V2 peptide,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Janus, B.M., Ofek, G.",2.116,X-RAY DIFFRACTION,0.211,0.181,False,True,IGHV1,IGLV3,Lambda,,,,,,6vbq_A_B_I,False
5tkj,G,H,0,I,peptide,,hiv-1 fusion peptide residue 512-519,IMMUNE SYSTEM,10/06/16,Structure of vaccine-elicited diverse HIV-1 neutralizing antibody vFP1.01 in complex with HIV-1 fusion peptide residue 512-519,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,human immunodeficiency virus 1,"Xu, K., Liu, K., Kwong, P.D.",2.118,X-RAY DIFFRACTION,0.241,0.198,False,True,IGHV1,IGKV1,Kappa,7.150000000000001e-09,-11.112714836617696,Unknown,,TBD,5tkj_G_H_I,False
4uu9,A,B,0,C,protein,,complement c5,,07/25/14,Crystal structure of the human c5a in complex with MEDI7814 a  neutralising antibody,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Colley, C., Sridharan, S., Dobson, C., Popovic, B., Debreczeni, J.E., Hargreaves, D., Edwards, B., Brennan, J., England, L., Fung, S., An Eghobamien, L., Sivars, U., Woods, R., Flavell, L., Renshaw, G.J., Wickson, K., Wilkinson, T., Davies, R., Bonnell, J., Warrener, P., Howes, R., Vaughan, T.",2.12,X-RAY DIFFRACTION,0.20163,0.17456,False,True,IGHV3,IGLV2,Lambda,1.4e-11,-14.80733067454163,SPR,,TBD,4uu9_A_B_C,False
6bli,J,K,0,L,peptide,,major surface glycoprotein g,VIRAL PROTEIN/IMMUNE SYSTEM,11/10/17,RSV G peptide bound to Fab CB002.5,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,human respiratory syncytial virus a (strainrsb6256) ,"Jones, H.G., McLellan, J.S., Langedijk, J.P.",2.12,X-RAY DIFFRACTION,0.218,0.169,False,True,IGHV4,IGKV1,Kappa,5.200000000000001e-10,-12.665637564550789,Unknown,,TBD,6bli_J_K_L,False
7s13,I,M,0,C,protein,,t-cell surface protein tactile,IMMUNE SYSTEM,08/31/21,Crystal structure of Fab in complex with mouse CD96 dimer,RATTUS; MUS MUSCULUS,rattus,rattus,mus musculus,"Lee, P.S., Barman, I., Strop, P.",2.12,X-RAY DIFFRACTION,0.265,0.217,False,True,IGHV2,IGLV3,Lambda,,,,,,7s13_I_M_C,False
4rwy,H,L,0,A,protein,,hiv-1 yu2 gp120,VIRAL PROTEIN/IMMUNE SYSTEM,12/08/14,Crystal structure of VH1-46 germline-derived CD4-binding site-directed antibody 8ANC131 in complex with HIV-1 clade B YU2 gp120,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Acharya, P., Luongo, T.S., Kwong, P.D.",2.128,X-RAY DIFFRACTION,0.254,0.219,False,True,unknown,IGKV3,Kappa,,,,,,4rwy_H_L_A,False
9dmv,F,G,0,E,protein,,acetylcholine receptor subunit beta,MEMBRANE PROTEIN,04/09/25,Human muscle nAChR with fab9-bound,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Li, H., Hibbs, R.E.",2.13,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV1,Kappa,,,,,,9dmv_F_G_E,False
7ycl,H,L,0,D,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,02/01/23,Crystal structure of SARS-CoV-2 Spike RBD in complex with IS-9A Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Mohapatra, A., Chen, X.",2.13,X-RAY DIFFRACTION,0.218,0.174,False,True,IGHV5,IGKV1,Kappa,,,,,,7ycl_H_L_D,False
8w0w,H,L,0,C,protein,,envelope glycoprotein e2,IMMUNE SYSTEM/VIRAL PROTEIN,03/27/24,Crystal structure of broadly neutralizing antibody hcab64 in complex with Hepatitis C virus envelope glycoprotein E2 ectodomain,Hepacivirus hominis; Homo sapiens,homo sapiens,homo sapiens,hepacivirus hominis,"Flyak, A.I., Wilcox, X.E.",2.13,X-RAY DIFFRACTION,0.224,0.195,False,True,IGHV1,IGKV3,Kappa,,,,,,8w0w_H_L_C,False
7k76,H,L,0,P,peptide,,pfcsp n-terminal peptide p17,IMMUNE SYSTEM,09/22/20,Crystal structure of MAD2-6 IgG Fab in complex with PfCSP N-terminal peptide.,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,plasmodium falciparum,"Pholcharee, T., Wilson, I.A.",2.14,X-RAY DIFFRACTION,0.218,0.184,False,True,IGHV4,IGKV1,Kappa,,,,,,7k76_H_L_P,False
5xcv,A,B,0,C,peptide,,pa14 peptide,IMMUNE SYSTEM,03/23/17,Crystal structure of NZ-1 Fv-clasp fragment with its antigen peptide,RATTUS; HOMO SAPIENS; SYNTHETIC CONSTRUCT,"rattus, homo sapiens","rattus, homo sapiens",homo sapiens,"Arimori, T., Takagi, J.",2.143,X-RAY DIFFRACTION,0.277,0.228,False,True,IGHV5,IGLV3,Lambda,,,,,,5xcv_A_B_C,False
5b8c,B,A,0,C,protein,,programmed cell death protein 1,IMMUNE SYSTEM,06/14/16,High resolution structure of the human PD-1 in complex with pembrolizumab Fv,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Horita, S., Shimamura, T., Iwata, S., Nomura, N.",2.146,X-RAY DIFFRACTION,0.226,0.184,False,True,IGHV1,IGKV3,Kappa,,,,,,5b8c_B_A_C,False
6q0e,H,L,0,A,protein,,hemagglutinin,IMMUNE SYSTEM,08/01/19,Inferred precursor (UCA) of the human antibody lineage 652 in complex with influenza hemagglutinin head domain of A/Beijing/262/95(H1N1),INFLUENZA A VIRUS (A/BEIJING/262/1995(H1N1)); HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus (a/beijing/262/1995(h1n1)),"McCarthy, K.R., Harrison, S.C.",2.15,X-RAY DIFFRACTION,0.249,0.230,False,True,IGHV4,IGLV3,Lambda,,,,,,6q0e_H_L_A,False
6j6y,E,F,0,D,protein,,fibroblast growth factor receptor 4,TRANSFERASE/IMMUNE SYSTEM,01/16/19,FGFR4 D2 - Fab complex,HOMO SAPIENS; SYNTHETIC CONSTRUCT,synthetic construct,synthetic construct,homo sapiens,"Takahashi, M., Hanzawa, H.",2.15,X-RAY DIFFRACTION,0.258,0.193,False,True,IGHV3,IGLV1,Lambda,,,,,,6j6y_E_F_D,False
7sx7,B,C,0,A,protein,,clade a/e 93th057 hiv-1 gp120 core,IMMUNE SYSTEM/VIRAL PROTEIN,11/30/22,Crystal structure of broadly neutralizing antibody N49P9.3-FR3-3 Fab in complex with HIV-1 Clade A/E strain 93TH057 gp120 core,Homo; Homo sapiens; Human immunodeficiency virus 1,homo,homo sapiens,human immunodeficiency virus 1,"Tolbert, W.D., Pazgier, M.",2.15,X-RAY DIFFRACTION,0.266,0.209,False,True,unknown,unknown,unknown,,,,,,7sx7_B_C_A,False
7tow,H,L,0,E,peptide,,spike protein s2,IMMUNE SYSTEM/Viral Protein,01/24/22,Antibody DH1058 Fab fragment bound to SARS-CoV-2 fusion peptide,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Gobeil, S., Acharya, P.",2.15,X-RAY DIFFRACTION,0.234,0.167,False,True,IGHV3,IGKV1,Kappa,,,,,,7tow_H_L_E,False
4bz1,H,L,0,A,protein,,envelope protein,IMMUNE SYSTEM/VIRAL PROTEIN,07/23/13,Structure of dengue virus EDIII in complex with Fab 3e31,DENGUE VIRUS 4; MUS MUSCULUS,mus musculus,mus musculus,dengue virus 4,"Li, J., Watterson, D., Chang, C.W., Li, X.Q., Ericsson, D.J., Qiu, L.W., Cai, J.P., Chen, J., Fry, S.R., Cooper, M.A., Che, X.Y., Young, P.R., Kobe, B.",2.15,X-RAY DIFFRACTION,0.2546,0.2234,False,False,IGHV1,IGKV8,Kappa,,,,,,4bz1_H_L_A,False
3ifo,A,B,0,Q,peptide,,amyloid beta a4 protein,IMMUNE SYSTEM,07/24/09,X-ray structure of amyloid beta peptide:antibody (Abeta1-7:10D5) complex,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Weis, W.I., Feinberg, H., Basi, G.S., Schenk, D.",2.15,X-RAY DIFFRACTION,0.218,0.162,False,True,IGHV8,IGKV1,Kappa,5.45e-08,-9.9,SPR,25.0,19923222,3ifo_A_B_Q,False
5te7,H,L,0,G,protein,,hiv-1 gp120 core,IMMUNE SYSTEM,09/20/16,Crystal Structure of Broadly Neutralizing VRC01-class Antibody N6 in complex with HIV-1 Clade C strain DU172.17 core gp120,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Zhou, T., Kwong, P.D.",2.15,X-RAY DIFFRACTION,0.228,0.190,False,True,unknown,unknown,unknown,2.81e-09,-11.666051859880756,SPR,,TBD,5te7_H_L_G,False
5bk1,C,D,0,B,protein,,maltose binding protein,SUGAR BINDING PROTEIN,09/12/17,Crystal structure of maltose binding protein in complex with an endosteric synthetic antibody,HOMO SAPIENS; ESCHERICHIA COLI,homo sapiens,homo sapiens,escherichia coli,"Mukherjee, S., Kossiakoff, A.A.",2.15,X-RAY DIFFRACTION,0.253,0.205,False,True,IGHV3,IGKV1,Kappa,1.1e-09,-12.22172707862036,SPR,,TBD,5bk1_C_D_B,False
7rxi,H,L,0,A,protein,,circumsporozoite protein,IMMUNE SYSTEM,08/23/21,Fab234 in complex with the C-terminal alpha-TSR domain of P. falciparum,HOMO SAPIENS; PLASMODIUM FALCIPARUM (ISOLATE 3D7),homo sapiens,homo sapiens,plasmodium falciparum (isolate 3d7),"Pholcharee, T., Oyen, D., Wilson, I.A.",2.15,X-RAY DIFFRACTION,0.265,0.219,False,True,IGHV3,IGLV3,Lambda,,,,,,7rxi_H_L_A,False
7seg,A,B,0,D,protein,,low affinity immunoglobulin gamma fc region receptor iii-a,ANTITUMOR PROTEIN,09/30/21,Crystal structure of the complex of CD16A bound by an anti-CD16A Fab,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Kiefer, J.R., Wallweber, H.A., Polson, A.G.",2.156,X-RAY DIFFRACTION,0.234,0.189,False,True,IGHV1,IGLV3,Lambda,,,,,,7seg_A_B_D,False
7kmg,A,B,0,C,protein,,spike protein s1,IMMUNE SYSTEM/VIRAL PROTEIN,11/02/20,LY-CoV555 neutralizing antibody against SARS-CoV-2,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Hendle, J., Pustilnik, A., Sauder, J.M., Coleman, K.A., Boyles, J.S., Dickinson, C.D.",2.16,X-RAY DIFFRACTION,0.257,0.209,False,True,IGHV1,IGKV1,Kappa,,,,,,7kmg_A_B_C,False
5ies,H,L,0,C,protein,,germline-targeting hiv-1 gp120 engineered outer domain eod-gt8 ,IMMUNE SYSTEM/ VIRAL PROTEIN,02/25/16,Crystal structure of VRC01c-HuGL2 Fab from an HIV-1 naive donor in complex with with a germline-targeting gp120 engineered outer domain eOD-GT8 at 2.16 A,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Sarkar, A., Wilson, I.A.",2.16,X-RAY DIFFRACTION,0.214,0.189,False,True,IGHV1,IGKV4,Kappa,3.68e-07,-8.77775408374075,SPR,,TBD,5ies_H_L_C,False
8b9v,H,L,0,A,peptide,,alpha-synuclein 110-120,PROTEIN BINDING,10/25/23,Crystal structure of Lu AF82422 in complex with alpha-synuclein 110-120,Homo sapiens; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,homo sapiens,"Bjerregaard-Andersen, K., Carr, K., Krogh, B.O., Kallunki, P., Tagmose, L., David, L.",2.16,X-RAY DIFFRACTION,0.253,0.197,False,True,IGHV3,IGKV3,Kappa,,,,,,8b9v_H_L_A,False
8xsf,H,L,0,B,protein,,spike protein s1,VIRAL PROTEIN/HYDROLASE/IMMUNE SYSTEM,07/17/24,SARS-CoV-2 RBD + IMCAS-364 + hACE2,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Tong, Z., Cui, Y., Xie, Y., Tong, J., Gao, G.F., Qi, J.",2.16,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8xsf_H_L_B,False
7sts,H,L,0,C,protein,,nucleoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,08/10/22,Crystal Structure of Human Fab S24-1379 in the Complex with the N-teminal Domain of Nucleocapsid Protein from SARS CoV-2,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Kim, Y., Maltseva, N., Tesar, C., Jedrzejczak, R., Dugan, H., Stamper, C., Wilson, P., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)",2.16,X-RAY DIFFRACTION,0.209,0.190,False,True,IGHV4,IGLV1,Lambda,,,,,,7sts_H_L_C,False
9osr,K,R,0,D,protein,,neuraminidase,VIRAL PROTEIN/IMMUNE SYSTEM,10/01/25,Structure of Fab HB420 in complex with influenza H3N2 A/Moscow/10/1999 neuraminidase,Homo sapiens; Influenza A virus,homo sapiens,homo sapiens,influenza a virus,"Lv, H., Wu, N.C.",2.16,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV2,Lambda,,,,,,9osr_K_R_D,False
5u3l,H,L,0,P,peptide,,gp41 mper peptide,IMMUNE SYSTEM/VIRAL PROTEIN,12/02/16,Crystal Structure of DH511.2 Fab in Complex with HIV-1 gp41 MPER 670-683 Peptide,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Ofek, G., Wu, L., Lougheed, C.S., Williams, L.D., Nicely, N.I., Haynes, B.F.",2.165,X-RAY DIFFRACTION,0.231,0.205,False,True,IGHV3,IGKV1,Kappa,,,,,,5u3l_H_L_P,False
7txw,H,L,0,A,protein,,ookinete surface protein p25,IMMUNE SYSTEM,04/12/23,Crystal structure of the complex of the malaria sexual stage protein and vaccine target Pfs25 with the Fab fragment of a transmission blocking antibody 1G2,Mus musculus; Plasmodium falciparum 3D7,mus musculus,mus musculus,plasmodium falciparum 3d7,"Singh, K., Gittis, A.G., Garboczi, D.N.",2.17,X-RAY DIFFRACTION,0.230,0.177,False,True,IGHV1,IGKV1,Kappa,,,,,,7txw_H_L_A,False
6wio,A,B,0,C,protein,,interleukin-17a,CYTOKINE/IMMUNE SYSTEM,04/10/20,Fab antigen complex,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Antonysamy, S.",2.17,X-RAY DIFFRACTION,0.227,0.208,False,True,IGHV3,IGKV3,Kappa,,,,,,6wio_A_B_C,False
8zu9,B,A,0,E,protein,,entry-fusion complex associated protein opg095,ANTIVIRAL PROTEIN/IMMUNE SYSTEM,04/02/25,The complex structure of MPXV M1R and neutralizing antibody A129,Homo sapiens; Monkeypox virus,homo sapiens,homo sapiens,monkeypox virus,"Ge, J.W.",2.17,X-RAY DIFFRACTION,0.262,0.211,False,True,IGHV3,IGKV1,Kappa,,,,,,8zu9_B_A_E,False
3bn9,F,E,0,A,protein,,membrane-type serine protease 1,HYDROLASE,12/13/07,Crystal Structure of MT-SP1 in complex with Fab Inhibitor E2,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Farady, C.J., Schneider, E.L., Egea, P.F., Goetz, D.H., Craik, C.S.",2.173,X-RAY DIFFRACTION,0.267,0.223,False,True,IGHV3,IGKV1,Kappa,,,,,,3bn9_F_E_A,True
7unb,H,L,0,R,protein,,gametocyte surface protein p45/48,IMMUNE SYSTEM,08/10/22,Crystal structure of malaria transmission-blocking antigen Pfs48/45-6C variant in complex with human antibodies RUPA-117 and RUPA-47,Homo sapiens; Plasmodium falciparum,homo sapiens,homo sapiens,plasmodium falciparum,"Hailemariam, S., McLeod, B., Julien, J.-P.",2.18,X-RAY DIFFRACTION,0.228,0.178,False,True,IGHV1,IGKV3,Kappa,,,,,,7unb_H_L_R,False
9jmb,H,L,0,A,protein,,glycoprotein b,VIRAL PROTEIN/IMMUNE SYSTEM,09/24/25,Cryo-EM structure of HSV-2 gB and FAB 16F9 complex,Human herpesvirus 2; Mus musculus,mus musculus,mus musculus,human herpesvirus 2,"Li, Y., Zheng, Q., Li, S.",2.18,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV4,Kappa,,,,,,9jmb_H_L_A,False
7wnb,H,L,0,R,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,04/19/23,Crystal structure of SARS-CoV-2 spike receptor-binding domain (RBD) in complex with NCV2SG48 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Yamamoto, A., Higashiura, A.",2.18,X-RAY DIFFRACTION,0.281,0.245,False,True,IGHV3,IGKV1,Kappa,,,,,,7wnb_H_L_R,False
7unb,F,E,0,R,protein,,gametocyte surface protein p45/48,IMMUNE SYSTEM,08/10/22,Crystal structure of malaria transmission-blocking antigen Pfs48/45-6C variant in complex with human antibodies RUPA-117 and RUPA-47,Homo sapiens; Plasmodium falciparum,homo sapiens,homo sapiens,plasmodium falciparum,"Hailemariam, S., McLeod, B., Julien, J.-P.",2.18,X-RAY DIFFRACTION,0.228,0.178,False,True,IGHV4,IGKV1,Kappa,,,,,,7unb_F_E_R,False
8tuz,H,L,0,A,protein,,outer surface protein a,IMMUNE SYSTEM,08/28/24,Fab 857-2 in complex with OspA,Borreliella burgdorferi; Homo sapiens,homo sapiens,homo sapiens,borreliella burgdorferi,"Rudolph, M.J., Mantis, N.",2.186,X-RAY DIFFRACTION,0.239,0.177,False,True,IGHV5,IGKV1,Kappa,,,,,,8tuz_H_L_A,False
3l95,B,A,0,X,protein,,neurogenic locus notch homolog protein 1,IMMUNE SYSTEM,01/04/10,Crystal structure of the human Notch1 Negative Regulatory Region (NRR) bound to the fab fragment of an antagonist antibody,HOMO SAPIENS; SYNTHETIC CONSTRUCT,,,homo sapiens,"Hymowitz, S.G., de Leon, G.P.",2.19,X-RAY DIFFRACTION,0.271,0.222,False,True,IGHV3,IGKV1,Kappa,2.5e-09,-11.73,SPR,25.0,20393564,3l95_B_A_X,False
7wg3,E,A,0,I,protein,,il17rb protein,IMMUNE SYSTEM,11/09/22,Structural basis of interleukin-17B receptor in complex with a neutralizing antibody D9 for guiding humanization and affinity maturation for cancer therapy,Bos taurus; Mus musculus,mus musculus,mus musculus,bos taurus,"Lee, W.H., Chen, X.R., Liu, I.J., Lee, J.H., Hu, C.M., Wu, H.C., Wang, S.K., Lee, W.H., Ma, C.",2.19,X-RAY DIFFRACTION,0.238,0.193,False,True,IGHV1,IGKV4,Kappa,,,,,,7wg3_E_A_I,False
3o2d,H,L,0,A,protein,,t-cell surface glycoprotein cd4,IMMUNE SYSTEM,07/22/10,Crystal structure of HIV-1 primary receptor CD4 in complex with a potent antiviral antibody,MUS MUSCULUS; HOMO SAPIENS,mus musculus,mus musculus,homo sapiens,"Freeman, M.M., Seaman, M.S., Rits-Volloch, S., Hong, X., Ho, D.D., Chen, B.",2.19,X-RAY DIFFRACTION,0.224,0.192,False,True,IGHV1,IGKV4,Kappa,,,,,,3o2d_H_L_A,False
6bit,J,L,0,G,protein,,tyrosine-protein phosphatase non-receptor type substrate 1,IMMUNE SYSTEM,11/03/17,SIRPalpha antibody complex,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Ring, N.G., Herndler-Brandstetter, D., Weiskopf, K., Shan, L., Volkmer, J.P., George, B.M., Lietzenmayer, M., McKenna, K.M., Naik, T.J., McCarty, A., Zheng, Y., Ring, A.M., Flavell, R.A., Weissman, I.L.",2.191,X-RAY DIFFRACTION,0.240,0.210,False,False,IGHV14,IGKV4,Kappa,2.6e-09,-11.712071867460317,SPR,,TBD,6bit_J_L_G,False
5o14,H,L,0,A,protein,,factor h binding protein variant 1.1,IMMUNE SYSTEM,05/18/17,Co-crystal structure of a cross-reactive bactericidal human antibody targeting meningococcal vaccine antigen factor H binding protein,NEISSERIA MENINGITIDIS SEROGROUP B (STRAIN MC58); HOMO SAPIENS,homo sapiens,homo sapiens,neisseria meningitidis serogroup b (strainmc58) ,"Lopez-Sagaseta, J.",2.195,X-RAY DIFFRACTION,0.250,0.192,False,True,IGHV5,IGKV1,Kappa,,,,,,5o14_H_L_A,False
8r1c,F,G,0,C,protein,,"spike glycoprotein,fibritin",VIRAL PROTEIN,03/13/24,SD1-2 Fab in complex with SARS-CoV-2 BA.2.12.1 Spike Glycoprotein,Enterobacteria phage T4; Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,"severe acute respiratory syndrome coronavirus2, enterobacteria phage t4 ","Duyvesteyn, H.M.E., Ren, J., Stuart, D.I.",2.2,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGLV2,Lambda,,,,,,8r1c_F_G_C,False
3kr3,H,L,0,D,protein,,insulin-like growth factor ii,IMMUNE SYSTEM,11/17/09,Crystal structure of IGF-II antibody complex,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Peat, T.S., Newman, J., Adams, T.E.",2.2,X-RAY DIFFRACTION,0.251,0.199,False,True,IGHV3,IGKV1,Kappa,4.9e-11,-14.06,SPR,25.0,20515953,3kr3_H_L_D,False
6cxy,H,L,0,C,protein,,cadherin-1,CELL ADHESION,04/04/18,Crystal Structure of Human E-cadherin bound by mouse monoclonal antibody Fab mAb-1_19A11,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,Seattle Structural Genomics Center for Infectious Disease (SSGCID),2.2,X-RAY DIFFRACTION,0.197,0.163,False,True,IGHV2,IGKV8,Kappa,,,,,,6cxy_H_L_C,False
7s4g,A,B,0,K,peptide,,lymphocyte antigen 6 complex locus protein g6d,SIGNALING PROTEIN,09/08/21,Fab fragment bound to the Cter peptide of Ly6G6D,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Rouge, L., Lupardus, P.",2.2,X-RAY DIFFRACTION,0.235,0.192,False,True,IGHV1,IGKV4,Kappa,,,,,,7s4g_A_B_K,False
7vyr,H,L,0,R,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,11/15/21,Crystal structure of SARS-CoV-2 Spike RBD in complex with the D27 neutralizing antibody Fab fragment,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Jeong, B.-S., Oh, B.-H.",2.2,X-RAY DIFFRACTION,0.235,0.192,False,True,IGHV1,IGLV3,Lambda,,,,,,7vyr_H_L_R,False
2hrp,H,L,0,P,peptide,,hiv-1 protease peptide,COMPLEX (IMMUNOGLOBULIN/PEPTIDE),12/27/96,ANTIGEN-ANTIBODY COMPLEX,MUS MUSCULUS,mus musculus,mus musculus,,"Lescar, J., Bentley, G.A.",2.2,X-RAY DIFFRACTION,0.289,0.198,False,False,IGHV5,IGKV3,Kappa,5e-09,-11.32,SPR,,9150407,2hrp_H_L_P,False
7zxk,H,L,0,C,protein,,interleukin-27 subunit alpha,CYTOKINE,11/02/22,Human IL-27 in complex with neutralizing SRF388 FAb fragment,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Bloch, Y., Skladanowska, K., Strand, J., Welin, M., Logan, D., Hill, J., Savvides, S.N.",2.2,X-RAY DIFFRACTION,0.221,0.184,False,True,IGHV3,IGKV4,Kappa,,,,,,7zxk_H_L_C,False
3iet,D,C,0,Q,peptide,,podoplanin,IMMUNE SYSTEM,07/23/09,Crystal Structure of 237mAb with antigen,MUS MUSCULUS,mus musculus,mus musculus,mus musculus,"Brooks, C.L., Evans, S.V., Borisova, S.N.",2.2,X-RAY DIFFRACTION,0.271,0.227,False,True,IGHV6,IGKV1,Kappa,1.4e-07,-9.350354316900614,Unknown,,TBD,3iet_D_C_Q,False
7uzc,E,F,0,B,protein,,spike protein s1,IMMUNE SYSTEM/VIRAL PROTEIN,01/11/23,"Structure of the SARS-CoV-2 RBD in complex with the mouse antibody Fab fragment, M8a-34",Mus musculus; Severe acute respiratory syndrome coronavirus 2,mus musculus,mus musculus,severe acute respiratory syndrome coronavirus2 ,"Fan, C., Bjorkman, P.J.",2.2,X-RAY DIFFRACTION,0.243,0.172,False,True,IGHV1,IGKV3,Kappa,,,,,,7uzc_E_F_B,False
4cni,H,L,0,C,protein,,interleukin-6,,01/22/14,Crystal structure of the Fab portion of Olokizumab in complex with IL- 6,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Shaw, S., Bourne, T., Meier, C., Carrington, B., Gelinas, R., Henry, A., Popplewell, A., Adams, R., Baker, T., Rapecki, S., Marshall, D., Neale, H., Lawson, A.",2.2,X-RAY DIFFRACTION,0.21549,0.17608,False,True,IGHV3,IGKV1,Kappa,1e-11,-15.006684983512798,SPR,,TBD,4cni_H_L_C,False
8hes,H,L,0,C,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,11/08/23,Crystal structure of SARS-CoV-2 RBD and NIV-10 complex,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Moriyama, S., Anraku, Y., Taminishi, S., Adachi, Y., Kuroda, D., Higuchi, Y., Kotaki, R., Tonouchi, K., Yumoto, K., Suzuki, T., Kita, S., Someya, T., Fukuhara, H., Kuroda, Y., Yamamoto, T., Onodera, T., Fukushi, S., Maeda, K., Nakamura-Uchiyama, F., Hashiguchi, T., Hoshino, A., Maenaka, K., Takahashi, Y.",2.2,X-RAY DIFFRACTION,0.241,0.196,False,True,IGHV3,IGLV2,Lambda,,,,,,8hes_H_L_C,False
6rlo,A,B,0,I,protein,,cd9 antigen,IMMUNE SYSTEM,05/02/19,Crystal structure of AT1412dm Fab fragment in complex with CD9 large extracellular loop,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Neviani, V., Pearce, N.M., Pos, W., Schotte, R., Spits, H., Gros, P.",2.2,X-RAY DIFFRACTION,0.287,0.254,False,True,IGHV3,IGKV4,Kappa,,,,,,6rlo_A_B_I,False
2ck0,H,L,0,P,peptide,,protein (11-mer; cyclic peptide),IMMUNOGLOBULIN,06/13/99,"ANTI-ANTI-IDIOTYPIC ANTIBODY AGAINST HUMAN ANGIOTENSIN II, COMPLEX WITH A SYNTHETIC CYCLIC PEPTIDE",MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,synthetic construct,"Pan, Y.H., Amzel, L.M.",2.2,X-RAY DIFFRACTION,0.296,0.200,False,False,IGHV10,IGKV8,Kappa,,,,,,2ck0_H_L_P,False
5tbd,E,F,0,I,peptide,,merozoite surface protein 2,IMMUNE SYSTEM,09/12/16,Crystal Structure of anti-MSP2 Fv fragment (mAb4D11) in complex with 3D7-MSP2 215-222,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,plasmodium falciparum 3d7,"Seow, J., Morales, R.A.V., MacRaild, C.A., Bankala, K., Drinkwater, N., Dingjan, T., Jaipuria, G., Wilde, K., Anders, R.F., Atreya, H.S., Christ, D., McGowan, S., Norton, R.S.",2.2,X-RAY DIFFRACTION,0.247,0.207,False,True,IGHV14,IGKV1,Kappa,,,,,,5tbd_E_F_I,False
7xsa,H,I,0,J,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,05/10/23,Crystal structure of SARS-CoV-2 spike receptor binding domain bound with P2S-2E9 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Wang, X., Wang, Z.",2.2,X-RAY DIFFRACTION,0.283,0.231,False,True,IGHV2,IGLV2,Lambda,,,,,,7xsa_H_I_J,False
6bzw,C,D,0,I,peptide,,e2 as412 peptide,IMMUNE SYSTEM,12/26/17,Structure of the Hepatitis C virus envelope glycoprotein E2 antigenic region 412-423 bound to the GL precursor of the broadly neutralizing antibody AP33,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,hepatitis c virus,"Tzarum, N., Alemn, F., Wilson, I.A., Law, M.",2.2,X-RAY DIFFRACTION,0.231,0.192,False,True,IGHV3,IGKV3,Kappa,,,,,,6bzw_C_D_I,False
8bsf,H,L,0,A,protein,,spike protein s1,VIRAL PROTEIN,05/17/23,CRYSTAL STRUCTURE OF SARS-COV-2 RECEPTOR BINDING DOMAIN (RBD-beta variant) in complex with 3D2 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Welin, M., Kimbung, Y.R., Focht, D., Pisitkun, T.",2.2,X-RAY DIFFRACTION,0.229,0.196,False,True,IGHV5,IGLV1,Lambda,,,,,,8bsf_H_L_A,False
7st5,h,l,0,F,protein,,tyrosine-protein phosphatase non-receptor type substrate 1,IMMUNE SYSTEM,05/17/23,Structure of Fab CC-95251 in complex with SIRP-alpha,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Fenalti, G.",2.2,X-RAY DIFFRACTION,0.280,0.245,False,False,IGHV1,IGKV1,Kappa,,,,,,7st5_h_l_F,False
3qnz,B,A,0,C,peptide,,peptide from tubulin beta chain,IMMUNE SYSTEM,02/09/11,Orthorhombic form of IgG1 Fab fragment (in complex with antigenic tubulin peptide) sharing same Fv as IgA,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,,"Trajtenberg, F., Correa, A., Buschiazzo, A.",2.2,X-RAY DIFFRACTION,0.235,0.196,False,False,IGHV3,IGKV2,Kappa,,,,,,3qnz_B_A_C,False
8g3v,D,O,0,J,protein,,neuraminidase,VIRAL PROTEIN/IMMUNE SYSTEM,05/31/23,N2 neuraminidase of A/Hong_Kong/2671/2019 in complex with 4 FNI19 Fab molecules,Homo sapiens; Influenza A virus,homo sapiens,homo sapiens,influenza a virus,"Dang, H.V., Snell, G.",2.2,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,8g3v_D_O_J,False
5dlm,H,L,0,X,peptide,,matrix protein 2,IMMUNE SYSTEM,09/07/15,Complex of Influenza M2e and Antibody,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,influenza a virus,"Cho, K.J., Schepens, B., Moonens, K., Deng, L., Fiers, W., Remaut, H., Saelens, X.",2.2,X-RAY DIFFRACTION,0.240,0.187,False,False,IGHV5,IGKV1,Kappa,,,,,,5dlm_H_L_X,False
7lxy,N,O,0,J,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,03/05/21,SARS-CoV-2 S/S2M11/S2X333 Global Refinement,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"McCallum, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)",2.2,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV3,Lambda,,,,,,7lxy_N_O_J,False
7sem,B,C,0,F,protein,,fusion glycoprotein f0,VIRAL PROTEIN/Immune System,09/30/21,Structure-based design of prefusion-stabilized human metapneumovirus fusion proteins,HOMO SAPIENS; HUMAN METAPNEUMOVIRUS,homo sapiens,homo sapiens,human metapneumovirus,"Rush, S.A., Hsieh, C.-L., McLellan, J.S.",2.2,X-RAY DIFFRACTION,0.239,0.217,False,True,IGHV3,IGLV1,Lambda,,,,,,7sem_B_C_F,False
6hig,H,L,0,B,protein,,programmed cell death protein 1,IMMUNE SYSTEM,08/29/18,hPD-1/NBO1a Fab complex,MUS MUSCULUS; HOMO SAPIENS,mus musculus,mus musculus,homo sapiens,"Loredo-Varela, J.L., Fenwick, C., Pantaleo, G., Weissenhorn, W.",2.2,X-RAY DIFFRACTION,0.270,0.215,False,True,IGHV7,IGKV1,Kappa,,,,,,6hig_H_L_B,False
4qhu,H,L,0,C,protein,,interleukin-17a,IMMUNE SYSTEM,05/29/14,Crystal Structure of IL-17A/Fab6785 complex,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Luo, J., Gilliland, G.L., Malia, T., Obmolova, G., Teplyakov, A.",2.2,X-RAY DIFFRACTION,0.216,0.171,False,True,IGHV3,IGLV3,Lambda,,,,,,4qhu_H_L_C,False
6kva,h,l,0,b,peptide,,unknown,IMMUNE SYSTEM,09/03/19,Structure of anti-hCXCR2 abN48-2 in complex with its CXCR2 epitope,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,homo sapiens,"Xiang, J.C., Yan, L., Yang, B., Wilson, I.A.",2.2,X-RAY DIFFRACTION,0.235,0.194,False,False,IGHV1,IGLV5,Lambda,,,,,,6kva_h_l_b,False
6obd,H,L,0,F,peptide,,gld52 peptide mimetic,IMMUNE SYSTEM,03/20/19,Crystal structure of anti-GLD52 Fab complex with human GLD52 peptide mimetic,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Wei, R.",2.2,X-RAY DIFFRACTION,0.307,0.234,False,True,IGHV3,IGKV1,Kappa,,,,,,6obd_H_L_F,False
2b2x,I,M,0,B,protein,,integrin alpha-1,Immune system,09/19/05,VLA1 RdeltaH I-domain complexed with a quadruple mutant of the AQC2 Fab,RATTUS NORVEGICUS; MUS MUSCULUS,mus musculus,mus musculus,rattus norvegicus,"Clark, L.A., Boriack-Sjodin, P.A., Eldredge, J., Fitch, C., Friedman, B., Hanf, K.J., Jarpe, M., Liparoto, S.F., Li, Y., Lugovskoy, A.",2.2,X-RAY DIFFRACTION,0.272,0.238,False,True,IGHV5,IGKV4,Kappa,1.72e-09,-11.95,Other,,16597831,2b2x_I_M_B,True
6b08,C,B,0,A,protein,,pfs25,IMMUNE SYSTEM,09/14/17,Crystal structure of Pfs25 in complex with the transmission blocking antibody 1276,HOMO SAPIENS; PLASMODIUM FALCIPARUM,homo sapiens,homo sapiens,plasmodium falciparum,"Scally, S.W., McLeod, B., Bosch, A., King, C.R., Julien, J.P.",2.2,X-RAY DIFFRACTION,0.233,0.191,False,True,IGHV1,IGLV3,Lambda,1.6e-08,-10.635483235413163,BLI,,TBD,6b08_C_B_A,False
1nl0,H,L,0,G,peptide,,factor ix,IMMUNE SYSTEM,01/06/03,"Crystal structure of human factor IX Gla domain in complex of an inhibitory antibody, 10C12",HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,,"Huang, M., Furie, B.C., Furie, B.",2.2,X-RAY DIFFRACTION,0.270,0.233,False,True,IGHV3,IGLV1,Lambda,1.6000000000000003e-09,-11.99972732482342,Unknown,,TBD,1nl0_H_L_G,False
8j7t,E,C,0,A,protein,,zinc transporter 7,METAL TRANSPORT,09/20/23,"Cryo-EM structure of hZnT7-Fab complex in zinc-unbound state, determined in outward-facing conformation",Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Han, B.B., Inaba, K., Watanabe, S.",2.2,ELECTRON MICROSCOPY,,,False,True,IGHV2,IGKV3,Kappa,,,,,,8j7t_E_C_A,False
3s35,H,L,0,X,protein,,vascular endothelial growth factor receptor 2,IMMUNE SYSTEM/Transferase,05/17/11,Structural basis for the function of two anti-VEGF receptor antibodies,"MUS MUSCULUS, HOMO SAPIENS; HOMO SAPIENS","mus musculus, homo sapiens","mus musculus, homo sapiens",homo sapiens,"Franklin, M.C.",2.2,X-RAY DIFFRACTION,0.259,0.203,False,True,IGHV1,IGKV3,Kappa,,,,,,3s35_H_L_X,False
6m3b,C,B,0,A,protein,,vitamin k-dependent protein c heavy chain,BLOOD CLOTTING/IMMUNE SYSTEM,03/03/20,hAPC-c25k23 Fab complex,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Wang, X., Li, L., Zhao, X., Egner, U.",2.2,X-RAY DIFFRACTION,0.248,0.218,False,True,IGHV3,IGLV1,Lambda,,,,,,6m3b_C_B_A,False
5xcs,A,B,0,C,peptide,,ha peptide,IMMUNE SYSTEM,03/23/17,Crystal structure of 12CA5 Fv-clasp fragment with its antigen peptide,MUS MUSCULUS; HOMO SAPIENS; SYNTHETIC CONSTRUCT,"mus musculus, homo sapiens","mus musculus, homo sapiens",homo sapiens,"Arimori, T., Takagi, J.",2.2,X-RAY DIFFRACTION,0.244,0.208,False,True,IGHV5,IGKV8,Kappa,,,,,,5xcs_A_B_C,False
8r4n,H,L,0,N,protein,,short neurotoxin 1,ANTITOXIN,05/28/25,Crystal structure of neutralizing Fab Eq4.Dp46-3A from equine antivenom bound to short chain three finger alpha-neurotoxin from Dendroaspis polylepis.,Dendroaspis polylepis; Equus caballus,equus caballus,equus caballus,dendroaspis polylepis,"Wibmer, C.K.",2.2,X-RAY DIFFRACTION,0.228,0.206,False,True,unknown,unknown,unknown,,,,,,8r4n_H_L_N,False
3wkm,I,M,0,B,protein,,putative zinc metalloprotease aq_1964,HYDROLASE,10/28/13,The periplasmic PDZ tandem fragment of the RseP homologue from Aquifex aeolicus in complex with the Fab fragment,AQUIFEX AEOLICUS; MUS MUSCULUS,mus musculus,mus musculus,aquifex aeolicus,"Nogi, T., Tabata, S., Tamura-kawakami, K., Takagi, J.",2.2,X-RAY DIFFRACTION,0.272,0.224,False,False,IGHV14,IGKV3,Kappa,,,,,,3wkm_I_M_B,False
8s73,C,D,0,N,peptide,,bis-tn glycopeptide,IMMUNE SYSTEM,06/25/25,Crystal structure of Fab-antiCD43 monoclonal antibody complexed to a bis-Tn glycopeptide,Mus musculus; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Hurtado-Guerrero, R., Macias-Leon, J.",2.2,X-RAY DIFFRACTION,0.237,0.195,False,True,IGHV1,IGKV12,Kappa,,,,,,8s73_C_D_N,False
9mxi,E,F,0,G,protein,,heat-labile enterotoxin b chain,IMMUNE SYSTEM/TOXIN,02/12/25,"Crystal Structure of synthetic antibody, COP-2, in complex with the C-terminal domain of Clostridium perfringens Enterotoxin",Clostridium perfringens; synthetic construct,synthetic construct,synthetic construct,clostridium perfringens,"Ogbu, C.P., Kapoor, S., Vecchio, A.J.",2.2,X-RAY DIFFRACTION,0.233,0.182,False,True,IGHV3,IGKV1,Kappa,,,,,,9mxi_E_F_G,False
2r0l,H,L,0,A,protein,,hepatocyte growth factor activator,"HYDROLASE, IMMUNE SYSTEM",08/20/07,Short Form HGFA with Inhibitory Fab75,"HOMO SAPIENS; HOMO SAPIENS, SYNTHETIC CONSTRUCT; SYNTHETIC CONSTRUCT",,,homo sapiens,"Eigenbrot, C., Shia, S.",2.2,X-RAY DIFFRACTION,0.248,0.193,False,True,IGHV3,IGKV1,Kappa,1.46e-08,-10.68,SPR,25.0,18077410,2r0l_H_L_A,False
9mqv,H,L,0,A,protein,,neuraminidase,"VIRAL PROTEIN, HYDROLASE/IMMUNE SYSTEM",07/23/25,Crystal structure of human 1122A11 Fab in complex with influenza virus neuraminidase from A/Singapore/INFIMH-16-0019/2016 (H3N2),Homo sapiens; Influenza A virus,homo sapiens,homo sapiens,influenza a virus,"Zhu, X., Wilson, I.A.",2.2,X-RAY DIFFRACTION,0.204,0.169,False,True,IGHV1,IGLV3,Lambda,,,,,,9mqv_H_L_A,False
8sgn,H,L,0,G,protein,,envelope glycoprotein gp350,VIRAL PROTEIN/IMMUNE SYSTEM,04/17/24,"Crystal structure of Epstein-Barr virus glycoprotein 350 (gp350) in complex with Cy651H02, a monoclonal antibody isolated from macaques immunized with a gp350 nanoparticle vaccine",Human herpesvirus 4; Macaca fascicularis,macaca fascicularis,macaca fascicularis,human herpesvirus 4,"Joyce, M.G., Jensen, J.L., Chen, W.H., Kanekiyo, M.",2.2,X-RAY DIFFRACTION,0.237,0.193,False,True,IGHV4,IGLV2,Lambda,,,,,,8sgn_H_L_G,False
2qqn,H,L,0,A,protein,,neuropilin-1,SIGNALING PROTEIN,07/26/07,Neuropilin-1 b1 Domain in Complex with a VEGF-Blocking Fab,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Appleton, B.A., Wiesmann, C.",2.2,X-RAY DIFFRACTION,0.207,0.159,False,True,IGHV3,IGKV1,Kappa,,,,,,2qqn_H_L_A,False
9mj3,H,L,0,C,protein,,eod-gt8 engineered mutant of gp120,IMMUNE SYSTEM,05/28/25,"Crystal structure of the VRC01-class antibody 12A01, derived from GT1.1 vaccination, in complex with eOD-GT8",Homo sapiens; Human immunodeficiency virus 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Agrawal, S., Wilson, I.A.",2.2,X-RAY DIFFRACTION,0.246,0.217,False,True,IGHV1,IGKV3,Kappa,,,,,,9mj3_H_L_C,False
3wkm,H,L,0,A,protein,,putative zinc metalloprotease aq_1964,HYDROLASE,10/28/13,The periplasmic PDZ tandem fragment of the RseP homologue from Aquifex aeolicus in complex with the Fab fragment,AQUIFEX AEOLICUS; MUS MUSCULUS,mus musculus,mus musculus,aquifex aeolicus,"Nogi, T., Tabata, S., Tamura-kawakami, K., Takagi, J.",2.2,X-RAY DIFFRACTION,0.272,0.224,False,False,IGHV14,IGKV3,Kappa,,,,,,3wkm_H_L_A,False
1nmb,H,L,0,N,protein,,n9 neuraminidase,COMPLEX (HYDROLASE/IMMUNOGLOBULIN),01/17/95,THE STRUCTURE OF A COMPLEX BETWEEN THE NC10 ANTIBODY AND INFLUENZA VIRUS NEURAMINIDASE AND COMPARISON WITH THE OVERLAPPING BINDING SITE OF THE NC41 ANTIBODY,INFLUENZA A VIRUS; MUS MUSCULUS,mus musculus,mus musculus,influenza a virus,"Malby, R.L., Tulip, W.R., Colman, P.M.",2.2,X-RAY DIFFRACTION,unknown,0.210,False,False,IGHV1,IGKV10,Kappa,,,,,,1nmb_H_L_N,True
6mnr,H,L,0,P,peptide,,envelope glycoprotein,IMMUNE SYSTEM,10/02/18,Rhesus macaque anti-HIV V3 antibody DH753 with gp120 V3 ZAM18 peptide,MACACA MULATTA; SYNTHETIC CONSTRUCT,macaca mulatta,macaca mulatta,human immunodeficiency virus 1,"Nicely, N.I.",2.201,X-RAY DIFFRACTION,0.255,0.192,False,True,IGHV3,IGLV1,Lambda,,,,,,6mnr_H_L_P,False
6xxv,D,E,0,F,protein,,s2_1.2,IMMUNE SYSTEM,01/28/20,Crystal Structure of a computationally designed Immunogen S2_1.2 in complex with its elicited antibody C57,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Yang, C., Sesterhenn, F., Correia, B.E., Pojer, F.",2.20116,X-RAY DIFFRACTION,0.244,0.209,False,True,IGHV3,IGKV1,Kappa,,,,,,6xxv_D_E_F,False
7kq7,H,L,0,B,protein,,interleukin-21 receptor,PROTEIN BINDING/Immune System,11/13/20,Crystal structure of IL21R in complex with an antibody Fab fragment,RATTUS NORVEGICUS; HOMO SAPIENS,rattus norvegicus,rattus norvegicus,homo sapiens,"Mosyak, L., Svenson, K.",2.203,X-RAY DIFFRACTION,0.240,0.215,False,True,IGHV5,IGKV3,Kappa,,,,,,7kq7_H_L_B,False
5x2m,H,L,0,A,protein,,"taste receptor, type 1, member 2a",SIGNALING PROTEIN/IMMUNE SYSTEM,02/02/17,Crystal structure of the medaka fish taste receptor T1r2a-T1r3 ligand binding domains in complex with L-glutamine,ORYZIAS LATIPES; MUS MUSCULUS,mus musculus,mus musculus,oryzias latipes,"Nuemket, N., Yasui, N., Atsumi, N., Yamashita, A.",2.206,X-RAY DIFFRACTION,0.227,0.173,False,True,IGHV1,IGKV3,Kappa,,,,,,5x2m_H_L_A,False
7n4j,H,L,0,A,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,06/04/21,Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing human antibody WRAIR-2173.,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Sankhala, R.S., Joyce, M.G.",2.207,X-RAY DIFFRACTION,0.207,0.172,False,True,IGHV4,IGLV1,Lambda,,,,,,7n4j_H_L_A,False
4nrx,A,B,0,C,peptide,,envelope glycoprotein gp41,IMMUNE SYSTEM,11/27/13,Crystal Structure of HIV-1 Neutralizing Antibody m66 in complex with gp41 MPER peptide,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Ofek, G., Yang, Y., Kwong, P.D.",2.21,X-RAY DIFFRACTION,0.215,0.188,False,True,IGHV5,IGKV1,Kappa,,,,,,4nrx_A_B_C,False
2w65,A,B,0,E,peptide,,collagen derived peptide pcii-cit1,IMMUNE SYSTEM,12/17/08,Anti citrullinated Collagen type 2 antibody acc4 in complex with a  citrullinated peptide,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,mus musculus,"Uysal, H., Bockermann, R., Nandakumar, K.S., Sehnert, B., Bajtner, E., Engstrom, A., Serre, G., Burkhardt, H., Thunnissen, M.M.G.M., Holmdahl, R.",2.21,X-RAY DIFFRACTION,0.285,0.234,False,False,IGHV9,IGKV1,Kappa,,,,,,2w65_A_B_E,False
8udz,C,D,0,B,protein,,transforming growth factor beta-1 proprotein,SIGNALING PROTEIN/IMMUNE SYSTEM,07/17/24,The Structure of LTBP-49247 Fab Bound to TGFbeta1 Small Latent Complex,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Streich Jr., F.C., Nicholls, S.B., Boston, C.J., Ramachandran, S.",2.21,X-RAY DIFFRACTION,0.264,0.232,False,True,IGHV3,IGLV6,Lambda,,,,,,8udz_C_D_B,False
6db7,H,L,0,P,peptide,,hiv-1 gp120 v3 peptide from mn strain,IMMUNE SYSTEM,05/02/18,Crystal structure of anti-HIV-1 V3 Fab 1334 in complex with a HIV-1 gp120 V3 peptide from MN strain,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Chan, K.-W., Kong, X.-P.",2.213,X-RAY DIFFRACTION,0.260,0.213,False,True,IGHV1,IGLV3,Lambda,,,,,,6db7_H_L_P,False
4wht,Q,R,0,q,peptide,,unknown,VIRAL PROTEIN,09/23/14,"Structure of the Hepatitis C virus envelope glycoprotein E2 antigenic region 412-423 bound to the broadly neutralizing antibody 3/11, P1 crystal form",HEPATITIS C VIRUS; RATTUS NORVEGICUS,rattus norvegicus,rattus norvegicus,hepatitis c virus,"Krey, T., Rey, F.A.",2.22,X-RAY DIFFRACTION,0.243,0.209,False,True,IGHV5,IGKV2,Kappa,7.900000000000001e-09,-11.053614350904786,Unknown,,TBD,4wht_Q_R_q,False
9uaa,G,F,0,B,protein,,fusion glycoprotein f0,VIRAL PROTEIN/IMMUNE SYSTEM,04/09/25,Nipah virus fusion glycoprotein in complex with a broadly neutralizing antibody 5C8,Henipavirus nipahense; Macaca,macaca,macaca,henipavirus nipahense,"Fan, P.F., Ren, Y., Yu, C.M., Chen, W.",2.22,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV1,Kappa,,,,,,9uaa_G_F_B,False
4jzo,G,H,0,L,peptide,,envelope glycoprotein e2,immune system/viral protein,04/03/13,Three dimensional structure of broadly neutralizing human anti - Hepatitis C virus (HCV) glycoprotein E2 Fab fragment HC84-27,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,hepatitis c virus (isolate h),"Krey, T., Rey, F.A.",2.22,X-RAY DIFFRACTION,0.236,0.196,False,True,IGHV1,IGLV3,Lambda,,,,,,4jzo_G_H_L,False
7x8p,C,B,0,A,protein,,frizzled-2,SIGNALING PROTEIN,02/01/23,Frizzled 2 CRD in complex with pF7_A5 Fab,Homo sapiens; synthetic construct,synthetic construct,synthetic construct,homo sapiens,"Ge, Q., Wang, Q.",2.24,X-RAY DIFFRACTION,0.241,0.216,False,True,IGHV3,IGLV3,Lambda,,,,,,7x8p_C_B_A,False
9mla,G,J,0,A,protein,,surface protein,VIRAL PROTEIN,07/30/25,Pre-fusion HERV-K Envelope Protein Trimer Ectodomain in complex with Kenv-6 Fab,Enterobacteria phage T4; Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Shek, J., Sun, C., Hastie, K., Saphire, E.O.",2.24,ELECTRON MICROSCOPY,,,False,True,IGHV9,IGKV3,Kappa,,,,,,9mla_G_J_A,False
8dg9,H,L,0,A,protein,,fusion glycoprotein f0,IMMUNE SYSTEM,02/22/23,Cryo-EM Structure of RSV prefusion F trimer in complex with three MxR Fabs,Homo sapiens; Respiratory syncytial virus A2,homo sapiens,homo sapiens,respiratory syncytial virus a2,"Rodarte, J.V., Pancera, M.",2.24,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV1,Lambda,,,,,,8dg9_H_L_A,False
7x63,H,L,0,R,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,03/08/23,SARS-CoV-2-Beta-RBD and BD-236-GWP/P-VK antibody complex,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Shi, R., Wang, Y., Wu, Z., Han, X., Yan, J.",2.24,X-RAY DIFFRACTION,0.224,0.193,False,True,IGHV3,IGKV1,Kappa,,,,,,7x63_H_L_R,False
5f96,H,L,0,G,protein,,clade a/e 93th057 hiv-1 gp120 core,IMMUNE SYSTEM,12/09/15,Crystal structure of broadly neutralizing VH1-46 germline-derived CD4-binding site-directed antibody CH235.12 in complex with HIV-1 clade A/E 93TH057 gp120,HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Zhou, T., Kwong, P.D.",2.2407,X-RAY DIFFRACTION,0.233,0.190,False,True,unknown,IGKV3,Kappa,,,,,,5f96_H_L_G,False
7lop,X,Y,0,Z,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,02/10/21,Crystal structure of SARS-CoV-2 receptor binding domain in complex with antibodies CV05-163 and CR3022,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Yuan, M., Zhu, X., Wilson, I.A.",2.246,X-RAY DIFFRACTION,0.268,0.220,False,True,IGHV1,IGKV3,Kappa,,,,,,7lop_X_Y_Z,False
6w7s,H,L,0,A,protein,,eryai,OXIDOREDUCTASE/IMMUNE SYSTEM,03/19/20,Ketoreductase from module 1 of the 6-deoxyerythronolide B synthase (KR1) in complex with antibody fragment (Fab) 2G10,SACCHAROPOLYSPORA ERYTHRAEA; HOMO SAPIENS,homo sapiens,homo sapiens,saccharopolyspora erythraea,"Cogan, D.P., Mathews, I.I., Khosla, C.",2.25,X-RAY DIFFRACTION,0.232,0.179,False,True,IGHV3,IGLV5,Lambda,,,,,,6w7s_H_L_A,False
7t25,H,L,0,E,protein,,outer surface protein a,IMMUNE SYSTEM,12/14/22,OspA-Fab 319-44 complex structure,Borreliella burgdorferi B31; Homo sapiens,homo sapiens,homo sapiens,borreliella burgdorferi b31,"Rudolph, M.J.",2.25,X-RAY DIFFRACTION,0.233,0.191,False,True,IGHV5,IGKV3,Kappa,,,,,,7t25_H_L_E,False
4lvn,C,B,0,A,protein,,subtilisin-like serine protease,hydrolase/inhibitor/immune system,07/26/13,Crystal structure of PfSUB1-prodomain-NIMP.M7 Fab complex,PLASMODIUM FALCIPARUM; MUS MUSCULUS,mus musculus,mus musculus,plasmodium falciparum,"Withers-Martinez, C., Blackman, M.J.",2.25,X-RAY DIFFRACTION,0.237,0.195,False,False,IGHV3,IGKV4,Kappa,,,,,,4lvn_C_B_A,False
7mzk,N,M,0,B,protein,,spike protein s1,VIRAL PROTEIN,05/24/21,SARS-CoV-2 receptor binding domain bound to Fab WCSL 129 and Fab PDI 96,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Pymm, P., Dietrich, M.H., Tan, L.L., Chan, L.J., Tham, W.H.",2.25,X-RAY DIFFRACTION,0.235,0.197,False,True,IGHV1,IGKV4,Kappa,,,,,,7mzk_N_M_B,False
4m5z,H,L,0,A,protein,,hemagglutinin ha1 chain,VIRAL PROTEIN/IMMUNE SYSTEM,08/08/13,"Crystal structure of broadly neutralizing antibody 5J8 bound to 2009 pandemic influenza hemagglutinin, HA1 subunit",HOMO SAPIENS; INFLUENZA A VIRUS,homo sapiens,homo sapiens,influenza a virus,"Hong, M., Lee, P.S., Wilson, I.A.",2.25,X-RAY DIFFRACTION,0.238,0.191,False,True,IGHV4,IGLV3,Lambda,5e-09,-11.324631107601816,BLI,,TBD,4m5z_H_L_A,False
8dxt,H,L,0,R,protein,,spike protein s1,ANTIVIRAL PROTEIN,01/18/23,Fab arm of antibody GAR12 bound to the receptor binding domain of SARS-CoV-2.,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Langley, D.B., Christ, D., Henry, J.Y.",2.25,X-RAY DIFFRACTION,0.254,0.211,False,True,IGHV3,IGKV1,Kappa,,,,,,8dxt_H_L_R,False
6vc9,H,L,0,A,protein,,"5'-nucleotidase, ecto (cd73), isoform cra_a",IMMUNE SYSTEM,12/20/19,TB19 complex,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Zhou, Y.F., Lord, D.M.",2.25,X-RAY DIFFRACTION,0.279,0.237,False,True,IGHV4,IGKV3,Kappa,,,,,,6vc9_H_L_A,False
8g4p,A,B,0,E,protein,,ara h 2 allergen,ALLERGEN,12/20/23,Crystal structure of the peanut allergen Ara h 2 bound by two neutralizing antibodies 13T1 and 13T5,Arachis hypogaea; Homo sapiens,homo sapiens,homo sapiens,arachis hypogaea,"Pedersen, L.C., Mueller, G.A., Min, J.",2.25,X-RAY DIFFRACTION,0.218,0.189,False,True,IGHV4,IGKV1,Kappa,,,,,,8g4p_A_B_E,False
8g4p,C,D,0,E,protein,,ara h 2 allergen,ALLERGEN,12/20/23,Crystal structure of the peanut allergen Ara h 2 bound by two neutralizing antibodies 13T1 and 13T5,Arachis hypogaea; Homo sapiens,homo sapiens,homo sapiens,arachis hypogaea,"Pedersen, L.C., Mueller, G.A., Min, J.",2.25,X-RAY DIFFRACTION,0.218,0.189,False,True,IGHV3,IGKV3,Kappa,,,,,,8g4p_C_D_E,False
6e4x,Z,Y,0,B,protein,,hemagglutinin,VIRAL PROTEIN/IMMUNE SYSTEM,07/18/18,Human antibody S5V2-29 in complex with influenza hemagglutinin A/Texas/50/2012 (H3N2),INFLUENZA A VIRUS (A/TEXAS/50/2012(H3N2)); HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus (a/texas/50/2012(h3n2)),"McCarthy, K.R., Harrison, S.C.",2.25,X-RAY DIFFRACTION,0.225,0.203,False,True,IGHV4,IGKV1,Kappa,,,,,,6e4x_Z_Y_B,False
3hb3,C,D,0,B,protein,,cytochrome c oxidase subunit 2,OXIDOREDUCTASE,05/04/09,High resolution crystal structure of Paracoccus denitrificans cytochrome c oxidase,PARACOCCUS DENITRIFICANS; MUS MUSCULUS,mus musculus,mus musculus,paracoccus denitrificans,"Koepke, J., Angerer, H., Peng, G.",2.25,X-RAY DIFFRACTION,0.280,0.218,False,True,IGHV5,IGKV12,Kappa,,,,,,3hb3_C_D_B,False
7kn3,M,N,0,B,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,11/04/20,Crystal structure of SARS-CoV-2 spike protein receptor-binding domain complexed with a pre-pandemic antibody S-B8 Fab,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Liu, H., Zhu, X., Wilson, I.A.",2.251,X-RAY DIFFRACTION,0.222,0.186,False,True,IGHV3,IGKV4,Kappa,,,,,,7kn3_M_N_B,False
7jie,C,D,0,B,protein,,vp1,VIRAL PROTEIN,07/23/20,Structure of GII.4 P-domain in Complex with NORO-320 FAB,NOROVIRUS HU/GII.4/SYDNEY/NSW0514/2012/AU; HOMO SAPIENS,homo sapiens,homo sapiens,norovirus hu/gii.4/sydney/nsw0514/2012/au,"Salmen, W., Hu, L., Prasad, B.",2.254,X-RAY DIFFRACTION,0.225,0.181,False,True,IGHV1,IGKV2,Kappa,,,,,,7jie_C_D_B,False
7lj5,E,D,0,A,protein,,isoform 2 of potassium channel subfamily k member 4,METAL TRANSPORT/Immune System,01/28/21,Human TRAAK K+ channel FHIEG mutant A198E in a K+ bound conductive conformation,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Rietmeijer, R.A., Brohawn, S.G.",2.26,X-RAY DIFFRACTION,0.252,0.220,False,True,IGHV1,IGKV4,Kappa,,,,,,7lj5_E_D_A,False
7ps6,H,L,0,E,protein,,spike protein s1,VIRAL PROTEIN,09/22/21,Crystal structure of the receptor binding domain of SARS-CoV-2 beta variant spike glycoprotein in complex with Beta-44 and Beta-54 Fabs,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, D., Ren, J., Stuart, D.I.",2.26,X-RAY DIFFRACTION,0.240,0.215,False,True,IGHV4,IGKV1,Kappa,,,,,,7ps6_H_L_E,False
7ps6,C,D,0,E,protein,,spike protein s1,VIRAL PROTEIN,09/22/21,Crystal structure of the receptor binding domain of SARS-CoV-2 beta variant spike glycoprotein in complex with Beta-44 and Beta-54 Fabs,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, D., Ren, J., Stuart, D.I.",2.26,X-RAY DIFFRACTION,0.240,0.215,False,True,IGHV1,IGLV2,Lambda,,,,,,7ps6_C_D_E,False
4zfg,H,L,0,A,protein,,angiopoietin-2,SIGNALING PROTEIN/IMMUNE SYSTEM,04/21/15,Dual-specificity Fab 5A12 in complex with Angiopoietin 2,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Harris, S.F., Wu, P.",2.27,X-RAY DIFFRACTION,0.223,0.177,False,True,IGHV3,IGKV1,Kappa,5e-09,-11.324631107601816,SPR,,TBD,4zfg_H_L_A,False
5eor,H,L,0,A,peptide,,protein a27,VIRAL PROTEIN/IMMUNE SYSTEM,11/10/15,Structure of the murine antibody Fab 8E3 bound to the vaccinia virus A27 peptide 101-110,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,vaccinia virus,"Matho, M.H., Zajonc, D.M.",2.27,X-RAY DIFFRACTION,0.224,0.203,False,False,IGHV2,IGLV3,Lambda,,,,,,5eor_H_L_A,False
7kpg,H,L,0,S,protein,,tyrosine-protein phosphatase non-receptor type substrate 1,SIGNALING PROTEIN,11/11/20,Blocking Fab 25 anti-SIRP-alpha antibody in complex with SIRP-alpha Variant 1,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,homo sapiens,"Sim, J., Pons, J.",2.27,X-RAY DIFFRACTION,0.282,0.234,False,True,IGHV3,IGLV3,Lambda,,,,,,7kpg_H_L_S,False
4d9q,H,L,0,A,protein,,factor d,HYDROLASE/IMMUNE SYSTEM,01/11/12,Inhibiting Alternative Pathway Complement Activation by Targeting the Exosite on Factor D,MACACA MULATTA; HOMO SAPIENS,homo sapiens,homo sapiens,macaca mulatta,"Murray, J.M., Wiesmann, C.",2.28,X-RAY DIFFRACTION,0.230,0.189,False,True,IGHV7,IGKV1,Kappa,3e-11,-14.355775131829494,SPR,,TBD,4d9q_H_L_A,False
9vdy,H,L,0,B,protein,,envelopment polyprotein,VIRAL PROTEIN/IMMUNE SYSTEM,01/07/26,hA5-6 Fab bound to SFTSV glycoprotein Gn,Homo sapiens; Severe fever with thrombocytopenia syndrome virus,homo sapiens,homo sapiens,severe fever with thrombocytopenia syndromevirus ,"Deng, Z., Kuang, W., Zhao, H.",2.28,X-RAY DIFFRACTION,0.240,0.204,False,True,IGHV1,IGKV3,Kappa,,,,,,9vdy_H_L_B,False
7n4i,H,L,0,C,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,06/04/21,Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing human antibody WRAIR-2057.,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Sankhala, R.S., Joyce, M.G.",2.284,X-RAY DIFFRACTION,0.238,0.200,False,True,IGHV5,IGKV1,Kappa,,,,,,7n4i_H_L_C,False
9ejf,O,P,0,K,protein,,neuraminidase,VIRAL PROTEIN,08/13/25,"NCS.1.1 Fab in complex with the sNAp of A/California/04/2009 (CA09, H1N1) -- 4 Fabs [C4 Reconstruction]",Homo sapiens; Influenza A virus,homo sapiens,homo sapiens,influenza a virus,"Borst, A.J.",2.29,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV2,Kappa,,,,,,9ejf_O_P_K,False
7u8e,H,L,0,A,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,03/15/23,Crystal structure of antibody Ab246 in complex with SARS-CoV-2 receptor binding domain,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Sankhala, R.S., Joyce, M.G.",2.29,X-RAY DIFFRACTION,0.248,0.204,False,True,IGHV4,IGLV5,Lambda,,,,,,7u8e_H_L_A,False
7msq,D,E,0,B,protein,,spike protein s1,VIRAL PROTEIN/ANTIVIRAL PROTEIN,05/12/21,Complex between the Fab arm of AB-3467 and the SARS-CoV-2 receptor binding domain (RBD),SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Langley, D.B., Christ, D.",2.29,X-RAY DIFFRACTION,0.245,0.194,False,True,IGHV4,IGKV1,Kappa,,,,,,7msq_D_E_B,False
7q6c,H,L,0,A,protein,,complement component c6,IMMUNE SYSTEM,11/06/21,complement C6 FIM1-2 bound to CP010 antibody,HOMO SAPIENS; MUS MUSCULUS; LAMA GLAMA,mus musculus,mus musculus,homo sapiens,"Olesen, H.G., Andersen, G.R.",2.29274,X-RAY DIFFRACTION,0.233,0.208,False,True,IGHV5,IGKV2,Kappa,,,,,,7q6c_H_L_A,False
5j13,C,B,0,A,protein,,thymic stromal lymphopoietin,IMMUNE SYSTEM,03/28/16,Cytokine antibody complex,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Verstraete, K., Savvides, S.N.",2.298,X-RAY DIFFRACTION,0.215,0.189,False,True,IGHV3,IGLV3,Lambda,6e-11,-13.945096739509712,SPR,,TBD,5j13_C_B_A,False
6vbp,C,D,0,E,peptide,,envelope glycoprotein gp160,IMMUNE SYSTEM/Viral Protein,12/19/19,Crystal structure of anti-HIV-1 antibody DH815 bound to gp120 V2 peptide,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Janus, B.M., Ofek, G.",2.298,X-RAY DIFFRACTION,0.229,0.180,False,True,IGHV5,IGKV4,Kappa,,,,,,6vbp_C_D_E,False
6cxg,M,K,0,C,peptide,,10v1s glycopeptide,IMMUNE SYSTEM,04/03/18,anti-HIV-1 Fab 2G12 in complex with glycopeptide 10V1S,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,synthetic construct,"Stanfield, R.L., Wilson, I.A.",2.298,X-RAY DIFFRACTION,0.237,0.197,False,True,unknown,IGKV1,Kappa,,,,,,6cxg_M_K_C,False
8yor,B,A,0,E,peptide,,"histidine--trna ligase, cytoplasmic",SPLICING/IMMUNE SYSTEM,02/12/25,Complex of HARSWHEP and a-HARSWHEP Fab,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Zhai, L.",2.3,X-RAY DIFFRACTION,0.273,0.227,False,True,IGHV1,IGKV3,Kappa,,,,,,8yor_B_A_E,False
4u0r,B,C,0,A,protein,,reticulocyte binding protein 5,IMMUNE SYSTEM,07/14/14,Plasmodium falciparum reticulocyte-binding protein homologue 5 (PfRH5) bound to monoclonal antibody 9AD4,PLASMODIUM FALCIPARUM; ORYCTOLAGUS CUNICULUS,oryctolagus cuniculus,oryctolagus cuniculus,plasmodium falciparum,"Wright, K.E., Hjerrild, K.A., Bartlett, J., Douglas, A.D., Jin, J., Brown, R.E., Ashfield, R., Clemmensen, S.B., de Jongh, W.A., Draper, S.J., Higgins, M.K.",2.3,X-RAY DIFFRACTION,0.258,0.221,False,True,IGHV5,IGKV3,Kappa,,,,,,4u0r_B_C_A,False
4hcr,M,N,0,B,protein,,mucosal addressin cell adhesion molecule 1,IMMUNE SYSTEM,10/01/12,Crystal structure of human MAdCAM-1 D1D2 complexed with Fab PF-547659,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Springer, T., Yu, Y., Zhu, J.",2.3,X-RAY DIFFRACTION,0.208,0.153,False,True,IGHV1,IGKV2D,Kappa,,,,,,4hcr_M_N_B,False
8qrg,H,L,0,E,protein,,spike protein s1,VIRAL PROTEIN,05/08/24,SARS-CoV-2 delta RBD complexed with XBB-2 Fab and NbC1,Homo sapiens; Lama glama; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, D., Ren, J., Stuart, D.I.",2.3,X-RAY DIFFRACTION,0.228,0.182,False,True,IGHV3,IGKV1,Kappa,,,,,,8qrg_H_L_E,False
6elu,B,C,0,A,protein,,serum resistance associated; vsg protein,ANTITOXIN,09/29/17,Structure of Serum Resistance Associated protein from T. b. rhodesiense,TRYPANOSOMA BRUCEI RHODESIENSE; MUS MUSCULUS,mus musculus,mus musculus,trypanosoma brucei rhodesiense,"Zoll, S., Higgins, M.K.",2.3,X-RAY DIFFRACTION,0.220,0.191,False,True,IGHV7,IGKV3,Kappa,,,,,,6elu_B_C_A,False
4plj,D,C,0,B,protein,,capsid protein,VIRAL PROTEIN/IMMUME SYSTEM,05/18/14,Hepatitis E Virus E2s domain (Genotype IV) in complex with a neutralizing antibody 8G12,HEPATITIS E VIRUS; MUS MUSCULUS,mus musculus,mus musculus,hepatitis e virus,"Tang, X.H., Li, S.W., Sivaraman, J.",2.3,X-RAY DIFFRACTION,0.242,0.187,False,False,IGHV1,IGKV12,Kappa,,,,,,4plj_D_C_B,False
9azr,H,L,0,E,protein,,hemagglutinin ha1 chain,VIRAL PROTEIN/IMMUNE SYSTEM,03/12/25,Lineage 860 UCA Fab bound to A/Massachusetts/1/1990 hemagglutinin head,Homo sapiens; Influenza A virus,homo sapiens,homo sapiens,influenza a virus,"Maurer, D.P., Schmidt, A.G.",2.3,X-RAY DIFFRACTION,0.270,0.229,False,True,IGHV1,IGLV3,Lambda,,,,,,9azr_H_L_E,False
2g5b,B,A,0,I,peptide,,bax peptide,APOPTOSIS,02/22/06,Crystal Structure of the anti-Bax monoclonal antibody 6A7 and a Bax peptide.,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,,"Peyerl, F.W., Dai, S., Murphy, G.A., Marrack, P., Kappler, J.W.",2.3,X-RAY DIFFRACTION,0.275,0.234,False,True,IGHV7,IGKV8,Kappa,,,,,,2g5b_B_A_I,False
7xy8,I,M,0,B,protein,,isoform 2 of basigin,PROTEIN BINDING,11/23/22,Crystal structure of antibody Fab fragment in complex with CD147(EMMPIRIN),Homo sapiens; synthetic construct,synthetic construct,synthetic construct,homo sapiens,"Nakamura, K., Amano, M., Yoneda, K., Suzuki, M., Fukuchi, K.",2.3,X-RAY DIFFRACTION,0.281,0.236,False,True,IGHV1,IGKV1,Kappa,,,,,,7xy8_I_M_B,False
8gye,E,F,0,A,protein,,tumor necrosis factor receptor superfamily member 9,IMMUNE SYSTEM,09/27/23,Crystal Structure of the 4-1BB in complex with ZG033 Fab,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Zhu, M., Cheng, L.S., Gao, Y.",2.3,X-RAY DIFFRACTION,0.277,0.222,False,True,IGHV2,IGKV10,Kappa,,,,,,8gye_E_F_A,False
5dhv,H,L,0,M,protein,,protein rev,IMMUNE SYSTEM,08/31/15,HIV-1 Rev NTD dimers with variable crossing angles,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"DiMattia, M.A., Watts, N.R., Wingfield, P.T., Grimes, J.M., Stuart, D.I., Steven, A.C.",2.3,X-RAY DIFFRACTION,0.227,0.188,False,True,IGHV1,IGKV1,Kappa,,,,,,5dhv_H_L_M,False
6pze,H,L,0,A,protein,,neuraminidase,IMMUNE SYSTEM,07/31/19,Crystal structure of human NA-45 Fab in complex with neuraminidase Y169aH mutant from A/Shanghai/2/2013 (H7N9),INFLUENZA A VIRUS (A/SHANGHAI/02/2013(H7N9)); HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus (a/shanghai/02/2013(h7n9)),"Zhu, X., Wilson, I.A.",2.3,X-RAY DIFFRACTION,0.197,0.156,False,True,IGHV4,IGLV1,Lambda,,,,,,6pze_H_L_A,False
5d96,C,B,0,A,protein,,sulfhydryl oxidase 1,IMMUNE SYSTEM,08/18/15,Oxidoreductase Fragment of Mouse QSOX1 in Complex with a FAb Fragment from an Antibody Targeting Mouse and Human QSOX1,OTHER SEQUENCES; MUS MUSCULUS,other sequences,other sequences,mus musculus,"Fass, D., Grossman, I.",2.3,X-RAY DIFFRACTION,0.228,0.167,False,True,IGHV2,IGKV6,Kappa,,,,,,5d96_C_B_A,False
8g3z,J,K,0,B,protein,,neuraminidase,VIRAL PROTEIN/IMMUNE SYSTEM,05/31/23,Neuraminidase of B/Massachusetts/02/2012 (Yamagata) in complex with 4 FNI17 Fab molecules,Homo sapiens; Influenza B virus,homo sapiens,homo sapiens,influenza b virus,"Dang, H.V., Snell, G.",2.3,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,8g3z_J_K_B,False
7n8h,C,B,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,06/14/21,SARS-CoV-2 S (B.1.429 / epsilon variant) + S2M11 + S2L20 Global Refinement,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"McCallum, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)",2.3,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7n8h_C_B_A,False
5ush,D,E,0,A,protein,,imv membrane protein,VIRAL PROTEIN/Immune system,02/13/17,Structure of vaccinia virus D8 protein bound to human Fab vv66,VACCINIA VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,vaccinia virus,"Zajonc, D.M.",2.3,X-RAY DIFFRACTION,0.257,0.218,False,False,IGHV4,IGLV1,Lambda,1.5e-09,-12.037965345328766,SPR,,TBD,5ush_D_E_A,False
8gb8,H,L,0,E,protein,,spike protein s1,IMMUNE SYSTEM,05/24/23,Crystal structure of SARS-CoV-2 BA.2 receptor binding domain in complex with neutralizing antibody 20A7,Macaca mulatta; Severe acute respiratory syndrome coronavirus 2,macaca mulatta,macaca mulatta,severe acute respiratory syndrome coronavirus2 ,"Yuan, M., Wilson, I.A.",2.3,X-RAY DIFFRACTION,0.228,0.200,False,True,IGHV3,IGKV3,Kappa,,,,,,8gb8_H_L_E,False
3hi6,H,L,0,A,protein,,integrin alpha-l,cell adhesion/immune system,05/19/09,Crystal structure of intermediate affinity I domain of integrin LFA-1 with the Fab fragment of its antibody AL-57,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Zhang, H., Wang, J.",2.3,X-RAY DIFFRACTION,0.226,0.170,False,True,IGHV3,IGKV1,Kappa,4.7e-06,-7.26,SPR,,19805116,3hi6_H_L_A,False
6xq0,E,F,0,D,protein,,hemagglutinin,VIRAL PROTEIN/IMMUNE SYSTEM,07/09/20,Human antibody S8V2-18 in complex with the influenza hemagglutinin head domain of A/California/7/2009(NYMC-X181)(H1N1),INFLUENZA A VIRUS (A/REASSORTANT/NYMC X-181A(A/NYMC X-157 X CALIFORNIA/07/2009)(H1N1)); HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus (a/reassortant/nymc x-181a(a/nymc x-157 x california/07/2009)(h1n1)) ,"McCarthy, K.R., Harrison, S.C.",2.3,X-RAY DIFFRACTION,0.268,0.222,False,True,IGHV3,IGKV3,Kappa,,,,,,6xq0_E_F_D,False
1bgx,H,L,0,T,protein,,taq dna polymerase,COMPLEX (POLYMERASE/INHIBITOR),06/02/98,"TAQ POLYMERASE IN COMPLEX WITH TP7, AN INHIBITORY FAB",THERMUS AQUATICUS; MUS MUSCULUS,mus musculus,mus musculus,thermus aquaticus,"Murali, R., Sharkey, D.J., Daiss, J.L., Krishna Murthy, H.M.",2.3,X-RAY DIFFRACTION,0.253,0.189,False,True,IGHV3,IGKV4,Kappa,,,,,,1bgx_H_L_T,False
8tft,I,M,0,F,protein,,t-cell immunoglobulin mucin receptor 3,IMMUNE SYSTEM,08/28/24,Fab of O13-1 human IgG1 antibody bound to IgV domain of human TIM-3,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Oganesyan, V.Y., van Dyk, N., Mazor, Y., Yang, C.",2.3,X-RAY DIFFRACTION,0.271,0.244,False,True,IGHV3,IGLV3,Lambda,,,,,,8tft_I_M_F,False
6df1,H,L,0,A,peptide,,leu-ptr,IMMUNE SYSTEM,05/13/18,anti-phosphotyrosine antibody 4G10-4D5 Fab complexed with sulfate,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,synthetic construct,"Mou, K., Leung, K., Wells, J.A.",2.3,X-RAY DIFFRACTION,0.222,0.203,False,True,IGHV3,IGKV1,Kappa,2.77e-07,-8.946058216241992,Unknown,,TBD,6df1_H_L_A,False
4aei,J,N,0,C,protein,,alpha-mammal toxin aah2,IMMUNE SYSTEM/TOXIN,01/10/12,Crystal structure of the AaHII-Fab4C1 complex,ANDROCTONUS AUSTRALIS HECTOR; MUS MUSCULUS,mus musculus,mus musculus,androctonus australis hector,"Fabrichny, I.P., Mondielli, G., Conrod, S., Martin-Eauclaire, M.F., Bourne, Y., Marchot, P.",2.3,X-RAY DIFFRACTION,0.25403,0.19862,False,False,IGHV5,IGKV1,Kappa,8e-10,-12.4104057171432,Unknown,,TBD,4aei_J_N_C,False
3w9e,A,B,0,C,protein,,envelope glycoprotein d,VIRAL PROTEIN/IMMUNE SYSTEM,04/03/13,Structure of Human Monoclonal Antibody E317 Fab Complex with HSV-2 gD,HOMO SAPIENS; HUMAN HERPESVIRUS 2,homo sapiens,homo sapiens,human herpesvirus 2,"Lee, C.C., Lin, L.L., Wang, A.H.J.",2.3,X-RAY DIFFRACTION,0.255,0.203,False,True,IGHV1,IGKV3,Kappa,,,,,,3w9e_A_B_C,False
4lsu,H,L,0,G,protein,,hiv-1 clade a/e strain 93th057 gp120,viral protein/immune system,07/23/13,Crystal structure of broadly and potently neutralizing antibody VRC-PG20 in complex with HIV-1 clade A/E 93TH057 gp120,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Zhou, T., Moquin, S., Kwong, P.D.",2.3,X-RAY DIFFRACTION,0.234,0.179,False,True,IGHV1,IGLV2,Lambda,,,,,,4lsu_H_L_G,False
4lqf,H,L,0,A,protein,,a33r,IMMUNE SYSTEM,07/17/13,Structure of murine IgG2b A2C7-Fab in complex with vaccinia antigen A33R at the resolution of 2.3 Angstroms,MUS MUSCULUS; VACCINIA VIRUS,mus musculus,mus musculus,vaccinia virus,"Matho, M.H., Schlossman, A.M., Zajonc, D.M.",2.3,X-RAY DIFFRACTION,0.230,0.197,False,True,IGHV5,IGKV1,Kappa,6.45e-11,-13.90224792779698,SPR,,TBD,4lqf_H_L_A,False
4qci,B,A,0,D,protein,,platelet-derived growth factor subunit b,CYTOKINE/CYTOKINE RECEPTOR,05/12/14,PDGF-B blocking antibody bound to PDGF-BB,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Kuai, J., Mosyak, L., Tam, M., LaVallie, E., Pullen, N., Carven, G.",2.3,X-RAY DIFFRACTION,0.247,0.211,False,True,IGHV3,IGLV3,Lambda,2.8e-11,-14.396652282221847,SPR,,TBD,4qci_B_A_D,False
6sv2,H,L,0,A,protein,,major prion protein,PROTEIN BINDING,09/17/19,Human prion protein (PrP) fragment 119-231 (G127V M129 variant) complexed to ICSM 18 (anti-Prp therapeutic antibody) Fab fragment,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Conners, R.",2.3,X-RAY DIFFRACTION,0.251,0.200,False,False,IGHV1,IGKV4,Kappa,,,,,,6sv2_H_L_A,False
6pxh,H,L,0,B,protein,,mers-cov s1-ntd,IMMUNE SYSTEM/Viral protein,07/26/19,Crystal Structure of MERS-CoV S1-NTD bound with G2 Fab,MIDDLE EAST RESPIRATORY SYNDROME-RELATED CORONAVIRUS; MUS MUSCULUS,mus musculus,mus musculus,middle east respiratory syndrome-relatedcoronavirus ,"Wang, N., McLellan, J.S.",2.3,X-RAY DIFFRACTION,0.213,0.180,False,True,IGHV1,IGKV3,Kappa,,,,,,6pxh_H_L_B,False
4zto,H,L,0,P,peptide,,epitope of rabbit monoclonal antibody r53,IMMUNE SYSTEM,05/14/15,Fab/epitope complex structure of rabbit monoclonal antibody R53 targeting an epitope in HIV-1 gp120 C4 region,ORYCTOLAGUS CUNICULUS; SYNTHETIC CONSTRUCT,oryctolagus cuniculus,oryctolagus cuniculus,human immunodeficiency virus 1,"Pan, R., Kong, X.-P.",2.3,X-RAY DIFFRACTION,0.223,0.167,False,True,IGHV1,IGKV1,Kappa,,,,,,4zto_H_L_P,False
5xj4,H,L,0,A,protein,,programmed cell death 1 ligand 1,IMMUNE SYSTEM,04/25/18,Complex structure of durvalumab-scFv/PD-L1,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Tan, S., Liu, K., Chai, Y., Gao, G.F., Qi, J.",2.3,X-RAY DIFFRACTION,0.240,0.216,True,True,IGHV3,IGKV3,Kappa,,,,,,5xj4_H_L_A,False
7mzm,H,L,0,A,protein,,spike protein s1,VIRAL PROTEIN,05/24/21,SARS-CoV-2 receptor binding domain bound to Fab PDI 215,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Pymm, P., Dietrich, M.H., Tan, L.L., Chan, L.J., Tham, W.H.",2.3,X-RAY DIFFRACTION,0.257,0.216,False,True,IGHV3,IGKV3,Kappa,,,,,,7mzm_H_L_A,False
8d6z,G,I,0,L,peptide,,spike protein s2 fusion peptide,IMMUNE SYSTEM,07/27/22,Crystal structure of SARS-CoV-2 spike stem fusion peptide in complex with neutralizing antibody COV91-27,Homo sapiens; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Lee, C.C.D., Lin, T.H., Yuan, M., Wilson, I.A.",2.3,X-RAY DIFFRACTION,0.279,0.235,False,True,IGHV3,IGKV3,Kappa,,,,,,8d6z_G_I_L,False
7yds,B,C,0,A,protein,,programmed cell death 1 ligand 1,IMMUNE SYSTEM,07/19/23,The structure of the bispecific antibody targeted PD-L1 and 4-1BB,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Gao, Y., Zhu, M., Liu, W.T., Cheng, L.S., Zhu, Z.L., Niu, L.W.",2.3,X-RAY DIFFRACTION,0.246,0.194,False,True,IGHV3,IGKV1,Kappa,,,,,,7yds_B_C_A,False
2dd8,H,L,0,S,protein,,spike glycoprotein,IMMUNE SYSTEM/VIRAL PROTEIN,01/24/06,Crystal Structure of SARS-CoV Spike Receptor-Binding Domain Complexed with Neutralizing Antibody,HOMO SAPIENS; SARS CORONAVIRUS,homo sapiens,homo sapiens,sars coronavirus,"Prabakaran, P., Gan, J.H., Feng, Y., Zhu, Z.Y., Xiao, X.D., Ji, X., Dimitrov, D.S.",2.3,X-RAY DIFFRACTION,0.261,0.199,False,True,IGHV1,IGLV3,Lambda,2e-08,-10.5,SPR,25.0,16597622,2dd8_H_L_S,False
3eyf,D,C,0,F,peptide,,synthetic peptide,IMMUNE SYSTEM,10/20/08,Crystal structure of anti-human cytomegalovirus antibody 8f9 plus gB peptide,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,,"Thomson, C.A., Bryson, S., McLean, G.R., Creagh, A.L., Pai, E.F., Schrader, J.W.",2.3,X-RAY DIFFRACTION,0.230,0.210,False,True,IGHV3,IGKV3,Kappa,9.4e-08,-9.3,ITC,24.0,18772881,3eyf_D_C_F,False
7beh,H,L,0,E,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,12/23/20,Crystal structure of the receptor binding domain of SARS-CoV-2 Spike glycoprotein in complex with COVOX-316 Fab,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, D., Zhao, Y., Ren, J., Stuart, D.",2.3,X-RAY DIFFRACTION,0.230,0.213,False,True,IGHV1,IGLV2,Lambda,,,,,,7beh_H_L_E,False
8db4,C,D,0,E,protein,,ara h 2 allergen,ALLERGEN/IMMUNE SYSTEM,01/25/23,Crystal structure of the peanut allergen Ara h 2 bound by two neutralizing antibodies 22S1 and 13T1,Arachis hypogaea; Homo sapiens,homo sapiens,homo sapiens,arachis hypogaea,"Min, J., Pedersen, L.C.",2.3,X-RAY DIFFRACTION,0.246,0.211,False,True,IGHV3,IGKV1,Kappa,,,,,,8db4_C_D_E,False
8dgv,H,L,0,A,peptide,,spike protein s2',IMMUNE SYSTEM,01/25/23,Crystal structure of MERS-CoV spike stem helix peptide in complex with Fab of broadly neutralizing antibody CC99.103 isolated from a vaccinated COVID-19 convalescent,Homo sapiens; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,middle east respiratory syndrome-relatedcoronavirus (isolate united kingdom/h123990006/2012) ,"Liu, H., Wilson, I.A.",2.3,X-RAY DIFFRACTION,0.249,0.203,False,True,IGHV1,IGKV3,Kappa,,,,,,8dgv_H_L_A,False
8xs1,H,L,0,A,peptide,,osteocalcin,IMMUNE SYSTEM,01/15/25,Crystal structure of Fab fragment of anti-osteocalcin antibody KTM219 complexed with C-terminal peptide antigen,Mus musculus; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Komatsu, M., Dong, J., Ueda, H., Arai, R.",2.3,X-RAY DIFFRACTION,0.248,0.199,False,True,IGHV1,IGKV1,Kappa,,,,,,8xs1_H_L_A,False
1ejo,H,L,0,P,peptide,,fmdv peptide,IMMUNE SYSTEM,03/03/00,FAB FRAGMENT OF NEUTRALISING MONOCLONAL ANTIBODY 4C4 COMPLEXED WITH G-H LOOP FROM FMDV.,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,,"Ochoa, W.F., Kalko, S.G., Gomes, P., Fita, I., Verdaguer, N.",2.3,X-RAY DIFFRACTION,0.262,0.248,False,False,IGHV5,IGKV3,Kappa,,,,,,1ejo_H_L_P,False
5kw9,H,L,0,A,protein,,capsid protein vp1,ANTIVIRAL PROTEIN,07/15/16,Structural Basis for Norovirus Neutralization by a HBGA Blocking Human IgA Antibody,NORWALK VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,norwalk virus,"Shanker, S., Prasad, B.V.V.",2.3,X-RAY DIFFRACTION,0.212,0.186,False,False,IGHV1,IGKV4,Kappa,2.05e-08,-10.488644352985895,BLI,,TBD,5kw9_H_L_A,False
6plk,I,M,0,F,protein,,env,ANTIVIRAL PROTEIN,07/01/19,Crystal structure of ZIKV-116 Fab in complex with ZIKV envelope DIII,HOMO SAPIENS; ZIKA VIRUS ZIKV/H. SAPIENS/FRENCHPOLYNESIA/10087PF/2013,homo sapiens,homo sapiens,zika virus zikv/h.sapiens/frenchpolynesia/10087pf/2013 ,"Zhao, H., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID)",2.3,X-RAY DIFFRACTION,0.211,0.167,False,True,IGHV3,IGKV1,Kappa,,,,,,6plk_I_M_F,False
2q8b,H,L,0,A,protein,,apical membrane antigen 1,Immune System,06/10/07,Structure of the malaria antigen AMA1 in complex with a growth-inhibitory antibody,PLASMODIUM FALCIPARUM; MUS MUSCULUS,mus musculus,mus musculus,plasmodium falciparum,"Gupta, A., Murphy, V.J., Anders, R.F., Batchelor, A.H.",2.3,X-RAY DIFFRACTION,0.256,0.209,False,False,IGHV14,IGKV6,Kappa,,,,,,2q8b_H_L_A,False
6iut,H,L,0,A,protein,,hemagglutinin,IMMUNE SYSTEM,11/30/18,Crystal structure of influenza A virus H5 hemagglutinin globular head in complex with the Fab of antibody AVFluIgG01,HOMO SAPIENS; INFLUENZA A VIRUS (A/ANHUI/1/2005(H5N1)),homo sapiens,homo sapiens,influenza a virus (a/anhui/1/2005(h5n1)),"Wang, P., Zuo, Y., Sun, J., Zhang, L., Wang, X.",2.3,X-RAY DIFFRACTION,0.255,0.205,False,True,IGHV4,IGLV2,Lambda,,,,,,6iut_H_L_A,False
2xra,H,L,0,A,protein,,transmembrane protein gp41,IMMUNE SYSTEM,09/13/10,crystal structure of the HK20 Fab in complex with a gp41 mimetic 5- Helix,SYNTHETIC CONSTRUCT; HOMO SAPIENS,homo sapiens,homo sapiens,synthetic construct,"Sabin, C., Corti, D., Buzon, V., Seaman, M.S., Lutje-Hulsik, D., Hinz, A., Vanzetta, F., Agatic, G., Silacci, C., Langedijk, J.P.M., Mainetti, L., Scarlatti, G., Sallusto, F., Weiss, R., Lanzavecchia, A., Weissenhorn, W.",2.3,X-RAY DIFFRACTION,0.27943,0.23693,False,False,IGHV1,IGKV1,Kappa,3.3e-09,-11.56,SPR,25.0,21124990,2xra_H_L_A,False
4xny,H,L,0,G,protein,,"envelope glycoprotein gp160,envelope glycoprotein gp160,envelope glycoprotein gp160 ",IMMUNE SYSTEM,01/16/15,Crystal structure of broadly and potently neutralizing antibody VRC08C in complex with HIV-1 clade A strain Q842.d12 gp120,HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Zhou, T., Srivatsan, S., Kwong, P.D.",2.3,X-RAY DIFFRACTION,0.217,0.182,False,True,unknown,IGKV3,Kappa,,,,,,4xny_H_L_G,False
6n6b,K,L,0,A,protein,,neuraminidase,VIRAL PROTEIN/Immune System,11/26/18,The complex crystal structure of neuraminidase from A/Minnesota/11/2010 with B10 antibody.,INFLUENZA A VIRUS (A/MINNESOTA/11/2010(H3N2)); MUS MUSCULUS,mus musculus,mus musculus,influenza a virus (a/minnesota/11/2010(h3n2)),"Yang, H., Stevens, J.",2.3,X-RAY DIFFRACTION,0.245,0.220,False,True,IGHV3,IGKV6,Kappa,,,,,,6n6b_K_L_A,False
7bei,H,L,0,E,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,12/23/20,Crystal structure of the receptor binding domain of SARS-CoV-2 Spike glycoprotein in complex with COVOX-150 Fab,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, D., Zhao, Y., Ren, J., Stuart, D.",2.3,X-RAY DIFFRACTION,0.232,0.184,False,True,IGHV3,IGKV1,Kappa,,,,,,7bei_H_L_E,False
8dfh,H,L,0,A,protein,,merozoite surface protein 1,STRUCTURAL PROTEIN/IMMUNE SYSTEM,10/12/22,Crystal structure of non-neutralizing / interfering human monoclonal antibody 42C3 Fab in complex with MSP1-19,Homo sapiens; Plasmodium falciparum 3D7,homo sapiens,homo sapiens,plasmodium falciparum 3d7,"Patel, P.N., Tang, W.K., Tolia, N.H.",2.3,X-RAY DIFFRACTION,0.233,0.209,False,True,IGHV3,IGLV1,Lambda,,,,,,8dfh_H_L_A,False
8xi6,H,I,0,C,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,04/24/24,SARS-CoV-2 Omicron BQ.1.1 Variant Spike Protein Complexed with MO11 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Ishimaru, H., Nishimura, M., Shigematsu, H., Marini, M.I., Hasegawa, N., Takamiya, R., Iwata, S., Mori, Y.",2.3,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV3,Lambda,,,,,,8xi6_H_I_C,False
6tyb,H,L,0,G,protein,,envelope glycoprotein gp160,IMMUNE SYSTEM,08/08/19,Isolation and Structure of an Antibody that Fully Neutralizes Isolate SIVmac239 Reveals Functional Similarity of SIV and HIV Glycan Shields,SIMIAN IMMUNODEFICIENCY VIRUS; MACACA MULATTA,macaca mulatta,macaca mulatta,simian immunodeficiency virus,"Gorman, J., Kwong, P.D.",2.301,X-RAY DIFFRACTION,0.210,0.178,False,True,IGHV5,IGKV1,Kappa,,,,,,6tyb_H_L_G,False
6fy2,X,Y,0,Z,peptide,,cap225 scaffolded v1v2,IMMUNE SYSTEM,03/10/18,"Crystal structure of a V2p-reactive RV144 vaccine-like antibody, CAP228-16H, in complex with a heterologous CAP225 V1V2",HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Wibmer, C.K., Moore, P.L., Morris, L.",2.301,X-RAY DIFFRACTION,0.217,0.190,False,True,IGHV5,IGLV3,Lambda,,,,,,6fy2_X_Y_Z,False
6n16,C,D,0,I,peptide,,hiv fusion peptide (512-519),IMMUNE SYSTEM,11/08/18,Vaccine-elicited NHP FP-targeting neutralizing antibody 0PV-b.01 in complex with HIV fusion peptide (residue 512-519),PLATYRRHINI; SYNTHETIC CONSTRUCT,platyrrhini,platyrrhini,human immunodeficiency virus 1,"Xu, K., Wang, Y., Kwong, P.D.",2.302,X-RAY DIFFRACTION,0.274,0.222,False,True,IGHV4,IGKV2,Kappa,,,,,,6n16_C_D_I,False
5tz2,H,L,0,C,protein,,leukocyte surface antigen cd47,IMMUNE SYSTEM,11/21/16,Crystal structure of human CD47 ECD bound to Fab of C47B222,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Cardoso, R.M.F.",2.302,X-RAY DIFFRACTION,0.255,0.201,False,True,IGHV5,IGKV3,Kappa,1.1200000000000003e-09,-12.211051408172032,SPR,,TBD,5tz2_H_L_C,False
4j8r,D,C,0,J,peptide,,major prion protein,IMMUNE SYSTEM,02/14/13,Structure of an octapeptide repeat of the prion protein bound to the POM2 Fab antibody fragment,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,mus musculus,"Swayampakula, M., Baral, P.K., Kav, N.N.V., Aguzzi, A., James, M.N.G.",2.303,X-RAY DIFFRACTION,0.257,0.247,False,False,IGHV1,IGKV6,Kappa,2e-08,-10.503274322962254,Unknown,,TBD,4j8r_D_C_J,False
4yhz,H,L,0,P,peptide,,h3k4me3 peptide,IMMUNE SYSTEM,02/27/15,Crystal structure of 304M3-B Fab in complex with H3K4me3 peptide,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,synthetic construct,"Hattori, T., Dementieva, I.S., Montano, S.P., Koide, S.",2.304,X-RAY DIFFRACTION,0.213,0.183,False,True,IGHV3,IGLV3,Lambda,1.1000000000000001e-08,-10.857482989210109,Unknown,,TBD,4yhz_H_L_P,False
8rwb,H,L,0,P,protein,,ul16-binding protein 6,IMMUNE SYSTEM,02/12/25,Crystal structure of ULBP6 in complex with a blocking antibody,Homo sapiens; synthetic construct,synthetic construct,synthetic construct,homo sapiens,"Bharill, S., Chen, I., Ivic, N., Bahrami Dizicheh, Z., Wu, Y., Doamekpor, S., Koenig, P., Fuh, G.",2.307,X-RAY DIFFRACTION,0.287,0.216,False,True,IGHV3,IGKV1,Kappa,,,,,,8rwb_H_L_P,False
4ydj,H,L,0,G,protein,,"envelope glycoprotein gp160,envelope glycoprotein gp160",IMMUNE SYSTEM,02/22/15,Crystal structure of broadly and potently neutralizing antibody 44-VRC13.01 in complex with HIV-1 clade AE strain 93TH057 gp120,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Zhou, T., Moquin, S., Kwong, P.D.",2.308,X-RAY DIFFRACTION,0.250,0.223,False,True,unknown,IGLV2,Lambda,,,,,,4ydj_H_L_G,False
7kez,H,L,0,V,protein,,isoform l-vegf206 of vascular endothelial growth factor a,IMMUNE SYSTEM,10/13/20,Crystal structure of bH1 Fab variant (CDR H3 loop design 16_0325) in complex with VEGF,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Shi, R., Manenda, M.S., Picard, M.-E.",2.31,X-RAY DIFFRACTION,0.235,0.178,False,True,IGHV3,IGKV1,Kappa,,,,,,7kez_H_L_V,False
6u6u,H,L,0,R,protein,,interleukin-1 receptor-like 2,CYTOKINE,08/30/19,IL36R extracellular domain in complex with BI655130 Fab,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Larson, E.T., Farrow, N.A.",2.31,X-RAY DIFFRACTION,0.202,0.179,False,True,IGHV1,IGKV3,Kappa,,,,,,6u6u_H_L_R,False
7bsc,H,L,0,A,protein,,non-structural protein 1,VIRAL PROTEIN/IMMUNE SYSTEM,03/30/20,Complex structure of 1G5.3 Fab bound to DENV2 NS1c,DENGUE VIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,dengue virus 2,"Song, H., Qi, J., Gao, F.G.",2.31,X-RAY DIFFRACTION,0.237,0.205,False,True,IGHV3,IGKV3,Kappa,,,,,,7bsc_H_L_A,False
8szy,A,B,0,T,protein,,t-cell immunoreceptor with ig and itim domains,"IMMUNE SYSTEM,PROTEIN BINDING",09/20/23,Crystal Structure of Heterotrimeric Anti-TIGIT Fabs in complex with human TIGIT,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Diong, S.J., Lee, P.S.",2.31,X-RAY DIFFRACTION,0.269,0.227,False,True,IGHV1,IGKV1,Kappa,,,,,,8szy_A_B_T,False
8szy,H,L,0,T,protein,,t-cell immunoreceptor with ig and itim domains,"IMMUNE SYSTEM,PROTEIN BINDING",09/20/23,Crystal Structure of Heterotrimeric Anti-TIGIT Fabs in complex with human TIGIT,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Diong, S.J., Lee, P.S.",2.31,X-RAY DIFFRACTION,0.269,0.227,False,True,IGHV4,IGKV3,Kappa,,,,,,8szy_H_L_T,False
8f6o,A,B,0,C,protein,,b- and t-lymphocyte attenuator,IMMUNE SYSTEM,05/24/23,anti-BTLA monoclonal antibody h22B3 in complex with BTLA,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Hendle, J., Atwell, S., Lieu, R., Hickey, M., Weichert, K.",2.31,X-RAY DIFFRACTION,0.266,0.215,False,True,IGHV1,IGKV3,Kappa,,,,,,8f6o_A_B_C,False
7yxu,H,L,0,A,protein,,tumor necrosis factor receptor superfamily member 9,IMMUNE SYSTEM,01/25/23,Crystal structure of agonistic antibody 1618 fab domain bound to human 4-1BB.,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Hakansson, M., Rose, N., Petersson, J., Enell Smith, K., Thorolfsson, M., von Schantz, L.",2.31,X-RAY DIFFRACTION,0.252,0.205,False,True,IGHV3,IGKV1,Kappa,,,,,,7yxu_H_L_A,False
6mft,A,B,0,C,protein,,gp120,IMMUNE SYSTEM/VIRAL PROTEIN,09/12/18,Crystal structure of glycosylated 426c HIV-1 gp120 core G459C in complex with glVRC01 A60C heavy chain,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Weidle, C., Pancera, M., Stamatatos, L., Gray, M.",2.315,X-RAY DIFFRACTION,0.295,0.244,False,True,IGHV1,IGKV3,Kappa,2.3e-06,-7.691979474199363,SPR,,TBD,6mft_A_B_C,False
6jep,H,L,0,E,protein,,genome polyprotein,ANTIVIRAL PROTEIN,02/07/19,Structure of a neutralizing antibody bound to the Zika envelope protein domain III,HOMO SAPIENS; ZIKA VIRUS,homo sapiens,homo sapiens,zika virus,"Wang, L., Wang, R.K., Wang, L., Ben, H.J., Yu, L., Gao, F., Shi, X.L., Yin, C.B., Zhang, F.C., Xiang, Y., Zhang, L.Q.",2.316,X-RAY DIFFRACTION,0.219,0.166,False,True,IGHV1,IGLV1,Lambda,,,,,,6jep_H_L_E,False
2h9g,B,A,0,R,protein,,tumor necrosis factor receptor superfamily member 10bprecursor ,IMMUNE SYSTEM/APOTOSIS,06/09/06,Crystal structure of phage derived Fab BdF1 with human Death Receptor 5 (DR5),HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Hymowitz, S.G., Compaan, D.M.",2.32,X-RAY DIFFRACTION,0.282,0.228,False,True,IGHV3,IGKV1,Kappa,5e-09,-11.32,SPR,,16859704,2h9g_B_A_R,False
5vzy,H,L,0,A,peptide,,amyloid beta a4 protein,IMMUNE SYSTEM,05/29/17,Crystal structure of crenezumab Fab in complex with Abeta,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Ultsch, M., Wang, W.",2.32,X-RAY DIFFRACTION,0.249,0.206,False,True,IGHV3,IGKV1,Kappa,3.2e-09,-11.589048932503635,Unknown,,TBD,5vzy_H_L_A,False
6a0z,H,L,0,A,protein,,"hemagglutinin,envelope glycoprotein",VIRAL PROTEIN/IMMUNE SYSTEM,06/06/18,"Crystal structure of broadly neutralizing antibody 13D4 bound to H5N1 influenza hemagglutinin, HA head region",INFLUENZA A VIRUS; HUMAN IMMUNODEFICIENCY VIRUS 1; MUS MUSCULUS,mus musculus,mus musculus,"influenza a virus, human immunodeficiency virus1 ","Li, S., Li, T.",2.329,X-RAY DIFFRACTION,0.218,0.172,False,False,IGHV1,IGKV6,Kappa,5.300000000000001e-08,-9.925863641076688,SPR,,TBD,6a0z_H_L_A,False
7tp3,H,L,0,Z,protein,,spike protein s1,IMMUNE SYSTEM,01/24/22,Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody K288.2,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; MACACA MULATTA,macaca mulatta,macaca mulatta,severe acute respiratory syndrome coronavirus2 ,"Yuan, M., Zhu, X., Wilson, I.A.",2.33,X-RAY DIFFRACTION,0.231,0.185,False,True,IGHV3,IGKV3,Kappa,,,,,,7tp3_H_L_Z,False
8cbf,H,L,0,E,protein,,spike protein s1,VIRAL PROTEIN,02/07/24,SARS-CoV-2 Delta-RBD complexed with Omi-42 and Beta-49 Fabs,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, D., Ren, J., Stuart, D.I.",2.33,X-RAY DIFFRACTION,0.255,0.215,False,True,IGHV3,IGLV2,Lambda,,,,,,8cbf_H_L_E,False
6a67,C,D,0,B,protein,,hemagglutinin,IMMUNE SYSTEM,06/26/18,Crystal structure of influenza A virus H5 hemagglutinin globular head in complex with the Fab of antibody FLD21.140,HOMO SAPIENS; INFLUENZA A VIRUS (A/THAILAND/1(KAN-1)/2004(H5N1)),homo sapiens,homo sapiens,influenza a virus (a/thailand/1(kan-1)/2004(h5n1)) ,"Wang, P., Zuo, Y., Sun, J., Zhang, L., Wang, X.",2.33,X-RAY DIFFRACTION,0.235,0.197,False,True,IGHV4,IGLV1,Lambda,1.004e-09,-12.275831597239875,SPR,,TBD,6a67_C_D_B,False
6iuv,H,L,0,A,protein,,hemagglutinin,IMMUNE SYSTEM,11/30/18,Crystal structure of influenza A virus H5 hemagglutinin globular head in complex with the Fab of antibody 3C11,INFLUENZA A VIRUS (A/HONG KONG/482/97(H5N1)); HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus (a/hong kong/482/97(h5n1)),"Wang, P., Zuo, Y., Sun, J., Zhang, L., Wang, X.",2.332,X-RAY DIFFRACTION,0.246,0.207,False,True,IGHV5,IGKV2,Kappa,,,,,,6iuv_H_L_A,False
6mtj,H,L,0,G,protein,,envelope glycoprotein gp160,IMMUNE SYSTEM/INHIBITOR,10/19/18,Crystal Structure of HIV-1 BG505 SOSIP.664 Prefusion Env Trimer Bound to Small Molecule HIV-1 Entry Inhibitor BMS-378806 in Complex with Human Antibodies 3H109L and 35O22 at 2.9 Angstrom,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Lai, Y.-T., Kwong, P.D.",2.336,X-RAY DIFFRACTION,0.282,0.233,False,True,IGHV4,unknown,unknown,,,,,,6mtj_H_L_G,False
6mtj,D,E,0,B,protein,,envelope glycoprotein gp160,IMMUNE SYSTEM/INHIBITOR,10/19/18,Crystal Structure of HIV-1 BG505 SOSIP.664 Prefusion Env Trimer Bound to Small Molecule HIV-1 Entry Inhibitor BMS-378806 in Complex with Human Antibodies 3H109L and 35O22 at 2.9 Angstrom,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Lai, Y.-T., Kwong, P.D.",2.336,X-RAY DIFFRACTION,0.282,0.233,False,True,unknown,unknown,unknown,,,,,,6mtj_D_E_B,False
1n64,H,L,0,P,peptide,,genome polyprotein capsid protein c,IMMUNE SYSTEM,11/08/02,Crystal structure analysis of the immunodominant antigenic site on Hepatitis C virus protein bound to mAb 19D9D6,MUS MUSCULUS; SYNTHETIC CONSTRUCT,,mus musculus,,"Menez, R., Bossus, M., Muller, B., Sibai, G., Dalbon, P., Ducancel, F., Jolivet-Reynaud, C., Stura, E.",2.34,X-RAY DIFFRACTION,0.245,0.190,False,True,IGHV9,IGKV8,Kappa,1.3e-09,-12.12,SPR,,12574359,1n64_H_L_P,False
8hpf,M,N,0,A,protein,,spike protein s2',IMMUNE SYSTEM/VIRAL PROTEIN,12/20/23,Cryo-EM structure of SARS-CoV-2 Omicron BA.2 RBD in complex with fab L4.65 and L5.34,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Gao, G.F., Liu, S.",2.34,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8hpf_M_N_A,False
7or9,H,L,0,E,protein,,spike protein s1,VIRAL PROTEIN,06/04/21,Crystal structure of the receptor binding domain of SARS-CoV-2 Spike glycoprotein in complex with COVOX-222 and COVOX-278 Fabs,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, D., Ren, J., Stuart, D.I.",2.34,X-RAY DIFFRACTION,0.230,0.194,False,True,IGHV1,IGKV1,Kappa,,,,,,7or9_H_L_E,False
5veb,H,L,0,Y,protein,,cadherin-6,IMMUNE SYSTEM,04/04/17,Crystal structure of a Fab binding to extracellular domain 5 of Cadherin-6,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Zhu, X., Bialucha, C.U., London, A., Clark, K., Hu, T.",2.34,X-RAY DIFFRACTION,0.252,0.212,False,False,IGHV3,IGKV1,Kappa,,,,,,5veb_H_L_Y,False
8hpf,H,L,0,A,protein,,spike protein s2',IMMUNE SYSTEM/VIRAL PROTEIN,12/20/23,Cryo-EM structure of SARS-CoV-2 Omicron BA.2 RBD in complex with fab L4.65 and L5.34,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Gao, G.F., Liu, S.",2.34,ELECTRON MICROSCOPY,,,False,True,IGHV2,IGKV3,Kappa,,,,,,8hpf_H_L_A,False
6xc4,H,L,0,A,protein,,spike protein s1,IMMUNE SYSTEM/VIRAL PROTEIN,06/08/20,Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody CC12.3,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Yuan, M., Liu, H., Wu, N.C., Zhu, X., Wilson, I.A.",2.341,X-RAY DIFFRACTION,0.219,0.184,False,True,IGHV3,IGKV3,Kappa,,,,,,6xc4_H_L_A,False
7rxj,H,L,0,I,protein,,circumsporozoite protein,IMMUNE SYSTEM,08/23/21,Fab236 in complex with the C-terminal alpha-TSR domain of P. falciparum,HOMO SAPIENS; PLASMODIUM FALCIPARUM (ISOLATE 3D7),homo sapiens,homo sapiens,plasmodium falciparum (isolate 3d7),"Pholcharee, T., Oyen, D., Wilson, I.A.",2.345,X-RAY DIFFRACTION,0.249,0.218,False,True,IGHV3,IGLV3,Lambda,,,,,,7rxj_H_L_I,False
6wo4,H,L,0,E,protein,,envelope glycoprotein e2,IMMUNE SYSTEM,04/24/20,Structure of Hepatitis C Virus Envelope Glycoprotein E2 core from genotype 6a bound to broadly neutralizing antibody HC11,HOMO SAPIENS; RECOMBINANT HEPATITIS C VIRUS HK6A/JFH-1,homo sapiens,homo sapiens,recombinant hepatitis c virus hk6a/jfh-1,"Tzarum, N., Wilson, I.A., Law, M.",2.349,X-RAY DIFFRACTION,0.236,0.209,False,True,IGHV1,IGKV3,Kappa,,,,,,6wo4_H_L_E,False
8fbw,C,D,0,E,peptide,,siv v2 peptide,IMMUNE SYSTEM/VIRAL PROTEIN,01/18/23,Crystal structure of SIV-1 V2 antibody NCI05 in complex with a V2 peptide,Macaca mulatta; SYNTHETIC CONSTRUCT,macaca mulatta,macaca mulatta,simian immunodeficiency virus,"Zhou, T., Kwong, P.D., Van Wazer, D.",2.35,X-RAY DIFFRACTION,0.246,0.194,False,True,IGHV3,IGLV1,Lambda,,,,,,8fbw_C_D_E,False
8st4,G,F,0,C,protein,,neuronal acetylcholine receptor subunit beta-2,TRANSPORT PROTEIN,02/07/24,The 2alpha3beta stoichiometry of human alpha4beta2 nicotinic acetylcholine receptor in complex with acetylcholine,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Kang, G., Hibbs, R.E.",2.35,ELECTRON MICROSCOPY,,,False,False,IGHV1,IGKV1,Kappa,,,,,,8st4_G_F_C,False
7bnv,H,L,0,A,protein,,surface glycoprotein,VIRAL PROTEIN,01/22/21,Crystal Structure of the SARS-CoV-2 Receptor Binding Domain in Complex with Antibody ION-300,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Hall, G., Cowan, R., Carr, M.",2.35,X-RAY DIFFRACTION,0.265,0.224,False,True,IGHV5,IGKV3,Kappa,,,,,,7bnv_H_L_A,False
7wn2,H,L,0,R,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,04/19/23,Crystal structure of SARS-CoV-2 spike receptor-binding domain (RBD) in complex with NCV2SG53 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Yamamoto, A., Higashiura, A.",2.35,X-RAY DIFFRACTION,0.279,0.228,False,True,IGHV3,IGKV1,Kappa,,,,,,7wn2_H_L_R,False
6x78,B,A,0,I,peptide,,hiv fusion peptide 512-519 v2,IMMUNE SYSTEM/VIRAL PROTEIN,05/29/20,Vaccine-elicited mouse FP-targeting neutralizing antibody vFP48.03 in complex with HIV fusion peptide (residue 512-519),MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,human immunodeficiency virus 1,"Xu, K., Kwong, P.D.",2.359,X-RAY DIFFRACTION,0.226,0.178,False,True,IGHV1,IGKV1,Kappa,,,,,,6x78_B_A_I,False
8fg0,A,B,0,Q,peptide,,circumsporozoite protein,IMMUNE SYSTEM,05/10/23,"Crystal structure of the 3764 Fab in complex with the C-terminal PfCSP linker, PfCSP281-294.",Homo sapiens; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,plasmodium falciparum,"Burn Aschner, C., Julien, J.P.",2.36,X-RAY DIFFRACTION,0.237,0.176,False,True,IGHV3,IGKV2,Kappa,,,,,,8fg0_A_B_Q,False
8hws,D,E,0,A,protein,,spike protein s2',IMMUNE SYSTEM/VIRAL PROTEIN,12/06/23,"The complex structure of Omicron BA.4 RBD with BD604, S309, and S304",Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"He, Q.W., Xu, Z.P., Xie, Y.F.",2.36,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8hws_D_E_A,False
8ath,E,F,0,B,protein,,lysosome-associated membrane glycoprotein 1,PROTEIN BINDING,03/01/23,CRYSTAL STRUCTURE OF LAMP1 IN COMPLEX WITH FAB-B.,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Mathieu, M., Dupuy, A.",2.366,X-RAY DIFFRACTION,0.290,0.251,False,True,IGHV1,IGKV19,Kappa,,,,,,8ath_E_F_B,False
8ath,H,L,0,A,protein,,lysosome-associated membrane glycoprotein 1,PROTEIN BINDING,03/01/23,CRYSTAL STRUCTURE OF LAMP1 IN COMPLEX WITH FAB-B.,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Mathieu, M., Dupuy, A.",2.366,X-RAY DIFFRACTION,0.290,0.251,False,True,IGHV1,IGKV19,Kappa,,,,,,8ath_H_L_A,False
8cwk,A,B,0,C,protein,,spike protein s1,IMMUNE SYSTEM,05/24/23,Fab arm of antibodies 4G1-C2 and 10G4 bound to CoV-2 receptor binding domain (RBD),Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Langley, D.B., Christ, D.",2.368,X-RAY DIFFRACTION,0.223,0.186,False,True,IGHV3,IGKV1,Kappa,,,,,,8cwk_A_B_C,False
8r1d,H,L,0,A,protein,,"spike glycoprotein,fibritin",VIRAL PROTEIN,03/13/24,SD1-3 Fab in complex with SARS-CoV-2 BA.2.12.1 Spike Glycoprotein,Enterobacteria phage T4; Homo sapiens,homo sapiens,homo sapiens,"homo sapiens, enterobacteria phage t4","Duyvesteyn, H.M.E., Ren, J., Stuart, D.I.",2.37,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV3,Lambda,,,,,,8r1d_H_L_A,False
9ccj,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,03/12/25,Dissecting human monoclonal antibody responses from mRNA and protein-based booster vaccinations against XBB1.5 SARS-CoV-2,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Bajic, G., Civljak, A.",2.37,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGLV3,Lambda,,,,,,9ccj_H_L_A,False
8zhq,D,A,0,E,protein,,envelopment polyprotein,VIRAL PROTEIN,01/08/25,SFTSV Gn in complex with JK-8/12 Fab,Homo sapiens; Severe fever with thrombocytopenia syndrome virus,homo sapiens,homo sapiens,severe fever with thrombocytopenia syndromevirus ,"Shang, H., Guo, Y., Zhang, N., Liu, W., Li, H.",2.37,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGLV3,Lambda,,,,,,8zhq_D_A_E,False
8zhq,C,B,0,E,protein,,envelopment polyprotein,VIRAL PROTEIN,01/08/25,SFTSV Gn in complex with JK-8/12 Fab,Homo sapiens; Severe fever with thrombocytopenia syndrome virus,homo sapiens,homo sapiens,severe fever with thrombocytopenia syndromevirus ,"Shang, H., Guo, Y., Zhang, N., Liu, W., Li, H.",2.37,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8zhq_C_B_E,False
7u5b,H,L,0,I,protein,,kallikrein-5,HYDROLASE/IMMUNE SYSTEM,12/14/22,Structure of Human KLK5 bound to anti-KLK5 Fab,Homo sapiens; synthetic construct,synthetic construct,synthetic construct,homo sapiens,"Yin, J., Sudhamsu, J.",2.371,X-RAY DIFFRACTION,0.270,0.222,False,True,IGHV3,IGKV1,Kappa,,,,,,7u5b_H_L_I,False
4yr6,A,B,0,C,peptide,,ace-lys-leu-arg-gly-val-leu-gln-gly-his-leu,IMMUNE SYSTEM,03/14/15,Fab fragment of 5G6 in complex with epitope peptide,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Tao, Y., Mo, X., Li, R.",2.38,X-RAY DIFFRACTION,0.251,0.212,False,False,IGHV8,IGKV12,Kappa,,,,,,4yr6_A_B_C,False
6wo3,H,L,0,E,protein,,envelope glycoprotein e2,IMMUNE SYSTEM/Viral Protein,04/24/20,Structure of Hepatitis C Virus Envelope Glycoprotein E2 core from genotype 6a bound to broadly neutralizing antibody U1,RECOMBINANT HEPATITIS C VIRUS HK6A/JFH-1; HOMO SAPIENS,homo sapiens,homo sapiens,recombinant hepatitis c virus hk6a/jfh-1,"Tzarum, N., Wilson, I.A., Law, M.",2.382,X-RAY DIFFRACTION,0.260,0.230,False,True,IGHV1,IGKV1,Kappa,,,,,,6wo3_H_L_E,False
6bf4,H,L,0,G,protein,,hiv-1 clade ae gp120 core,viral protein/immune system,10/25/17,Crystal Structure of HIV-1 Clade AE Strain CNE55 gp120 Core in Complex with Neutralizing Antibody VRC-PG05 that Targets the Center of the Silent Face on the Outer Domain of gp120,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Zhou, T., Kwong, P.D.",2.382,X-RAY DIFFRACTION,0.228,0.192,False,True,IGHV3,IGKV4,Kappa,1.78e-07,-9.20807461785177,SPR,,TBD,6bf4_H_L_G,False
6co3,H,L,0,Q,peptide,,ala-glu-phe-arg-his-asp,IMMUNE SYSTEM,03/10/18,aducanumab abeta complex,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Arndt, J.W.",2.384,X-RAY DIFFRACTION,0.235,0.181,False,True,IGHV3,IGKV1,Kappa,,,,,,6co3_H_L_Q,False
6ohg,C,B,0,A,protein,,gametocyte surface protein p230,IMMUNE SYSTEM,06/17/20,Structure of Plasmodium falciparum vaccine candidate Pfs230D1M in complex with the Fab of a transmission blocking antibody,PLASMODIUM FALCIPARUM; MUS MUSCULUS,mus musculus,mus musculus,plasmodium falciparum,"Garboczi, D.N., Singh, K., Gittis, A.G.",2.385,X-RAY DIFFRACTION,0.277,0.229,False,True,IGHV1,IGKV5,Kappa,,,,,,6ohg_C_B_A,False
7q0i,H,L,0,C,protein,,spike protein s1,VIRAL PROTEIN,10/14/21,Crystal structure of the N-terminal domain of SARS-CoV-2 beta variant spike glycoprotein in complex with Beta-43,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, D., Ren, J., Stuart, D.I.",2.39,X-RAY DIFFRACTION,0.242,0.202,False,True,IGHV3,IGLV3,Lambda,,,,,,7q0i_H_L_C,False
6wx2,A,B,0,C,peptide,,fusion peptide,IMMUNE SYSTEM/VIRAL PROTEIN,05/09/20,Vaccine-elicited mouse FP-targeting neutralizing antibody vFP16.02 with F60P mutation on light chain in complex with HIV fusion peptide (residue 512-519),MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,human immunodeficiency virus 1,"Xu, K., Wang, Y., Kwong, P.D.",2.39,X-RAY DIFFRACTION,0.250,0.200,False,True,IGHV1,IGKV1,Kappa,,,,,,6wx2_A_B_C,False
8qcm,F,E,0,A,protein,,broad substrate specificity atp-binding cassettetransporter abcg2 ,TRANSPORT PROTEIN,11/06/24,ABCG2 in complex with MZ82 and 5D3 Fab,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Yu, Q., Kowal, J., Ni, D., Stahlberg, H., Tajkhorshid, E., Altmann, K.H., Locher, K.P.",2.39,ELECTRON MICROSCOPY,,,False,False,IGHV3,IGKV13,Kappa,,,,,,8qcm_F_E_A,False
8ror,H,L,0,1,protein,,adhesin p1,CELL ADHESION,03/05/25,Single-particle cryo-EM of Mycoplasma pneumoniae adhesin P1 complexed with the anti-adhesive Fab fragment.,Mus musculus; Mycoplasmoides pneumoniae M129,mus musculus,mus musculus,mycoplasmoides pneumoniae m129,"Kawamoto, A., Vizarraga, D., Marcos-Silva, M., Fita, I., Miyata, M., Pinyol, J., Namba, K., Kenri, T.",2.39,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,8ror_H_L_1,False
9vx3,D,E,0,F,peptide,,polyhistidine peptide,IMMUNE SYSTEM,12/17/25,Crystal structure of the peptide-bound form of HisMab-1 Fv-clasp,Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT,"mus musculus, homo sapiens","mus musculus, homo sapiens",synthetic construct,"Hitomi, N., Harada-Hikita, A., Arimori, T.",2.39,X-RAY DIFFRACTION,0.237,0.196,False,True,IGHV1,IGKV8,Kappa,,,,,,9vx3_D_E_F,False
7djz,A,B,0,C,protein,,spike protein s1,IMMUNE SYSTEM/VIRAL PROTEIN,11/22/20,Crystal structure of SARS-CoV-2 Spike RBD in complex with MW01 Fab,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Wang, J., Jiao, S., Wang, R., Zhang, J., Zhang, M., Wang, M.",2.397,X-RAY DIFFRACTION,0.230,0.183,False,True,IGHV1,IGKV3,Kappa,,,,,,7djz_A_B_C,False
8uky,B,A,0,D,protein,,bcl-2 homologous antagonist/killer,APOPTOSIS/INHIBITOR,04/10/24,Crystal structure of BAK in complex with inhibiting antibody 14G6,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Miller, M.S., Czabotar, P.E.",2.398,X-RAY DIFFRACTION,0.252,0.215,False,True,IGHV1,IGKV6,Kappa,,,,,,8uky_B_A_D,False
7um3,I,M,0,B,peptide,,d1 domain loop peptide from lymphocyte activation gene 3protein ,IMMUNE SYSTEM,09/07/22,Crystal structure of a Fab in complex with a peptide derived from the LAG-3 D1 domain loop insertion,Homo sapiens; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,homo sapiens,"Zorn, J.A., Lee, P.S., Rajpal, A., Strop, P.",2.3983,X-RAY DIFFRACTION,0.265,0.206,False,True,IGHV4,IGKV3,Kappa,,,,,,7um3_I_M_B,False
6cez,H,L,0,P,peptide,,hiv-1 gp120 v2 peptide con b,IMMUNE SYSTEM,02/13/18,Crystal Structure of Rabbit Anti-HIV-1 gp120 V2 Fab 16C2 in complex with V2 peptide ConB,ORYCTOLAGUS CUNICULUS; SYNTHETIC CONSTRUCT,oryctolagus cuniculus,oryctolagus cuniculus,human immunodeficiency virus 1,"Kong, X., Pan, R.",2.399,X-RAY DIFFRACTION,0.296,0.237,False,True,IGHV1,IGKV1,Kappa,,,,,,6cez_H_L_P,False
6pcu,F,E,0,D,protein,,outer capsid protein vp4,viral protein/immune system,06/18/19,VP8* of a G2P[4] human rotavirus in complex with scFv antibody 9,ROTAVIRUS A; HOMO SAPIENS,homo sapiens,homo sapiens,rotavirus a,"Hu, L., Venkataram Prasad, B.V.",2.4,X-RAY DIFFRACTION,0.237,0.186,False,True,IGHV4,IGLV9,Lambda,,,,,,6pcu_F_E_D,False
5dsc,E,F,0,M,peptide,,peptide,IMMUNE SYSTEM,09/17/15,Context-independent anti-hypusine antibody FabHpu24.B in complex with hypusine,ORYCTOLAGUS CUNICULUS; SYNTHETIC CONSTRUCT,oryctolagus cuniculus,oryctolagus cuniculus,synthetic construct,"Zhai, Q., Carter, P.J.",2.4,X-RAY DIFFRACTION,0.248,0.207,False,True,IGHV1,IGKV1,Kappa,,,,,,5dsc_E_F_M,False
6u9s,A,B,0,C,protein,,cd81 antigen,CELL ADHESION,05/13/20,Crystal structure of human CD81 large extracellular loop in complex with 5A6 Fab,MUS MUSCULUS; HOMO SAPIENS,mus musculus,mus musculus,homo sapiens,"Susa, K.J., Seegar, T.C.M., Blacklow, S.C.B., Kruse, A.C.",2.4,X-RAY DIFFRACTION,0.281,0.214,False,True,IGHV7,IGKV2,Kappa,,,,,,6u9s_A_B_C,False
6axl,D,C,0,G,peptide,,peptide ace-asn-pro-asn-ala-asn-pro-asn-ala-asn-pro-asn-ala-nh2 ,IMMUNE SYSTEM,09/07/17,Crystal structure of Fab317 complex,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,plasmodium falciparum,"Oyen, D., Wilson, I.A.",2.4,X-RAY DIFFRACTION,0.217,0.175,False,True,IGHV3,IGKV1,Kappa,7.8e-08,-9.696917926366758,Unknown,,TBD,6axl_D_C_G,False
6kz0,E,F,0,D,protein,,genome polyprotein,VIRAL PROTEIN,05/27/20,HRV14 3C in complex with single chain antibody GGVV,HUMAN RHINOVIRUS 14; HOMO SAPIENS,homo sapiens,homo sapiens,human rhinovirus 14,"Meng, B., Yang, B., Wilson, I.A.",2.4,X-RAY DIFFRACTION,0.223,0.185,False,True,IGHV1,IGKV1,Kappa,,,,,,6kz0_E_F_D,False
2y07,H,L,0,P,peptide,,phage display derived antigen,IMMUNE SYSTEM,11/30/10,CRYSTAL STRUCTURE ANALYSIS OF THE ANTI-(4-HYDROXY-3-NITROPHENYL) - ACETYL MURINE GERMLINE MONOCLONAL ANTIBODY BBE6.12H3 FAB FRAGMENT IN  COMPLEX WITH A PHAGE DISPLAY DERIVED DODECAPEPTIDE PPYPAWHAPGNI,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,synthetic construct,"Khan, T., Salunke, D.M.",2.4,X-RAY DIFFRACTION,0.2572,0.2344,False,False,IGHV1,IGLV1,Lambda,6e-07,-8.488120381868695,Unknown,,TBD,2y07_H_L_P,False
4web,H,L,0,E,protein,,hepatitis c virus envelope glycoprotein 2,IMMUNE SYSTEM/VIRAL PROTEIN,09/09/14,Structure of the core ectodomain of the hepatitis C virus envelope glycoprotein 2,HEPATITIS C VIRUS SUBTYPE 2A; MUS MUSCULUS,mus musculus,mus musculus,hepatitis c virus subtype 2a,"Khan, A.G., Whidby, J., Miller, M.T., Scarborough, H., Zatorski, A.V., Cygan, A., Price, A.A., Yost, S.A., Bohannon, C.D., Jacob, J., Grakoui, A., Marcotrigiano, J.",2.4,X-RAY DIFFRACTION,0.259,0.199,False,True,IGHV14,IGKV8,Kappa,,,,,,4web_H_L_E,False
6azz,F,E,0,D,protein,,pfs25,IMMUNE SYSTEM,09/13/17,Crystal structure of Pfs25 in complex with the transmission blocking antibody 1190,HOMO SAPIENS; PLASMODIUM FALCIPARUM,homo sapiens,homo sapiens,plasmodium falciparum,"Scally, S.W., McLeod, B., Bosch, A., King, C.R., Julien, J.P.",2.4,X-RAY DIFFRACTION,0.217,0.191,False,True,IGHV1,IGLV3,Lambda,6.7e-09,-11.151229137696946,BLI,,TBD,6azz_F_E_D,False
5iq9,H,L,0,P,peptide,,gp41 mper peptide,IMMUNE SYSTEM,03/10/16,Crystal structure of 10E8v4 Fab in complex with an HIV-1 gp41 peptide.,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Ofek, G., Kwon, Y.D., Caruso, W., Kwong, P.D.",2.4,X-RAY DIFFRACTION,0.236,0.191,False,True,IGHV3,IGLV3,Lambda,,,,,,5iq9_H_L_P,False
8vgk,F,E,0,C,protein,,tryptase alpha/beta-1,HYDROLASE/IMMUNE SYSTEM,10/30/24,CryoEM structure of tryptase in complex with engineered conformationally rigid anti-tryptase Fab E104.v1.6DS,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Kung, J.E., Johnson, M.C., Sudhamsu, J.",2.4,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV1,Kappa,,,,,,8vgk_F_E_C,False
4ffv,D,C,0,B,protein,,dipeptidyl peptidase 4,"HYDROLASE/Immune System, INHIBITOR",06/01/12,"Crystal Structure of Dipeptidyl Peptidase IV (DPP4, DPP-IV, CD26) in Complex with 11A19 Fab",RATTUS NORVEGICUS; MUS MUSCULUS,mus musculus,mus musculus,rattus norvegicus,"Wang, Z., Sudom, A., Walker, N.P., Min, X.",2.4,X-RAY DIFFRACTION,0.301,0.271,False,False,IGHV1,IGKV4,Kappa,,,,,,4ffv_D_C_B,False
5lwy,H,L,0,A,protein,,adiponectin receptor protein 2,MEMBRANE PROTEIN,09/19/16,Revised crystal structure of the human adiponectin receptor 2 in complex with a C18 free fatty acid,HOMO SAPIENS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Leyrat, C., Vasiliauskaite-Brooks, I., Granier, S.",2.4,X-RAY DIFFRACTION,0.224,0.198,False,True,IGHV1,IGKV12,Kappa,,,,,,5lwy_H_L_A,False
9ml8,P,Q,0,D,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,06/04/25,Crystal structure of the SARS-CoV-2 RBD in complex with the rabbit M8b-B1 Fab,Oryctolagus cuniculus; Severe acute respiratory syndrome coronavirus 2,oryctolagus cuniculus,oryctolagus cuniculus,severe acute respiratory syndrome coronavirus2 ,"Fan, C., Bjorkman, P.J.",2.4,X-RAY DIFFRACTION,0.247,0.223,False,True,IGHV1,IGKV1,Kappa,,,,,,9ml8_P_Q_D,False
5wna,C,D,0,A,peptide,,major surface glycoprotein g,VIRAL PROTEIN/IMMUNE SYSTEM,07/31/17,Structure of antibody 3D3 bound to the central conserved region of RSV G,HOMO SAPIENS; HUMAN RESPIRATORY SYNCYTIAL VIRUS A,homo sapiens,homo sapiens,human respiratory syncytial virus a,"Fedechkin, S.O., George, N.L., Wolff, J.T., Kauvar, L.M., DuBois, R.M.",2.4,X-RAY DIFFRACTION,0.246,0.192,False,True,IGHV3,IGKV3,Kappa,,,,,,5wna_C_D_A,False
8a94,R,O,0,A,protein,,sars-cov2 spike in 2-up conformation in complex with fab47,VIRAL PROTEIN,05/03/23,SARS CoV2 Spike in the 2-up state in complex with Fab47,Homo sapiens; Severe acute respiratory syndrome coronavirus,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus,"Hallberg, B.M., Das, H.",2.4,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,8a94_R_O_A,False
7mzj,N,M,0,B,protein,,spike protein s1,VIRAL PROTEIN,05/24/21,SARS-CoV-2 receptor binding domain bound to Fab WCSL 129 and Fab PDI 93,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Pymm, P., Dietrich, M.H., Tan, L.L., Chan, L.J., Tham, W.H.",2.4,X-RAY DIFFRACTION,0.268,0.222,False,True,IGHV3,IGKV1,Kappa,,,,,,7mzj_N_M_B,False
4ene,C,D,0,A,protein,,h(+)/cl(-) exchange transporter clca,TRANSPORT PROTEIN,04/13/12,Structure of the N- and C-terminal trimmed ClC-ec1 Cl-/H+ antiporter and Fab Complex,ESCHERICHIA COLI K-12; MUS MUSCULUS,mus musculus,mus musculus,escherichia coli k-12,"Hyun-Ho Lim, Shane, T., Miller, C.",2.4,X-RAY DIFFRACTION,0.278,0.239,False,True,IGHV4,IGKV4,Kappa,,,,,,4ene_C_D_A,False
7joo,H,L,0,C,protein,,inducible t-cell costimulator,IMMUNE SYSTEM,08/06/20,Crystal structure of ICOS in complex with antibody STIM003 and anti-kappa VHH domain,LAMA GLAMA; HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Rujas, E., Sicard, T., Julien, J.P.",2.4,X-RAY DIFFRACTION,0.297,0.241,False,True,IGHV3,IGKV3,Kappa,,,,,,7joo_H_L_C,False
4s1q,H,L,0,G,protein,,hiv-1 gp120 core,VIRAL PROTEIN/IMMUNE SYSTEM,01/14/15,"Crystal structure of a VRC01-lineage antibody, 45-VRC01.H03+06.D-001739, in complex with clade A/E HIV-1 gp120 core",HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Kwon, Y.D., Yang, Y., Zhang, B., Kwong, P.D.",2.4,X-RAY DIFFRACTION,0.258,0.219,False,True,unknown,IGKV3,Kappa,,,,,,4s1q_H_L_G,False
8rz2,B,C,0,A,protein,,reticulocyte binding protein 5,IMMUNE SYSTEM,07/17/24,PfRH5 bound to monoclonal antibody R5.034,Homo sapiens; Plasmodium falciparum,homo sapiens,homo sapiens,plasmodium falciparum,"Farrell, B., Higgins, M.K.",2.4,X-RAY DIFFRACTION,0.305,0.255,False,True,IGHV3,IGLV1,Lambda,,,,,,8rz2_B_C_A,False
3hr5,I,P,0,T,peptide,,m1prime-derived peptide,IMMUNE SYSTEM,06/08/09,M1prime peptide from IgE bound by humanized antibody 47H4 Fab,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,,"Eigenbrot, C.W., Ultsch, M.H.",2.4,X-RAY DIFFRACTION,0.253,0.213,False,True,IGHV3,IGKV1,Kappa,,,,,,3hr5_I_P_T,False
7qnw,A,B,0,E,protein,,surface glycoprotein,VIRAL PROTEIN,12/23/21,The receptor binding domain of SARS-CoV-2 Omicron variant spike glycoprotein in complex with Beta-55 and EY6A Fabs,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, D., Ren, J., Stuart, D.I.",2.4,X-RAY DIFFRACTION,0.247,0.206,False,True,IGHV4,IGKV1,Kappa,,,,,,7qnw_A_B_E,False
9dx6,B,C,0,A,protein,,apical merozoite protein 1,CELL INVASION,11/13/24,Crystal structure of Plasmodium vivax (Palo Alto) PvAMA1 in complex with human Fab 826827,Homo sapiens; Plasmodium vivax,homo sapiens,homo sapiens,plasmodium vivax,"Dietrich, M.H., Tham, W.H., Jung, N.C.",2.4,X-RAY DIFFRACTION,0.235,0.192,False,True,IGHV4,IGKV3,Kappa,,,,,,9dx6_B_C_A,False
6ivz,H,L,0,A,protein,,envelope protein,VIRAL PROTEIN/IMMUNE SYSTEM,12/04/18,Crystal structure of 5A ScFv complexed with YFV-China sE in postfusion state,YELLOW FEVER VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,yellow fever virus,"Lu, X.S., Xiao, H.X., Li, S.H., Pang, X.F.",2.4,X-RAY DIFFRACTION,0.256,0.210,False,True,IGHV4,IGKV1,Kappa,,,,,,6ivz_H_L_A,False
5wb9,H,L,0,G,protein,,clade a/e 93th057 hiv-1 gp120 core,VIRAL PROTEIN,06/28/17,Crystal structure of CD4 binding site antibody N60P23 in complex with HIV-1 clade A/E strain 93TH057 gp120 core,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Gohain, N., Tolbert, W., Pazgier, M.",2.4,X-RAY DIFFRACTION,0.258,0.213,False,True,unknown,IGKV1,Kappa,,,,,,5wb9_H_L_G,False
1cz8,Y,X,0,V,protein,,vascular endothelial growth factor,IMMUNE SYSTEM,09/01/99,VASCULAR ENDOTHELIAL GROWTH FACTOR IN COMPLEX WITH AN AFFINITY MATURED ANTIBODY,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Chen, Y., Wiesmann, C., Fuh, G., Li, B., Christinger, H.W., McKay, P., de Vos, A.M., Lowman, H.B.",2.4,X-RAY DIFFRACTION,0.267,0.208,False,True,IGHV7,IGKV1,Kappa,1.1e-10,-14.12,SPR,37.0,10543973,1cz8_Y_X_V,True
8yxi,C,B,0,A,protein,,envelopment polyprotein,VIRAL PROTEIN/IMMUNE SYSTEM,09/11/24,Crystal structure of SFTSV Gn in complex with a neutralizing antibody 40C10,Mus musculus; Severe fever with thrombocytopenia syndrome virus,mus musculus,mus musculus,severe fever with thrombocytopenia syndromevirus ,"Yang, P., Guo, Y., Zhang, N.",2.4,X-RAY DIFFRACTION,0.249,0.206,False,False,IGHV1,IGKV6,Kappa,,,,,,8yxi_C_B_A,False
7fcp,B,D,0,A,protein,,spike protein s1,ANTIVIRAL PROTEIN,07/15/21,Crystallographic structure of two neutralizing antibodies in complex with SARS-CoV-2 spike receptor-binding Domain (RBD),SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zheng, P., Jin, T.",2.4,X-RAY DIFFRACTION,0.245,0.191,False,True,IGHV3,IGKV1,Kappa,,,,,,7fcp_B_D_A,False
7s7i,H,L,0,A,protein,,mhc class i chain-related protein a,IMMUNE SYSTEM,10/05/22,Crystal structure of Fab in complex with MICA alpha3 domain,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Lee, P.S., Strop, P.",2.4,X-RAY DIFFRACTION,0.260,0.220,False,True,IGHV3,IGKV3,Kappa,,,,,,7s7i_H_L_A,False
6xzw,H,L,0,D,protein,,lipoprot_c domain-containing protein,IMMUNE SYSTEM,02/05/20,Crystal structure of the meningococcal vaccine antigen fHbp in complex with a cross-reactive human Fab.,NEISSERIA MENINGITIDIS SEROGROUP B (STRAIN MC58); HOMO SAPIENS,homo sapiens,homo sapiens,neisseria meningitidis serogroup b (strainmc58) ,"Veggi, D., Cozzi, R.",2.4,X-RAY DIFFRACTION,0.250,0.200,False,True,IGHV3,IGKV3,Kappa,,,,,,6xzw_H_L_D,False
7dm2,H,L,0,A,protein,,phosphate-binding protein psts 1,TRANSPORT PROTEIN/IMMUNE SYSTEM,12/01/20,crystal structure of the M. tuberculosis phosphate ABC transport receptor PstS-1 in complex with Fab p4-170,MYCOBACTERIUM TUBERCULOSIS H37RV; HOMO SAPIENS,homo sapiens,homo sapiens,mycobacterium tuberculosis h37rv,"Ma, B., Freund, N., Xiang, Y.",2.4,X-RAY DIFFRACTION,0.216,0.170,False,True,IGHV3,IGLV1,Lambda,,,,,,7dm2_H_L_A,False
1jhl,H,L,0,A,protein,,pheasant egg white lysozyme,COMPLEX(ANTIBODY-ANTIGEN),05/04/93,THREE-DIMENSIONAL STRUCTURE OF A HETEROCLITIC ANTIGEN-ANTIBODY CROSS-REACTION COMPLEX,MUS MUSCULUS; PHASIANUS COLCHICUS,mus musculus,mus musculus,phasianus colchicus,"Chitarra, V., Alzari, P.M., Bentley, G.A., Bhat, T.N., Eisele, J.-L., Poljak, R.J.",2.4,X-RAY DIFFRACTION,unknown,0.214,False,True,IGHV1,IGKV16,Kappa,,,,,,1jhl_H_L_A,False
7m3n,H,L,0,A,protein,,capsid protein 2,VIRUS/Immune System,03/18/21,Canine parvovirus and Fab14 asymmetric reconstruction,MUS MUSCULUS; CANINE PARVOVIRUS TYPE 2,mus musculus,mus musculus,canine parvovirus type 2,"Goteschius, D.J., Hartmann, S.R., Hafenstein, S.L.",2.4,ELECTRON MICROSCOPY,,,False,False,IGHV1,IGKV6,Kappa,,,,,,7m3n_H_L_A,False
5cbe,C,D,0,F,protein,,c-x-c motif chemokine 13,IMMUNE SYSTEM,06/30/15,E10 in complex with CXCL13,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Tu, C., Bard, J., Mosyak, L.",2.4,X-RAY DIFFRACTION,0.275,0.248,True,True,IGHV1,IGLV2,Lambda,,,,,,5cbe_C_D_F,False
9vca,H,L,0,E,protein,,c-reactive protein,IMMUNE SYSTEM,11/19/25,Binding site between C-reactive protein and c2cc monoclonal antibody,Homo sapiens; Mus musculus albula,mus musculus albula,mus musculus albula,homo sapiens,"Moiseenko, A.V., Kalikin, A.V.",2.4,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,9vca_H_L_E,False
3ghe,H,L,0,P,peptide,,envelope glycoprotein,IMMUNE SYSTEM,03/03/09,Crystal structure of anti-HIV-1 Fab 537-10D in complex with V3 peptide MN,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,,"Kong, X.P., Burke, V.J.",2.4,X-RAY DIFFRACTION,0.241,0.187,False,False,IGHV3,IGLV2,Lambda,1.3e-06,-8.03,Other,25.0,19913488,3ghe_H_L_P,False
9jqv,H,L,0,A,protein,,envelopment polyprotein,VIRAL PROTEIN/IMMUNE SYSTEM,06/18/25,The crystal structure of SFTSV Gn and SD12 antibody complex,Homo sapiens; SFTS virus HB29,homo sapiens,homo sapiens,sfts virus hb29,"Shi, W.F., Quan, C.S., Qi, J.X.",2.4,X-RAY DIFFRACTION,0.255,0.225,False,True,IGHV3,IGKV1,Kappa,,,,,,9jqv_H_L_A,False
5jq6,H,L,0,A,protein,,clumping factor a,IMMUNE SYSTEM,05/04/16,Crystal structure of ClfA in complex with the Fab fragment of Tefibazumab,"MUS MUSCULUS, HOMO SAPIENS; STAPHYLOCOCCUS AUREUS","mus musculus, homo sapiens","mus musculus, homo sapiens",staphylococcus aureus,"Ganesh, V.K.",2.4,X-RAY DIFFRACTION,0.259,0.208,False,True,IGHV2,IGKV8,Kappa,7.900000000000001e-10,-12.41785844031504,SPR,,TBD,5jq6_H_L_A,False
6ss2,H,L,0,A,protein,,unknown,PROTEIN BINDING,09/06/19,Structure of arginase-2 in complex with the inhibitory human antigen-binding fragment Fab C0021158,HOMO SAPIENS,,,,"Burschowsky, D., Addyman, A., Fiedler, S., Groves, M., Haynes, S., Seewooruthun, C., Carr, M.",2.4,X-RAY DIFFRACTION,0.284,0.254,False,False,IGHV3,IGLV1,Lambda,,,,,,6ss2_H_L_A,False
2h1p,H,L,0,P,peptide,,pa1,COMPLEX (ANTIBODY/PEPTIDE),11/12/97,THE THREE-DIMENSIONAL STRUCTURES OF A POLYSACCHARIDE BINDING ANTIBODY TO CRYPTOCOCCUS NEOFORMANS AND ITS COMPLEX WITH A PEPTIDE FROM A PHAGE DISPLAY LIBRARY: IMPLICATIONS FOR THE IDENTIFICATION OF PEPTIDE MIMOTOPES,MUS MUSCULUS,mus musculus,mus musculus,,"Young, A.C.M., Valadon, P., Casadevall, A., Scharff, M.D., Sacchettini, J.C.",2.4,X-RAY DIFFRACTION,unknown,0.186,False,False,IGHV5,IGKV1,Kappa,,,,,,2h1p_H_L_P,False
5wt9,H,L,0,G,protein,,programmed cell death protein 1,IMMUNE SYSTEM,12/10/16,Complex structure of PD-1 and nivolumab-Fab,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Tan, S., Zhang, H., Chai, Y., Song, H., Tong, Z., Wang, Q., Qi, J., Wong, G., Zhu, X., Liu, W.J., Gao, S., Wang, Z., Shi, Y., Yang, F., Gao, G.F., Yan, J.",2.401,X-RAY DIFFRACTION,0.228,0.187,False,True,IGHV3,IGKV3,Kappa,1.45e-09,-12.058051461423284,SPR,,TBD,5wt9_H_L_G,False
6cdm,A,B,0,C,peptide,,hiv fusion peptide (512-519),IMMUNE SYSTEM,02/08/18,Structure of vaccine-elicited HIV-1 neutralizing antibody vFP7.04 in complex with HIV-1 fusion peptide residue 512-519,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,human immunodeficiency virus 1,"Xu, K., Liu, K., Kwong, P.D.",2.408,X-RAY DIFFRACTION,0.222,0.184,False,True,IGHV1,IGKV1,Kappa,8.05e-10,-12.40671421809852,Unknown,,TBD,6cdm_A_B_C,False
5do2,C,D,0,B,protein,,s protein,VIRAL PROTEIN/IMMUNE SYSTEM,09/10/15,Complex structure of MERS-RBD bound with 4C2 antibody,MIDDLE EAST RESPIRATORY SYNDROME CORONAVIRUS; MUS MUSCULUS,mus musculus,mus musculus,middle east respiratory syndrome coronavirus,"Li, Y., Wan, Y., Liu, P., Zhao, J., Lu, G., Qi, J., Wang, Q., Lu, X., Wu, Y., Liu, W., Yuen, K.Y., Perlman, S., Gao, G.F., Yan, J.",2.409,X-RAY DIFFRACTION,0.289,0.245,False,False,IGHV5,IGKV10,Kappa,1.6200000000000002e-07,-9.263879005639293,SPR,,TBD,5do2_C_D_B,False
6ieb,H,L,0,A,protein,,nsmgngc,STRUCTURAL PROTEIN/IMMUNE SYSTEM,04/10/19,Structure of RVFV Gn and human monoclonal antibody R15,HOMO SAPIENS; RIFT VALLEY FEVER VIRUS,homo sapiens,homo sapiens,rift valley fever virus,"Wang, Q.H., Wu, Y., Gao, F., Qi, J.X., Gao, G.F.",2.409,X-RAY DIFFRACTION,0.246,0.195,False,True,IGHV4,IGLV3,Lambda,,,,,,6ieb_H_L_A,False
6ieb,E,F,0,B,protein,,nsmgngc,STRUCTURAL PROTEIN/IMMUNE SYSTEM,04/10/19,Structure of RVFV Gn and human monoclonal antibody R15,HOMO SAPIENS; RIFT VALLEY FEVER VIRUS,homo sapiens,homo sapiens,rift valley fever virus,"Wang, Q.H., Wu, Y., Gao, F., Qi, J.X., Gao, G.F.",2.409,X-RAY DIFFRACTION,0.246,0.195,False,True,IGHV4,IGLV3,Lambda,,,,,,6ieb_E_F_B,False
8bk2,F,G,0,C,protein,,factor h-binding protein,PROTEIN BINDING,11/22/23,X-ray structure of meningococcal factor H binding protein variant 2 in complex with a specific and bactericidal human monoclonal antibody 1B1,Homo sapiens; Neisseria meningitidis serogroup B,homo sapiens,homo sapiens,neisseria meningitidis serogroup b,"Veggi, D., Bottomley, J.M.",2.41,X-RAY DIFFRACTION,0.270,0.204,False,True,IGHV3,IGKV3,Kappa,,,,,,8bk2_F_G_C,False
7e7y,C,D,0,E,protein,,spike protein s1,VIRAL PROTEIN,02/28/21,Crystal structure of the SARS-CoV-2 S RBD in complex with BD-623 Fab,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Wei, Y., Xiao, J.",2.41,X-RAY DIFFRACTION,0.241,0.197,False,True,IGHV3,IGLV2,Lambda,,,,,,7e7y_C_D_E,False
7o52,H,L,0,U,protein,,cd22 d6-d7 ig domains,IMMUNE SYSTEM,04/07/21,CD22 d6-d7 in complex with Fab m971,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Ereno-Orbea, J., Sicard, T., Julien, J.P.",2.41,X-RAY DIFFRACTION,0.264,0.226,False,True,IGHV6,IGKV1,Kappa,,,,,,7o52_H_L_U,False
5lbs,I,M,0,B,protein,,envelope protein e,IMMUNE SYSTEM-VIRAL PROTEIN,06/17/16,structural basis of Zika and Dengue virus potent antibody cross-neutralization,ZIKA VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,zika virus,"VANEY, M.C., ROUVINSKI, A., BARBA-SPAETH, G., REY, F.A.",2.41,X-RAY DIFFRACTION,0.217,0.194,False,True,IGHV3,IGKV3,Kappa,,,,,,5lbs_I_M_B,False
6nmr,F,G,0,I,protein,,tyrosine-protein phosphatase non-receptor type substrate 1,IMMUNE SYSTEM,01/11/19,Blocking Fab 119 anti-SIRP-alpha antibody in complex with SIRP-alpha Variant 1,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Wibowo, A.S., Carter, J.J., Sim, J.",2.42,X-RAY DIFFRACTION,0.323,0.289,False,True,IGHV3,IGKV3,Kappa,,,,,,6nmr_F_G_I,False
4o9h,H,L,0,A,protein,,interleukin-6,IMMUNE SYSTEM,01/02/14,Structure of Interleukin-6 in complex with a Camelid Fab fragment,HOMO SAPIENS; LLAMA GLAMA,lama glama,lama glama,homo sapiens,"Klarenbeek, A., Blanchetot, C., Schragel, G., Sadi, A.S., Ongenae, N., Hemrika, W., Wijdenes, J., Spinelli, S., Desmyter, A., Cambillau, C., Hultberg, A., Kretz-rommel, A., Dreier, T., De haard, H.J.W., Roovers, R.C.",2.42,X-RAY DIFFRACTION,0.244,0.216,False,True,IGHV3,IGLV8,Lambda,,,,,,4o9h_H_L_A,False
7kqb,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,11/14/20,SARS-CoV-2 spike glycoprotein:Fab 5A6 complex I,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Asarnow, D., Charles, C., Cheng, Y.",2.42,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7kqb_H_L_A,False
7mmo,A,B,0,C,protein,,spike protein s1,IMMUNE SYSTEM/VIRAL PROTEIN,04/30/21,LY-CoV1404 neutralizing antibody against SARS-CoV-2,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Hendle, J., Pustilnik, A., Sauder, J.M., Coleman, K.A., Boyles, J.S., Dickinson, C.D.",2.427,X-RAY DIFFRACTION,0.253,0.226,False,True,IGHV2,IGLV2,Lambda,,,,,,7mmo_A_B_C,False
9f91,E,F,0,I,protein,,designed single epitope respiratory syncytial virusimmunogen in complex with rsv90 fab ,DE NOVO PROTEIN,05/21/25,Crystal structure of a designed Respiratory Syncytial Virus immunogen in complex with RSV90 fab,Homo sapiens; synthetic construct,homo sapiens,homo sapiens,synthetic construct,"Castro, K.M., Correia, B.E.",2.43,X-RAY DIFFRACTION,0.287,0.251,False,True,IGHV3,IGKV3,Kappa,,,,,,9f91_E_F_I,False
4dqo,H,L,0,C,protein,,1fd6-v1v2 scaffold zm109 hiv-1 strain,IMMUNE SYSTEM,02/16/12,Crystal Structure of PG16 Fab in Complex with V1V2 Region from HIV-1 strain ZM109,HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Pancera, M., McLellan, J.S., Kwong, P.D.",2.438,X-RAY DIFFRACTION,0.230,0.201,False,True,IGHV3,IGLV2,Lambda,,,,,,4dqo_H_L_C,False
8h7l,E,H,0,C,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,08/30/23,Cryo-EM Structure of SARS-CoV-2 BA.2 Spike protein in complex with BA7535,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Liu, Z., Yan, A., Gao, Y.",2.44,ELECTRON MICROSCOPY,,,False,True,IGHV3,unknown,unknown,,,,,,8h7l_E_H_C,False
8g8a,A,B,0,C,peptide,,env polyprotein,IMMUNE SYSTEM,05/22/24,Crystal structure of DH1317.8 Fab in complex with HIV proximal MPER peptide,Homo sapiens; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Janus, B.M., Astavans, A., Ofek, G.",2.44,X-RAY DIFFRACTION,0.256,0.222,False,True,IGHV7,IGKV1,Kappa,,,,,,8g8a_A_B_C,False
5eii,A,B,0,I,protein,,histone chaperone asf1,IMMUNE SYSTEM,10/29/15,Structural determination of an protein complex of a Fab with increased solubility,HOMO SAPIENS; SACCHAROMYCES CEREVISIAE,homo sapiens,homo sapiens,saccharomyces cerevisiae,"Bailey, L.J., Kossiakoff, A.A., Chaperone-Enabled Studies of Epigenetic Regulation Enzymes (CEBS)",2.44,X-RAY DIFFRACTION,0.233,0.185,False,True,IGHV3,IGKV1,Kappa,,,,,,5eii_A_B_I,False
8y0q,H,L,0,2,protein,,vp2 of capsid protein,VIRUS/IMMUNE SYSTEM,10/09/24,Complex of FMDV O/18074 and inter-serotype broadly neutralizing antibodies pOA-2,Foot-and-mouth disease virus O; Sus scrofa,sus scrofa,sus scrofa,foot-and-mouth disease virus o,"Wu, S., Lei, D.",2.44,ELECTRON MICROSCOPY,,,False,True,unknown,unknown,unknown,,,,,,8y0q_H_L_2,False
5tih,H,L,0,A,protein,,cysteine-rich protective antigen,IMMUNE SYSTEM,10/03/16,Structural basis for inhibition of erythrocyte invasion by antibodies to Plasmodium falciparum protein CyRPA,PLASMODIUM FALCIPARUM; MUS MUSCULUS,mus musculus,mus musculus,plasmodium falciparum,"Chen, L., Xu, Y., Wang, W., Thompson, J.K., Goddard-Borger, E., Lawrence, M.C., Cowman, A.F.",2.44,X-RAY DIFFRACTION,0.212,0.189,False,True,IGHV1,IGKV9,Kappa,,,,,,5tih_H_L_A,False
9l9y,A,B,0,D,protein,,capsid protein,VIRAL PROTEIN/IMMUNE SYSTEM,01/14/26,Immune complex of HEV E2s and mAb 6H8,Hepatitis E virus; Mus musculus,mus musculus,mus musculus,hepatitis e virus,"Zimin, T., Guiping, W., Hai, Y., Qing, Z., Zizheng, Z., Ningshao, X., Shaowei, L.",2.44,X-RAY DIFFRACTION,0.236,0.216,False,False,IGHV1,IGKV4,Kappa,,,,,,9l9y_A_B_D,False
3u7y,H,L,0,G,protein,,envelope glycoprotein gp160,VIRAL PROTEIN/IMMUNE SYSTEM,10/14/11,Structure of NIH45-46 Fab in complex with gp120 of 93TH057 HIV,HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Diskin, R., Bjorkman, P.J.",2.4478,X-RAY DIFFRACTION,0.256,0.207,False,True,IGHV1,IGKV3,Kappa,,,,,,3u7y_H_L_G,False
8cwj,J,K,0,G,protein,,spike glycoprotein,IMMUNE SYSTEM,05/24/23,Fab arms of antibodies 4C12-B12 and CR3022 bound to pangolin receptor binding domain (pRBD),Homo sapiens; Pangolin coronavirus,homo sapiens,homo sapiens,pangolin coronavirus,"Langley, D.B., Christ, D.",2.449,X-RAY DIFFRACTION,0.230,0.196,False,True,IGHV3,IGKV1,Kappa,,,,,,8cwj_J_K_G,False
4xak,D,E,0,B,protein,,spike glycoprotein,IMMUNE SYSTEM,12/15/14,Crystal structure of potent neutralizing antibody m336 in complex with MERS Co-V RBD,HUMAN CORONAVIRUS EMC; HOMO SAPIENS,homo sapiens,homo sapiens,human coronavirus emc,"Zhou, T., Dimtrov, D.S., Ying, T.",2.45,X-RAY DIFFRACTION,0.249,0.198,False,True,IGHV1,IGKV1,Kappa,,,,,,4xak_D_E_B,False
6oor,H,L,0,A,protein,,antigen-presenting glycoprotein cd1d1,IMMUNE SYSTEM,04/23/19,Structure of 1B1 bound to mouse CD1d,MUS MUSCULUS; RATTUS NORVEGICUS,rattus norvegicus,rattus norvegicus,mus musculus,"Ying, G., Zajonc, D.M.",2.45,X-RAY DIFFRACTION,0.244,0.208,False,True,IGHV5,IGKV9,Kappa,,,,,,6oor_H_L_A,False
6zjg,H,L,0,C,peptide,,unknown,IMMUNE SYSTEM,06/29/20,Crystal structure of ACPA E4 in complex with CII-C-48-CIT,HOMO SAPIENS,,,,"Ge, C., Holmdahl, R.",2.45,X-RAY DIFFRACTION,0.265,0.223,False,False,IGHV4,IGLV1,Lambda,,,,,,6zjg_H_L_C,False
8jel,C,D,0,J,protein,,t-cell immunoreceptor with ig and itim domains,IMMUNE SYSTEM,02/28/24,"Crystal structure of TIGIT in complexed with Ociperlimab, crystal form I",Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Sun, J., Zhang, X.X., Song, J.",2.45,X-RAY DIFFRACTION,0.249,0.192,False,True,IGHV3,IGKV3,Kappa,,,,,,8jel_C_D_J,False
5bv7,H,L,0,A,protein,,phosphatidylcholine-sterol acyltransferase,HYDROLASE/IMMUNE SYSTEM,06/04/15,"Crystal structure of human LCAT (L4F, N5D) in complex with Fab of an agonistic antibody",HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Piper, D.E., Romanow, W.G., Thibault, S.T., Walker, N.P.C.",2.45,X-RAY DIFFRACTION,0.242,0.189,False,False,IGHV4,IGLV3,Lambda,,,,,,5bv7_H_L_A,False
5bv7,C,B,0,A,protein,,phosphatidylcholine-sterol acyltransferase,HYDROLASE/IMMUNE SYSTEM,06/04/15,"Crystal structure of human LCAT (L4F, N5D) in complex with Fab of an agonistic antibody",HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Piper, D.E., Romanow, W.G., Thibault, S.T., Walker, N.P.C.",2.45,X-RAY DIFFRACTION,0.242,0.189,False,True,IGHV3,IGLV3,Lambda,,,,,,5bv7_C_B_A,False
4k2u,I,M,0,B,protein,,erythrocyte binding antigen 175,IMMUNE SYSTEM,04/09/13,Crystal structure of PfEBA-175 F1 in complex with R218 antibody Fab fragment,PLASMODIUM FALCIPARUM; MUS MUSCULUS,mus musculus,mus musculus,plasmodium falciparum,"Tolia, N.H.",2.45,X-RAY DIFFRACTION,0.253,0.204,False,False,IGHV14,IGKV10,Kappa,1.53e-11,-14.754720790655163,SPR,,TBD,4k2u_I_M_B,False
8xk6,H,L,0,A,protein,,envelopment polyprotein,VIRAL PROTEIN,07/10/24,S2A5 Fab bound to SFTSV glycoprotein Gn,Mus musculus; Severe fever with thrombocytopenia syndrome virus,mus musculus,mus musculus,severe fever with thrombocytopenia syndromevirus ,"Deng, Z.",2.45,X-RAY DIFFRACTION,0.250,0.231,False,True,IGHV1,IGKV3,Kappa,,,,,,8xk6_H_L_A,False
6q20,H,L,0,A,protein,,neuraminidase,"VIRAL PROTEIN,HYDROLASE/IMMUNE SYSTEM",08/06/19,Crystal structure of human 1E01 Fab in complex with influenza virus neuraminidase from A/Japan/305/1957 (H2N2),INFLUENZA A VIRUS (STRAIN A/JAPAN/305/1957 H2N2); HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus (strain a/japan/305/1957h2n2) ,"Zhu, X., Wilson, I.A.",2.45,X-RAY DIFFRACTION,0.272,0.217,False,True,IGHV3,IGKV1,Kappa,,,,,,6q20_H_L_A,False
6oy4,D,C,0,A,protein,,der p 2 variant 3,allergen/immune system,05/14/19,Crystal structure of complex between recombinant Der p 2.0103 and Fab fragment of 7A1,DERMATOPHAGOIDES PTERONYSSINUS; MUS MUSCULUS,mus musculus,mus musculus,dermatophagoides pteronyssinus,"Kapingidza, A.B., Offermann, L.R., Glesner, J., Wunschmann, S., Vailes, L.D., Chapman, M.D.C., Pomes, A., Chruszcz, M.",2.45,X-RAY DIFFRACTION,0.260,0.203,False,True,IGHV9,IGKV3,Kappa,,,,,,6oy4_D_C_A,False
6wm9,B,C,0,A,protein,,reticulocyte binding protein 2b,CELL INVASION,04/20/20,Plasmodium vivax reticulocyte binding protein 2b (PvRBP2b) bound to human monoclonal antibody 237235,PLASMODIUM VIVAX (STRAIN SALVADOR I); HOMO SAPIENS,homo sapiens,homo sapiens,plasmodium vivax (strain salvador i),"Chan, L.J., Dietrich, M.H., Tham, W.H.",2.45,X-RAY DIFFRACTION,0.279,0.223,False,True,IGHV3,IGLV2,Lambda,,,,,,6wm9_B_C_A,False
6mlk,H,L,0,A,protein,,"6-deoxyerythronolide-b synthase erya3, modules 5 and 6",TRANSFERASE,09/27/18,Structure of Thioesterase from DEBS with a thioesterase-specific antibody,SACCHAROPOLYSPORA ERYTHRAEA; HOMO SAPIENS,homo sapiens,homo sapiens,saccharopolyspora erythraea,"Mathews, I.I., Li, X., Khosla, C.",2.45,X-RAY DIFFRACTION,0.235,0.175,False,True,IGHV4,IGKV2,Kappa,1.3e-08,-10.75850617036984,SPR,,TBD,6mlk_H_L_A,False
7s5r,B,C,0,A,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,03/09/22,Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibodies CV07-287 and COVA1-16,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Yuan, M., Wilson, I.A.",2.45,X-RAY DIFFRACTION,0.238,0.207,False,True,IGHV1,IGKV3,Kappa,,,,,,7s5r_B_C_A,False
8fa9,H,L,0,P,peptide,,circumsporozoite protein npdp peptide,IMMUNE SYSTEM,11/01/23,Crystal structure of Ky15.5 Fab in complex with circumsporozoite protein NPDP peptide,Mus musculus; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,plasmodium falciparum,"Thai, E., Prieto, K., Julien, J.P.",2.45,X-RAY DIFFRACTION,0.212,0.187,False,True,IGHV3,IGKV1,Kappa,,,,,,8fa9_H_L_P,False
4l5f,H,L,0,E,protein,,envelope protein,"VIRAL PROTEIN, IMMUNE SYSTEM",06/11/13,Crystal Structure of DENV1-E106 Fab bound to DENV-1 Envelope protein DIII,DENGUE VIRUS 1; MUS MUSCULUS,mus musculus,mus musculus,dengue virus 1,"Edeling, M.A., Nelson, C.A., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID)",2.45,X-RAY DIFFRACTION,0.239,0.190,False,False,IGHV1,IGKV17,Kappa,,,,,,4l5f_H_L_E,False
8fym,I,G,0,J,peptide,,ala-ser-leu-trp-asn-trp-phe-asn-ile-thr-asn-trp-leu-trp-tyr-ile-lys-lys-lys ,IMMUNE SYSTEM,10/11/23,Crystal structure of Fab235 in complex with MPER peptide,Mus musculus; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Tan, K., Kim, M., Reinherz, E.L.",2.45,X-RAY DIFFRACTION,0.244,0.200,False,True,IGHV1,IGKV8,Kappa,,,,,,8fym_I_G_J,False
6mqr,H,L,0,A,peptide,,hiv fusion peptide residue 512-519,IMMUNE SYSTEM,10/10/18,Vaccine-elicited NHP FP-targeting neutralizing antibody 0PV-a.01 in complex with FP (residue 512-519),PLATYRRHINI; SYNTHETIC CONSTRUCT,platyrrhini,platyrrhini,human immunodeficiency virus 1,"Xu, K., Wang, Y., Kwong, P.D.",2.45,X-RAY DIFFRACTION,0.209,0.175,False,True,IGHV4,IGKV1,Kappa,,,,,,6mqr_H_L_A,False
8fym,E,D,0,F,peptide,,ala-ser-leu-trp-asn-trp-phe-asn-ile-thr-asn-trp-leu-trp-tyr-ile-lys-lys-lys ,IMMUNE SYSTEM,10/11/23,Crystal structure of Fab235 in complex with MPER peptide,Mus musculus; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Tan, K., Kim, M., Reinherz, E.L.",2.45,X-RAY DIFFRACTION,0.244,0.200,False,True,IGHV1,IGKV8,Kappa,,,,,,8fym_E_D_F,False
6cdp,A,B,0,C,peptide,,hiv-1 fusion peptide 512-519,IMMUNE SYSTEM,02/08/18,Vaccine-elicited HIV-1 neutralizing antibody vFP20.01 in complex with HIV-1 fusion peptide residue 512-519,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,human immunodeficiency virus 1,"Xu, K., Liu, K., Kwong, P.D.",2.456,X-RAY DIFFRACTION,0.264,0.212,False,True,IGHV1,IGKV1,Kappa,1.64e-09,-11.985097354847062,Unknown,,TBD,6cdp_A_B_C,False
6mqe,H,L,0,C,peptide,,hiv fusion peptide,IMMUNE SYSTEM,10/09/18,Vaccine-elicited NHP FP-targeting neutralizing antibody DFPH-a.15 in complex with FP (residue 512-519),PLATYRRHINI; SYNTHETIC CONSTRUCT,platyrrhini,platyrrhini,human immunodeficiency virus 1,"Xu, K., Wang, Y., Kwong, P.D.",2.459,X-RAY DIFFRACTION,0.245,0.192,False,True,IGHV4,IGKV1,Kappa,,,,,,6mqe_H_L_C,False
8dzw,J,N,0,B,protein,,rsv fusion protein,STRUCTURAL PROTEIN,01/08/09,RSV F trimer bound to RSV-199 Fab,Homo sapiens; Human respiratory syncytial virus A2,homo sapiens,homo sapiens,human respiratory syncytial virus a2,"Wen, X., Jardetzky, T.S.",2.46,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV1,Lambda,,,,,,8dzw_J_N_B,False
6o41,B,A,0,N,protein,,immunoglobulin g-binding protein g (domain iii),IMMUNE SYSTEM,02/27/19,Crystal structure of the unbound PGZL1 germline Fab fragment (PGZL1_gVmDmJ),HOMO SAPIENS; STREPTOCOCCUS SP. GROUP G,homo sapiens,homo sapiens,streptococcus sp. group g,"Irimia, A., Wilson, I.A.",2.465,X-RAY DIFFRACTION,0.219,0.169,False,True,IGHV1,IGKV3,Kappa,,,,,,6o41_B_A_N,False
6jbt,H,L,0,F,protein,,programmed cell death protein 1,IMMUNE SYSTEM,01/26/19,Complex structure of toripalimab-Fab and PD-1,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Guo, L., Tan, S., Chai, Y., Qi, J., Gao, G.F., Yan, J.",2.47,X-RAY DIFFRACTION,0.252,0.201,False,True,IGHV1,IGKV1,Kappa,,,,,,6jbt_H_L_F,False
9cyh,E,I,0,B,protein,,neuraminidase,VIRAL PROTEIN/IMMUNE SYSTEM,08/13/25,Cryo-EM structure of DA03E17 Fab in complex with influenza virus neuraminidase from B/Colorado/06/2017,Homo sapiens; Influenza B virus (B/Colorado/06/2017),homo sapiens,homo sapiens,influenza b virus (b/colorado/06/2017),"Jo, G., Ward, A.B.",2.47,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV1,Kappa,,,,,,9cyh_E_I_B,False
8yvl,J,H,0,B,protein,,"vasodilator-stimulated phosphoprotein,neuraminidase",VIRAL PROTEIN/IMMUNE SYSTEM,07/02/25,Neuraminidase of A/California/04/2009 HIN1 in complex with CAV-F34 Fab,Homo sapiens; Influenza A virus (A/California/04/2009(H1N1)),homo sapiens,homo sapiens,"homo sapiens, influenza a virus(a/california/04/2009(h1n1)) ","Wang, X., Ge, J., Li, X.",2.47,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV3,Kappa,,,,,,8yvl_J_H_B,False
4ki5,E,F,0,M,protein,,coagulation factor viii,IMMUNE SYSTEM,05/01/13,Cystal structure of human factor VIII C2 domain in a ternary complex with murine inhbitory antibodies 3E6 and G99,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Walter, J.D., Meeks, S.L., Healey, J.F., Lollar, P., Spiegel, P.C.",2.47,X-RAY DIFFRACTION,0.238,0.188,False,False,IGHV1,IGKV9,Kappa,,,,,,4ki5_E_F_M,False
7wrv,U,V,0,C,protein,,spike glycoprotein,VIRAL PROTEIN,01/27/22,The interface of JMB2002 Fab binds to SARS-CoV-2 Omicron Variant S,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; MUS MUSCULUS,mus musculus,mus musculus,severe acute respiratory syndrome coronavirus2 ,"Yin, W., Xu, Y., Xu, P., Cao, X., Wu, C., Gu, C., He, X., Wang, X., Huang, S., Yuan, Q., Wu, K., Hu, W., Huang, Z., Liu, J., Wang, Z., Jia, F., Xia, K., Liu, P., Wang, X., Song, B., Zheng, J., Jiang, H., Cheng, X., Jiang, Y., Deng, S.J., Xu, H.E.",2.47,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,7wrv_U_V_C,False
4ki5,C,D,0,M,protein,,coagulation factor viii,IMMUNE SYSTEM,05/01/13,Cystal structure of human factor VIII C2 domain in a ternary complex with murine inhbitory antibodies 3E6 and G99,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Walter, J.D., Meeks, S.L., Healey, J.F., Lollar, P., Spiegel, P.C.",2.47,X-RAY DIFFRACTION,0.238,0.188,False,False,IGHV9,IGKV4,Kappa,,,,,,4ki5_C_D_M,False
4edw,H,L,0,V,protein,,beta-nerve growth factor,IMMUNE SYSTEM,04/02/14,Nerve Growth Factor in Complex with Fab from humanized version of mouse mAb 911 (tanezumab),Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Eigenbrot, C., Ultsch, M.",2.48,X-RAY DIFFRACTION,0.249,0.200,False,True,IGHV4,IGKV1,Kappa,,,,,,4edw_H_L_V,False
9o4n,G,K,0,D,protein,,neuraminidase,VIRAL PROTEIN/IMMUNE SYSTEM,08/13/25,Cryo-EM structure of CR12042 Fab in complex with influenza virus neuraminidase from A/California/07/2009 (H1N1),Homo sapiens; Influenza A virus (A/California/07/2009(H1N1)),homo sapiens,homo sapiens,influenza a virus (a/california/07/2009(h1n1)),"Jo, G., Ward, A.B.",2.48,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV2,Kappa,,,,,,9o4n_G_K_D,False
9gu1,H,G,0,A,protein,,acetylcholine receptor subunit alpha,MEMBRANE PROTEIN,05/14/25,Human adult muscle nAChR in resting state in nanodisc with alpha-bungarotoxin,Aequorea victoria; Bungarus multicinctus; Homo sapiens; Rattus norvegicus,rattus norvegicus,rattus norvegicus,homo sapiens,"Li, A., Pike, A.C.W., Chi, G., Webster, R., Maxwell, S., Liu, W., Beeson, D., Sauer, D.B., Dong, Y.Y.",2.48,ELECTRON MICROSCOPY,,,False,True,IGHV2,IGKV22,Kappa,,,,,,9gu1_H_G_A,False
4i2x,B,A,0,E,protein,,signal-regulatory protein gamma,IMMUNE SYSTEM,11/23/12,Crystal structure of Signal Regulatory Protein gamma (SIRP-gamma) in complex with FabOX117,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Nettleship, J.E., Ren, J., Stuart, D.I., Owens, R.J., Oxford Protein Production Facility (OPPF)",2.48,X-RAY DIFFRACTION,0.260,0.196,False,False,IGHV1,IGKV6,Kappa,1.2e-06,-8.077441989548914,AUC,,TBD,4i2x_B_A_E,False
7y0v,H,L,0,R,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,09/28/22,The co-crystal structure of BA.1-RBD with Fab-5549,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Xiao, J.Y., Zhang, Y.",2.48,X-RAY DIFFRACTION,0.268,0.211,False,True,IGHV4,IGLV3,Lambda,,,,,,7y0v_H_L_R,False
3gi9,H,L,0,C,protein,,uncharacterized protein mj0609,TRANSPORT PROTEIN,03/05/09,Crystal Structure of ApcT Transporter Bound to 7F11 Monoclonal Fab Fragment,MUS MUSCULUS; METHANOCALDOCOCCUS JANNASCHII,mus musculus,mus musculus,methanocaldococcus jannaschii,"Shaffer, P.L., Goehring, A.S., Shankaranarayanan, A., Gouaux, E., New York Consortium on Membrane Protein Structure (NYCOMPS)",2.48,X-RAY DIFFRACTION,0.296,0.248,False,True,IGHV1,IGKV8,Kappa,,,,,,3gi9_H_L_C,False
5dd0,H,L,0,P,peptide,,oligo peptide,IMMUNE SYSTEM,08/24/15,Crystal structures in an anti-HIV antibody lineage from immunization of Rhesus macaques,HUMAN IMMUNODEFICIENCY VIRUS 1; MACACA MULATTA,macaca mulatta,macaca mulatta,human immunodeficiency virus 1,"Zhang, R., Verkoczy, L., Wiehe, K., Alam, S.M., Nicely, N.I., Santra, S., Bradley, T., Pemble, C., Gao, F., Montefiori, D.C., Bouton-Verville, H., Kelsoe, G., Parks, R., Foulger, A., Tomaras, G., Keple, T.B., Moody, M.A., Liao, H.-X., Haynes, B.F.",2.488,X-RAY DIFFRACTION,0.274,0.227,False,True,IGHV4,IGKV1,Kappa,8.37e-08,-9.65512996306636,Unknown,,TBD,5dd0_H_L_P,False
7f7e,C,L,0,E,protein,,spike protein s1,VIRAL PROTEIN,06/29/21,SARS-CoV-2 S protein RBD in complex with A5-10 Fab,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Dou, Y., Wang, X., Wang, K., Liu, P., Lu, B.",2.49,X-RAY DIFFRACTION,0.256,0.214,False,True,IGHV3,IGKV1,Kappa,,,,,,7f7e_C_L_E,False
7dr4,A,B,0,J,protein,,interleukin-2,IMMUNE SYSTEM,12/25/20,Complex of anti-human IL-2 antibody and human IL-2,MUS MUSCULUS; HOMO SAPIENS,mus musculus,mus musculus,homo sapiens,"Kim, M.S., Kim, J.E.",2.49,X-RAY DIFFRACTION,0.258,0.195,False,True,IGHV1,IGKV17,Kappa,,,,,,7dr4_A_B_J,False
7x29,F,G,0,C,protein,,spike glycoprotein,VIRAL PROTEIN,11/09/22,MERS-CoV spike complex with S41 neutralizing antibody Fab Class2 (1u2d RBD with 2Fab),Homo sapiens; Middle East respiratory syndrome-related coronavirus,homo sapiens,homo sapiens,middle east respiratory syndrome-relatedcoronavirus ,"Zeng, J.W., Zhang, S.Y., Zhou, H.X., Wang, X.W.",2.49,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,7x29_F_G_C,False
8wpw,C,D,0,R,protein,,spike protein s1,IMMUNE SYSTEM/VIRAL PROTEIN,10/16/24,"Cryo-EM structure of SARS-CoV-2 XBB.1.5 receptor-binding domain (RBD) complexed with CB6 mutant,S309, and S304 antibodies",Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Su, C., Qi, J.X., Gao, G.F.",2.49,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8wpw_C_D_R,False
6lz4,D,E,0,F,peptide,,map peptide,IMMUNE SYSTEM,05/20/20,Crystal structure of PMab-1 Fv-clasp fragment with its antigen peptide,RATTUS NORVEGICUS; SYNTHETIC CONSTRUCT,rattus norvegicus,rattus norvegicus,mus musculus,"Arimori, T., Takagi, J.",2.49,X-RAY DIFFRACTION,0.269,0.245,False,True,IGHV1,IGKV3,Kappa,,,,,,6lz4_D_E_F,False
7ul0,H,L,0,A,protein,,spike protein s1,VIRAL PROTEIN/Immune System,03/08/23,Crystal structure of SARS-CoV-2 RBD in complex with the ridge-binding nAb EH8 isolated from a nonvaccinated pediatric patient,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Chen, Y., Tolbert, W.D., Bai, X., Pazgier, M.",2.49,X-RAY DIFFRACTION,0.256,0.225,False,True,IGHV1,IGLV2,Lambda,,,,,,7ul0_H_L_A,False
7eyc,H,L,0,P,peptide,,acetylated tau peptide,IMMUNE SYSTEM,05/30/21,Crystal structure of Tau and acetylated tau peptide antigen,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,synthetic construct,"Hong, M., Park, J.",2.49,X-RAY DIFFRACTION,0.245,0.192,False,True,IGHV4,IGKV1,Kappa,,,,,,7eyc_H_L_P,False
7ox1,H,L,0,X,protein,,interleukin-9,CYTOKINE,12/28/22,Fab 7D6: hIL-9 complex,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"De Vos, T., Savvides, S.N.",2.49,X-RAY DIFFRACTION,0.262,0.209,False,True,IGHV4,IGLV8,Lambda,,,,,,7ox1_H_L_X,False
8a44,C,D,0,A,protein,,duffy binding protein,CELL ADHESION,06/07/23,Plasmodium vivax Duffy binding protein region II bound the DARC ectodomain and monoclonal antibody DB1,Homo sapiens; Plasmodium vivax,homo sapiens,homo sapiens,plasmodium vivax,"Moskovitz, R., Higgins, M.K.",2.49,X-RAY DIFFRACTION,0.225,0.196,False,True,IGHV5,IGKV1,Kappa,,,,,,8a44_C_D_A,False
8y6h,C,B,0,A,protein,,"atp-dependent translocase abcb1,mneongreen",MEMBRANE PROTEIN,04/17/24,P-glycoprotein in complex with UIC2 Fab and triple elacridar molecules in LMNG detergent,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Hamaguchi-Suzuki, N., Adachi, N., Moriya, T., Kawasaki, M., Suzuki, K., Anzai, N., Senda, T., Murata, T.",2.49,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,8y6h_C_B_A,False
7dr4,H,L,0,K,protein,,interleukin-2,IMMUNE SYSTEM,12/25/20,Complex of anti-human IL-2 antibody and human IL-2,MUS MUSCULUS; HOMO SAPIENS,mus musculus,mus musculus,homo sapiens,"Kim, M.S., Kim, J.E.",2.49,X-RAY DIFFRACTION,0.258,0.195,False,True,IGHV1,IGKV17,Kappa,,,,,,7dr4_H_L_K,False
7mzf,H,L,0,A,protein,,spike protein s1,VIRAL PROTEIN,05/24/21,SARS-CoV-2 receptor binding domain bound to Fab PDI 37,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Pymm, P., Chan, L.J., Dietrich, M.H., Tan, L.L., Tham, W.H.",2.493,X-RAY DIFFRACTION,0.227,0.185,False,True,IGHV3,IGKV1,Kappa,,,,,,7mzf_H_L_A,False
4nzt,H,L,0,M,protein,,protein m td,PROTEIN BINDING/IMMUNE SYSTEM,12/12/13,Crystal structure of the antibody-binding region of Protein M (Protein M TD) in complex with anti-infleunza hemagglutinin antibody CR9114 Fab,MYCOPLASMA GENITALIUM; HOMO SAPIENS,homo sapiens,homo sapiens,mycoplasma genitalium,"Zhu, X., Wilson, I.A.",2.497,X-RAY DIFFRACTION,0.246,0.177,False,True,IGHV1,IGLV1,Lambda,,,,,,4nzt_H_L_M,False
6p60,J,K,0,L,peptide,,hiv fusion peptide residue 512-519,IMMUNE SYSTEM,06/03/20,Vaccine-elicited NHP FP-targeting neutralizing antibody A12V163-a.02 in complex with HIV fusion peptide (residue 512-519),PLATYRRHINI; SYNTHETIC CONSTRUCT,platyrrhini,platyrrhini,human immunodeficiency virus 1,"Xu, K., Liu, K., Kwong, P.D.",2.498,X-RAY DIFFRACTION,0.209,0.197,False,True,IGHV4,IGLV1,Lambda,,,,,,6p60_J_K_L,False
4ht1,H,L,0,T,protein,,tumor necrosis factor ligand superfamily member 12,IMMUNE SYSTEM,10/31/12,Human TWEAK in complex with the Fab fragment of a neutralizing antibody,HOMO SAPIENS; ORYCTOLAGUS CUNICULUS,oryctolagus cuniculus,oryctolagus cuniculus,homo sapiens,"Lammens, A.",2.498,X-RAY DIFFRACTION,0.211,0.183,False,False,IGHV1,IGKV1,Kappa,,,,,,4ht1_H_L_T,False
3idx,H,L,0,G,protein,,hiv-1 hxbc2 gp120 core,IMMUNE SYSTEM,07/22/09,"Crystal structure of HIV-gp120 core in complex with CD4-binding site antibody b13, space group C222",HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Chen, L., Kwon, Y.D., Zhou, T., Wu, X., O'Dell, S., Cavacini, L., Hessell, A.J., Pancera, M., Tang, M., Xu, L., Yang, Z.Y., Zhang, M.Y., Arthos, J., Burton, D.R., Dimitrov, D.S., Nabel, G.J., Posner, M., Sodroski, J., Wyatt, R., Mascola, J.R., Kwong, P.D.",2.5,X-RAY DIFFRACTION,0.239,0.178,False,True,IGHV3,IGKV1,Kappa,4.04e-09,-11.450944611411623,SPR,,TBD,3idx_H_L_G,True
7d85,B,C,0,A,protein,,receptor tyrosine-protein kinase erbb-3,IMMUNE SYSTEM,10/07/20,Crystal structure of anti-ErbB3 Fab ISU104 in complex with human ErbB3 extracellular domain 3,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Yoo, Y., Cho, H.S.",2.5,X-RAY DIFFRACTION,0.258,0.203,False,True,IGHV3,IGLV1,Lambda,,,,,,7d85_B_C_A,False
9uvi,B,A,0,C,protein,,beta-2-microglobulin,IMMUNE SYSTEM,09/03/25,Crystal structure of beta 2 microglobulin in complex with antibody BBM.1,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Wei, P.C., Wu, J.J.",2.5,X-RAY DIFFRACTION,0.246,0.197,False,True,IGHV14,IGKV12,Kappa,,,,,,9uvi_B_A_C,False
6v4n,D,E,0,W,protein,,neuraminidase,VIRAL PROTEIN,11/28/19,Structure of human 1G05 Fab in complex with influenza virus neuraminidase from B/Phuket/3073/2013,INFLUENZA B VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,influenza b virus,"Dai, Y.N., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID)",2.5,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV1,Kappa,,,,,,6v4n_D_E_W,False
4xgz,M,N,0,m,peptide,,unknown,CELL ADHESION,01/04/15,Crystal structure of human paxillin LD2 motif in complex with Fab fragment,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,homo sapiens,"Nocula-Lugowska, M., Lugowski, M., Salgia, R., Kossiakoff, A.A.",2.5,X-RAY DIFFRACTION,0.245,0.228,False,True,IGHV3,IGKV1,Kappa,2.4000000000000003e-08,-10.395251776049642,Unknown,,TBD,4xgz_M_N_m,False
4n9g,H,L,0,Y,peptide,,epitope scaffold rsv_1isea_ffl_001_c,IMMUNE SYSTEM,10/21/13,Crystal Structure of a Computationally Designed RSV-Presenting Epitope Scaffold And Its Elicited Antibody 17HD9,MACACA MULATTA; SYNTHETIC CONSTRUCT,macaca mulatta,macaca mulatta,synthetic construct,"Carrico, C.T.D., Strong, R.K.",2.5,X-RAY DIFFRACTION,0.295,0.263,False,True,IGHV4,IGKV1,Kappa,3.26e-10,-12.942286816628542,Unknown,,TBD,4n9g_H_L_Y,False
5dmg,E,F,0,X,peptide,,microtubule-associated protein,IMMUNE SYSTEM,09/08/15,X-RAY STRUCTURE OF THE FAB FRAGMENT OF THE ANTI TAU ANTIBODY RB86 IN COMPLEX WITH THE PHOSPHORYLATED TAU PEPTIDE (416-430),ORYCTOLAGUS CUNICULUS; SYNTHETIC CONSTRUCT,oryctolagus cuniculus,oryctolagus cuniculus,homo sapiens,"Benz, J., Lorenz, S., Georges, G., Jochner, A., Goepfert, U., Grueninger, F., Bujotzek, A.",2.5,X-RAY DIFFRACTION,0.263,0.210,False,True,IGHV1,IGKV1,Kappa,,,,,,5dmg_E_F_X,False
7ly2,N,O,0,J,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,03/05/21,SARS-CoV-2 S/S2M11/S2M28 Global Refinement,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"McCallum, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)",2.5,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV3,Lambda,,,,,,7ly2_N_O_J,False
5hys,A,B,0,G,protein,,ig epsilon chain c region,IMMUNE SYSTEM,02/01/16,Structure of IgE complexed with omalizumab,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Pennington, L.F., Tarchevskaya, S.S., Sathiyamoorthy, K., Jardetzky, T.S.",2.5,X-RAY DIFFRACTION,0.239,0.221,False,True,IGHV3,IGKV1,Kappa,3.89e-11,-14.201849726854263,SPR,,TBD,5hys_A_B_G,False
6lxi,H,L,0,A,protein,,neuraminidase,HYDROLASE/IMMUNE SYSTEM,02/11/20,Crystal structure of Z2B3 Fab in complex with influenza virus neuraminidase from A/Brevig Mission/1/1918 (H1N1),INFLUENZA A VIRUS (STRAIN A/BREVIG MISSION/1/1918 H1N1); HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus (strain a/brevigmission/1/1918 h1n1) ,"Jiang, H., Peng, W., Qi, J., Chai, Y., Song, H., Shi, Y., Gao, G.F., Wu, Y.",2.5,X-RAY DIFFRACTION,0.212,0.183,False,True,IGHV1,IGLV2,Lambda,,,,,,6lxi_H_L_A,False
6udj,H,I,0,J,protein,,envelope glycoprotein gp120,VIRAL PROTEIN/IMMUNE SYSTEM,09/19/19,HIV-1 bNAb 1-18 in complex with BG505 SOSIP.664 and 10-1074,HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Abernathy, M.E., Barnes, C.O., Gristick, H.B., Bjorkman, P.J.",2.5,ELECTRON MICROSCOPY,,,False,True,unknown,IGKV3,Kappa,,,,,,6udj_H_I_J,False
8siq,H,L,0,A,protein,,spike protein s1,IMMUNE SYSTEM,03/13/24,Crystal structure of SARS-CoV-2 spike receptor-binding domain in complex with broadly neutralizing antibodies CC25.36 and CV38-142 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Liu, H., Wilson, I.A.",2.5,X-RAY DIFFRACTION,0.287,0.247,False,True,IGHV3,IGLV1,Lambda,,,,,,8siq_H_L_A,False
6wbv,H,L,0,A,protein,,solute carrier family 40 member 1,TRANSLOCASE/IMMUNE SYSTEM/HORMONE,03/27/20,Structure of human ferroportin bound to hepcidin and cobalt in lipid nanodisc,HOMO SAPIENS; MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Billesboelle, C.B., Azumaya, C.M., Gonen, S., Powers, A., Kretsch, R.C., Schneider, S., Arvedson, T., Dror, R.O., Cheng, Y., Manglik, A.",2.5,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV3,Kappa,,,,,,6wbv_H_L_A,False
4zso,D,C,0,F,protein,,natural cytotoxicity triggering receptor 3 ligand 1,IMMUNE SYSTEM,05/13/15,"Crystal structure of a complex between B7-H6, a tumor cell ligand for natural cytotoxicity receptor NKp30, and an inhibitory antibody",HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Xu, X., Li, Y., Mariuzza, R.A.",2.5,X-RAY DIFFRACTION,0.257,0.226,False,True,IGHV1,IGKV4,Kappa,,,,,,4zso_D_C_F,False
1ztx,H,L,0,E,protein,,envelope protein,Viral protein/Immune system,05/27/05,West Nile Virus Envelope Protein DIII in complex with neutralizing E16 antibody Fab,WEST NILE VIRUS; MUS MUSCULUS,mus musculus,mus musculus,west nile virus,"Nybakken, G.E., Oliphant, T., Diamond, M.S., Fremont, D.H.",2.5,X-RAY DIFFRACTION,0.282,0.208,False,False,IGHV1,IGKV6,Kappa,,,,,,1ztx_H_L_E,False
5x0t,A,B,0,E,protein,,basigin,IMMUNE SYSTEM,01/23/17,Crystal structure of CD147 C2 domain in complex with Fab of its monoclonal antibody 6H8,MUS MUSCULUS; HOMO SAPIENS,mus musculus,mus musculus,homo sapiens,"Lin, P., Zhang, M.-Y., Ye, S., Chen, X., Yu, X.-L., Zhang, R.-G., Zhu, P., Chen, Z.-N.",2.5,X-RAY DIFFRACTION,0.300,0.246,False,True,IGHV6,IGKV6,Kappa,,,,,,5x0t_A_B_E,False
6o3b,G,E,0,H,protein,,frizzled-7,SIGNALING PROTEIN,02/26/19,Crystal structure of Frizzled 7 CRD in complex with F6 Fab,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Raman, S., Beilschmidt, M., Fransson, J., Julien, J.P.",2.5,X-RAY DIFFRACTION,0.283,0.248,False,True,IGHV3,IGKV1,Kappa,,,,,,6o3b_G_E_H,False
4edx,H,L,0,V,protein,,beta-nerve growth factor,immune system,03/27/12,Nerve Growth Factor in Complex with Fab from mouse mAb 911,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Eigenbrot, C., Ultsch, M.",2.5,X-RAY DIFFRACTION,0.258,0.208,False,True,IGHV2,IGKV10,Kappa,,,,,,4edx_H_L_V,False
4dvr,H,L,0,G,protein,,envelope glycoprotein gp160,IMMUNE SYSTEM/TRANSCRIPTION INHIBITOR,02/23/12,Crystal structure of YU2 gp120 core in complex with Fab 48d and NBD-557,HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 (ISOLATE YU2),homo sapiens,homo sapiens,human immunodeficiency virus type 1 (isolateyu2) ,"Kwon, Y.D., Kwong, P.D.",2.5,X-RAY DIFFRACTION,0.289,0.228,False,True,IGHV1,IGKV1,Kappa,,,,,,4dvr_H_L_G,False
6udj,Q,B,0,G,protein,,envelope glycoprotein gp120,VIRAL PROTEIN/IMMUNE SYSTEM,09/19/19,HIV-1 bNAb 1-18 in complex with BG505 SOSIP.664 and 10-1074,HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Abernathy, M.E., Barnes, C.O., Gristick, H.B., Bjorkman, P.J.",2.5,ELECTRON MICROSCOPY,,,False,True,IGHV4,unknown,unknown,,,,,,6udj_Q_B_G,False
8vgn,A,B,0,I,protein,,b-lymphocyte antigen cd20,MEMBRANE PROTEIN/IMMUNE SYSTEM,11/06/24,CryoEM structure of CD20 in complex with wild type Rituximab Fab,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Kung, J.E., Jao, C.C., Arthur, C.P., Sudhamsu, J.",2.5,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV4,Kappa,,,,,,8vgn_A_B_I,False
7sl5,G,H,0,I,peptide,,pro-ser-lys-arg-ser-phe-ile-glu-asp-leu-leu-phe-asn,VIRAL PROTEIN/IMMUNE SYSTEM,07/20/22,Crystal Structure of VP12E7 Fab in complex with SARS-CoV-2 S fusion peptide,mammal environmental sample; SYNTHETIC CONSTRUCT,mammal environmental sample,mammal environmental sample,severe acute respiratory syndrome coronavirus2 ,"Tortorici, M.A., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)",2.5,X-RAY DIFFRACTION,0.238,0.195,False,True,IGHV3,IGKV1,Kappa,,,,,,7sl5_G_H_I,False
1ikf,H,L,0,C,peptide,,cyclosporin a,IMMUNE SYSTEM/IMMUNOSUPPRESSANT,12/09/93,A CONFORMATION OF CYCLOSPORIN A IN AQUEOUS ENVIRONMENT REVEALED BY THE X-RAY STRUCTURE OF A CYCLOSPORIN-FAB COMPLEX,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,tolypocladium inflatum,"Vix, O., Altschuh, D., Rees, B., Thierry, J.-C.",2.5,X-RAY DIFFRACTION,unknown,0.164,False,True,IGHV5,IGKV10,Kappa,,,,,,1ikf_H_L_C,False
4rav,C,D,0,F,peptide,,huntingtin,IMMUNE SYSTEM/Apoptosis,09/11/14,Crystal structure of scFvC4 in complex with the first 17 AA of huntingtin,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,homo sapiens,"De Genst, E., Chirgadze, D.Y., Dobson, C.M.",2.5,X-RAY DIFFRACTION,0.226,0.180,False,True,IGHV3,IGLV2,Lambda,,,,,,4rav_C_D_F,False
3qg6,H,L,0,C,peptide,,agr autoinducing peptide,IMMUNE SYSTEM/INHIBITOR,01/24/11,Structural Basis for Ligand Recognition and Discrimination of a Quorum Quenching Antibody,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,,"Kirchdoerfer, R.N., Janda, J.D., Kaufmann, G.F, Wilson, I.A",2.5,X-RAY DIFFRACTION,0.239,0.184,False,True,IGHV3,IGKV1,Kappa,,,,,,3qg6_H_L_C,False
9cqb,B,A,0,D,peptide,,mature secreted glycoprotein g,VIRAL PROTEIN/IMMUNE SYSTEM,02/19/25,Antibody 1G8 bound to the central conserved domain of RSV G,Homo sapiens; Respiratory syncytial virus A2,homo sapiens,homo sapiens,respiratory syncytial virus a2,"Juarez, M.J., DuBois, M.J.",2.5,X-RAY DIFFRACTION,0.263,0.226,False,True,IGHV4,IGKV3,Kappa,,,,,,9cqb_B_A_D,False
7e6p,H,L,0,A,peptide,,amyloid beta fragment with an intramolecular disulfide bondat positions 17 and 28 ,IMMUNE SYSTEM,02/23/21,Fab-amyloid beta fragment complex,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Kita, A., Irie, K., Irie, Y., Miki, K.",2.5,X-RAY DIFFRACTION,0.244,0.191,False,False,IGHV1,IGKV8,Kappa,,,,,,7e6p_H_L_A,False
1ncc,H,L,0,N,protein,,influenza a subtype n9 neuraminidase,HYDROLASE(O-GLYCOSYL),01/21/92,CRYSTAL STRUCTURES OF TWO MUTANT NEURAMINIDASE-ANTIBODY COMPLEXES WITH AMINO ACID SUBSTITUTIONS IN THE INTERFACE,INFLUENZA A VIRUS; MUS MUSCULUS,mus musculus,mus musculus,influenza a virus,"Tulip, W.R., Varghese, J.N., Colman, P.M.",2.5,X-RAY DIFFRACTION,unknown,0.212,False,False,IGHV9,IGKV6,Kappa,,,,,,1ncc_H_L_N,False
1kc5,H,L,0,P,peptide,,ps1 peptide,IMMUNE SYSTEM,11/07/01,CRYSTAL STRUCTURE OF ANTIBODY PC287 IN COMPLEX WITH PS1 PEPTIDE,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,,"Nair, D.T., Singh, K., Siddiqui, Z., Nayak, B.P., Rao, K.V., Salunke, D.M.",2.5,X-RAY DIFFRACTION,0.270,0.195,False,False,IGHV3,IGKV6,Kappa,,,,,,1kc5_H_L_P,False
7orb,A,B,0,R,protein,,spike protein s1,VIRAL PROTEIN,06/04/21,Crystal structure of the L452R mutant receptor binding domain of SARS-CoV-2 Spike glycoprotein in complex with COVOX-75 and COVOX-253 Fabs,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, D., Ren, J., Stuart, D.I.",2.5,X-RAY DIFFRACTION,0.251,0.213,False,True,IGHV3,IGKV1,Kappa,,,,,,7orb_A_B_R,False
4ffy,H,L,0,A,protein,,envelope glycoprotein,IMMUNE SYSTEM/VIRAL PROTEIN,06/20/12,"Crystal structure of DENV1-E111 single chain variable fragment bound to DENV-1 DIII, strain 16007.",Dengue virus 1; Mus musculus,mus musculus,mus musculus,dengue virus 1,"Austin, S.K., Nelson, C.A., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID)",2.5,X-RAY DIFFRACTION,0.229,0.174,True,True,IGHV1,IGKV3,Kappa,,,,,,4ffy_H_L_A,False
3skj,I,M,0,F,protein,,ephrin type-a receptor 2,IMMUNE SYSTEM,06/22/11,Structural And Functional Characterization of an Agonistic Anti-Human EphA2 Monoclonal Antibody,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Oganesyan, V.Y., Wu, H., Dall'Acqua, W.F.",2.5,X-RAY DIFFRACTION,0.271,0.216,False,True,IGHV3,IGKV1,Kappa,8.1e-10,-12.4,SPR,,21867711,3skj_I_M_F,False
1kcs,H,L,0,P,peptide,,ps1 peptide,IMMUNE SYSTEM,11/11/01,CRYSTAL STRUCTURE OF ANTIBODY PC282 IN COMPLEX WITH PS1 PEPTIDE,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,,"Nair, D.T., Singh, K., Siddiqui, Z., Nayak, B.P., Rao, K.V.S., Salunke, D.M.",2.5,X-RAY DIFFRACTION,0.277,0.209,False,False,IGHV3,IGKV6,Kappa,,,,,,1kcs_H_L_P,False
8dcm,A,B,0,C,protein,,adp-ribosylating binary toxin binding subunit cdtb,TOXIN/IMMUNE SYSTEM,01/08/09,Crystal structure of Clostridioides difficile binary toxin proCDTb lacking D4 in complex with BINTOXB/22 Fab,Clostridioides difficile; Mus musculus,mus musculus,mus musculus,clostridioides difficile,"Goldsmith, J.A., McLellan, J.S.",2.5,X-RAY DIFFRACTION,0.227,0.198,False,True,IGHV9,IGKV6,Kappa,,,,,,8dcm_A_B_C,False
4cad,E,D,0,F,protein,,"ras and a-factor converting enzyme 1, rce1",PROTEIN BINDING,10/08/13,Mechanism of farnesylated CAAX protein processing by the integral  membrane protease Rce1,METHANOCOCCUS MARIPALUDIS; MUS MUSCULUS,mus musculus,mus musculus,methanococcus maripaludis,"Kulkarni, K., Manolaridis, I., Dodd, R.B., Cronin, N., Ogasawara, S., Iwata, S., Barford, D.",2.5,X-RAY DIFFRACTION,0.2669,0.2262,False,False,IGHV1,IGKV12,Kappa,,,,,,4cad_E_D_F,False
5ijk,B,D,0,Y,peptide,,peptide pro-leu-gln-pro-glu-gln-pro-phe-pro,IMMUNE SYSTEM,03/02/16,Crystal structure of anti-gliadin 1002-1E03 Fab fragment in complex of peptide PLQPEQPFP,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,triticum aestivum,"Chen, X., Zhao, Y., Harlos, K., Snir, O., Sollid, L.M.",2.5,X-RAY DIFFRACTION,0.265,0.209,False,True,IGHV3,IGKV4,Kappa,,,,,,5ijk_B_D_Y,False
2jel,H,L,0,P,protein,,histidine-containing protein,COMPLEX (ANTIBODY/ANTIGEN),02/24/98,JEL42 FAB/HPR COMPLEX,MUS MUSCULUS; ESCHERICHIA COLI,mus musculus,mus musculus,escherichia coli,"Prasad, L., Waygood, E.B., Lee, J.S., Delbaere, L.T.J.",2.5,X-RAY DIFFRACTION,0.280,0.210,False,False,IGHV1,IGKV1,Kappa,3.7e-09,-11.49,Other,23.0,9671548,2jel_H_L_P,True
3u0t,B,A,0,F,peptide,,amyloid beta a4 protein,IMMUNE SYSTEM,09/29/11,Fab-antibody complex,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,homo sapiens,"LaPorte, S.L., Pons, J.P.",2.5,X-RAY DIFFRACTION,0.268,0.219,False,True,IGHV1,IGKV2D,Kappa,3e-10,-12.991531042419238,Unknown,,TBD,3u0t_B_A_F,False
8tbb,H,L,0,D,protein,,t-cell immunoglobulin mucin receptor 3,IMMUNE SYSTEM,08/28/24,"F9S, novel TIM-3 targeting antibody, bound to IgV domain of TIM-3",Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Oganesyan, V., van Dyk, N., Mazor, Y., Yang, C.",2.5,X-RAY DIFFRACTION,0.241,0.191,False,True,IGHV3,IGKV1,Kappa,,,,,,8tbb_H_L_D,False
1fdl,H,L,0,Y,protein,,hen egg white lysozyme,COMPLEX (ANTIBODY-ANTIGEN),08/27/90,CRYSTALLOGRAPHIC REFINEMENT OF THE THREE-DIMENSIONAL STRUCTURE OF THE FAB D1.3-LYSOZYME COMPLEX AT 2.5-ANGSTROMS RESOLUTION,MUS MUSCULUS; GALLUS GALLUS,mus musculus,mus musculus,gallus gallus,"Fischmann, T.O., Poljak, R.J.",2.5,X-RAY DIFFRACTION,unknown,0.184,False,True,IGHV2,IGKV12,Kappa,,,,,,1fdl_H_L_Y,False
8v52,D,C,0,B,protein,,transforming growth factor beta-3,CYTOKINE/IMMUNE SYSTEM,04/10/24,Crystal structure of 2A10 Fab bound to Human TGF-beta3,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Yin, J., Lupardus, P.J.",2.5,X-RAY DIFFRACTION,0.269,0.221,False,True,IGHV3,IGKV1,Kappa,,,,,,8v52_D_C_B,False
8x0t,H,L,0,A,protein,,frizzled-8,SIGNALING PROTEIN/IMMUNE SYSTEM,11/22/23,Frizzled8 CRD in complex with pF8_AC3 Fab,Homo sapiens; synthetic construct,synthetic construct,synthetic construct,homo sapiens,"Li, N., Ge, Q.",2.5,X-RAY DIFFRACTION,0.290,0.238,False,True,IGHV3,IGLV3,Lambda,,,,,,8x0t_H_L_A,False
8xse,H,L,0,A,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,07/17/24,SARS-CoV-2 RBD + IMCAS-123 + IMCAS-72 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Tong, Z., Cui, Y., Xie, Y., Tong, J., Gao, G.F., Qi, J.",2.5,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8xse_H_L_A,False
1mlc,D,C,0,F,protein,,hen egg white lysozyme,COMPLEX (ANTIBODY/ANTIGEN),03/10/95,MONOCLONAL ANTIBODY FAB D44.1 RAISED AGAINST CHICKEN EGG-WHITE LYSOZYME COMPLEXED WITH LYSOZYME,MUS MUSCULUS; GALLUS GALLUS,mus musculus,mus musculus,gallus gallus,"Braden, B.C., Souchon, H., Eisele, J.-L., Bentley, G.A., Bhat, T.N., Navaza, J., Poljak, R.J.",2.5,X-RAY DIFFRACTION,0.282,unknown,False,True,IGHV1,IGKV5,Kappa,9.1e-08,-9.6,SPR,25.0,10229844,1mlc_D_C_F,True
8zca,C,B,0,E,protein,,leukocyte surface antigen cd47,IMMUNE SYSTEM,05/07/25,Crystal structure of human CD47 ECD bound to Fab of Hu1C8,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Chen, Z., Ding, J.",2.5,X-RAY DIFFRACTION,0.266,0.215,False,True,IGHV3,IGKV1,Kappa,,,,,,8zca_C_B_E,False
9lrf,H,L,0,K,protein,,killer cell immunoglobulin-like receptor 2dl2,IMMUNE SYSTEM,10/15/25,Killer immunoglobulin receptor KIR2DL2 in complex with KIR2DL2_KIR2DL2/3 agonist 61-Fab,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Nishikawa, Y.",2.5,X-RAY DIFFRACTION,0.274,0.234,False,True,IGHV1,IGKV1,Kappa,,,,,,9lrf_H_L_K,False
8xse,M,N,0,A,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,07/17/24,SARS-CoV-2 RBD + IMCAS-123 + IMCAS-72 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Tong, Z., Cui, Y., Xie, Y., Tong, J., Gao, G.F., Qi, J.",2.5,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8xse_M_N_A,False
7k75,A,B,0,E,peptide,,pfcsp n-terminal peptide p17,IMMUNE SYSTEM,09/22/20,Crystal structure of MAD2-6 IgA Fab in complex with PfCSP N-terminal peptide.,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,plasmodium falciparum,"Pholcharee, T., Wilson, I.A.",2.5,X-RAY DIFFRACTION,0.236,0.192,False,True,IGHV4,IGKV1,Kappa,,,,,,7k75_A_B_E,False
8p6i,h,l,0,a,peptide,,unknown,IMMUNE SYSTEM,04/03/24,Crystal structure of the 139H2 Fab fragment bound to Muc1 peptide epitope,Homo sapiens; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,homo sapiens,"Beugelink, J.W., Peng, W., Siborova, M., Pronker, M.F., Snijder, J., Janssen, B.J.C.",2.5,X-RAY DIFFRACTION,0.254,0.203,False,False,IGHV1,IGKV8,Kappa,,,,,,8p6i_h_l_a,False
8ez3,H,L,0,A,protein,,neuraminidase,Hydrolase/Immune System,11/08/23,Structure of 3A10 Fab in complex with A/Moscow/10/1999 (H3N2) influenza virus neuraminidase,Homo sapiens; Influenza A virus (A/Moscow/10/1999(H3N2)),homo sapiens,homo sapiens,influenza a virus (a/moscow/10/1999(h3n2)),"Mou, Z., Lei, R., Wu, N.C., Dai, X.",2.5,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGLV1,Lambda,,,,,,8ez3_H_L_A,False
4hkx,A,B,0,E,protein,,hemagglutinin ha1,VIRAL PROTEIN/IMMUNE SYSTEM,10/15/12,Influenza hemagglutinin in complex with CH67 Fab,INFLUENZA A VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus,"Schmidt, A.G., Harrison, S.C.",2.5,X-RAY DIFFRACTION,0.219,0.187,False,True,IGHV1,IGLV3,Lambda,3.6e-07,-8.790776227275865,SPR,,TBD,4hkx_A_B_E,False
7chz,H,L,0,I,protein,,interleukin-1 beta,IMMUNOSUPPRESSANT,07/06/20,Crystal Structure Of Human Il-1beta In Complex With Antibody Binding Fragment Of IgG26A,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Lee, C.C., Wang, A.H.J., Kuo, W.C.",2.5,X-RAY DIFFRACTION,0.260,0.193,False,True,IGHV3,IGKV1,Kappa,,,,,,7chz_H_L_I,False
8g3p,H,L,0,E,protein,,neuraminidase,VIRAL PROTEIN/IMMUNE SYSTEM,05/31/23,N2 neuraminidase of A/Hong_Kong/2671/2019 in complex with 4 FNI9 Fab molecules,Homo sapiens; Influenza A virus,homo sapiens,homo sapiens,influenza a virus,"Dang, H.V., Snell, G.",2.5,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,8g3p_H_L_E,False
8v52,F,E,0,A,protein,,transforming growth factor beta-3,CYTOKINE/IMMUNE SYSTEM,04/10/24,Crystal structure of 2A10 Fab bound to Human TGF-beta3,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Yin, J., Lupardus, P.J.",2.5,X-RAY DIFFRACTION,0.269,0.221,False,True,IGHV3,IGKV1,Kappa,,,,,,8v52_F_E_A,False
7k7r,E,D,0,F,peptide,,ebna1 peptide aa386-405,IMMUNE SYSTEM,09/23/20,EBNA1 peptide AA386-405 with Fab MS39p2w174,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,human gammaherpesvirus 4,"Lanz, T.V., Robinson, W.H., Jude, K.M.",2.5,X-RAY DIFFRACTION,0.252,0.211,False,True,IGHV3,IGKV2,Kappa,,,,,,7k7r_E_D_F,False
8foi,H,L,0,A,protein,,gamma-aminobutyric acid receptor subunit alpha-1,MEMBRANE PROTEIN,01/08/09,"Native GABA-A receptor from the mouse brain, alpha1-beta2-gamma2 subtype, in complex with GABA and allopregnanolone",Mus musculus,mus musculus,mus musculus,mus musculus,"Sun, C., Gouaux, E.",2.5,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV6,Kappa,,,,,,8foi_H_L_A,False
8q3j,F,E,0,D,protein,,interleukin-1 family member 10,CYTOKINE,08/14/24,Crystal structure of mIL-38 in complex with a neutralizing Fab e04 fragment,Mus musculus,mus musculus,mus musculus,mus musculus,"Garcia-Pardo, J., Da Silva, P., Mora, J., Wiechmann, S., Putyrski, M., You, X., Kannt, A., Ernst, A., Brune, B., Weigert, A.",2.5,X-RAY DIFFRACTION,0.283,0.227,False,True,IGHV3,IGKV1,Kappa,,,,,,8q3j_F_E_D,False
6lxi,C,D,0,B,protein,,neuraminidase,HYDROLASE/IMMUNE SYSTEM,02/11/20,Crystal structure of Z2B3 Fab in complex with influenza virus neuraminidase from A/Brevig Mission/1/1918 (H1N1),INFLUENZA A VIRUS (STRAIN A/BREVIG MISSION/1/1918 H1N1); HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus (strain a/brevigmission/1/1918 h1n1) ,"Jiang, H., Peng, W., Qi, J., Chai, Y., Song, H., Shi, Y., Gao, G.F., Wu, Y.",2.5,X-RAY DIFFRACTION,0.212,0.183,False,True,IGHV1,IGLV2,Lambda,,,,,,6lxi_C_D_B,False
8the,H,L,0,A,protein,,heme/hemoglobin uptake outer membrane receptor phur,MEMBRANE PROTEIN,01/08/09,Cryo-EM structure of Pseudomonas aeruginosa TonB-dependent transporter PhuR in complex with synthetic antibody and heme,Homo sapiens; Pseudomonas aeruginosa,homo sapiens,homo sapiens,pseudomonas aeruginosa,"Knejski, P., Erramilli, S.K., Kossiakoff, A.A.",2.5,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8the_H_L_A,False
6b0a,H,L,0,A,protein,,25 kda ookinete surface antigen,IMMUNE SYSTEM,09/14/17,Crystal structure of Pfs25 in complex with the transmission blocking antibody 1269,HOMO SAPIENS; PLASMODIUM FALCIPARUM,homo sapiens,homo sapiens,plasmodium falciparum,"Scally, S.W., McLeod, B., Bosch, A., King, C.R., Julien, J.P.",2.5,X-RAY DIFFRACTION,0.249,0.217,False,True,IGHV3,IGKV3,Kappa,3.7000000000000005e-09,-11.503030961041176,BLI,,TBD,6b0a_H_L_A,False
2j4w,H,L,0,D,peptide,,apical membrane antigen 1,IMMUNE SYSTEM,09/07/06,Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12. 18 complex,PLASMODIUM VIVAX; MUS MUSCULUS,mus musculus,mus musculus,plasmodium vivax,"Igonet, S., Vulliez-Le Normand, B., Faure, G., Riottot, M.M., Kocken, C.H.M., Thomas, A.W., Bentley, G.A.",2.5,X-RAY DIFFRACTION,0.241,0.187,False,False,IGHV5,IGKV4,Kappa,6e-10,-12.57,SPR,,17229439,2j4w_H_L_D,False
4fqj,H,L,0,A,protein,,hemagglutinin,VIRAL PROTEIN/IMMUNE SYSTEM,06/25/12,Influenza B/Florida/4/2006 hemagglutinin Fab CR8071 complex,INFLUENZA B VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,influenza b virus,"Dreyfus, C., Laursen, N.S., Wilson, I.A.",2.5,X-RAY DIFFRACTION,0.265,0.230,False,True,IGHV1,IGLV1,Lambda,9e-10,-12.340621190735936,BLI,,TBD,4fqj_H_L_A,False
5sx5,H,L,0,N,protein,,epidermal growth factor receptor,TRANSFERASE/IMMUNE SYSTEM,08/09/16,Crystal Structure of panitumumab in complex with epidermal growth factor receptor domain 3 mutant S468R.,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Sickmier, E.A.",2.5,X-RAY DIFFRACTION,0.250,0.226,False,True,IGHV4,IGKV1,Kappa,1.15e-09,-12.195390134749903,SPR,,TBD,5sx5_H_L_N,False
5e8d,H,L,0,A,peptide,,proepiregulin,IMMUNE SYSTEM,10/14/15,Crystal structure of human epiregulin in complex with the Fab fragment of murine monoclonal antibody 9E5,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Kado, Y., Mizohata, E., Nagatoishi, S., Iijima, M., Shinoda, K., Miyafusa, T., Nakayama, T., Yoshizumi, T., Sugiyama, A., Kawamura, T., Lee, Y.H., Matsumura, H., Doi, H., Fujitani, H., Kodama, T., Shibasaki, Y., Tsumoto, K., Inoue, T.",2.5,X-RAY DIFFRACTION,0.263,0.190,False,False,IGHV14,IGKV19,Kappa,6.5e-09,-11.169184562689624,Unknown,,TBD,5e8d_H_L_A,False
9bt5,C,D,0,A,protein,,hemagglutinin,IMMUNE SYSTEM,06/25/25,The crystal structure of the HA1 domain of hemagglutinin from A/Shanghai/02/2013 (H7N9) bound to H7-235 Fab,Homo sapiens; Influenza A virus (A/Shanghai/02/2013(H7N9)),homo sapiens,homo sapiens,influenza a virus (a/shanghai/02/2013(h7n9)),"Buchman, C.D., Dong, J., Crowe, J.E.",2.5,X-RAY DIFFRACTION,0.251,0.195,False,True,IGHV3,IGKV2,Kappa,,,,,,9bt5_C_D_A,False
5occ,H,L,0,A,protein,,low affinity immunoglobulin gamma fc region receptor ii-b,IMMUNE SYSTEM,06/30/17,Crystal structure of CD32b (Fc Gamma Receptor IIb) in complex with Human IgG1 Fab fragment (6G08),HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Tews, I., Orr, C.",2.5,X-RAY DIFFRACTION,0.261,0.192,False,True,IGHV3,IGLV1,Lambda,,,,,,5occ_H_L_A,False
5k9q,X,Y,0,R,protein,,hemagglutinin ha2,IMMUNE SYSTEM,06/01/16,Crystal structure of multidonor HV1-18-class broadly neutralizing Influenza A antibody 16.a.26 in complex with A/Hong Kong/1-4-MA21-1/1968 (H3N2) Hemagglutinin,INFLUENZA A VIRUS; INFLUENZA A VIRUS (STRAIN A/HONG KONG/1/1968 H3N2); HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus (strain a/hong kong/1/1968h3n2) ,"Joyce, M.G., Thomas, P.V., Wheatley, A.K., McDermott, A.B., Mascola, J.R., Kwong, P.D.",2.503,X-RAY DIFFRACTION,0.218,0.182,False,True,IGHV1,IGKV1,Kappa,,,,,,5k9q_X_Y_R,False
7daa,H,L,0,A,protein,,isoform 2 of basigin,CHAPERONE,10/16/20,Crystal structure of basigin complexed with anti-basigin Fab fragment,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Sakuragi, T., Kanai, R., Narita, H., Onishi, E., Miyazaki, T., Baba, T., Nakagawa, A., Toyoshima, C., Nagata, S.",2.51,X-RAY DIFFRACTION,0.283,0.228,False,True,IGHV1,IGKV1,Kappa,,,,,,7daa_H_L_A,False
7x8t,C,B,0,A,protein,,frizzled-10,SIGNALING PROTEIN,02/01/23,Frizzled 10 CRD in complex with hB9L9.3 Fab,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Ge, Q., Wang, Q.",2.51,X-RAY DIFFRACTION,0.215,0.176,False,True,IGHV3,IGLV3,Lambda,,,,,,7x8t_C_B_A,False
8u32,C,B,0,A,protein,,programmed cell death protein 1,STRUCTURAL PROTEIN/IMMUNE SYSTEM,06/19/24,Crystal structure of PD-1 in complex with a Fab,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Sun, D., Masureel, M.",2.51,X-RAY DIFFRACTION,0.230,0.195,False,True,IGHV3,IGKV1,Kappa,,,,,,8u32_C_B_A,False
1v7m,H,L,0,V,protein,,thrombopoietin,IMMUNE SYSTEM/CYTOKINE,12/18/03,Human Thrombopoietin Functional Domain Complexed To Neutralizing Antibody TN1 Fab,MUS MUSCULUS; HOMO SAPIENS,mus musculus,mus musculus,homo sapiens,"Feese, M.D., Tamada, T., Kato, Y., Maeda, Y., Hirose, M., Matsukura, Y., Shigematsu, H., Kato, T., Miyazaki, H., Kuroki, R.",2.51,X-RAY DIFFRACTION,0.316,0.228,False,True,IGHV6,IGKV4,Kappa,,,,,,1v7m_H_L_V,False
8ywq,H,L,0,A,protein,,interleukin-6,IMMUNE SYSTEM,11/06/24,Crystal structure of the Fab fragment of the anti-IL-6 antibody I9H in complex with a domain-swapped IL-6 dimer,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Bukhdruker, S., Yudenko, A., Marin, E., Remeeva, A., Rodin, S., Burtseva, A., Petrov, A., Ischenko, A., Borshchevskiy, V.",2.51,X-RAY DIFFRACTION,0.277,0.239,False,True,IGHV2,IGKV1,Kappa,,,,,,8ywq_H_L_A,False
8wsp,B,C,0,A,protein,,gn,VIRAL PROTEIN/IMMUNE SYSTEM,06/12/24,Crystal structure of SFTSV Gn and antibody SF5,Homo sapiens; SFTS virus SD4,homo sapiens,homo sapiens,sfts virus sd4,"Chang, Z., Gao, F., Wu, Y.",2.51,X-RAY DIFFRACTION,0.243,0.195,False,True,IGHV3,IGLV3,Lambda,,,,,,8wsp_B_C_A,False
9b2w,E,F,0,D,protein,,hemagglutinin-neuraminidase,VIRAL PROTEIN/Immune System,12/04/24,PIV3 HN with Fab 13,Homo sapiens; Human respirovirus 3,homo sapiens,homo sapiens,human respirovirus 3,"Durie, I.A., Mousa, J.J.",2.51,X-RAY DIFFRACTION,0.264,0.219,False,True,IGHV3,IGKV2,Kappa,,,,,,9b2w_E_F_D,False
7e3o,H,L,0,R,protein,,spike protein s1,VIRAL PROTEIN,02/09/21,Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody nCoV617,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Chen, S.D., Yang, M.",2.51,X-RAY DIFFRACTION,0.259,0.204,False,True,IGHV3,IGLV1,Lambda,,,,,,7e3o_H_L_R,False
8gpy,E,F,0,A,protein,,spike protein s1,VIRAL PROTEIN,06/28/23,Crystal structure of Omicron BA.4/5 RBD in complex with a neutralizing antibody scFv,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Gao, Y.X., Song, Z.D., Wang, W.M., Guo, Y.",2.51,X-RAY DIFFRACTION,0.251,0.215,True,True,IGHV3,IGLV2,Lambda,,,,,,8gpy_E_F_A,False
6w05,H,L,0,P,peptide,,npna2 peptide,IMMUNE SYSTEM,02/29/20,Crystal structure of Fab356 in complex with NPNA2 peptide from circumsporozoite protein,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,plasmodium falciparum,"Pholcharee, T., Oyen, D., Wilson, I.A.",2.516,X-RAY DIFFRACTION,0.256,0.209,False,True,IGHV3,IGKV3,Kappa,,,,,,6w05_H_L_P,False
7bem,H,L,0,E,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,12/24/20,Crystal structure of the receptor binding domain of SARS-CoV-2 Spike glycoprotein in complex with COVOX-269 scFv,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, D., Zhao, Y., Ren, J., Stuart, D.",2.52,X-RAY DIFFRACTION,0.247,0.217,False,True,IGHV3,IGKV1,Kappa,,,,,,7bem_H_L_E,False
2bdn,H,L,0,A,protein,,small inducible cytokine a2,immune system,10/20/05,"Crystal structure of human MCP-1 bound to a blocking antibody, 11K2",MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,,"Boriack-Sjodin, P.A., Rushe, M., Reid, C., Jarpe, M, van Vlijmen, H, Bailly, V.",2.53,X-RAY DIFFRACTION,0.277,0.219,False,True,IGHV14,IGKV13,Kappa,4.6e-12,-15.46,Other,25.0,16682434,2bdn_H_L_A,True
8dpl,F,G,0,I,protein,,glycoprotein gp1,VIRAL PROTEIN/Immune System,07/19/23,Structure of EBOV GP lacking the mucin-like domain with 2.1.1D5 scFv and 6D6 scFv bound,"Ebola virus - Mayinga, Zaire, 1976; Homo sapiens; Mus musculus",homo sapiens,homo sapiens,"ebola virus - mayinga, zaire, 1976","Yu, X., Saphire, E.O.",2.53,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV1,Lambda,,,,,,8dpl_F_G_I,False
7bel,E,F,0,X,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,12/23/20,Crystal structure of the receptor binding domain of SARS-CoV-2 Spike glycoprotein in a ternary complex with COVOX-88 and COVOX-45 Fabs,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, D., Zhao, Y., Ren, J., Stuart, D.",2.53,X-RAY DIFFRACTION,0.286,0.249,False,True,IGHV4,IGLV1,Lambda,,,,,,7bel_E_F_X,False
7bel,A,B,0,R,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,12/23/20,Crystal structure of the receptor binding domain of SARS-CoV-2 Spike glycoprotein in a ternary complex with COVOX-88 and COVOX-45 Fabs,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, D., Zhao, Y., Ren, J., Stuart, D.",2.53,X-RAY DIFFRACTION,0.286,0.249,False,True,IGHV3,IGKV1,Kappa,,,,,,7bel_A_B_R,False
8fhy,H,L,0,I,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,01/17/24,Crystal structure of the SARS-CoV-2 receptor binding domain in complex with neutralizing antibody WRAIR-5021,Macaca mulatta; Severe acute respiratory syndrome coronavirus 2,macaca mulatta,macaca mulatta,severe acute respiratory syndrome coronavirus2 ,"Sankhala, R.S., Jensen, J.L., Joyce, M.G.",2.53,X-RAY DIFFRACTION,0.256,0.195,False,True,IGHV4,IGKV1,Kappa,,,,,,8fhy_H_L_I,False
9o4o,F,J,0,C,protein,,neuraminidase,VIRAL PROTEIN/IMMUNE SYSTEM,08/13/25,Cryo-EM structure of CR12044 Fab in complex with influenza virus neuraminidase from A/California/07/2009 (H1N1),Homo sapiens; Influenza A virus (A/California/07/2009(H1N1)),homo sapiens,homo sapiens,influenza a virus (a/california/07/2009(h1n1)),"Jo, G., Ward, A.B.",2.53,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV1,Lambda,,,,,,9o4o_F_J_C,False
7phu,B,C,0,A,protein,,reticulocyte-binding protein homolog 5,IMMUNE SYSTEM,08/18/21,PfRH5 bound to monoclonal antibody R5.015 and R5.016 Fab fragments,PLASMODIUM FALCIPARUM (ISOLATE 3D7); HOMO SAPIENS,homo sapiens,homo sapiens,plasmodium falciparum (isolate 3d7),"Ragotte, R.J., Higgins, M.K.",2.53,X-RAY DIFFRACTION,0.276,0.236,False,True,IGHV1,IGLV3,Lambda,,,,,,7phu_B_C_A,False
6bpa,E,F,0,D,protein,,"reticulocyte binding protein 2, putative",CELL INVASION,11/22/17,Plasmodium vivax reticulocyte binding protein 2b (PvRBP2b) bound to monoclonal antibody 3E9,PLASMODIUM VIVAX (STRAIN SALVADOR I); MUS MUSCULUS,mus musculus,mus musculus,plasmodium vivax (strain salvador i),"Gruszczyk, J., Chan, L.J., Tham, W.H.",2.53,X-RAY DIFFRACTION,0.225,0.194,False,False,IGHV14,IGKV17,Kappa,,,,,,6bpa_E_F_D,False
7sbu,H,L,0,A,protein,,spike protein s1,IMMUNE SYSTEM,09/25/21,Crystal structure of SARS-CoV-2 spike protein receptor-binding domain in complex with a highly potent antibody J08 Fab,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Liu, H., Wilson, I.A.",2.53,X-RAY DIFFRACTION,0.261,0.220,False,True,IGHV1,IGKV3,Kappa,,,,,,7sbu_H_L_A,False
7phu,D,E,0,A,protein,,reticulocyte-binding protein homolog 5,IMMUNE SYSTEM,08/18/21,PfRH5 bound to monoclonal antibody R5.015 and R5.016 Fab fragments,PLASMODIUM FALCIPARUM (ISOLATE 3D7); HOMO SAPIENS,homo sapiens,homo sapiens,plasmodium falciparum (isolate 3d7),"Ragotte, R.J., Higgins, M.K.",2.53,X-RAY DIFFRACTION,0.276,0.236,False,True,IGHV1,IGKV1,Kappa,,,,,,7phu_D_E_A,False
9oaq,H,L,0,C,protein,,germline-targeting hiv-1 gp120 engineered outer domain eod-gt8-mingly-n276 ,IMMUNE SYSTEM,06/25/25,Crystal structure of antibody Fab G001-59 from IAVI G001 human trial in complex with a germline-targeting gp120 engineered outer domain eOD-GT8-mingly-N276,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Lin, X., Wilson, I.A.",2.54,X-RAY DIFFRACTION,0.230,0.208,False,True,IGHV1,IGKV3,Kappa,,,,,,9oaq_H_L_C,False
8y6i,C,B,0,A,protein,,"atp-dependent translocase abcb1,mneongreen",MEMBRANE PROTEIN,04/17/24,P-glycoprotein in complex with UIC2 Fab and triple elacridar molecules in nanodisc,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Hamaguchi-Suzuki, N., Adachi, N., Moriya, T., Kawasaki, M., Suzuki, K., Anzai, N., Senda, T., Murata, T.",2.54,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,8y6i_C_B_A,False
9r2e,A,B,0,Q,protein,,isoform 1 of immunoglobulin heavy constant alpha 1,IMMUNE SYSTEM,05/14/25,Structure of ARGX-121 Fab fragment in complex with the Fc fragment of IgA1,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Pannecoucke, E., Voet, S., Deweirdt, L., Verbeiren, J., Gabriels, S., Provost, M., Freier, R., Koenig, J., Lammens, A., Silence, K.",2.54,X-RAY DIFFRACTION,0.252,0.211,False,True,IGHV3,IGLV1,Lambda,,,,,,9r2e_A_B_Q,False
8tfn,H,L,0,B,protein,,trbv6-5,IMMUNE SYSTEM,11/08/23,Structure of anti-TCRvbeta6-5 antibody in complex with the cognate TCR,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Katragadda, M., Servatalab, R., Wirth, J.",2.54,X-RAY DIFFRACTION,0.294,0.245,False,True,IGHV1,IGKV1,Kappa,,,,,,8tfn_H_L_B,False
9nab,D,C,0,A,protein,,integrin beta-1,IMMUNE SYSTEM,07/23/25,Cryo-EM structure of the alpha5beta1 integrin headpiece with OS2966 Fab,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Wang, L., Zhang, C.",2.54,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV12,Kappa,,,,,,9nab_D_C_A,False
5v6l,H,L,0,P,peptide,,"envelope glycoprotein, v3 region",VIRAL PROTEIN/IMMUNE SYSTEM,03/17/17,Crystal Structure of Rabbit Anti-HIV-1 gp120 V3 Fab 10A37 in complex with V3 peptide JR-FL,ORYCTOLAGUS CUNICULUS; SYNTHETIC CONSTRUCT,oryctolagus cuniculus,oryctolagus cuniculus,human immunodeficiency virus 1,"Pan, R., Kong, X.-P.",2.549,X-RAY DIFFRACTION,0.252,0.206,False,True,IGHV1,IGKV1,Kappa,,,,,,5v6l_H_L_P,False
3t2n,H,L,0,A,protein,,serine protease hepsin,HYDROLASE,07/22/11,Human hepsin protease in complex with the Fab fragment of an inhibitory antibody,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Koschubs, T., Dengl, S., Duerr, H., Kaluza, K., Georges, G., Hartl, C., Jennewein, S., Lanzendoerfer, M., Auer, J., Stern, A., Huang, K.-S., Kostrewa, D., Ries, S., Hansen, S., Kohnert, U., Cramer, P., Mundigl, O.",2.55,X-RAY DIFFRACTION,0.275,0.242,False,True,IGHV7,IGLV7,Lambda,3.98e-08,-10.5,SPR,37.0,22132769,3t2n_H_L_A,False
6x3t,K,L,0,D,protein,,gamma-aminobutyric acid receptor subunit alpha-1,MEMBRANE PROTEIN,05/21/20,Human GABAA receptor alpha1-beta2-gamma2 subtype in complex with GABA plus propofol,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Kim, J.J., Gharpure, A., Teng, J., Zhuang, Y., Howard, R.J., Zhu, S., Noviello, C.M., Walsh, R.M., Lindahl, E., Hibbs, R.E.",2.55,ELECTRON MICROSCOPY,,,False,False,IGHV14,IGKV6,Kappa,,,,,,6x3t_K_L_D,False
9o4p,F,J,0,C,protein,,neuraminidase,VIRAL PROTEIN/IMMUNE SYSTEM,08/13/25,Cryo-EM structure of AF9C-GL Fab in complex with influenza virus neuraminidase from A/California/07/2009 (H1N1),Homo sapiens; Influenza A virus (A/California/07/2009(H1N1)),homo sapiens,homo sapiens,influenza a virus (a/california/07/2009(h1n1)),"Jo, G., Ward, A.B.",2.55,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,9o4p_F_J_C,False
6ule,A,B,0,I,peptide,,circumsporozoite protein,IMMUNE SYSTEM,06/10/20,Crystal structure of 2541 Fab in complex with circumsporozoite protein NANP5,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,plasmodium falciparum,"Thai, E., Scally, S.W., Murugan, R., Wardemann, H., Julien, J.P.",2.55,X-RAY DIFFRACTION,0.259,0.209,False,True,IGHV3,IGKV1,Kappa,,,,,,6ule_A_B_I,False
7o2z,H,L,0,P,peptide,,p/a#1 epitope peptide,IMMUNE SYSTEM,04/01/21,Crystal structure of the anti-PAS Fab 2.2 in complex with its epitope peptide,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,synthetic construct,"Schilz, J., Schiefner, A., Skerra, A.",2.55,X-RAY DIFFRACTION,0.238,0.195,False,True,IGHV8,IGKV8,Kappa,,,,,,7o2z_H_L_P,False
1hi6,B,A,0,C,peptide,,peptide 5,IMMUNE SYSTEM/PEPTIDE,01/02/01,ANTI-P24 (HIV-1) FAB FRAGMENT CB41 COMPLEXED WITH A PEPTIDE,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,,"Hahn, M., Wessner, H., Schneider-Mergener, J., Hohne, W.",2.55,X-RAY DIFFRACTION,0.329,0.284,False,False,IGHV1,IGKV14,Kappa,,,,,,1hi6_B_A_C,False
6nmu,B,A,0,C,protein,,tyrosine-protein phosphatase non-receptor type substrate 1,IMMUNE SYSTEM,01/11/19,Kick-Off Fab 115 anti-SIRP-alpha antibody in complex with SIRP-alpha Variant 1,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Wibowo, A.S., Carter, J.J., Sim, J.",2.55,X-RAY DIFFRACTION,0.261,0.193,False,True,IGHV3,IGKV3,Kappa,,,,,,6nmu_B_A_C,False
6xkq,H,L,0,A,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,06/26/20,Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody CV07-250,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Yuan, M., Liu, H., Zhu, X., Wu, N.C., Wilson, I.A.",2.55,X-RAY DIFFRACTION,0.255,0.204,False,True,IGHV1,IGLV2,Lambda,,,,,,6xkq_H_L_A,False
6wtu,E,F,0,D,protein,,reticulocyte binding protein 2b,CELL INVASION,05/04/20,Plasmodium vivax reticulocyte binding protein 2b (PvRBP2b) bound to human monoclonal antibody 273264,PLASMODIUM VIVAX (STRAIN SALVADOR I); HOMO SAPIENS,homo sapiens,homo sapiens,plasmodium vivax (strain salvador i),"Chan, L.J., Dietrich, M.H., Tham, W.H.",2.55,X-RAY DIFFRACTION,0.255,0.208,False,True,IGHV3,IGLV3,Lambda,,,,,,6wtu_E_F_D,False
9mnt,H,L,0,E,protein,,hepatitis c virus envelope glycoprotein e2 core fromgenotype 6a ,VIRAL PROTEIN/IMMUNE SYSTEM,01/14/26,Structure of Hepatitis C virus envelope glycoprotein E2 core from genotype 6a bound to broadly neutralizing antibody RM1-73,Macaca mulatta; Recombinant Hepatitis C virus HK6a/JFH-1,macaca mulatta,macaca mulatta,recombinant hepatitis c virus hk6a/jfh-1,"Nguyen, T.K.Y., Stanfield, R.L., Wilson, I.A.",2.55,X-RAY DIFFRACTION,0.252,0.231,False,True,IGHV1,IGKV1,Kappa,,,,,,9mnt_H_L_E,False
6oz2,H,L,0,G,protein,,clade a/e 93th057 hiv-1 gp120 core,IMMUNE SYSTEM,05/15/19,Crystal structure of the broadly neutralizing antibody N49P6 Fab in complex with HIV-1 Clade A/E strain 93TH057 gp120 core.,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Tolbert, W.D., Pazgier, M.",2.55,X-RAY DIFFRACTION,0.273,0.219,False,True,unknown,IGLV2,Lambda,,,,,,6oz2_H_L_G,False
6q18,H,L,0,A,protein,,hemagglutinin,IMMUNE SYSTEM,08/03/19,Human antibody H1244 in complex with the influenza hemagglutinin head domain of A/Beijing/262/95(H1N1),INFLUENZA A VIRUS (A/BEIJING/262/1995(H1N1)); HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus (a/beijing/262/1995(h1n1)),"McCarthy, K.R., Harrison, S.C.",2.55,X-RAY DIFFRACTION,0.243,0.206,False,True,IGHV4,IGLV3,Lambda,,,,,,6q18_H_L_A,False
4lst,H,L,0,G,protein,,envelope glycoprotein gp120 of hiv-1 clade c,viral protein/immune system,07/23/13,Crystal structure of broadly and potently neutralizing antibody VRC01 in complex with HIV-1 clade C strain ZM176.66 gp120,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Zhou, T., Moquin, S., Kwong, P.D.",2.55,X-RAY DIFFRACTION,0.239,0.190,False,True,IGHV1,IGKV3,Kappa,,,,,,4lst_H_L_G,False
9bqw,H,L,0,A,protein,,decorin-binding protein a,IMMUNE SYSTEM,08/06/25,Fab F945-DbpA complex,Borreliella burgdorferi; Homo sapiens,homo sapiens,homo sapiens,borreliella burgdorferi,"Rudolph, M.J., Mantis, N.",2.55,X-RAY DIFFRACTION,0.246,0.202,False,True,IGHV3,IGKV1,Kappa,,,,,,9bqw_H_L_A,False
7dha,C,B,0,A,protein,,adp-ribosyl cyclase/cyclic adp-ribose hydrolase 1,IMMUNE SYSTEM,11/13/20,crystal structure of CD38 in complex with daratumumab,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Lee, H.T., Heo, Y.S.",2.55,X-RAY DIFFRACTION,0.261,0.207,False,True,IGHV3,IGKV3,Kappa,,,,,,7dha_C_B_A,False
9jin,H,L,0,A,protein,,pro-secreted protein orf2,VIRAL PROTEIN/IMMUNE SYSTEM,07/23/25,Rat hepatitis E virus capsid protein E2s domain in complex with Fab H4,Homo sapiens; Rocahepevirus ratti,homo sapiens,homo sapiens,rocahepevirus ratti,"Liu, L., Zheng, Q., Li, S.",2.56,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,9jin_H_L_A,False
5bo1,I,M,0,A,protein,,protein jagged-1,Signaling protein/Immune system,05/26/15,Crystal structure of a human Jag1 fragment in complex with an anti-Jag1 Fab,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Payandeh, J., de Leon-Boenig, G.",2.56,X-RAY DIFFRACTION,0.259,0.220,False,True,IGHV3,IGKV1,Kappa,7.900000000000001e-10,-12.41785844031504,SPR,,TBD,5bo1_I_M_A,False
9b3k,H,L,0,Z,protein,,nora-bril(3a) fusion,TRANSPORT PROTEIN/IMMUNE SYSTEM,12/11/24,NorA in complex with Fab36 (NorA-BRIL fusion),Homo sapiens; Staphylococcus aureus,homo sapiens,homo sapiens,staphylococcus aureus,"Xie, P., Li, Y., Kuang, H., Wang, D.N., Traaseth, N.J.",2.56,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,9b3k_H_L_Z,False
8us8,H,L,0,R,peptide,,ring-infected erythrocyte surface antigen peptide,IMMUNE SYSTEM,10/30/24,Crystal structure of B1E11K malarial antibody in complex with RESA repeat peptide,Homo sapiens; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,plasmodium falciparum,"Yoo, R., Julien, J.P.",2.56,X-RAY DIFFRACTION,0.248,0.216,False,True,IGHV3,IGKV3,Kappa,,,,,,8us8_H_L_R,False
4u6v,K,M,0,B,protein,,alpha-hemolysin,IMMUNE SYSTEM,07/29/14,Mechanisms of Neutralization of a Human Anti-Alpha Toxin Antibody,HOMO SAPIENS; STAPHYLOCOCCUS AUREUS SUBSP. AUREUS TCH60,homo sapiens,homo sapiens,staphylococcus aureus subsp. aureus tch60,"Oganesyan, V.Y., Peng, L., Damschroder, M.M., Cheng, L., Sadowska, A., Tkaczyk, C., Sellman, B., Wu, H., Dall'Acqua, W.F.",2.56,X-RAY DIFFRACTION,0.235,0.198,False,True,IGHV3,IGKV1,Kappa,1e-11,-15.006684983512798,SPR,,TBD,4u6v_K_M_B,False
9fm0,A,C,0,E,protein,,type iii secretion protein pcrv,IMMUNE SYSTEM,06/18/25,Human antibody (Fab) and P. aeruginosa (T3SS) protein PcrV-fragment complex,Homo sapiens; Pseudomonas aeruginosa,homo sapiens,homo sapiens,pseudomonas aeruginosa,"Desveaux, J.M., Contreras Martel, C., Dessen, A.",2.56,X-RAY DIFFRACTION,0.237,0.210,False,True,IGHV3,IGKV1,Kappa,,,,,,9fm0_A_C_E,False
8c7m,C,D,0,B,protein,,interleukin-12 receptor subunit beta-1,CYTOKINE,01/31/24,Interleukin 12 receptor subunit beta-1 Fn domains in complex with antagonistic FAb fragment.,Homo sapiens; Homo sapiens x Mus musculus hybrid cell line,homo sapiens x mus musculus hybrid cell line,homo sapiens x mus musculus hybrid cell line,homo sapiens,"Bloch, Y., Savvides, S.N.",2.56,X-RAY DIFFRACTION,0.228,0.203,False,True,IGHV3,IGKV1,Kappa,,,,,,8c7m_C_D_B,False
7cho,B,C,0,A,protein,,spike protein s1,VIRAL PROTEIN,07/06/20,Crystal structure of SARS-CoV-2 antibody P5A-1D2 with RBD,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Wang, X., Zhang, L., Ge, J., Wang, R., Zhang, Q.",2.561,X-RAY DIFFRACTION,0.247,0.202,False,True,IGHV3,IGLV1,Lambda,,,,,,7cho_B_C_A,False
8e1g,H,L,0,A,protein,,spike protein s1,VIRAL PROTEIN,06/28/23,SARS-CoV-2 RBD in complex with Omicron-neutralizing antibody 2A10,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Wasserman, H., Hastie, K.M., Buck, T.K., Saphire, E.O.",2.57,X-RAY DIFFRACTION,0.244,0.196,False,True,IGHV3,IGKV1,Kappa,,,,,,8e1g_H_L_A,False
1nak,H,L,0,P,peptide,,peptide mp1,IMMUNE SYSTEM,11/27/02,IGG1 FAB FRAGMENT (83.1) COMPLEX WITH 16-RESIDUE PEPTIDE (RESIDUES 304-321 OF HIV-1 GP120 (MN ISOLATE)),MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,,"Stanfield, R.L., Ghiara, J.B., Ollmann Saphire, E., Profy, A.T., Wilson, I.A.",2.57,X-RAY DIFFRACTION,0.326,0.288,False,False,IGHV3,IGKV1,Kappa,,,,,,1nak_H_L_P,False
6n81,H,L,0,A,protein,,major capsid protein,IMMUNE SYSTEM,11/28/18,Crystal structure of GII.4 2002 norovirus P domain in complex with cross-reactive human antibody A1227,NOROVIRUS HU/GII.4/FARMINGTON HILLS/2004/USA; HOMO SAPIENS,homo sapiens,homo sapiens,norovirus hu/gii.4/farmington hills/2004/usa,"Changela, A., Verardi, R., Kwong, P.D.",2.579,X-RAY DIFFRACTION,0.211,0.173,False,True,IGHV3,IGKV1,Kappa,,,,,,6n81_H_L_A,False
9pd2,H,L,0,A,protein,,paired immunoglobulin-like type 2 receptor alpha,SIGNALING PROTEIN,12/17/25,Crystal structure of PILRA in complex with Fab portion of antagonist antibody,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Kung, J.E.",2.579,X-RAY DIFFRACTION,0.277,0.226,False,True,IGHV1,IGKV1,Kappa,,,,,,9pd2_H_L_A,False
3b2u,J,K,0,I,protein,,epidermal growth factor receptor,IMMUNE SYSTEM/TRANSFERASE,10/19/07,Crystal structure of isolated domain III of the extracellular region of the epidermal growth factor receptor in complex with the Fab fragment of IMC-11F8,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Ferguson, K.M., Li, S., Kussie, P.",2.58,X-RAY DIFFRACTION,0.291,0.227,False,True,IGHV4,IGKV3,Kappa,1e-09,-12.27,SPR,25.0,18275813,3b2u_J_K_I,False
7s11,H,L,0,C,protein,,t-cell surface protein tactile,IMMUNE SYSTEM,08/31/21,Crystal structure of Fab in complex with mouse CD96 monomer,MUS MUSCULUS; RATTUS,rattus,rattus,mus musculus,"Lee, P.S., Chau, B., Strop, P.",2.58,X-RAY DIFFRACTION,0.279,0.226,False,True,IGHV2,IGLV1,Lambda,,,,,,7s11_H_L_C,False
9oao,H,L,0,C,protein,,germline-targeting hiv-1 gp120 engineered outer domain eod-gt8-mingly ,IMMUNE SYSTEM,06/25/25,Crystal structure of antibody Fab G001-0087 from IAVI G001 human trial in complex with a germline-targeting gp120 engineered outer domain eOD-GT8-mingly,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Lin, X., Wilson, I.A.",2.58,X-RAY DIFFRACTION,0.253,0.238,False,True,IGHV1,IGKV3,Kappa,,,,,,9oao_H_L_C,False
6xkr,H,L,0,P,protein,,programmed cell death protein 1,ANTITUMOR PROTEIN/IMMUNE SYSTEM,06/27/20,Structure of Sasanlimab Fab in complex with PD-1,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Kimberlin, C.R., Chin, S.M.",2.59,X-RAY DIFFRACTION,0.271,0.219,False,True,IGHV1,IGKV4,Kappa,,,,,,6xkr_H_L_P,False
8w0v,H,L,0,C,protein,,envelope glycoprotein e2,IMMUNE SYSTEM/VIRAL PROTEIN,03/27/24,Crystal structure of broadly neutralizing antibody hcab55 in complex with Hepatitis C virus envelope glycoprotein E2 ectodomain,Hepacivirus hominis; Homo sapiens,homo sapiens,homo sapiens,hepacivirus hominis,"Flyak, A.I., Wilcox, X.E.",2.59,X-RAY DIFFRACTION,0.257,0.202,False,True,IGHV1,IGKV3,Kappa,,,,,,8w0v_H_L_C,False
9ml9,H,L,0,A,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,06/04/25,Crystal structure of the SARS-CoV-2 RBD in complex with the rabbit M8b-C9 Fab,Oryctolagus cuniculus; Severe acute respiratory syndrome coronavirus 2,oryctolagus cuniculus,oryctolagus cuniculus,severe acute respiratory syndrome coronavirus2 ,"Fan, C., Bjorkman, P.J.",2.59,X-RAY DIFFRACTION,0.257,0.226,False,True,IGHV1,IGKV1,Kappa,,,,,,9ml9_H_L_A,False
7uvh,A,B,0,C,protein,,gametocyte surface protein p230,CELL INVASION/IMMUNE SYSTEM,02/15/23,Pfs230 domain 1 bound by RUPA-32 Fab,Homo sapiens; Plasmodium falciparum,homo sapiens,homo sapiens,plasmodium falciparum,"Ivanochko, D., Newton, J., Julien, J.P.",2.59,X-RAY DIFFRACTION,0.233,0.196,False,True,IGHV3,IGKV3,Kappa,,,,,,7uvh_A_B_C,False
6wfx,H,L,0,P,peptide,,npna2 peptide,IMMUNE SYSTEM,04/04/20,Crystal structure of Fab395 in complex with NPNA2 peptide from circumsporozoite protein,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,plasmodium falciparum,"Pholcharee, T., Oyen, D., Wilson, I.A.",2.59,X-RAY DIFFRACTION,0.244,0.198,False,True,IGHV3,IGKV1,Kappa,,,,,,6wfx_H_L_P,False
7t7b,H,L,0,A,protein,,spike protein s1,IMMUNE SYSTEM/VIRAL PROTEIN,08/03/22,Crystal structure of SARS-CoV-2 spike protein receptor-binding domain in complex with a cross-neutralizing antibody ADI-62113 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Liu, H., Wilson, I.A.",2.59,X-RAY DIFFRACTION,0.267,0.221,False,True,IGHV1,IGKV1,Kappa,,,,,,7t7b_H_L_A,False
4zpt,A,B,0,R,protein,,spike glycoprotein,Viral protein/Immune system,05/08/15,Structure of MERS-Coronavirus Spike Receptor-binding Domain (England1 Strain) in Complex with Vaccine-Elicited Murine Neutralizing Antibody D12 (Crystal Form 1),HUMAN CORONAVIRUS EMC (ISOLATE UNITED KINGDOM/H123990006/2012); MUS MUSCULUS,mus musculus,mus musculus,human coronavirus emc (isolate unitedkingdom/h123990006/2012) ,"Joyce, M.G., Mascola, J.R., Graham, B.S., Kwong, P.D.",2.591,X-RAY DIFFRACTION,0.244,0.204,False,False,IGHV5,IGKV10,Kappa,9.93e-09,-10.91811468499047,BLI,,TBD,4zpt_A_B_R,False
9nph,B,A,0,C,protein,,major allergen can f 1,ALLERGEN/IMMUNE SYSTEM,08/27/25,X-ray crystal structure of recombinant Can f 1 in complex with human IgE mAb 1J11 Fab,Canis lupus familiaris; Homo sapiens,homo sapiens,homo sapiens,canis lupus familiaris,"Khatri, K., Ball, A., Smith, S.A., Champan, M.D., Pomes, A., Chruszcz, M.",2.592,X-RAY DIFFRACTION,0.261,0.215,False,True,IGHV3,IGLV3,Lambda,,,,,,9nph_B_A_C,False
8tbq,H,L,0,P,protein,,v-type immunoglobulin domain-containing suppressor of t-cell activation ,"PROTEIN BINDING,IMMUNE SYSTEM",03/20/24,The crystal structure of human VISTA extra cellular domain in complex with Fab fragment of pH-selective anti-VISTA antibody,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"van der Horst, E.H., Mukherjee, A., Thisted, T.",2.593,X-RAY DIFFRACTION,0.291,0.237,False,True,IGHV3,IGKV1,Kappa,,,,,,8tbq_H_L_P,False
8tbq,A,B,0,Q,protein,,v-type immunoglobulin domain-containing suppressor of t-cell activation ,"PROTEIN BINDING,IMMUNE SYSTEM",03/20/24,The crystal structure of human VISTA extra cellular domain in complex with Fab fragment of pH-selective anti-VISTA antibody,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"van der Horst, E.H., Mukherjee, A., Thisted, T.",2.593,X-RAY DIFFRACTION,0.291,0.237,False,True,IGHV3,IGKV1,Kappa,,,,,,8tbq_A_B_Q,False
5mo9,H,L,0,X,protein,,bdnf/nt-3 growth factors receptor,IMMUNE SYSTEM,12/14/16,Structure of human TrkB receptor ligand binding domain in complex with the Fab frgment of antibody AB20,MUS MUSCULUS; HOMO SAPIENS,mus musculus,mus musculus,homo sapiens,"Hoerer, S.",2.594,X-RAY DIFFRACTION,0.224,0.190,False,True,IGHV1,IGKV1,Kappa,,,,,,5mo9_H_L_X,False
6ktr,A,B,0,C,protein,,fibroblast growth factor 19,IMMUNE SYSTEM/PROTEIN BINDING,08/28/19,Crystal structure of fibroblast growth factor 19 in complex with Fab,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Liu, H., Zheng, S., Hou, X., Liu, X., Lv, X., Li, Y., Li, W., Sui, J.",2.59776,X-RAY DIFFRACTION,0.253,0.202,False,True,IGHV3,IGLV2,Lambda,,,,,,6ktr_A_B_C,False
6xpx,B,C,0,A,protein,,hemagglutinin,IMMUNE SYSTEM/VIRAL PROTEIN,07/09/20,Human antibody S1V2-51 in complex with the influenza hemagglutinin head domain of A/Aichi/2/1968 (X-31)(H3N2),INFLUENZA A VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus,"McCarthy, K.R., Harrison, S.C.",2.598,X-RAY DIFFRACTION,0.215,0.185,False,True,IGHV3,IGKV4,Kappa,,,,,,6xpx_B_C_A,False
6dca,J,N,0,R,peptide,,microtubule-associated protein tau,IMMUNE SYSTEM,05/04/18,Fab/epitope complex of mouse monoclonal antibody 6B2 targeting a non-phosphorylated tau epitope.,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Chukwu, J.E., Kong, X.-P.",2.599,X-RAY DIFFRACTION,0.259,0.189,False,False,IGHV1,IGKV1,Kappa,,,,,,6dca_J_N_R,False
6db5,I,M,0,Q,peptide,,hiv-1 gp120 v3 peptide from ny5 strain,IMMUNE SYSTEM,05/02/18,Crystal structure of anti-HIV-1 V3 Fab TA6 in complex with a HIV-1 gp120 V3 peptide from NY5 strain,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Chan, K.-W., Kong, X.-P.",2.599,X-RAY DIFFRACTION,0.283,0.227,False,True,IGHV1,IGLV3,Lambda,,,,,,6db5_I_M_Q,False
7kd6,C,D,0,E,protein,,insulin receptor subunit alpha,SIGNALING PROTEIN,10/08/20,Insulin Receptor L1-CR plus alphaCT fragment in co-complex with Fv 83-7 and single-chain insulin SCI-b,HOMO SAPIENS; MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Lawrence, M.C., Menting, J.G.",2.6,X-RAY DIFFRACTION,0.221,0.189,False,True,IGHV2,IGKV8,Kappa,,,,,,7kd6_C_D_E,False
8too,B,A,0,I,protein,,glycoprotein 42,IMMUNE SYSTEM,03/27/24,Crystal structure of Epstein-Barr virus gp42 in complex with antibody 4C12,Epstein-Barr virus; Mus musculus,mus musculus,mus musculus,epstein-barr virus,"Bu, W., Kumar, A., Board, N., Kim, J., Dowdell, K., Zhang, S., Lei, Y., Hostal, A., Krogmann, T., Wang, Y., Pittaluga, S., Marcotrigiano, J., Cohen, J.I.",2.6,X-RAY DIFFRACTION,0.275,0.226,False,True,IGHV1,IGKV10,Kappa,,,,,,8too_B_A_I,False
5bk2,C,D,0,B,protein,,maltose-binding periplasmic protein,SUGAR BINDING PROTEIN,09/12/17,Crystal structure of maltose binding protein in complex with a peristeric synthetic antibody,ESCHERICHIA COLI; HOMO SAPIENS,homo sapiens,homo sapiens,escherichia coli,"Mukherjee, S., Kossiakoff, A.A.",2.6,X-RAY DIFFRACTION,0.259,0.212,False,True,IGHV3,IGKV1,Kappa,,,,,,5bk2_C_D_B,False
4jr9,H,L,0,A,protein,,nitrite extrusion protein 1,TRANSPORT PROTEIN/Immune System,03/21/13,Crystal structure of nitrate/nitrite exchanger NarK,ESCHERICHIA COLI; MUS MUSCULUS,mus musculus,mus musculus,escherichia coli,"Zheng, H., Wisedchaisri, G., Gonen, T.",2.6,X-RAY DIFFRACTION,0.261,0.229,False,False,IGHV9,IGKV19,Kappa,,,,,,4jr9_H_L_A,False
7rta,H,L,0,N,peptide,,neuropeptide y,HORMONE/IMMUNE SYSTEM,08/12/21,Crystal structures of human PYY and NPY,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,homo sapiens,"Langley, D.B., Christ, D.",2.6,X-RAY DIFFRACTION,0.270,0.217,False,True,IGHV1,IGKV1,Kappa,,,,,,7rta_H_L_N,False
6bfq,A,B,0,I,protein,,granulocyte-macrophage colony-stimulating factor,IMMUNE SYSTEM,10/26/17,The mechanism of GM-CSF inhibition by human GM-CSF auto-antibodies,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Dhagat, U., Hercus, T.R., Broughton, S.E., Nero, T.L., Lopez, A.F., Parker, M.W.",2.6,X-RAY DIFFRACTION,0.264,0.230,False,True,IGHV4,IGKV1,Kappa,,,,,,6bfq_A_B_I,False
6j15,A,B,0,C,protein,,programmed cell death protein 1,IMMUNE SYSTEM,12/27/18,Complex structure of GY-5 Fab and PD-1,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Chen, D., Tan, S., Zhang, H., Wang, H., Chai, Y., Qi, J., Yan, J., Gao, G.F.",2.6,X-RAY DIFFRACTION,0.277,0.212,False,False,IGHV1,IGKV1,Kappa,,,,,,6j15_A_B_C,False
8zyf,H,D,0,A,protein,,spike protein s1,VIRAL PROTEIN,03/26/25,Crystal structure of ZW2G10 Fab in complex with omicron RBD,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Yuan, H.Y., Li, J.M.",2.6,X-RAY DIFFRACTION,0.285,0.232,False,True,IGHV3,IGLV1,Lambda,,,,,,8zyf_H_D_A,False
8zyf,E,C,0,B,protein,,spike protein s1,VIRAL PROTEIN,03/26/25,Crystal structure of ZW2G10 Fab in complex with omicron RBD,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Yuan, H.Y., Li, J.M.",2.6,X-RAY DIFFRACTION,0.285,0.232,False,True,IGHV3,IGLV1,Lambda,,,,,,8zyf_E_C_B,False
5w08,G,H,0,A,protein,,hemagglutinin ha1,VIRAL PROTEIN/IMMUNE SYSTEM,05/30/17,A/Texas/50/2012(H3N2) Influenza hemagglutinin in complex with K03.12 Fab,INFLUENZA A VIRUS (A/TEXAS/50/2012(H3N2)); HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus (a/texas/50/2012(h3n2)),"McCarthy, K.R., Harrison, S.C.",2.6,X-RAY DIFFRACTION,0.262,0.240,False,True,IGHV1,IGLV2,Lambda,4e-08,-10.092595930642474,SPR,,TBD,5w08_G_H_A,False
9x1h,I,M,0,B,protein,,complement c1s subcomponent heavy chain,IMMUNE SYSTEM,11/19/25,Cryo-EM Structure of human complement C1s CUB domain in complex with RAY121,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Kawauchi, H., Adrian, H., Gupta, G., Koga, H., Fujii, T., Fukumura, T., Ishino, S., Irie, M., Torizawa, T.",2.6,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV1,Kappa,,,,,,9x1h_I_M_B,False
2mpa,H,L,0,P,peptide,,conjugate of pora p1.16 peptide with fluorescein,IMMUNE SYSTEM,06/09/99,BACTERICIDAL ANTIBODY AGAINST NEISSERIA MENINGITIDIS,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,,"Van Den Elsen, J.M.H., Herron, J.N., Kroon, J., Gros, P.",2.6,X-RAY DIFFRACTION,0.264,0.202,False,False,IGHV1,IGKV1,Kappa,9.1e-09,-10.969830253718456,Unknown,,TBD,2mpa_H_L_P,False
2eh8,H,L,0,P,peptide,,pres1/pres2/surface protein,IMMUNE SYSTEM,03/05/07,Crystal structure of the complex of humanized KR127 fab and PRES1 peptide epitope,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,,"Chi, S.-W., Kim, S.-J., Maeng, C.-Y., Hong, H.J., Ryu, S.-E.",2.6,X-RAY DIFFRACTION,0.258,0.193,False,True,IGHV1,IGKV1,Kappa,1.1e-08,-11.29,Other,37.0,17517649,2eh8_H_L_P,False
7y3j,H,L,0,A,peptide,,ala-leu-val-phe-phe-ala-pro-ala-val-gly-ser,IMMUNE SYSTEM,08/17/22,24B3 antibody-peptide complex,Mus musculus; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Irie, K., Irie, Y., Kita, A., Miki, K.",2.6,X-RAY DIFFRACTION,0.261,0.222,False,False,IGHV1,IGKV1,Kappa,,,,,,7y3j_H_L_A,False
4jb9,H,L,0,G,protein,,clade a/e 93th057 hiv-1 gp120 core,viral protein/immune system,02/19/13,Crystal structure of antibody VRC06 in complex with HIV-1 gp120 core,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Kwon, Y.D., Zhou, T., Srivatsan, S., Kwong, P.D.",2.6,X-RAY DIFFRACTION,0.287,0.247,False,True,IGHV1,IGKV3,Kappa,,,,,,4jb9_H_L_G,False
7zjl,j,i,0,B,protein,,spike glycoprotein,VIRAL PROTEIN,04/19/23,Delta SARS-CoV-2 spike protein in complex with REGN10987 Fab homologue.,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Pichkur, E.B., Lyukmanova, E.N., Shenkarev, Z.O.",2.6,ELECTRON MICROSCOPY,,,False,False,IGHV3,IGLV2,Lambda,,,,,,7zjl_j_i_B,False
6e63,H,L,0,P,protein,,pf48/45,IMMUNE SYSTEM,07/23/18,Crystal structure of malaria transmission-blocking antigen Pfs48/45 6C in complex with antibody TB31F,PLASMODIUM FALCIPARUM; HOMO SAPIENS,homo sapiens,homo sapiens,plasmodium falciparum,"Kundu, P., Semesi, A., Julien, J.P.",2.6,X-RAY DIFFRACTION,0.240,0.202,False,True,IGHV3,IGLV6,Lambda,3.7000000000000005e-09,-11.503030961041176,SPR,,TBD,6e63_H_L_P,False
7xjf,A,B,0,C,protein,,leukocyte surface antigen cd47,IMMUNE SYSTEM,05/31/23,Crystal structure of 6MW3211 Fab in complex with CD47,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Wang, J., Wang, R., Jiao, S., Wang, S., Zhang, J., Zhang, M., Wang, M.",2.6,X-RAY DIFFRACTION,0.231,0.187,False,True,IGHV1,IGKV1,Kappa,,,,,,7xjf_A_B_C,False
7x9e,A,B,0,E,peptide,,spike peptide,IMMUNE SYSTEM/VIRAL PROTEIN,03/15/22,Crystal structure of the 76E1 Fab in complex with a SARS-CoV-2 spike peptide,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Chen, X., Zhang, T., Ding, J., Sun, X., Sun, B.",2.6,X-RAY DIFFRACTION,0.243,0.195,False,True,IGHV3,IGLV2,Lambda,,,,,,7x9e_A_B_E,False
6vy6,H,L,0,A,protein,,receptor binding protein,VIRAL PROTEIN/IMMUNE SYSTEM,02/25/20,Crystal structure of Hendra receptor binding protein head domain in complex with human neutralizing antibody HENV-26,HENDRA HENIPAVIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,hendra henipavirus,"Dong, J., Crowe, J.E.",2.6,X-RAY DIFFRACTION,0.247,0.197,False,True,IGHV3,IGLV3,Lambda,,,,,,6vy6_H_L_A,False
3efd,H,L,0,K,peptide,,kcsa,IMMUNE SYSTEM,09/08/08,The crystal structure of the cytoplasmic domain of KcsA,MUS MUSCULUS; ESCHERICHIA COLI,mus musculus,mus musculus,escherichia coli,"Uysal, S., Vasquez, V., Tereshko, V., Esaki, K., Fellouse, F.A., Sidhu, S.S., Koide, S., Perozo, E., Kossiakoff, A.",2.6,X-RAY DIFFRACTION,0.276,0.225,False,False,IGHV3,IGKV1,Kappa,,,,,,3efd_H_L_K,False
7lxz,G,I,0,B,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,03/05/21,SARS-CoV-2 S/S2M11/S2L28 Global Refinement,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"McCallum, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)",2.6,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV2,Lambda,,,,,,7lxz_G_I_B,False
7rah,D,C,0,E,protein,,"bifunctional adenylate cyclase toxin/hemolysin cyaa,bifunctional adenylate cyclase toxin/hemolysin cyaa ",IMMUNE SYSTEM/TOXIN,07/01/21,Adenylate cyclase toxin RTX domain fragment bound to M1H5 Fab and M2B10 Fab,MUS MUSCULUS; BORDETELLA PERTUSSIS,mus musculus,mus musculus,bordetella pertussis,"Goldsmith, J.A., McLellan, J.S.",2.6,X-RAY DIFFRACTION,0.218,0.195,False,True,IGHV1,IGKV4,Kappa,,,,,,7rah_D_C_E,False
6hga,H,L,0,B,protein,,interleukin-17 receptor c,IMMUNE SYSTEM,08/23/18,Crystal Structure of the human IL-17RC D2-D3-D4 domains in complex with an anti-APP tag Fab,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Rondeau, J.M., Goepfert, A.",2.6,X-RAY DIFFRACTION,0.232,0.205,False,True,IGHV8,IGKV1,Kappa,,,,,,6hga_H_L_B,False
2xqb,H,L,0,A,protein,,interleukin 15,IMMUNE SYSTEM,09/01/10,Crystal Structure of anti-IL-15 Antibody in Complex with human IL-15,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Lowe, D.C., Gerhardt, S., Ward, A., Hargreaves, D., Anderson, M., StGallay, S., Vousden, K., Ferraro, F., Pauptit, R.A., Cochrane, D., Pattison, D.V., Buchanan, C., Popovic, B., Finch, D.K., Wilkinson, T., Sleeman, M., Vaughan, T.J., Cruwys, S., Mallinder, P.R.",2.6,X-RAY DIFFRACTION,0.31811,0.24441,False,True,IGHV1,IGLV1,Lambda,5.2e-11,-14.02,SPR,,21167836,2xqb_H_L_A,False
1f90,H,L,0,E,peptide,,antigenic nonapeptide,IMMUNE SYSTEM,07/06/00,FAB FRAGMENT OF MONOCLONAL ANTIBODY (LNKB-2) AGAINST HUMAN INTERLEUKIN-2 IN COMPLEX WITH ANTIGENIC PEPTIDE,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,,"Afonin, P.V., Fokin, A.V., Tsigannik, I.N., Mikhailova, I.Y., Onoprienko, L.V., Mikhaleva, I.I., Ivanov, V.T., Mareeva, T.Y., Nesmeyanov, V.A., Li, N., Duax, W.L., Pletnev, V.Z.",2.6,X-RAY DIFFRACTION,0.245,0.165,False,False,IGHV3,IGKV1,Kappa,1.19e-08,-10.8,Other,,11468348,1f90_H_L_E,False
6vtw,H,L,0,A,peptide,,s4_2.45,IMMUNE SYSTEM,02/13/20,Crystal Structure of a computationally designed Immunogen S4_2.45 in complex with 101F,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,human respiratory syncytial virus a2,"Jardetzky, T., Correia, B.",2.6,X-RAY DIFFRACTION,0.283,0.207,False,True,IGHV8,IGKV3,Kappa,,,,,,6vtw_H_L_A,False
9lra,H,L,0,K,protein,,killer cell immunoglobulin-like receptor 2dl2,IMMUNE SYSTEM,10/15/25,Killer immunoglobulin receptor KIR2DL2 in complex with Pan2D Fab,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Nishikawa, Y.",2.6,X-RAY DIFFRACTION,0.252,0.220,False,True,IGHV1,IGKV4,Kappa,,,,,,9lra_H_L_K,False
9sfx,B,A,0,C,protein,,interleukin-17a,CYTOKINE,10/29/25,Secukinumab Fv in complex with human IL-17A,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Rondeau, J.-M., Lehmann, S.",2.6,X-RAY DIFFRACTION,0.213,0.177,False,True,IGHV3,IGKV3,Kappa,,,,,,9sfx_B_A_C,False
4hs8,H,L,0,A,peptide,,e2-peptide,IMMUNE SYSTEM,10/29/12,Hepatitus C envelope glycoprotein E2 fragment 412-423 with humanized and affinity-matured antibody hu5B3.v3,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,hepatitis c virus,"Eigenbrot, C., Ultsch, M.",2.6,X-RAY DIFFRACTION,0.264,0.222,False,True,IGHV3,IGKV1,Kappa,1.2000000000000002e-08,-10.805930168369423,Unknown,,TBD,4hs8_H_L_A,False
8q5y,G,H,0,E,protein,,spike glycoprotein,VIRAL PROTEIN,07/17/24,cryoEM structure of SARS-CoV2 Spike trimer in complex with Fab23,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Hallberg, M., Das, H.",2.6,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8q5y_G_H_E,False
1tzh,B,A,0,W,protein,,vascular endothelial growth factor a,immune system,07/09/04,Crystal Structure of the Fab YADS1 Complexed with h-VEGF,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Fellouse, F.A., Wiesmann, C., Sidhu, S.S.",2.6,X-RAY DIFFRACTION,0.271,0.212,False,True,IGHV5,IGKV12,Kappa,1.8e-09,-12.4,SPR,37.0,15306681,1tzh_B_A_W,False
6fy3,X,Y,0,Z,peptide,,cap45 v2 peptide,IMMUNE SYSTEM,03/10/18,"Crystal structure of a V2-directed, RV144 vaccine-like antibody from HIV-1 infection, CAP228-3D, bound to a heterologous V2 peptide",HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Wibmer, C.K., Moore, P.L., Morris, L.",2.6,X-RAY DIFFRACTION,0.250,0.220,False,True,IGHV5,IGLV6,Lambda,,,,,,6fy3_X_Y_Z,False
6f7t,H,L,0,C,peptide,,ribonuclease y,IMMUNE SYSTEM,12/11/17,Crystal Structure of an Fab fragment in complex with a peptide from Bacillus subtilis RNase Y,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,bacillus subtilis,"Golinelli-Pimpaneau, B., Hardouin, P.",2.6,X-RAY DIFFRACTION,0.253,0.202,False,False,IGHV9,IGLV3,Lambda,3.6e-10,-12.883508495506629,Unknown,,TBD,6f7t_H_L_C,False
9sfx,H,L,0,C,protein,,interleukin-17a,CYTOKINE,10/29/25,Secukinumab Fv in complex with human IL-17A,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Rondeau, J.-M., Lehmann, S.",2.6,X-RAY DIFFRACTION,0.213,0.177,False,True,IGHV3,IGKV1,Kappa,,,,,,9sfx_H_L_C,False
7lbg,F,E,0,A,protein,,envelope glycoprotein h,VIRAL PROTEIN/Immune System,01/07/21,CryoEM structure of the HCMV Trimer gHgLgO in complex with human Transforming growth factor beta receptor type 3 and neutralizing fabs 13H11 and MSL-109,HUMAN CYTOMEGALOVIRUS (STRAIN MERLIN); HUMAN CYTOMEGALOVIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,human cytomegalovirus (strain merlin),"Kschonsak, M., Rouge, L., Arthur, C.P., Hoangdung, H., Patel, N., Kim, I., Johnson, M., Kraft, E., Rohou, A.L., Gill, A., Martinez-Martin, N., Payandeh, J., Ciferri, C.",2.6,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,7lbg_F_E_A,False
6d2p,H,L,0,C,protein,,germline-targeting hiv-1 gp120 engineered outer domain eod-gt8 ,IMMUNE SYSTEM,04/13/18,Crystal structure of IOMA-class CLK31 Fab from an HIV-1 naive donor in complex with a germline-targeting gp120 engineered outer domain eOD-GT8 at 2.6 A,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Sarkar, A., Wilson, I.A.",2.6,X-RAY DIFFRACTION,0.268,0.213,False,True,IGHV1,IGLV2,Lambda,,,,,,6d2p_H_L_C,False
9nqz,G,F,0,B,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,11/12/25,cryo-EM structure of broad betacoronavirus binding antibody 1871 in complex with OC43 S2 subunit,Homo sapiens; Human coronavirus OC43,homo sapiens,homo sapiens,human coronavirus oc43,"Muthuraman, K., Jackman, M.J., Julien, J.P.",2.6,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV3,Kappa,,,,,,9nqz_G_F_B,False
8tqa,H,L,0,A,protein,,"h-2 class i histocompatibility antigen, d-b alpha chain",IMMUNE SYSTEM,03/20/24,Crystal structure of Fab.28.14.8 in complex with MHC-I (H2-Db),Mus musculus; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,mus musculus,"Jiang, J., Boyd, L.F., Natarajan, K., Margulies, D.H.",2.6,X-RAY DIFFRACTION,0.253,0.181,False,True,IGHV1,IGKV10,Kappa,,,,,,8tqa_H_L_A,False
5w06,H,L,0,T,protein,,tissue factor,IMMUNE SYSTEM,05/30/17,HUMAN TISSUE FACTOR IN COMPLEX WITH ANTIBODY M1587,MUS MUSCULUS; HOMO SAPIENS,mus musculus,mus musculus,homo sapiens,"Teplyakov, A., Obmolova, G., Malia, T.J., Gilliland, G.L.",2.6,X-RAY DIFFRACTION,0.235,0.186,False,True,IGHV5,IGKV2,Kappa,1.4000000000000003e-10,-13.443086585131375,SPR,,TBD,5w06_H_L_T,False
7lbg,H,G,0,A,protein,,envelope glycoprotein h,VIRAL PROTEIN/Immune System,01/07/21,CryoEM structure of the HCMV Trimer gHgLgO in complex with human Transforming growth factor beta receptor type 3 and neutralizing fabs 13H11 and MSL-109,HUMAN CYTOMEGALOVIRUS (STRAIN MERLIN); HUMAN CYTOMEGALOVIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,human cytomegalovirus (strain merlin),"Kschonsak, M., Rouge, L., Arthur, C.P., Hoangdung, H., Patel, N., Kim, I., Johnson, M., Kraft, E., Rohou, A.L., Gill, A., Martinez-Martin, N., Payandeh, J., Ciferri, C.",2.6,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV2,Kappa,,,,,,7lbg_H_G_A,False
7yru,H,L,0,A,protein,,activin receptor type-1,TRANSFERASE/IMMUNE SYSTEM,05/17/23,ALK2 antibody complex,Homo sapiens; Rattus norvegicus,rattus norvegicus,rattus norvegicus,homo sapiens,"Kawaguchi, Y., Nakamura, K., Suzuki, M., Tsuji, S., Katagiri, T.",2.6,X-RAY DIFFRACTION,0.271,0.245,False,True,IGHV5,IGKV4,Kappa,,,,,,7yru_H_L_A,False
4g3y,H,L,0,C,protein,,tumor necrosis factor,IMMUNE SYSTEM,07/15/12,Crystal structure of TNF-alpha in complex with Infliximab Fab fragment,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Liang, S.Y., Dai, J.X., Guo, Y.J., Lou, Z.Y.",2.6,X-RAY DIFFRACTION,0.235,0.189,False,True,IGHV6,IGKV5,Kappa,8.7e-09,-10.996463217420198,SPR,,TBD,4g3y_H_L_C,False
4jo3,H,L,0,P,peptide,,gp120,IMMUNE SYSTEM/VIRAL PROTEIN,03/16/13,Crystal structure of rabbit mAb R20 Fab in complex with V3 C-terminus of HIV-1 Consensus B gp120,ORYCTOLAGUS CUNICULUS; HUMAN IMMUNODEFICIENCY VIRUS 1,oryctolagus cuniculus,oryctolagus cuniculus,human immunodeficiency virus 1,"Pan, R.M., Kong, X.P.",2.6,X-RAY DIFFRACTION,0.234,0.184,False,True,IGHV1,IGKV1,Kappa,,,,,,4jo3_H_L_P,False
9dez,I,M,0,A,protein,,spike glycoprotein,VIRAL PROTEIN,11/13/24,PDCoV S trimer bound by three copies of PD41 Fab,Mus musculus; Porcine deltacoronavirus,mus musculus,mus musculus,porcine deltacoronavirus,"Asarnow, D., Rexhepaj, M., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler, D., Center for Structural Genomics of Infectious Diseases (CSGID)",2.6,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGLV2,Lambda,,,,,,9dez_I_M_A,False
8ez7,H,L,0,A,protein,,neuraminidase,Hydrolase/Immune System,11/08/23,Structure of 1F04 Fab in complex with A/Moscow/10/1999 (H3N2) influenza virus neuraminidase,Homo sapiens; Influenza A virus (A/Moscow/10/1999(H3N2)),homo sapiens,homo sapiens,influenza a virus (a/moscow/10/1999(h3n2)),"Mou, Z., Lei, R., Wu, N.C., Dai, X.",2.6,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV3,Kappa,,,,,,8ez7_H_L_A,False
7rah,B,A,0,E,protein,,"bifunctional adenylate cyclase toxin/hemolysin cyaa,bifunctional adenylate cyclase toxin/hemolysin cyaa ",IMMUNE SYSTEM/TOXIN,07/01/21,Adenylate cyclase toxin RTX domain fragment bound to M1H5 Fab and M2B10 Fab,MUS MUSCULUS; BORDETELLA PERTUSSIS,mus musculus,mus musculus,bordetella pertussis,"Goldsmith, J.A., McLellan, J.S.",2.6,X-RAY DIFFRACTION,0.218,0.195,False,True,IGHV5,IGKV10,Kappa,,,,,,7rah_B_A_E,False
7yck,E,F,0,B,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,02/01/23,Crystal structure of SARS-CoV-2 Spike RBD in complex with FP-12A Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Nguyen, V.H.T., Chen, X.",2.6,X-RAY DIFFRACTION,0.264,0.229,False,True,IGHV3,IGLV6,Lambda,,,,,,7yck_E_F_B,False
6o9i,D,E,0,C,protein,,ecd,IMMUNE SYSTEM,03/13/19,Ternary complex of mouse ECD with Fab1 and Fab2,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Min, X., Wang, Z.",2.6,X-RAY DIFFRACTION,0.252,0.196,False,True,IGHV1,IGKV1,Kappa,,,,,,6o9i_D_E_C,False
7uvf,X,Y,0,B,protein,,t-cell surface glycoprotein cd8 alpha chain,IMMUNE SYSTEM,10/12/22,Crystal structure of ZED8 Fab complex with CD8 alpha,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Yu, C., Davies, C., Koerber, J.T., Williams, S.",2.6,X-RAY DIFFRACTION,0.259,0.198,False,True,IGHV14,IGKV16,Kappa,,,,,,7uvf_X_Y_B,False
8dcc,H,L,0,E,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,07/06/22,SARS-CoV-2 Receptor-Binding Domain SPEEDesign Immunogen 3 Bound to P2B-2F6 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Dickey, T.D., Tolia, N.H.",2.6,X-RAY DIFFRACTION,0.272,0.221,False,True,IGHV4,IGLV2,Lambda,,,,,,8dcc_H_L_E,False
8gkl,H,L,0,E,protein,,mucin-16,IMMUNE SYSTEM,03/20/24,Crystal Structure of the Humanized MUC16 Specific Antibody huAR9.6,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Brooks, C.L., Aguilar, E.N.",2.6,X-RAY DIFFRACTION,0.269,0.215,False,True,IGHV5,IGKV3,Kappa,,,,,,8gkl_H_L_E,False
8tv1,D,E,0,C,protein,,ephrin type-a receptor 2,SIGNALING PROTEIN/IMMUNE SYSTEM,06/26/24,Structure of the EphA2 LBDCRD bound to FabS1C_L1,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Singer, A.U., Bruce, H.A., Blazer, L., Adams, J.J., Sicheri, F., Sidhu, S.S.",2.6,X-RAY DIFFRACTION,0.246,0.202,False,True,IGHV3,IGKV1,Kappa,,,,,,8tv1_D_E_C,False
8r8d,H,L,0,A,protein,,coagulation factor xii,BLOOD CLOTTING,12/13/23,Cryo-EM structure of coagulation factor beta-XIIa in complex with the garadacimab Fab fragment (symmetric dimer),Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Drulyte, I.",2.6,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV1,Lambda,,,,,,8r8d_H_L_A,False
8dcn,A,B,0,C,protein,,adp-ribosylating binary toxin binding subunit cdtb,TOXIN/IMMUNE SYSTEM,04/05/23,Crystal structure of Clostridioides difficile binary toxin CDTb D4 fragment in complex with BINTOXB/9 Fab,Clostridioides difficile; Mus musculus,mus musculus,mus musculus,clostridioides difficile,"Goldsmith, J.A., McLellan, J.S.",2.6,X-RAY DIFFRACTION,0.260,0.227,False,True,IGHV1,IGKV8,Kappa,,,,,,8dcn_A_B_C,False
4liq,H,L,0,E,protein,,macrophage colony-stimulating factor 1 receptor,IMMUNE SYSTEM,07/03/13,Structure of the extracellular domain of human CSF-1 receptor in complex with the Fab fragment of RG7155,MUS MUSCULUS; HOMO SAPIENS,mus musculus,mus musculus,homo sapiens,"Benz, J., Gorr, I.H., Hertenberger, H., Ries, C.H.",2.6,X-RAY DIFFRACTION,0.237,0.186,False,True,IGHV1,IGKV1,Kappa,2.0000000000000003e-10,-13.23176250178276,SPR,,TBD,4liq_H_L_E,False
7kqk,H,L,0,P,peptide,,ptau peptide,IMMUNE SYSTEM,11/16/20,anti-pTau C21-ABS Fab in complex with pTau peptide,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,homo sapiens,"Mosyak, L., Brinth, A.",2.6,X-RAY DIFFRACTION,0.231,0.211,False,True,IGHV3,IGLV3,Lambda,,,,,,7kqk_H_L_P,False
1rjl,B,A,0,C,protein,,outer surface protein b,IMMUNE SYSTEM,11/19/03,Structure of the complex between OspB-CT and bactericidal Fab-H6831,BORRELIA BURGDORFERI; MUS MUSCULUS,mus musculus,mus musculus,borrelia burgdorferi,"Becker, M., Bunikis, J., Lade, B.D., Dunn, J.J., Barbour, A.G., Lawson, C.L.",2.6,X-RAY DIFFRACTION,0.235,0.191,False,False,IGHV1,IGKV11,Kappa,,,,,,1rjl_B_A_C,False
8ol9,B,A,0,H,protein,,coagulation factor ix heavy chain,BLOOD CLOTTING,07/19/23,Anti-FIXa Fab in complex with human des-(Gla-EGF1) FIXa,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Johansson, E., Svensson, L.A.",2.6,X-RAY DIFFRACTION,0.323,0.267,False,True,IGHV3,IGKV1,Kappa,,,,,,8ol9_B_A_H,False
7jtg,A,B,0,E,protein,,envelope glycoprotein e2,IMMUNE SYSTEM/VIRAL PROTEIN,08/17/20,Structure of Hepatitis C Virus Envelope Glycoprotein E2 core from genotype 6a bound to broadly neutralizing antibody RM11-43,MACACA MULATTA; RECOMBINANT HEPATITIS C VIRUS HK6A/JFH-1,macaca mulatta,macaca mulatta,recombinant hepatitis c virus hk6a/jfh-1,"Tzarum, N., Wilson, I.A., Law, M.",2.6,X-RAY DIFFRACTION,0.269,0.222,False,True,IGHV1,IGKV1,Kappa,,,,,,7jtg_A_B_E,False
7kqg,B,C,0,A,protein,,hemagglutinin,IMMUNE SYSTEM/VIRAL PROTEIN,11/16/20,Antibodies that engage the hemagglutinin receptor-binding site of influenza B viruses,INFLUENZA B VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,influenza b virus,"Bajic, G., Harrison, S.C.",2.6,X-RAY DIFFRACTION,0.280,0.232,False,True,IGHV3,IGKV1,Kappa,,,,,,7kqg_B_C_A,False
9c1s,H,L,0,D,protein,,outer surface protein c,IMMUNE SYSTEM/ANTIGEN,08/27/25,Fab F946 in complex with OspC type A,Borreliella burgdorferi; Homo sapiens,homo sapiens,homo sapiens,borreliella burgdorferi,"Rudolph, M.J., Mantis, N.",2.6,X-RAY DIFFRACTION,0.251,0.196,False,True,IGHV4,IGKV1,Kappa,,,,,,9c1s_H_L_D,False
6whk,C,B,0,A,protein,,hemagglutinin ha1 chain,VIRAL PROTEIN/Immune System,04/08/20,Minimally mutated anti-influenza broadly neutralizing antibody,INFLUENZA A VIRUS (A/BEIJING/262/1995(H1N1)); HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus (a/beijing/262/1995(h1n1)),"Bajic, G., Schmidt, A.G.",2.6,X-RAY DIFFRACTION,0.268,0.218,False,True,IGHV3,IGLV1,Lambda,,,,,,6whk_C_B_A,False
6fy3,H,L,0,P,peptide,,cap45 v2 peptide,IMMUNE SYSTEM,03/10/18,"Crystal structure of a V2-directed, RV144 vaccine-like antibody from HIV-1 infection, CAP228-3D, bound to a heterologous V2 peptide",HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Wibmer, C.K., Moore, P.L., Morris, L.",2.6,X-RAY DIFFRACTION,0.250,0.220,False,True,IGHV5,IGLV6,Lambda,,,,,,6fy3_H_L_P,False
5zia,G,L,0,R,peptide,,phosphorylated tau peptide,IMMUNE SYSTEM,03/14/18,Crystal structure of human anti-tau antibody CBTAU-24.1 in complex with its phosphorylated tau peptide,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,homo sapiens,"Zhang, H., Wilson, I.A.",2.603,X-RAY DIFFRACTION,0.249,0.200,False,True,IGHV1,IGKV4,Kappa,3e-07,-8.898798774188476,Unknown,,TBD,5zia_G_L_R,False
4y5v,G,H,0,I,protein,,erythropoietin receptor,protein binding/immune system,02/12/15,Diabody 305 complex with EpoR,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Moraga, I., Guo, F., Ozkan, E., Jude, K.M., Garcia, K.C.",2.604,X-RAY DIFFRACTION,0.229,0.187,False,True,IGHV3,IGLV2,Lambda,,,,,,4y5v_G_H_I,False
1yy9,D,C,0,A,protein,,epidermal growth factor receptor,IMMUNE SYSTEM/Transferase,02/24/05,Structure of the extracellular domain of the epidermal growth factor receptor in complex with the Fab fragment of cetuximab/Erbitux/IMC-C225,"HOMO SAPIENS; MUS MUSCULUS, HOMO SAPIENS","mus musculus, homo sapiens","mus musculus, homo sapiens",homo sapiens,"Li, S., Schmitz, K.R., Jeffrey, P.D., Wiltzius, J.J.W., Kussie, P., Ferguson, K.M.",2.605,X-RAY DIFFRACTION,0.289,0.239,False,True,IGHV2,IGKV5,Kappa,2.3e-09,-11.78,SPR,25.0,15837620,1yy9_D_C_A,True
5lsp,S,T,0,P,protein,,hepatocyte growth factor receptor,TRANSFERASE,09/05/16,107_A07 Fab in complex with fragment of the Met receptor,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"DiCara, D., Chirgadze, D.Y., Pope, A., Karatt-Vellatt, A., Winter, A., van den Heuvel, J., Gherardi, E., McCafferty, J.",2.605,X-RAY DIFFRACTION,0.257,0.215,False,True,IGHV1,IGKV1,Kappa,,,,,,5lsp_S_T_P,False
9b7g,H,L,0,A,protein,,hemagglutinin,VIRAL PROTEIN,05/07/25,Cryo-EM structure of antibody TJ5-13 bound to H3 COBRA NG2 hemagglutinin,Homo sapiens; Influenza A virus,homo sapiens,homo sapiens,influenza a virus,"Dzimianski, J.V., Cruz, J.M., Serrao, V.H.B., DuBois, R.M.",2.61,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV1,Lambda,,,,,,9b7g_H_L_A,False
2nyy,D,C,0,A,protein,,botulinum neurotoxin type a,TOXIN/IMMUNE SYSTEM,11/21/06,Crystal structure of botulinum neurotoxin type A complexed with monoclonal antibody CR1,HOMO SAPIENS; CLOSTRIDIUM BOTULINUM,,,clostridium botulinum,"Stevens, R.C., Arndt, J.W.",2.61,X-RAY DIFFRACTION,0.246,0.206,False,False,IGHV5,IGKV3,Kappa,2.48e-12,-15.72,Other,23.0,17173035,2nyy_D_C_A,True
9bof,E,C,0,B,protein,,capsid protein vp1,VIRAL PROTEIN/IMMUNE SYSTEM,04/09/25,16E10 Fab bound to norovirus GI.1 P domain,Homo sapiens; Norovirus,homo sapiens,homo sapiens,norovirus,"Olia, A.S., Morano, N.C., Shapiro, L., Kwong, P.D.",2.61,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV2,Kappa,,,,,,9bof_E_C_B,False
4dkf,H,L,0,A,protein,,interleukin-34,CYTOKINE/IMMUNE SYSTEM,02/03/12,Crystal Structure of Human Interleukin-34 Bound to FAb2,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Ma, X., Chen, Y., Stawicki, S., Wu, Y., Bazan, J.F., Starovasnik, M.A.",2.61,X-RAY DIFFRACTION,0.256,0.225,False,True,IGHV3,IGKV1,Kappa,3.1e-09,-11.607859518116271,SPR,,TBD,4dkf_H_L_A,False
7bep,A,B,0,E,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,12/24/20,Crystal structure of the receptor binding domain of SARS-CoV-2 Spike glycoprotein in a ternary complex with COVOX-384 and S309 Fabs,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, D., Zhao, Y., Ren, J., Stuart, D.",2.61,X-RAY DIFFRACTION,0.241,0.203,False,True,IGHV3,IGKV1,Kappa,,,,,,7bep_A_B_E,False
3bky,H,L,0,P,peptide,,b-lymphocyte antigen cd20,IMMUNE SYSTEM,12/07/07,Crystal Structure of Chimeric Antibody C2H7 Fab in complex with a CD20 Peptide,"HOMO SAPIENS, MUS MUSCULUS; SYNTHETIC CONSTRUCT","homo sapiens, mus musculus","homo sapiens, mus musculus",,"Du, J., Zhong, C., Ding, J.",2.61,X-RAY DIFFRACTION,0.301,0.234,False,True,IGHV1,IGKV4,Kappa,4.35e-07,-8.67,SPR,,18346788,3bky_H_L_P,False
8vqd,C,B,0,A,protein,,receptor tyrosine-protein kinase erbb-2/higg1 fc domainfusion ,SIGNALING PROTEIN,10/09/24,HER2 S310F in complex with TL1 Fab,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Bang, I., Koide, S.",2.61,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8vqd_C_B_A,False
2hfg,H,L,0,R,peptide,,tumor necrosis factor receptor superfamily member 13c,IMMUNE SYSTEM,06/23/06,Crystal structure of hBR3 bound to CB3s-Fab,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Hymowitz, S.G.",2.61,X-RAY DIFFRACTION,0.252,0.195,False,True,IGHV3,IGKV1,Kappa,6e-10,-12.57,SPR,25.0,16840730,2hfg_H_L_R,False
6nmv,H,L,0,S,protein,,tyrosine-protein phosphatase non-receptor type substrate 1,IMMUNE SYSTEM,01/11/19,Non-Blocking Fab 218 anti-SIRP-alpha antibody in complex with SIRP-alpha Variant 1,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Wibowo, A.S., Carter, J.J., Sim, J.",2.61,X-RAY DIFFRACTION,0.301,0.195,False,True,IGHV3,unknown,unknown,,,,,,6nmv_H_L_S,False
4hwb,H,L,0,A,protein,,interleukin-13 receptor subunit alpha-1,IMMUNE SYSTEM,11/07/12,Crystal structure of ectodomain 3 of the IL-13 receptor alpha 1 in complex with a human neutralizing monoclonal antibody fragment,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Xu, Y.",2.61,X-RAY DIFFRACTION,0.224,0.197,False,True,IGHV5,IGKV3,Kappa,5.7e-10,-12.611243089917515,Unknown,,TBD,4hwb_H_L_A,False
8vvk,D,C,0,B,protein,,gp38,VIRAL PROTEIN/IMMUNE SYSTEM,07/17/24,CCHFV GP38 bound to ADI-46143 Fab,Crimean-Congo hemorrhagic fever virus; Homo sapiens,homo sapiens,homo sapiens,crimean-congo hemorrhagic fever virus,"Hjorth, C.K., McLellan, J.S.",2.61,X-RAY DIFFRACTION,0.217,0.177,False,True,IGHV4,IGLV3,Lambda,,,,,,8vvk_D_C_B,False
9lp0,D,E,0,C,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,01/28/26,Cryo-EM structure of SARS-CoV-2 KP.3.1.1 spike glycoprotein in complex with F61R2-780 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Wang, X., Li, X.",2.61,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV3,Kappa,,,,,,9lp0_D_E_C,False
8xsj,H,L,0,B,protein,,spike protein s1,VIRAL PROTEIN/HYDROLASE/IMMUNE SYSTEM,07/17/24,SARS-CoV-2 Omicron BA.4 RBD + IMCAS-316 + ACE2,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Tong, Z., Cui, Y., Xie, Y., Tong, J., Gao, G.F., Qi, J.",2.61,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8xsj_H_L_B,False
4xzu,E,F,0,G,protein,,coagulation factor viii,IMMUNE SYSTEM,02/05/15,Crystal Structure of the Human Factor VIII C2 Domain in Complex with Murine 3E6 Inhibitory Antibody,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Spiegel, P.C., Wuerth, M.E.",2.61,X-RAY DIFFRACTION,0.267,0.199,False,False,IGHV9,IGKV4,Kappa,,,,,,4xzu_E_F_G,False
6wo5,A,B,0,E,protein,,envelope glycoprotein e2,IMMUNE SYSTEM/Viral Protein,04/24/20,Structure of Hepatitis C Virus Envelope Glycoprotein E2 core from genotype 1a bound to neutralizing antibody 212.1.1 and non neutralizing antibody E1,HOMO SAPIENS; HEPATITIS C VIRUS (ISOLATE H),homo sapiens,homo sapiens,hepatitis c virus (isolate h),"Tzarum, N., Wilson, I.A., Law, M.",2.619,X-RAY DIFFRACTION,0.250,0.203,False,True,IGHV1,IGKV2,Kappa,,,,,,6wo5_A_B_E,False
6wo5,H,L,0,E,protein,,envelope glycoprotein e2,IMMUNE SYSTEM/Viral Protein,04/24/20,Structure of Hepatitis C Virus Envelope Glycoprotein E2 core from genotype 1a bound to neutralizing antibody 212.1.1 and non neutralizing antibody E1,HOMO SAPIENS; HEPATITIS C VIRUS (ISOLATE H),homo sapiens,homo sapiens,hepatitis c virus (isolate h),"Tzarum, N., Wilson, I.A., Law, M.",2.619,X-RAY DIFFRACTION,0.250,0.203,False,True,IGHV1,IGKV1,Kappa,,,,,,6wo5_H_L_E,False
8fgx,B,A,0,C,protein,,plasma kallikrein light chain,HYDROLASE/IMMUNE SYSTEM,09/06/23,Cryo-EM structure of the STAR-0215 Fab in complex with active human plasma kallikrein,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Fuller, J.R., Biris, N., Bista, P.",2.62,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,8fgx_B_A_C,False
4d3c,H,L,0,A,protein,,hepatocyte growth factor,,10/21/14,Crystal structure of the NK1 domain of HGF in complex with anti-HGF  monoclonal antibody SFN68.,HOMO SAPIENS; ORYCTOLAGUS CUNICULUS,oryctolagus cuniculus,oryctolagus cuniculus,homo sapiens,"Kang, Y.J., Kim, K.L., Cho, H.S., Chung, J.H.",2.62,X-RAY DIFFRACTION,0.29758,0.26760,False,False,IGHV1,IGKV1,Kappa,,,,,,4d3c_H_L_A,False
8jqs,H,L,0,A,protein,,non-structural protein 1,VIRAL PROTEIN/IMMUNE SYSTEM,12/04/24,CryoEM structure of sNS1 complexed with Fab 14G5,Homo sapiens; Zika virus,homo sapiens,homo sapiens,zika virus,"Chen, Q., Pan, Q.",2.63,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGLV3,Lambda,,,,,,8jqs_H_L_A,False
6mto,H,L,0,T,protein,,vrc42 epitope t117-f scaffold,IMMUNE SYSTEM,10/21/18,Crystal structure of VRC42.01 Fab in complex with T117-F MPER scaffold,HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Kwon, Y.D., Druz, A., Law, W.H., Peng, D., Zhang, B., Doria-Rose, N.A., Kwong, P.D.",2.634,X-RAY DIFFRACTION,0.269,0.221,False,True,IGHV1,IGKV3,Kappa,,,,,,6mto_H_L_T,False
4ers,H,L,0,A,protein,,glucagon receptor,IMMUNE SYSTEM,04/20/12,A Molecular Basis for Negative Regulation of the Glucagon Receptor,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Murray, J.M., Koth, C.M., Mukund, S.",2.637,X-RAY DIFFRACTION,0.279,0.231,False,True,IGHV3,IGKV1,Kappa,,,,,,4ers_H_L_A,False
9jij,H,L,0,A,protein,,secreted protein orf2,VIRAL PROTEIN/IMMUNE SYSTEM,07/23/25,Hepatitis E virus capsid protein E2s domain (genotype I) in complex with Fab C158,Hepatitis E virus genotype 1 (isolate Human/Burma); Homo sapiens,homo sapiens,homo sapiens,hepatitis e virus genotype 1 (isolatehuman/burma) ,"Liu, L., Zheng, Q., Li, S.",2.64,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV1,Lambda,,,,,,9jij_H_L_A,False
4leo,A,B,0,C,protein,,receptor tyrosine-protein kinase erbb-3,Transferase/Immune System,06/26/13,Crystal structure of anti-HER3 Fab RG7116 in complex with the extracellular domains of human Her3 (ERBB3),MUS MUSCULUS; HOMO SAPIENS,mus musculus,mus musculus,homo sapiens,"Schiller C.B., Hopfner K.P.",2.64,X-RAY DIFFRACTION,0.258,0.228,False,True,IGHV1,IGKV4,Kappa,5e-10,-12.68887519701207,SPR,,TBD,4leo_A_B_C,False
5eu7,E,C,0,A,protein,,integrase,VIRAL PROTEIN,11/18/15,Crystal structure of HIV-1 integrase catalytic core in complex with Fab,HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Galilee, M., Griner, S.L., Stroud, R.M., Alian, A.",2.64,X-RAY DIFFRACTION,0.233,0.181,False,True,IGHV3,IGKV1,Kappa,,,,,,5eu7_E_C_A,False
8jkh,h,l,0,a,protein,,unknown,VIRAL PROTEIN/IMMUNE SYSTEM,12/04/24,CryoEM structure of sNS1 complexed with Fab 4B8,Homo sapiens; Zika virus,homo sapiens,homo sapiens,zika virus,"Chen, Q., Pan, Q.",2.64,ELECTRON MICROSCOPY,,,False,False,IGHV3,IGKV1,Kappa,,,,,,8jkh_h_l_a,False
5h35,A,B,0,C,protein,,membrane protein tric,IMMUNE SYSTEM/MEMBRANE PROTEIN,10/20/16,Crystal structures of the TRIC trimeric intracellular cation channel orthologue from Sulfolobus solfataricus,SULFOLOBUS SOLFATARICUS; MUS MUSCULUS,mus musculus,mus musculus,sulfolobus solfataricus,"Kasuya, G., Hiraizumi, M., Hattori, M., Nureki, O.",2.642,X-RAY DIFFRACTION,0.252,0.211,False,True,IGHV5,IGKV1,Kappa,,,,,,5h35_A_B_C,False
8cz5,H,L,0,A,protein,,n11 p domain,VIRAL PROTEIN/Immune System,10/19/22,N11 P domain 2D9 Fab P complex,Lagovirus; Mus musculus,mus musculus,mus musculus,lagovirus,"Leuthold, M., Kilic, T., Hansman, G.",2.645,X-RAY DIFFRACTION,0.223,0.194,False,False,IGHV9,IGKV12,Kappa,,,,,,8cz5_H_L_A,False
3lh2,H,L,0,S,protein,,4e10_1vi7a_s0_002_n (t88),IMMUNE SYSTEM,01/21/10,Crystal structure of HIV epitope-scaffold 4E10_1VI7A_S0_002_N 4E10 Fv complex,ARTIFICIAL GENE; HOMO SAPIENS,homo sapiens,homo sapiens,artificial gene,"Holmes, M.A.",2.65,X-RAY DIFFRACTION,0.270,0.222,False,True,IGHV1,IGKV3,Kappa,5.6e-09,-11.25,SPR,,20826338,3lh2_H_L_S,False
9dpc,H,L,0,D,protein,,neuraminidase,IMMUNE SYSTEM,03/19/25,Structure of Fab 297 in complex with influenza H1N1 A/Victoria/4897/2022 neuraminidase,Homo sapiens; Influenza A virus,homo sapiens,homo sapiens,influenza a virus,"Pholcharee, T., Wu, N.C.",2.65,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,9dpc_H_L_D,False
7m7w,H,L,0,R,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,03/29/21,Antibodies to the SARS-CoV-2 receptor-binding domain that maximize breadth and resistance to viral escape,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Snell, G., Czudnochowski, N., Croll, T.I., Nix, J.C., Corti, D., Cameroni, E., Pinto, D., Beltramello, M.",2.65,X-RAY DIFFRACTION,0.271,0.221,False,True,IGHV1,IGLV1,Lambda,,,,,,7m7w_H_L_R,False
6h2y,H,L,0,D,protein,,lipoprotein gna1870,IMMUNE SYSTEM,07/17/18,human Fab 1E6 bound to fHbp variant 3 from Neisseria meningitidis serogroup B,NEISSERIA MENINGITIDIS; HOMO SAPIENS,homo sapiens,homo sapiens,neisseria meningitidis,"Veggi, D., Bianchi, F., Cozzi, R., Malito, E., Bottomley, M.J.",2.65,X-RAY DIFFRACTION,0.275,0.205,False,True,IGHV1,IGLV3,Lambda,,,,,,6h2y_H_L_D,False
6urm,H,L,0,F,protein,,hemagglutinin,IMMUNE SYSTEM/VIRAL PROTEIN,10/23/19,Crystal structure of vaccine-elicited receptor-binding site targeting antibody LPAF-a.01 in complex with Hemagglutinin H1 A/California/04/2009,INFLUENZA A VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus,"Zhou, T., Cheung, S.F., Kwong, P.D.",2.65,X-RAY DIFFRACTION,0.262,0.215,False,True,IGHV2,IGLV3,Lambda,,,,,,6urm_H_L_F,False
6vel,H,L,0,C,protein,,"ubiquitin-like protein, smt3,cadherin-1 chimera",CELL ADHESION/Immune System,01/02/20,Crystal Structure of Human E-cadherin bound by mouse monoclonal antibody 66E8Fab,MUS MUSCULUS; SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / S288C); HOMO SAPIENS,mus musculus,mus musculus,"saccharomyces cerevisiae (strain atcc 204508 /s288c), homo sapiens ","Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)",2.65,X-RAY DIFFRACTION,0.233,0.183,False,True,IGHV1,IGKV16,Kappa,,,,,,6vel_H_L_C,False
7o30,H,L,0,P,peptide,,pas#1 epitope peptide,IMMUNE SYSTEM,04/01/21,Crystal structure of the anti-PAS Fab 1.1 in complex with its epitope peptide,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,synthetic construct,"Schilz, J., Schiefner, A., Skerra, A.",2.65,X-RAY DIFFRACTION,0.269,0.220,False,True,IGHV2,IGKV3,Kappa,,,,,,7o30_H_L_P,False
8djg,C,D,0,E,protein,,isoform 2 of adhesion g protein-coupled receptor l3,SIGNALING PROTEIN/Immune System,02/15/23,ADGRL3-lectin domain in complex with an activating synthetic antibody fragment,Homo sapiens; synthetic construct,synthetic construct,synthetic construct,homo sapiens,"Kordon, S.P., Bandekar, S.J., Arac, D.",2.65,X-RAY DIFFRACTION,0.274,0.237,False,True,IGHV3,IGKV1,Kappa,,,,,,8djg_C_D_E,False
7jx3,C,D,0,R,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,08/26/20,Mapping neutralizing and immunodominant sites on the SARS-CoV-2 spike receptor-binding domain by structure-guided high-resolution serology,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Snell, G., Czudnochowski, N., Rosen, L.E., Nix, J.C., Corti, D., Veesler, D., Park, Y.J., Walls, A.C., Tortorici, M.A., Cameroni, E., Pinto, D., Beltramello, M.",2.65,X-RAY DIFFRACTION,0.288,0.258,False,True,IGHV3,IGLV6,Lambda,,,,,,7jx3_C_D_R,False
9cci,B,C,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,03/12/25,Dissecting human monoclonal antibody responses from mRNA and protein-based booster vaccinations against XBB1.5 SARS-CoV-2,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Bajic, G., Jaiswal, D.",2.65,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGKV1,Kappa,,,,,,9cci_B_C_A,False
4f3f,B,A,0,C,protein,,mesothelin,IMMUNE SYSTEM,05/09/12,Crystal Structure of Msln7-64 MORAb-009 FAB complex,HOMO SAPIENS; ESCHERICHIA COLI,,,homo sapiens,"Xia, D., Pastan, I., Ma, J., Tang, W.K., Esser, L.",2.65,X-RAY DIFFRACTION,0.222,0.177,False,True,IGHV1,IGKV4,Kappa,7.2e-10,-12.472830103186848,SPR,,TBD,4f3f_B_A_C,False
7a3t,H,L,0,A,protein,,core protein,VIRAL PROTEIN,08/18/20,Crystal structure of dengue 3 virus envelope glycoprotein in complex with the Fab fragment of the broadly neutralizing human antibody EDE1 C8,DENGUE VIRUS 3; HOMO SAPIENS,homo sapiens,homo sapiens,dengue virus 3,"Sharma, A., Vaney, M.C., Guardado-Calvo, P., Duquerroy, S., Rouvinski, A., Rey, F.A.",2.65,X-RAY DIFFRACTION,0.254,0.207,False,True,IGHV3,IGKV3,Kappa,,,,,,7a3t_H_L_A,False
7x8q,F,E,0,D,protein,,frizzled-10,SIGNALING PROTEIN,01/18/23,Frizzled-10 CRD in complex with F10_A9 Fab,Homo sapiens; synthetic construct,synthetic construct,synthetic construct,homo sapiens,"Ge, Q., Wang, Q.",2.65,X-RAY DIFFRACTION,0.247,0.205,False,True,IGHV3,IGKV1,Kappa,,,,,,7x8q_F_E_D,False
6bpc,B,C,0,A,protein,,"reticulocyte binding protein 2, putative",CELL INVASION,11/22/17,Plasmodium vivax reticulocyte binding protein 2b (PvRBP2b) bound to monoclonal antibody 4F7,PLASMODIUM VIVAX (STRAIN SALVADOR I); MUS MUSCULUS,mus musculus,mus musculus,plasmodium vivax (strain salvador i),"Gruszczyk, J., Chan, L.J., Tham, W.H.",2.66,X-RAY DIFFRACTION,0.215,0.197,False,False,IGHV5,IGKV6,Kappa,,,,,,6bpc_B_C_A,False
8gs9,H,K,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,05/03/23,SARS-CoV-2 BA.2 spike RBD in complex bound with VacBB-551,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Liu, C.C., Ju, B., Shen, S.L., Zhang, Z.",2.66,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8gs9_H_K_A,False
5x8m,B,C,0,A,protein,,programmed cell death 1 ligand 1,IMMUNE SYSTEM,03/03/17,PD-L1 in complex with durvalumab,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Heo, Y.S., Lee, H.T.",2.661,X-RAY DIFFRACTION,0.219,0.181,False,True,IGHV3,IGKV3,Kappa,,,,,,5x8m_B_C_A,False
9sgh,A,B,0,I,protein,,interleukin-17a,CYTOKINE,10/29/25,Bimekizumab Fab in complex with human interleukin-17A,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Rondeau, J.-M., Lehmann, S.",2.661,X-RAY DIFFRACTION,0.253,0.221,False,True,IGHV3,IGKV1,Kappa,,,,,,9sgh_A_B_I,False
9k6y,H,L,0,R,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,10/29/25,Cryo-EM structure of SARS-CoV-2 prototype spike protein in complex with H4 Fab (local refinement),Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhang, G., Li, L.J., Wu, Y., Gao, G.F.",2.67,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV2,Kappa,,,,,,9k6y_H_L_R,False
7rnj,H,L,0,B,peptide,,spike glycoprotein stem helix peptide,"ANTIVIRAL PROTEIN, IMMUNE SYSTEM",07/29/21,S2P6 Fab fragment bound to the SARS-CoV/SARS-CoV-2 spike stem helix peptide,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Snell, G., Czudnochowski, N., Croll, T.I., Nix, J.C., Corti, D., Cameroni, E., Pinto, D., Beltramello, M., Sauer, M.M., Veesler, D.",2.67,X-RAY DIFFRACTION,0.274,0.235,False,True,IGHV1,IGKV3,Kappa,,,,,,7rnj_H_L_B,False
9osx,B,C,0,A,protein,,pfcyrpa-em,IMMUNE SYSTEM,12/24/25,PfCyRPA-EM epitope mimic bound to monoclonal antibody Cy.004,Gallus gallus; synthetic construct,gallus gallus,gallus gallus,synthetic construct,"Alam, N., Higgins, M.K.",2.67,X-RAY DIFFRACTION,0.292,0.254,False,True,unknown,unknown,unknown,,,,,,9osx_B_C_A,False
8sj4,H,L,0,A,protein,,conglutin,IMMUNE SYSTEM,12/25/24,8F3-1H9-Ara h 6,Arachis hypogaea; Homo sapiens,homo sapiens,homo sapiens,arachis hypogaea,"Spiller, B.W., Shrem, R.A.",2.67,X-RAY DIFFRACTION,0.232,0.190,False,True,IGHV7,IGKV1,Kappa,,,,,,8sj4_H_L_A,False
8sj4,F,D,0,A,protein,,conglutin,IMMUNE SYSTEM,12/25/24,8F3-1H9-Ara h 6,Arachis hypogaea; Homo sapiens,homo sapiens,homo sapiens,arachis hypogaea,"Spiller, B.W., Shrem, R.A.",2.67,X-RAY DIFFRACTION,0.232,0.190,False,True,IGHV4,IGKV3,Kappa,,,,,,8sj4_F_D_A,False
7chf,A,B,0,R,protein,,sars-cov-2 receptor binding domain,ANTIVIRAL PROTEIN/IMMUNE SYSTEM,07/05/20,Crystal structure of the SARS-CoV-2 RBD in complex with BD-604 Fab and BD-368-2 Fab,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Xiao, J., Zhu, Q.",2.674,X-RAY DIFFRACTION,0.270,0.220,False,True,IGHV3,IGKV2,Kappa,,,,,,7chf_A_B_R,False
8vdl,H,L,0,C,protein,,hb3var03 cidra1.4 domain,IMMUNE SYSTEM,10/09/24,HB3VAR03 CIDRa1.4 domain with C7 Fab,Homo sapiens; Plasmodium falciparum HB3,homo sapiens,homo sapiens,plasmodium falciparum hb3,"Hurlburt, N.K., Pancera, M.",2.68,X-RAY DIFFRACTION,0.266,0.217,False,True,IGHV3,IGLV3,Lambda,,,,,,8vdl_H_L_C,False
7rm3,C,D,0,P,peptide,,peptide from circumsporozoite protein variant vk247,ANTIMICROBIAL PROTEIN,07/26/21,Antibody 2E10.E9 in complex with P. vivax CSP peptide ANGAGNQPGANGAGNQPGANGAGGQAA,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,plasmodium vivax,"Kucharska, I., Ivanochko, D., Julien, J.P.",2.68,X-RAY DIFFRACTION,0.239,0.207,False,True,IGHV9,IGKV8,Kappa,,,,,,7rm3_C_D_P,False
8y31,B,A,0,E,protein,,interferon alpha/beta receptor 1,IMMUNE SYSTEM,12/04/24,The crystal structure of the QX006N-Fab/IFNAR1-SD123 complex,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Li, W., Feng, W.",2.68,X-RAY DIFFRACTION,0.239,0.194,False,True,IGHV3,IGKV1,Kappa,,,,,,8y31_B_A_E,False
8sja,H,L,0,G,protein,,conglutin,IMMUNE SYSTEM,12/25/24,Ara H 6 13D9 16A8,Arachis hypogaea; Homo sapiens,homo sapiens,homo sapiens,arachis hypogaea,"Spiller, B.W., Shrem, R.A.",2.68,X-RAY DIFFRACTION,0.239,0.194,False,True,IGHV1,IGLV3,Lambda,,,,,,8sja_H_L_G,False
9c6y,A,B,0,E,protein,,spike protein s2',VIRAL PROTEIN/IMMUNE SYSTEM,10/08/25,Crystal structure of SARS-CoV-2 XBB.1.5 RBD bound to COV2-3906 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus,"Buchman, C.D., Crowe, J.E.",2.68,X-RAY DIFFRACTION,0.242,0.207,False,True,IGHV4,IGLV6,Lambda,,,,,,9c6y_A_B_E,False
8sja,D,C,0,G,protein,,conglutin,IMMUNE SYSTEM,12/25/24,Ara H 6 13D9 16A8,Arachis hypogaea; Homo sapiens,homo sapiens,homo sapiens,arachis hypogaea,"Spiller, B.W., Shrem, R.A.",2.68,X-RAY DIFFRACTION,0.239,0.194,False,True,IGHV3,IGLV3,Lambda,,,,,,8sja_D_C_G,False
9ekf,H,L,0,A,protein,,hemagglutinin,VIRAL PROTEIN,12/18/24,CryoEM structure of H5N1 A/Texas/37/2024 HA bound to Fab 65C6 and an auto glycan occupying the receptor-binding site,Homo sapiens; Influenza A virus,homo sapiens,homo sapiens,influenza a virus,"Morano, N.C., Shapiro, L., Kwong, P.D.",2.68,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGKV3,Kappa,,,,,,9ekf_H_L_A,False
8c0y,B,D,0,A,protein,,spike protein s2',VIRAL PROTEIN,06/19/24,SARS-CoV2 Omicron BA.1 RBD in complex with CAB-A17 antibody,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Das, H., Hallberg, B.M.",2.68,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV3,Kappa,,,,,,8c0y_B_D_A,False
9o3d,A,B,0,D,protein,,envelope glycoprotein e2,IMMUNE SYSTEM,01/21/26,Crystal structure of broadly neutralizing antibody HEPC108 in complex with Hepatitis C virus envelope glycoprotein E2 ectodomain,Hepatitis C virus subtype 1b; Homo sapiens,homo sapiens,homo sapiens,hepatitis c virus subtype 1b,"Flyak, A.I., Wilcox, X.E.",2.68,X-RAY DIFFRACTION,0.269,0.214,False,True,IGHV1,IGKV1,Kappa,,,,,,9o3d_A_B_D,False
4rgm,H,L,0,S,protein,,enterotoxin type b,TOXIN/IMMUNE SYSTEM,09/30/14,Structure of Staphylococcal Enterotoxin B bound to the neutralizing antibody 20B1,STAPHYLOCOCCUS AUREUS; MUS MUSCULUS,mus musculus,mus musculus,staphylococcus aureus,"Franklin, M.C., Dutta, K., Varshney, A.K., Goger, M.J., Fries, B.C.",2.689,X-RAY DIFFRACTION,0.277,0.225,False,False,IGHV9,IGKV9,Kappa,2.29e-08,-10.423049285339754,BLI,,TBD,4rgm_H_L_S,False
7t01,H,L,0,A,protein,,spike protein s1,VIRAL PROTEIN,11/29/21,SARS-CoV-2 S-RBD + Fab 54042-4,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Johnson, N.V., Mclellan, J.S.",2.69,ELECTRON MICROSCOPY,,,False,True,IGHV2,IGKV1,Kappa,,,,,,7t01_H_L_A,False
7wpe,U,V,0,A,protein,,spike glycoprotein,VIRAL PROTEIN,01/23/22,SARS-CoV-2 Omicron Variant S Trimer complexed with two JMB2002 Fab,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; MUS MUSCULUS; LAMA GLAMA,mus musculus,mus musculus,severe acute respiratory syndrome coronavirus2 ,"Yin, W., Xu, Y., Xu, P., Cao, X., Wu, C., Gu, C., He, X., Wang, X., Huang, S., Yuan, Q., Wu, K., Hu, W., Huang, Z., Liu, J., Wang, Z., Jia, F., Xia, K., Liu, P., Wang, X., Song, B., Zheng, J., Jiang, H., Cheng, X., Jiang, Y., Deng, S.J., Xu, H.E.",2.69,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,7wpe_U_V_A,False
4nnp,X,Y,0,B,protein,,lipoprotein,TRANSPORT PROTEIN/IMMUNE SYSTEM,11/18/13,Crystal Structure of Apo Manganese ABC transporter MntC from Staphylococcus aureus bound to an antagonistic fab fragment,HOMO SAPIENS; STAPHYLOCOCCUS AUREUS SUBSP. AUREUS,homo sapiens,homo sapiens,staphylococcus aureus subsp. aureus,"Rouge, L., Sudhamsu, J.",2.69,X-RAY DIFFRACTION,0.283,0.224,False,True,IGHV3,IGKV1,Kappa,,,,,,4nnp_X_Y_B,False
8tq8,H,L,0,A,protein,,"h-2 class i histocompatibility antigen, d-d alpha chain",IMMUNE SYSTEM,03/20/24,Crystal structure of Fab.34.5.8 in complex with MHC-I (H2-Dd),Mus musculus; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,mus musculus,"Jiang, J., Boyd, L.F., Natarajan, K., Margulies, D.H.",2.69,X-RAY DIFFRACTION,0.243,0.201,False,True,IGHV1,IGKV3,Kappa,,,,,,8tq8_H_L_A,False
4rgn,D,E,0,A,protein,,enterotoxin type b,TOXIN/IMMUNE SYSTEM,09/30/14,"Structure of Staphylococcal Enterotoxin B bound to two neutralizing antibodies, 14G8 and 6D3",STAPHYLOCOCCUS AUREUS; MUS MUSCULUS,mus musculus,mus musculus,staphylococcus aureus,"Franklin, M.C., Dutta, K., Varshney, A.K., Goger, M.J., Fries, B.C.",2.698,X-RAY DIFFRACTION,0.278,0.240,False,False,IGHV1,IGKV8,Kappa,,,,,,4rgn_D_E_A,False
3q3g,H,F,0,I,protein,,integrin alpha-m,IMMUNE SYSTEM/CELL ADHESION,12/21/10,Crystal Structure of A-domain in complex with antibody,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Mahalingam, B., Xiong, J.P., Arnaout, M.A.",2.7,X-RAY DIFFRACTION,0.244,0.211,False,False,IGHV14,IGKV8,Kappa,4.97e-09,-11.32,SPR,25.0,22095715,3q3g_H_F_I,False
3ks0,H,L,0,B,protein,,"cytochrome b2, mitochondrial",OXIDOREDUCTASE,11/20/09,Crystal structure of the heme domain of flavocytochrome b2 in complex with Fab B2B4,SACCHAROMYCES CEREVISIAE; MUS MUSCULUS,mus musculus,mus musculus,saccharomyces cerevisiae,"Golinelli-Pimpaneau, B., Lederer, F., Le, K.H.D.",2.7,X-RAY DIFFRACTION,0.289,0.214,False,False,IGHV3,IGLV1,Lambda,,,,,,3ks0_H_L_B,False
6e62,B,C,0,A,protein,,pf48/45,IMMUNE SYSTEM,07/23/18,Crystal structure of malaria transmission-blocking antigen Pfs48/45 6C in complex with antibody 85RF45.1,PLASMODIUM FALCIPARUM; RATTUS NORVEGICUS,rattus norvegicus,rattus norvegicus,plasmodium falciparum,"Kundu, P., Semesi, A., Julien, J.P.",2.7,X-RAY DIFFRACTION,0.276,0.246,False,True,IGHV5,IGLV3,Lambda,3.2e-09,-11.589048932503635,SPR,,TBD,6e62_B_C_A,False
2or9,H,L,0,P,peptide,,synthetic epitope peptide of 9e10,IMMUNE SYSTEM,02/02/07,The structure of the anti-c-myc antibody 9E10 Fab fragment/epitope peptide complex reveals a novel binding mode dominated by the heavy chain hypervariable loops,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,,"Krauss, N., Scheerer, P., Hoehne, W.",2.7,X-RAY DIFFRACTION,0.310,0.252,False,False,IGHV5,IGKV3,Kappa,5e-07,-8.6,ITC,25.0,18473392,2or9_H_L_P,False
6mtq,H,L,0,T,protein,,vrc42 epitope t117-f scaffold,IMMUNE SYSTEM,10/21/18,Crystal structure of VRC42.N1 Fab in complex with T117-F MPER scaffold,HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Kwon, Y.D., Law, W.H., Veradi, R., Doria-Rose, N.A., Kwong, P.D.",2.7,X-RAY DIFFRACTION,0.259,0.206,False,True,IGHV1,IGKV3,Kappa,,,,,,6mtq_H_L_T,False
7mly,G,J,0,B,protein,,glycine receptor alpha 1,"MEMBRANE PROTEIN, SIGNALING PROTEIN",04/29/21,"Cryo-EM reveals partially and fully assembled native glycine receptors,heteromeric pentamer",RATTUS NORVEGICUS; SUS SCROFA,rattus norvegicus,rattus norvegicus,sus scrofa,"Zhu, H., Gouaux, E.",2.7,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV6,Kappa,,,,,,7mly_G_J_B,False
1yjd,H,L,0,C,protein,,t-cell-specific surface glycoprotein cd28,IMMUNE SYSTEM/SIGNALING PROTEIN,01/14/05,Crystal structure of human CD28 in complex with the Fab fragment of a mitogenic antibody (5.11A1),HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Evans, E.J., Esnouf, R.M., Manso-Sancho, R., Gilbert, R.J.C., James, J.R., Sorensen, P., Stuart, D.I., Davis, S.J.",2.7,X-RAY DIFFRACTION,0.282,0.239,False,False,IGHV1,IGKV10,Kappa,,,,,,1yjd_H_L_C,False
7s8h,B,C,0,A,protein,,glycoprotein g2,VIRAL PROTEIN/IMMUNE SYSTEM,09/17/21,Structure of Lassa virus glycoprotein bound to Fab 18.5C and Fab 36.1F,LASSA VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,lassa virus,"Hastie, K.M., Enriquez, A.S.",2.7,X-RAY DIFFRACTION,0.251,0.218,False,True,IGHV4,IGKV3,Kappa,,,,,,7s8h_B_C_A,False
3nh7,K,O,0,D,protein,,bone morphogenetic protein receptor type-1a,IMMUNE SYSTEM,06/14/10,Crystal structure of the neutralizing Fab fragment AbD1556 bound to the BMP type I receptor IA,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Mueller, T.D., Harth, S., Sebald, W.",2.7,X-RAY DIFFRACTION,0.280,0.234,False,True,IGHV3,IGLV3,Lambda,2e-08,-10.5,SPR,25.0,20927405,3nh7_K_O_D,False
6b0h,D,C,0,I,protein,,pfs25,IMMUNE SYSTEM,09/14/17,Crystal structure of Pfs25 in complex with the transmission blocking antibody 1262,PLASMODIUM FALCIPARUM; HOMO SAPIENS,homo sapiens,homo sapiens,plasmodium falciparum,"McLeod, B., Scally, S.W., Bosch, A., King, C.R., Julien, J.P.",2.7,X-RAY DIFFRACTION,0.238,0.186,False,True,IGHV4,IGKV1,Kappa,,,,,,6b0h_D_C_I,False
7rfb,H,L,0,D,protein,,envelope glycoprotein e2,VIRAL PROTEIN/IMMUNE SYSTEM,07/14/21,Crystal structure of broadly neutralizing antibody mAb1198 in complex with Hepatitis C virus envelope glycoprotein E2 ectodomain,HOMO SAPIENS; HEPACIVIRUS C,homo sapiens,homo sapiens,hepacivirus c,"Flyak, A.I., Bjorkman, P.J.",2.7,X-RAY DIFFRACTION,0.262,0.215,False,True,IGHV1,IGKV2,Kappa,,,,,,7rfb_H_L_D,False
9lf8,F,E,0,R,protein,,entry-fusion complex associated protein opg095,VIRAL PROTEIN/IMMUNE SYSTEM,10/01/25,Structure of MPXV M1R and mMM1-16 Fab complex,Monkeypox virus; Mus musculus,mus musculus,mus musculus,monkeypox virus,"Zhang, Y., Zhao, R.C., Wu, L.L., Wang, Q.H.",2.7,X-RAY DIFFRACTION,0.274,0.202,False,True,IGHV1,IGKV12,Kappa,,,,,,9lf8_F_E_R,False
5mu0,K,L,0,V,peptide,,"ia03 peptide containing the citrullinated c1 epitope ofcollagen type ii,collagen alpha-1(ii) chain,ia03 peptide containing the citrullinated c1 epitope of collagen type ii ",IMMUNE SYSTEM,01/11/17,ACC1 Fab fragment in complex with citrullinated C1 epitope of CII (IA03),MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,mus musculus,"Dobritzsch, D., Holmdahl, R., Ge, C.",2.7,X-RAY DIFFRACTION,0.279,0.252,False,False,IGHV6,IGKV3,Kappa,,,,,,5mu0_K_L_V,False
9lf8,D,C,0,S,protein,,entry-fusion complex associated protein opg095,VIRAL PROTEIN/IMMUNE SYSTEM,10/01/25,Structure of MPXV M1R and mMM1-16 Fab complex,Monkeypox virus; Mus musculus,mus musculus,mus musculus,monkeypox virus,"Zhang, Y., Zhao, R.C., Wu, L.L., Wang, Q.H.",2.7,X-RAY DIFFRACTION,0.274,0.202,False,True,IGHV1,IGKV12,Kappa,,,,,,9lf8_D_C_S,False
9md6,F,J,0,C,protein,,neuraminidase,VIRAL PROTEIN/IMMUNE SYSTEM,08/27/25,Neuraminidase in complex with mAb 6-23.1,Influenza A virus; Mus musculus,mus musculus,mus musculus,influenza a virus,"Ferguson, J.A., Raghavan, S.S.R., Ward, A.B.",2.7,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV6,Kappa,,,,,,9md6_F_J_C,False
3ldb,C,B,0,A,protein,,bifunctional arginine demethylase and lysyl-hydroxylasejmjd6 ,IMMUNE SYSTEM,01/12/10,Structure of JMJD6 complexd with ALPHA-KETOGLUTARATE and Fab Fragment.,HOMO SAPIENS; CRICETULUS MIGRATORIUS,cricetulus migratorius,cricetulus migratorius,homo sapiens,"Hong, X., Zang, J., White, J., Kappler, J.W., Wang, C., Zhang, G.",2.7,X-RAY DIFFRACTION,0.285,0.250,False,True,IGHV3,IGKV8,Kappa,,,,,,3ldb_C_B_A,False
9md4,E,I,0,B,protein,,neuraminidase,VIRAL PROTEIN/IMMUNE SYSTEM,08/27/25,Neuraminidase complexed with mAb 5-16,Influenza A virus; Mus musculus,mus musculus,mus musculus,influenza a virus,"Ferguson, J.A., Raghavan, S.S.R., Ward, A.B.",2.7,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGKV6,Kappa,,,,,,9md4_E_I_B,False
7czt,I,M,0,C,protein,,spike glycoprotein,VIRAL PROTEIN,09/09/20,S protein of SARS-CoV-2 in complex bound with P5A-2G9,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Yan, R.H., Zhang, Y.Y., Li, Y.N., Zhou, Q.",2.7,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV5,Lambda,,,,,,7czt_I_M_C,False
7mhy,O,P,0,A,protein,,protein-cysteine n-palmitoyltransferase hhat,TRANSFERASE/IMMUNE SYSTEM,04/16/21,Human Hedgehog acyltransferase (HHAT) in complex with palmitoyl-CoA and two Fab antibody fragments,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Long, S.B., Jiang, Y.",2.7,ELECTRON MICROSCOPY,,,False,True,IGHV9,IGKV1,Kappa,,,,,,7mhy_O_P_A,False
6cmg,C,B,0,A,protein,,glycoprotein g,VIRAL PROTEIN/IMMUNE SYSTEM,03/05/18,Crystal Structure of the Hendra Virus Attachment G Glycoprotein Bound to a Potent Cross-Reactive Neutralizing Human Monoclonal Antibody m102.3,HENDRA VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,hendra virus,"Xu, K., Nikolov, D.",2.7,X-RAY DIFFRACTION,0.275,0.229,False,True,IGHV1,IGKV3,Kappa,2.74e-08,-10.316754097318308,SPR,,TBD,6cmg_C_B_A,False
1ktr,H,L,0,P,peptide,,oligohistidine peptide antigen,IMMUNE SYSTEM,01/17/02,Crystal Structure of the Anti-His Tag Antibody 3D5 Single-Chain Fragment (scFv) in Complex with a Oligohistidine peptide,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,,"Kaufmann, M., Lindner, P., Honegger, A., Blank, K., Tschopp, M., Capitani, G., Plueckthun, A., Gruetter, M.G.",2.7,X-RAY DIFFRACTION,0.222,0.190,True,True,IGHV1,IGKV1,Kappa,,,,,,1ktr_H_L_P,False
3mlw,H,L,0,P,peptide,,hiv-1 gp120 third variable region (v3) crown,IMMUNE SYSTEM,04/18/10,Crystal structure of anti-HIV-1 V3 Fab 1006-15D in complex with an MN V3 peptide,HIV-1 M:B_MN; HOMO SAPIENS,homo sapiens,homo sapiens,hiv-1 m,"Kong, X.-P.",2.7,X-RAY DIFFRACTION,0.291,0.214,False,False,IGHV5,IGLV1,Lambda,,,,,,3mlw_H_L_P,False
6u36,H,L,0,B,protein,,proprotein convertase subtilisin/kexin type 9,HYDROLASE/Immune System,08/21/19,PCSK9 in complex with a Fab and compound 14,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Lu, J., Soisson, S.",2.7,X-RAY DIFFRACTION,0.251,0.240,False,True,IGHV3,IGKV3,Kappa,,,,,,6u36_H_L_B,False
7rks,H,L,0,R,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,07/22/21,"Structure of the SARS-CoV-2 receptor binding domain in complex with the human neutralizing antibody Fab fragment, C118",HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus,"Jette, C.A., Bjorkman, P.J., Barnes, C.O.",2.7,X-RAY DIFFRACTION,0.247,0.195,False,True,IGHV3,IGLV4,Lambda,,,,,,7rks_H_L_R,False
4ydv,H,L,0,P,peptide,,hiv gp41 peptide gp41(596-606),IMMUNE SYSTEM,02/23/15,STRUCTURE OF THE ANTIBODY 7B2 THAT CAPTURES HIV-1 VIRIONS,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Nicely, N.I., Pemble IV, C.W.",2.7,X-RAY DIFFRACTION,0.223,0.189,False,True,IGHV3,IGKV4,Kappa,,,,,,4ydv_H_L_P,False
9cf6,H,L,0,G,protein,,germline-targeting hiv-1 gp120 engineered outer domaineodgt8 ,IMMUNE SYSTEM,06/25/25,Germline-targeting HIV-1 gp120 engineered outer domain eODgt8 in complex with Fab eOD-CL02.1,Homo sapiens; Human immunodeficiency virus 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Sarkar, A., Stanfield, R.L., Wilson, I.A.",2.7,X-RAY DIFFRACTION,0.306,0.276,False,True,IGHV3,IGLV2,Lambda,,,,,,9cf6_H_L_G,False
7s8h,H,L,0,a,protein,,unknown,VIRAL PROTEIN/IMMUNE SYSTEM,09/17/21,Structure of Lassa virus glycoprotein bound to Fab 18.5C and Fab 36.1F,LASSA VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,lassa virus,"Hastie, K.M., Enriquez, A.S.",2.7,X-RAY DIFFRACTION,0.251,0.218,False,True,IGHV3,IGKV3,Kappa,,,,,,7s8h_H_L_a,False
5f3h,E,F,0,L,protein,,growth/differentiation factor 8,Signaling Protein/Immune System,12/02/15,Structure of myostatin in complex with humanized RK35 antibody,MUS MUSCULUS; HOMO SAPIENS,mus musculus,mus musculus,homo sapiens,"Parris, K.D., Mosyak, L.",2.7,X-RAY DIFFRACTION,0.270,0.218,False,True,IGHV3,IGKV1,Kappa,,,,,,5f3h_E_F_L,False
7cj2,C,D,0,A,protein,,"chitinase 3-like 1 (cartilage glycoprotein-39), isoformcra_a ",IMMUNE SYSTEM,07/09/20,Crystal structure of the Fab antibody complexed with human YKL-40,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Choi, S., Na, J.H., Lee, S.J., Woo, J.R., Kim, D.Y., Hong, J.T., Lee, W.K.",2.7,X-RAY DIFFRACTION,0.269,0.212,False,True,IGHV3,IGKV1,Kappa,,,,,,7cj2_C_D_A,False
6bzu,A,B,0,J,peptide,,e2 as412 peptide,IMMUNE SYSTEM,12/26/17,Structure of the Hepatitis C virus envelope glycoprotein E2 antigenic region 412-423 bound to the broadly neutralizing antibody 19B3,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,hepatitis c virus,"Tzarum, N., Alemn, F., Kong, L., Wilson, I.A., Law, M.",2.7,X-RAY DIFFRACTION,0.290,0.265,False,True,IGHV3,IGKV3,Kappa,,,,,,6bzu_A_B_J,False
7kn4,M,N,0,B,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,11/04/20,Crystal structure of SARS-CoV-2 spike protein receptor-binding domain complexed with a pre-pandemic antibody S-E6 Fab,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Liu, H., Wilson, I.A.",2.7,X-RAY DIFFRACTION,0.291,0.241,False,True,IGHV4,IGLV1,Lambda,,,,,,7kn4_M_N_B,False
1hez,D,C,0,E,protein,,protein l,ANTIBODY,11/27/00,antibody-antigen complex,HOMO SAPIENS; FINEGOLDIA MAGNA,homo sapiens,homo sapiens,finegoldia magna,"Graille, M., Stura, E.A., Housden, N.G., Bottomley, S.P., Taussig, M.J., Sutton, B.J., Gore, M.G., Charbonnier, JB.",2.7,X-RAY DIFFRACTION,0.278,0.215,False,False,IGHV3,IGKV1,Kappa,1.45e-07,-9.32,Other,25.0,11587642,1hez_D_C_E,False
5wtt,A,B,0,C,peptide,,epitope peptide of cyr61,PROTEIN BINDING,12/14/16,Structure of the 093G9 Fab in complex with the epitope peptide,HOMO SAPIENS; MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,homo sapiens,homo sapiens,"Zhong, C., Hu, K., Shen, J., Ding, J.",2.7,X-RAY DIFFRACTION,0.274,0.222,False,True,IGHV3,IGKV1,Kappa,2.5e-07,-9.006821321101087,Unknown,,TBD,5wtt_A_B_C,False
7zqt,C,D,0,A,protein,,adhesin binding fucosylated histo-blood group antigen,CELL ADHESION,05/17/23,Helicobacter pylori adhesin BabA bound to neutralising human antibody.,Helicobacter pylori; Homo sapiens; Lama glama,homo sapiens,homo sapiens,helicobacter pylori,"Moonens, K., Boren, T.",2.7,X-RAY DIFFRACTION,0.281,0.225,False,True,IGHV3,IGKV1,Kappa,,,,,,7zqt_C_D_A,False
7zqt,G,H,0,E,protein,,adhesin binding fucosylated histo-blood group antigen,CELL ADHESION,05/17/23,Helicobacter pylori adhesin BabA bound to neutralising human antibody.,Helicobacter pylori; Homo sapiens; Lama glama,homo sapiens,homo sapiens,helicobacter pylori,"Moonens, K., Boren, T.",2.7,X-RAY DIFFRACTION,0.281,0.225,False,True,IGHV3,IGKV1,Kappa,,,,,,7zqt_G_H_E,False
8yww,G,F,0,B,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,07/31/24,The structure of HKU1-B S protein with bsAb1,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Xia, L.Y., Zhang, Y.Y., Zhou, Q.",2.7,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8yww_G_F_B,False
7mhy,M,N,0,A,protein,,protein-cysteine n-palmitoyltransferase hhat,TRANSFERASE/IMMUNE SYSTEM,04/16/21,Human Hedgehog acyltransferase (HHAT) in complex with palmitoyl-CoA and two Fab antibody fragments,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Long, S.B., Jiang, Y.",2.7,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,7mhy_M_N_A,False
4k9e,H,L,0,C,protein,,mast/stem cell growth factor receptor kit,IMMUNE SYSTEM,04/19/13,Crystal structure of KIT D4D5 fragment in complex with anti-Kit antibodies Fab79D,MUS MUSCULUS; HOMO SAPIENS,mus musculus,mus musculus,homo sapiens,"Resheynyak, A.V., Boggon, T.J., Lax, I., Schlessinger, J.",2.7,X-RAY DIFFRACTION,0.282,0.247,False,True,IGHV3,IGKV1,Kappa,6.4e-12,-15.27110280841462,SPR,,TBD,4k9e_H_L_C,False
9b9k,H,L,0,A,protein,,integrin alpha-5 light chain,SIGNALING PROTEIN,02/05/25,Integrin alpha-5 beta-1 in complex with MINT1526A Fab,Homo sapiens; unidentified,unidentified,unidentified,homo sapiens,"Nguyen, A., Azumaya, C.M., Campbell, M.G.",2.7,ELECTRON MICROSCOPY,,,False,False,IGHV3,IGLV3,Lambda,,,,,,9b9k_H_L_A,False
5wi9,F,E,0,B,protein,,beta-klotho,STRUCTURAL PROTEIN,07/18/17,Crystal structure of KL with an agonist Fab,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Johnstone, S., Min, X., Wang, Z.",2.7,X-RAY DIFFRACTION,0.270,0.216,False,True,IGHV3,IGKV3,Kappa,8.6e-11,-13.731800994840723,SPR,,TBD,5wi9_F_E_B,False
2oz4,H,L,0,A,protein,,intercellular adhesion molecule 1,CELL ADHESION,02/23/07,Structural Plasticity in IgSF Domain 4 of ICAM-1 Mediates Cell Surface Dimerization,HOMO SAPIENS; MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Chen, X., Kim, T.D., Carman, C.V., Mi, L., Song, G., Springer, T.A.",2.7,X-RAY DIFFRACTION,0.253,0.204,False,False,IGHV1,IGKV5,Kappa,,,,,,2oz4_H_L_A,False
5ldn,H,L,0,A,protein,,"hexon protein,hexon capsid",VIRAL PROTEIN,06/27/16,A viral capsid:antibody complex,HUMAN ADENOVIRUS C SEROTYPE 5; HUMAN ADENOVIRUS 5; MUS MUSCULUS,mus musculus,mus musculus,"human adenovirus c serotype 5, human adenovirus5 ","James, L.",2.7,X-RAY DIFFRACTION,0.223,0.164,False,True,IGHV2,IGKV6,Kappa,,,,,,5ldn_H_L_A,False
1bvk,E,D,0,F,protein,,lysozyme,COMPLEX (HUMANIZED ANTIBODY/HYDROLASE),09/16/98,HUMANIZED ANTI-LYSOZYME FV COMPLEXED WITH LYSOZYME,HOMO SAPIENS; GALLUS GALLUS,homo sapiens,homo sapiens,gallus gallus,"Holmes, M.A., Buss, T.N., Foote, J.",2.7,X-RAY DIFFRACTION,0.297,0.208,False,True,IGHV4,IGKV1,Kappa,1.4e-08,-10.53,Other,20.0,1560463,1bvk_E_D_F,False
8cii,H,L,0,E,protein,,spike protein s2',VIRUS,02/21/24,"Delta-RBD complex with BA.2-07 fab, SARS1-34 fab and C1 nanobody",Homo sapiens; Lama glama,homo sapiens,homo sapiens,homo sapiens,"Duyvesteyn, H.M.E., Ren, J., Stuart, D.I., Fry, E.E.",2.7,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV1,Kappa,,,,,,8cii_H_L_E,False
3b9k,H,L,0,B,protein,,t-cell surface glycoprotein cd8 beta chain,IMMUNE SYSTEM,11/05/07,Crystal structure of CD8alpha-beta in complex with YTS 156.7 FAB,MUS MUSCULUS; RATTUS RATTUS,rattus rattus,rattus rattus,mus musculus,"Shore, D., Wilson, I.A.",2.7,X-RAY DIFFRACTION,0.284,0.235,False,False,IGHV2,IGKV19,Kappa,,,,,,3b9k_H_L_B,False
8cin,E,F,0,B,protein,,spike glycoprotein,VIRAL PROTEIN,02/21/24,BA.4/5-5 FAB IN COMPLEX WITH SARS-COV-2 BA.4 SPIKE GLYCOPROTEIN,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Duyvesteyn, H.M.E., Ren, J., Stuart, D.I., Fry, E.E.",2.7,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGLV2,Lambda,,,,,,8cin_E_F_B,False
8ee1,B,C,0,A,protein,,6-deoxyerythronolide b synthase,"BIOSYNTHETIC PROTEIN, TRANSFERASE/IMMUNE SYSTEM",05/31/23,KS-AT didomain from module 2 of the 6-deoxyerythronolide B synthase in complex with antibody fragment AA5,Homo sapiens; Saccharopolyspora erythraea,homo sapiens,homo sapiens,saccharopolyspora erythraea,"Cogan, D.P., Brodsky, K.L., Guzman, K.M., Mathews, I.I., Khosla, C.",2.7,X-RAY DIFFRACTION,0.254,0.225,False,True,IGHV4,IGKV3,Kappa,,,,,,8ee1_B_C_A,False
8ee1,G,H,0,D,protein,,6-deoxyerythronolide b synthase,"BIOSYNTHETIC PROTEIN, TRANSFERASE/IMMUNE SYSTEM",05/31/23,KS-AT didomain from module 2 of the 6-deoxyerythronolide B synthase in complex with antibody fragment AA5,Homo sapiens; Saccharopolyspora erythraea,homo sapiens,homo sapiens,saccharopolyspora erythraea,"Cogan, D.P., Brodsky, K.L., Guzman, K.M., Mathews, I.I., Khosla, C.",2.7,X-RAY DIFFRACTION,0.254,0.225,False,True,IGHV4,IGKV3,Kappa,,,,,,8ee1_G_H_D,False
8cii,A,B,0,E,protein,,spike protein s2',VIRUS,02/21/24,"Delta-RBD complex with BA.2-07 fab, SARS1-34 fab and C1 nanobody",Homo sapiens; Lama glama,homo sapiens,homo sapiens,homo sapiens,"Duyvesteyn, H.M.E., Ren, J., Stuart, D.I., Fry, E.E.",2.7,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,8cii_A_B_E,False
8scx,H,L,0,C,protein,,mitochondrial import inner membrane translocase subunittim44 ,TRANSLOCASE,06/21/23,Cryo-EM structure of the core TIM23 complex from S. cerevisiae,Mus musculus; Saccharomyces cerevisiae,mus musculus,mus musculus,saccharomyces cerevisiae,"Sim, S.I., Park, E.",2.7,ELECTRON MICROSCOPY,,,False,True,IGHV2,IGKV3,Kappa,,,,,,8scx_H_L_C,False
6hhc,H,L,0,A,protein,,coagulation factor xi,BLOOD CLOTTING,08/27/18,"Allosteric Inhibition as a new mode of Action for BAY 1213790, a Neutralizing Antibody Targeting the Activated form of Coagulation Factor XI",HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Schaefer, M., Buchmueller, A., Dittmer, F., Strassburger, J., Wilmen, A.",2.7,X-RAY DIFFRACTION,0.314,0.227,False,True,IGHV3,IGKV1,Kappa,,,,,,6hhc_H_L_A,False
5tlk,H,G,0,Y,protein,,cd27 antigen,IMMUNE SYSTEM,10/11/16,COMPLEX BETWEEN HUMAN CD27 AND FAB FRAGMENTS OF ANTIBODIES M2177 AND H2191,"HOMO SAPIENS; MUS MUSCULUS, HOMO SAPIENS","mus musculus, homo sapiens","mus musculus, homo sapiens",homo sapiens,"Teplyakov, A., Obmolova, G., Malia, T., Gilliland, G.L.",2.7,X-RAY DIFFRACTION,0.263,0.213,False,True,IGHV3,IGKV1,Kappa,,,,,,5tlk_H_G_Y,False
2h32,H,A,0,B,protein,,immunoglobulin omega chain,IMMUNE SYSTEM,05/22/06,Crystal structure of the pre-B cell receptor,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Bankovich, A.J.",2.7,X-RAY DIFFRACTION,0.295,0.267,False,True,unknown,unknown,unknown,,,,,,2h32_H_A_B,False
5wi9,H,L,0,A,protein,,beta-klotho,STRUCTURAL PROTEIN,07/18/17,Crystal structure of KL with an agonist Fab,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Johnstone, S., Min, X., Wang, Z.",2.7,X-RAY DIFFRACTION,0.270,0.216,False,True,IGHV3,IGKV3,Kappa,8.6e-11,-13.731800994840723,SPR,,TBD,5wi9_H_L_A,False
9jqt,B,C,0,A,protein,,cytokine receptor common subunit gamma,MEMBRANE PROTEIN,12/18/24,Structure of interleukin receptor common gamma chain (IL2Rgamma/CD132) in complex with 2D4,Homo sapiens; Lama glama,homo sapiens,homo sapiens,homo sapiens,"Lu, Q.J., Yin, H.Q.",2.7,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,9jqt_B_C_A,False
4qww,D,C,0,B,protein,,acetylcholinesterase,HYDROLASE/IMMUNE SYSTEM,07/17/14,Crystal structure of the Fab410-BfAChE complex,BUNGARUS FASCIATUS; MUS MUSCULUS,mus musculus,mus musculus,bungarus fasciatus,"Bourne, Y., Renault, L., Marchot, P.",2.7,X-RAY DIFFRACTION,0.239,0.199,False,False,IGHV10,IGKV4,Kappa,,,,,,4qww_D_C_B,False
6bck,H,L,0,G,protein,,clade a/e 93th057 hiv-1 gp120 core,VIRAL PROTEIN/IMMUNE SYSTEM,10/20/17,Crystal Structure of Broadly Neutralizing Antibody N49P7 in Complex with HIV-1 Clade AE strain 93TH057 gp120 core.,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Tolbert, W.D., Gohain, N., Pazgier, M.",2.7,X-RAY DIFFRACTION,0.285,0.225,False,True,unknown,IGLV2,Lambda,8.6e-10,-12.367556905430469,Unknown,,TBD,6bck_H_L_G,False
6bzu,E,F,0,K,peptide,,e2 as412 peptide,IMMUNE SYSTEM,12/26/17,Structure of the Hepatitis C virus envelope glycoprotein E2 antigenic region 412-423 bound to the broadly neutralizing antibody 19B3,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,hepatitis c virus,"Tzarum, N., Alemn, F., Kong, L., Wilson, I.A., Law, M.",2.7,X-RAY DIFFRACTION,0.290,0.265,False,True,IGHV3,IGKV3,Kappa,,,,,,6bzu_E_F_K,False
6iek,B,C,0,A,protein,,nsmgngc,STRUCTURAL PROTEIN/IMMUNE SYSTEM,04/10/19,Structure of RVFV Gn and human monoclonal antibody R12,RIFT VALLEY FEVER VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,rift valley fever virus,"Wang, Q.H., Wu, Y., Gao, F., Qi, J.X., Gao, G.F.",2.7,X-RAY DIFFRACTION,0.258,0.225,False,True,IGHV1,IGLV5,Lambda,,,,,,6iek_B_C_A,False
9dzj,G,K,0,A,protein,,atrial natriuretic peptide receptor 1,MEMBRANE PROTEIN,01/21/26,Human GC-A bound to ANP and 2xREGN5308,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Liu, S., Huang, X.-Y.",2.7,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,9dzj_G_K_A,False
8yx1,H,L,0,R,protein,,tumor necrosis factor receptor superfamily member 5,IMMUNE SYSTEM,05/08/24,CD40 in complex with Bleselumab Fab,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Caaveiro, J.M.M., Fernandez-Perez, J., Tsumoto, K.",2.7,X-RAY DIFFRACTION,0.265,0.204,False,True,IGHV4,IGKV1,Kappa,,,,,,8yx1_H_L_R,False
8vgp,H,L,0,A,protein,,angiopoietin-2,CYTOKINE/IMMUNE SYSTEM,10/30/24,CryoEM structure of Angiopoietin-2 in complex with engineered conformationally rigid Fab 5A12.6DS,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Kung, J.E., Sudhamsu, J.",2.7,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8vgp_H_L_A,False
3vg9,C,B,0,A,protein,,adenosine receptor a2a,SIGNALING PROTEIN,08/04/11,Crystal structure of human adenosine A2A receptor with an allosteric inverse-agonist antibody at 2.7 A resolution,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Hino, T., Arakawa, T., Iwanari, H., Yurugi-Kobayashi, T., Ikeda-Suno, C., Nakada-Nakura, Y., Kusano-Arai, O., Weyand, S., Shimamura, T., Nomura, N., Cameron, A.D., Kobayashi, T., Hamakubo, T., Iwata, S., Murata, T.",2.7,X-RAY DIFFRACTION,0.246,0.206,False,False,IGHV1,IGKV12,Kappa,4.4000000000000005e-09,-11.400370293980798,SPR,,TBD,3vg9_C_B_A,False
7x08,J,N,0,C,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,03/09/22,S protein of SARS-CoV-2 in complex with 2G1,Homo sapiens; Severe acute respiratory syndrome coronavirus,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus,"Guo, Y.Y., Zhang, Y.Y., Zhou, Q.",2.7,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV2,Lambda,,,,,,7x08_J_N_C,False
3s37,H,L,0,X,protein,,vascular endothelial growth factor receptor 2,IMMUNE SYSTEM/Transferase,05/17/11,Structural basis for the function of two anti-VEGF receptor antibodies,"MUS MUSCULUS, HOMO SAPIENS; HOMO SAPIENS","mus musculus, homo sapiens","mus musculus, homo sapiens",homo sapiens,"Franklin, M.C.",2.7,X-RAY DIFFRACTION,0.315,0.282,False,True,IGHV3,IGKV1,Kappa,,,,,,3s37_H_L_X,False
8dz3,Q,R,0,I,protein,,circumsporozoite protein,IMMUNE SYSTEM,08/02/23,Cryo-EM structure of 337 Fab in complex with recombinant shortened Plasmodium falciparum circumsporozoite protein (rsCSP),Homo sapiens; Plasmodium falciparum,homo sapiens,homo sapiens,plasmodium falciparum,"Martin, G.M., Ward, A.B.",2.7,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV3,Kappa,,,,,,8dz3_Q_R_I,False
8e6j,E,I,0,B,protein,,neuraminidase,VIRAL PROTEIN,08/09/23,3H03 Fab in complex with influenza virus neuraminidase from A/Brevig Mission/1/1918 (H1N1),Homo sapiens; Influenza A virus (A/Brevig Mission/1/1918(H1N1)),homo sapiens,homo sapiens,influenza a virus (a/brevigmission/1/1918(h1n1)) ,"Turner, H.L., Ozorowski, G., Ward, A.B.",2.7,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV1,Kappa,,,,,,8e6j_E_I_B,False
7a3q,H,L,0,A,protein,,envelope protein e,VIRAL PROTEIN,08/18/20,Crystal structure of dengue 4 virus envelope glycoprotein in complex with the scFv fragment of the broadly neutralizing human antibody EDE1 C10,DENGUE VIRUS 4; HOMO SAPIENS,homo sapiens,homo sapiens,dengue virus 4,"Sharma, A., Vaney, M.C., Guardado-Calvo, P., Duquerroy, S., Rouvinski, A., Rey, F.A.",2.7,X-RAY DIFFRACTION,0.239,0.216,False,True,IGHV1,IGLV2,Lambda,,,,,,7a3q_H_L_A,False
7yk4,I,M,0,B,protein,,tumor necrosis factor receptor superfamily member 4,ANTITUMOR PROTEIN/IMMUNE SYSTEM,08/09/23,ox40-antibody,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Zhou, A.",2.7,X-RAY DIFFRACTION,0.299,0.233,False,True,IGHV1,IGKV1,Kappa,,,,,,7yk4_I_M_B,False
8vye,H,L,0,K,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,01/08/09,"SARS-CoV-2 S (C.37 Lambda variant) plus S309, S2L20, and S2X303 Fabs",Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"McCallum, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)",2.7,ELECTRON MICROSCOPY,,,False,True,IGHV2,IGLV3,Lambda,,,,,,8vye_H_L_K,False
7o9s,H,L,0,A,protein,,envelope polyprotein,VIRAL PROTEIN,04/16/21,Hantaan virus Gn in complex with Fab nnHTN-Gn2,ORYCTOLAGUS CUNICULUS; HANTAAN ORTHOHANTAVIRUS,oryctolagus cuniculus,oryctolagus cuniculus,hantaan orthohantavirus,"Rissanen, I., Bowden, T.A., Huiskonen, J.T., Stass, R.",2.7,X-RAY DIFFRACTION,0.267,0.211,False,True,IGHV1,IGKV1,Kappa,,,,,,7o9s_H_L_A,False
8gav,H,L,0,A,protein,,neuraminidase,VIRAL PROTEIN/IMMUNE SYSTEM,02/28/24,Structure of human NDS.3 Fab in complex with influenza virus neuraminidase from A/Darwin/09/2021 (H3N2),Homo sapiens; Influenza A virus,homo sapiens,homo sapiens,influenza a virus,"Tsybovsky, Y., Lederhofer, J., Kwong, P.D., Kanekiyo, M.",2.7,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV2,Lambda,,,,,,8gav_H_L_A,False
9qub,F,E,0,B,protein,,sodium/hydrogen exchanger 9b2,TRANSPORT PROTEIN,05/14/25,Cryo-EM structure of the human NHA2-Fab complex,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Jung, S., Drew, D.",2.7,ELECTRON MICROSCOPY,,,False,False,IGHV1,IGKV10,Kappa,,,,,,9qub_F_E_B,False
2xtj,D,B,0,A,protein,,proprotein convertase subtilisin/kexin type 9,HYDROLASE/ANTIBODY,10/10/10,The crystal structure of PCSK9 in complex with 1D05 Fab,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Di Marco, S., Volpari, C., Carfi, A.",2.7,X-RAY DIFFRACTION,0.25944,0.19992,False,True,IGHV1,IGKV1D,Kappa,4.4e-09,-11.39,SPR,25.0,20959675,2xtj_D_B_A,False
3sqo,H,L,0,A,protein,,proprotein convertase subtilisin/kexin type 9,HYDROLASE/Immune system,07/05/11,PCSK9 J16 Fab complex,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Strop, P.",2.7,X-RAY DIFFRACTION,0.283,0.223,False,True,IGHV1,IGKV1D,Kappa,5e-12,-15.417363375832576,SPR,,TBD,3sqo_H_L_A,False
9dhy,A,B,0,C,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,04/16/25,Structure of SARS-CoV-2 spike in complex with antibody Fab COVIC-154,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Yu, X., Saphire, E.O.",2.7,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,9dhy_A_B_C,False
7uij,A,B,0,D,protein,,outer surface protein c,IMMUNE SYSTEM,04/05/23,Structural studies of B5-OspC complex,Borreliella burgdorferi B31; Mus musculus,mus musculus,mus musculus,borreliella burgdorferi b31,"Rudolph, M.J., Mantis, N.",2.701,X-RAY DIFFRACTION,0.256,0.204,False,True,IGHV9,IGKV12,Kappa,,,,,,7uij_A_B_D,False
5gmq,B,C,0,A,protein,,s protein,VIRAL PROTEIN/IMMUNE SYSTEM,07/15/16,Structure of MERS-CoV RBD in complex with a fully human antibody MCA1,MIDDLE EAST RESPIRATORY SYNDROME CORONAVIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,middle east respiratory syndrome coronavirus,"Chen, C., Wang, J.M., Zou, T.T., Gao, X.P., Cui, S., Jin, Q.",2.703,X-RAY DIFFRACTION,0.285,0.239,False,True,IGHV1,IGKV3,Kappa,,,,,,5gmq_B_C_A,False
7cm4,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN,07/24/20,Crystal Structure of COVID-19 virus spike receptor-binding domain complexed with a neutralizing antibody CT-P59,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Kim, Y.G., Jeong, J.H., Bae, J.S., Lee, J.H.",2.71,X-RAY DIFFRACTION,0.242,0.217,False,True,IGHV2,IGLV1,Lambda,,,,,,7cm4_H_L_A,False
8sdg,G,I,0,C,protein,,spike protein s1,IMMUNE SYSTEM,03/13/24,Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody CC25.43,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Yuan, M., Wilson, I.A.",2.71,X-RAY DIFFRACTION,0.308,0.255,False,True,IGHV3,IGKV1,Kappa,,,,,,8sdg_G_I_C,False
7rm0,E,F,0,R,peptide,,peptide from circumsporozoite protein variant vk247,ANTIMICROBIAL PROTEIN,07/26/21,Antibody 2E10.E9 in complex with P. vivax CSP peptide ANGAGNQPGANGAGNQPG,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,plasmodium vivax,"Kucharska, I., Ivanochko, D., Julien, J.P.",2.71,X-RAY DIFFRACTION,0.246,0.209,False,True,IGHV9,IGKV8,Kappa,,,,,,7rm0_E_F_R,False
3uc0,I,M,0,B,protein,,envelope protein,VIRAL PROTEIN/IMMUNE SYSTEM,10/25/11,Crystal structure of domain I of the envelope glycoprotein ectodomain from dengue virus serotype 4 in complex with the fab fragment of the chimpanzee monoclonal antibody 5H2,DENGUE VIRUS 4; PAN TROGLODYTES,pan troglodytes,pan troglodytes,dengue virus 4,"Cockburn, J.J.B., Stura, E.A., Navarro-Sanchez, M.E., Rey, F.A.",2.71,X-RAY DIFFRACTION,0.252,0.220,False,True,IGHV4,IGKV1,Kappa,1.3e-09,-12.6,Other,37.0,22139356,3uc0_I_M_B,False
1xgy,H,L,0,P,peptide,,rhodopsin epitope mimetic peptide,immune system,09/17/04,Crystal Structure of Anti-Meta I Rhodopsin Fab Fragment K42-41L,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,,"Piscitelli, C.L., Angel, T.E., Bailey, B.W., Lawerence, C.M.",2.71,X-RAY DIFFRACTION,0.272,0.233,False,False,IGHV1,IGKV2,Kappa,,,,,,1xgy_H_L_P,False
5ukr,H,L,0,G,protein,,chimeric b.yu2 gp120 core derived from hiv-1 env,IMMUNE SYSTEM,01/23/17,Structure of unliganded anti-gp120 CD4bs antibody DH522.2 Fab in complex with a gp120 core,MACACA MULATTA; HUMAN IMMUNODEFICIENCY VIRUS 1,macaca mulatta,macaca mulatta,human immunodeficiency virus 1,"Nicely, N.I.",2.712,X-RAY DIFFRACTION,0.265,0.201,False,True,IGHV4,IGLV2,Lambda,,,,,,5ukr_H_L_G,False
8t03,C,D,0,A,protein,,protein myomaker,MEMBRANE PROTEIN,09/27/23,Structure of mouse Myomaker bound to Fab18G7 in detergent,Mus musculus,mus musculus,mus musculus,mus musculus,"Long, T., Li, X.",2.72,ELECTRON MICROSCOPY,,,False,True,IGHV8,IGKV19,Kappa,,,,,,8t03_C_D_A,False
6mi2,D,E,0,F,protein,,tumor necrosis factor receptor superfamily member 9,IMMUNE SYSTEM,09/19/18,Structure of the human 4-1BB / Utomilumab Fab complex,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Kimberlin, C.R., Chin, S.M., Roe-Zurz, Z., Xu, A., Yang, Y.",2.72,X-RAY DIFFRACTION,0.278,0.238,False,True,IGHV5,IGLV3,Lambda,6.900000000000002e-08,-9.769557801336566,SPR,,TBD,6mi2_D_E_F,False
6xkp,H,L,0,A,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,06/26/20,Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody CV07-270,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Liu, H., Yuan, M., Zhu, X., Wu, N.C., Wilson, I.A.",2.72,X-RAY DIFFRACTION,0.269,0.220,False,True,IGHV3,IGLV2,Lambda,,,,,,6xkp_H_L_A,False
8qya,H,L,0,A,peptide,,chains,IMMUNE SYSTEM,01/17/24,"J22.9-FNY, fully humanized, CDR optimized Fab Fragment based on chimeric J22.9-xi IgG against BCMA; with VH CDR2 glycosylation",Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Marino, S.F., Daumke, O.",2.72,X-RAY DIFFRACTION,0.297,0.244,False,True,IGHV4,IGKV3,Kappa,,,,,,8qya_H_L_A,False
7pi7,E,F,0,D,protein,,cysteine-rich protective antigen,IMMUNE SYSTEM,08/19/21,PfCyRPA bound to monoclonal antibody Cy.002 Fab fragment,PLASMODIUM FALCIPARUM (ISOLATE 3D7); GALLUS GALLUS,gallus gallus,gallus gallus,plasmodium falciparum (isolate 3d7),"Ragotte, R.J., Higgins, M.K.",2.72,X-RAY DIFFRACTION,0.301,0.273,False,True,IGHV14,IGKV3,Kappa,,,,,,7pi7_E_F_D,False
7bbj,H,L,0,A,protein,,5'-nucleotidase,IMMUNE SYSTEM,12/17/20,CD73 in complex with the humanized antagonistic antibody mAb19,HOMO SAPIENS; UNIDENTIFIED,unidentified,unidentified,homo sapiens,"Boettcher, J., Han, F.",2.72,X-RAY DIFFRACTION,0.234,0.208,False,True,IGHV1,IGKV1,Kappa,,,,,,7bbj_H_L_A,False
4ye4,H,L,0,G,protein,,ht593.1 gp120,Viral protein/Immune system,02/23/15,Crystal Structure of Neutralizing Antibody HJ16 in Complex with HIV-1 gp120,HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS,homo sapiens,homo sapiens,human immunodeficiency virus,"Kwong, P.D., Chen, L., Zhou, T.",2.72,X-RAY DIFFRACTION,0.242,0.187,False,True,unknown,unknown,unknown,,,,,,4ye4_H_L_G,False
5yoy,H,E,0,C,protein,,tumor necrosis factor,IMMUNE SYSTEM,10/31/17,Crystal structure of the human tumor necrosis factor in complex with golimumab Fv,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Ono, M., Horita, S., Sato, Y., Nomura, Y., Iwata, S., Nomura, N.",2.727,X-RAY DIFFRACTION,0.234,0.190,False,True,IGHV3,IGKV3,Kappa,1.8e-11,-14.658430977236662,Unknown,,TBD,5yoy_H_E_C,False
7vaz,D,C,0,G,peptide,,mucin-1 subunit alpha,IMMUNE SYSTEM,08/31/22,Crystal structure of antibody 14A in complex with MUC1 glycopeptide(GlycoS),Mus musculus; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Niu, J., Xu, L., Meng, B., Han, Y.B., Yang, B.",2.73,X-RAY DIFFRACTION,0.264,0.209,False,True,IGHV4,IGLV1,Lambda,,,,,,7vaz_D_C_G,False
7mjk,H,I,0,C,protein,,spike glycoprotein,VIRAL PROTEIN/Immune System,04/20/21,Cryo-EM structure of the SARS-CoV-2 N501Y mutant spike protein ectodomain bound to Fab ab1 (class 2),SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; SYNTHETIC CONSTRUCT,synthetic construct,synthetic construct,severe acute respiratory syndrome coronavirus2 ,"Zhu, X., Mannar, D., Srivastava, S.S., Berezuk, A.M., Demers, J.P., Saville, J.W., Leopold, K., Li, W., Dimitrov, D.S., Tuttle, K.S., Zhou, S., Chittori, S., Subramaniam, S.",2.73,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV3,Kappa,,,,,,7mjk_H_I_C,False
9mnz,D,E,0,F,protein,,mbp-pra/g,TRANSPORT PROTEIN/IMMUNE SYSTEM,03/05/25,Cryo-EM structure of human MPC in complex with UK5099 in nanodiscs,Escherichia coli; Homo sapiens; Mus musculus; synthetic construct,mus musculus,mus musculus,escherichia coli,"Zhang, J., He, Z., Feng, L.",2.73,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGKV8,Kappa,,,,,,9mnz_D_E_F,False
6nm6,U,V,0,G,protein,,envelope glycoprotein gp120,IMMUNE SYSTEM,01/10/19,Crystal Structure of HIV-1 BG505 SOSIP.664 Prefusion Env Trimer Bound to N6 FR3-03 scFv in Complex with Crystallization Chaperones 3H109L Fab and 35O22 scFv at 3.2 Angstrom,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Lai, Y.-T., Kwong, P.D.",2.739,X-RAY DIFFRACTION,0.288,0.240,False,True,unknown,unknown,unknown,,,,,,6nm6_U_V_G,False
8c3v,C,D,0,Y,protein,,spike protein s1,VIRAL PROTEIN,03/22/23,SARS-CoV-2 Delta-RBD complexed with BA.2-13 Fab and C1 nanobody,Homo sapiens; Lama glama; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, D., Ren, J., Stuart, D.I.",2.74,X-RAY DIFFRACTION,0.258,0.216,False,True,IGHV3,IGKV1,Kappa,,,,,,8c3v_C_D_Y,False
9ivk,H,L,0,A,protein,,hbc599 membrane protein binder,MEMBRANE PROTEIN/IMMUNE SYSTEM,11/20/24,cryo-EM structure of a tmFAP,artificial sequences; Homo sapiens,homo sapiens,homo sapiens,artificial sequences,"Sun, K., Zhu, J.Y., Liang, M.F., Lu, P.L.",2.74,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,9ivk_H_L_A,False
7syy,H,L,0,A,protein,,attachment glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,11/25/21,Hendra virus G protein head domain in complex with cross-neutralizing murine antibody hAH1.3,HENDRA HENIPAVIRUS; MUS MUSCULUS,mus musculus,mus musculus,hendra henipavirus,"Xu, K., Xu, Y.",2.74,X-RAY DIFFRACTION,0.233,0.211,False,True,IGHV9,IGKV1,Kappa,,,,,,7syy_H_L_A,False
5vco,D,C,0,E,protein,,peptidase 1,IMMUNE SYSTEM,03/31/17,THE CRYSTAL STRUCTURE OF DER P 1 ALLERGEN COMPLEXED WITH FAB FRAGMENT OF MAB 10B9,MUS MUSCULUS; DERMATOPHAGOIDES PTERONYSSINUS,mus musculus,mus musculus,dermatophagoides pteronyssinus,"Osinski, T., Majorek, K.A., Pomes, A., Offermann, L.R., Osinski, S., Glesner, J., Vailes, L.D., Chapman, M.D., Minor, W., Chruszcz, M.",2.74,X-RAY DIFFRACTION,0.261,0.200,False,True,IGHV3,IGKV10,Kappa,,,,,,5vco_D_C_E,False
5u3j,H,L,0,A,peptide,,gp41 mper peptide,IMMUNE SYSTEM/VIRAL PROTEIN,12/02/16,Crystal Structure of DH511.1 Fab in Complex with HIV-1 gp41 MPER Peptide,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Ofek, G., Wu, L., Lougheed, C.S., Williams, L.D., Nicely, N.I., Haynes, B.F.",2.74,X-RAY DIFFRACTION,0.264,0.229,False,True,IGHV3,IGKV1,Kappa,,,,,,5u3j_H_L_A,False
5utz,H,L,0,D,protein,,interleukin-2,CYTOKINE/IMMUNE SYSTEM,02/15/17,Human IL-2/Fab complex,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Jude, K.M., Garcia, K.C.",2.747,X-RAY DIFFRACTION,0.248,0.193,False,True,IGHV4,IGLV6,Lambda,1.879e-09,-11.904493814008964,SPR,,TBD,5utz_H_L_D,False
7mdj,A,B,0,C,protein,,ph-gated potassium channel kcsa,MEMBRANE PROTEIN,04/05/21,The structure of KcsA in complex with a synthetic Fab,SYNTHETIC CONSTRUCT; STREPTOMYCES LIVIDANS,synthetic construct,synthetic construct,streptomyces lividans,"Rohaim, A., Slezak, T., Blackowicz, L., Kossiakoff, A., Roux, B.",2.75,X-RAY DIFFRACTION,0.265,0.201,False,True,IGHV3,IGKV1,Kappa,,,,,,7mdj_A_B_C,False
6ppg,H,L,0,F,protein,,interleukin-17f,CYTOKINE,07/06/19,Crystal structure of IL17FF bound to Fab fragments of MCAF5352A,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Huang, C.S., Yin, J.P., Hymowitz, S.G.",2.75,X-RAY DIFFRACTION,0.275,0.224,False,True,IGHV3,IGKV3,Kappa,,,,,,6ppg_H_L_F,False
7shu,C,D,0,A,protein,,immunoglobulin heavy constant epsilon,IMMUNE SYSTEM,10/11/21,IgE-Fc in complex with omalizumab variant C02,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Pennington, L.F., Jardetzky, T.J., Kleinboelting, S.",2.75,X-RAY DIFFRACTION,0.275,0.220,False,True,IGHV3,IGKV1,Kappa,,,,,,7shu_C_D_A,False
6wh9,B,C,0,G,protein,,kr1,OXIDOREDUCTASE/IMMUNE SYSTEM,04/07/20,Ketoreductase from module 1 of the 6-deoxyerythronolide B synthase (KR1) in complex with antibody fragment (Fab) 1D10,SACCHAROPOLYSPORA ERYTHRAEA; HOMO SAPIENS,homo sapiens,homo sapiens,saccharopolyspora erythraea,"Cogan, D.P., Mathews, I.I., Khosla, C.",2.75,X-RAY DIFFRACTION,0.271,0.228,False,True,IGHV1,IGLV7,Lambda,,,,,,6wh9_B_C_G,False
7pa9,b,a,0,H,protein,,unknown,VIRAL PROTEIN,01/08/09,JC polyomavirus VP1 in complex with Fab 98D3,Homo sapiens; JC polyomavirus,,,,"Stroeh, L.J., Harprecht, C., Freytag, J., Stehle, T.",2.75,X-RAY DIFFRACTION,0.263,0.207,False,False,IGHV3,IGKV1,Kappa,,,,,,7pa9_b_a_H,False
8zpq,H,L,0,F,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,06/11/25,Crystal structure of SARS-Cov-2-BQ1.1-RBD and 70fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Wu, Y., Gao, F.",2.75,X-RAY DIFFRACTION,0.282,0.234,False,True,IGHV3,IGLV3,Lambda,,,,,,8zpq_H_L_F,False
6ion,H,L,0,A,protein,,ly6/plaur domain-containing protein 3,IMMUNE SYSTEM,10/30/18,The complex of C4.4A with its antibody 11H10 Fab fragment,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Huang, M.D., Jiang, Y.B., Yuan, C., Lin, L.",2.75,X-RAY DIFFRACTION,0.255,0.197,False,False,IGHV8,IGKV5,Kappa,,,,,,6ion_H_L_A,False
7wgt,H,L,0,A,protein,,sodium-dependent dopamine transporter,MEMBRANE PROTEIN,12/28/21,"X-ray structure of thermostabilized Drosophila dopamine transporter with GABA transporter1-like substitutions in the binding site, in complex with NO711.",Drosophila melanogaster; Mus musculus,mus musculus,mus musculus,drosophila melanogaster,"Joseph, D., Penmatsa, A.",2.75,X-RAY DIFFRACTION,0.296,0.248,False,True,IGHV5,IGKV4,Kappa,,,,,,7wgt_H_L_A,False
8bbo,H,L,0,R,protein,,spike glycoprotein,VIRAL PROTEIN,03/22/23,SARS-CoV-2 Delta-RBD complexed with BA.2-36 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, D., Ren, J., Stuart, D.I.",2.75,X-RAY DIFFRACTION,0.252,0.224,False,True,IGHV4,IGKV1,Kappa,,,,,,8bbo_H_L_R,False
7jkt,H,L,0,G,protein,,hiv-1 gp120 core from strain d45-01dg5,Viral Protein/Immune System,07/28/20,Crystal structure of vaccine-elicited broadly neutralizing VRC01-class antibody 2413a in complex with HIV-1 gp120 core,HUMAN IMMUNODEFICIENCY VIRUS 1; MUS MUSCULUS,mus musculus,mus musculus,human immunodeficiency virus 1,"Zhou, T., Chen, X., Kwong, P.D., Mascola, J.R.",2.75,X-RAY DIFFRACTION,0.252,0.197,False,True,IGHV1,IGKV3,Kappa,,,,,,7jkt_H_L_G,False
2qqk,H,L,0,A,protein,,neuropilin-2,SIGNALING PROTEIN,07/26/07,Neuropilin-2 a1a2b1b2 Domains in Complex with a Semaphorin-Blocking Fab,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Appleton, B.A., Wiesmann, C.",2.75,X-RAY DIFFRACTION,0.243,0.186,False,True,IGHV3,IGKV1D,Kappa,,,,,,2qqk_H_L_A,False
8tui,H,L,0,A,protein,,killer cell immunoglobulin-like receptor 2dl3,IMMUNE SYSTEM,12/06/23,Crystal structure of Fab-Lirilumab bound to KIR2DL3,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Lorig-Roach, N., DuBois, R.M.",2.75,X-RAY DIFFRACTION,0.254,0.211,False,True,IGHV1,IGKV3,Kappa,,,,,,8tui_H_L_A,False
7st8,H,L,0,S,peptide,,astacin-like metalloendopeptidase,IMMUNE SYSTEM,11/12/21,Crystal structure of 7H2.2 Fab in complex with SAS1B C-terminal region,MUS MUSCULUS; HOMO SAPIENS,mus musculus,mus musculus,homo sapiens,"Legg, M.S.G., Evans, S.V.",2.75,X-RAY DIFFRACTION,0.270,0.231,False,True,IGHV8,IGKV3,Kappa,,,,,,7st8_H_L_S,False
7pa9,M,N,0,A,protein,,unknown,VIRAL PROTEIN,01/08/09,JC polyomavirus VP1 in complex with Fab 98D3,Homo sapiens; JC polyomavirus,,,,"Stroeh, L.J., Harprecht, C., Freytag, J., Stehle, T.",2.75,X-RAY DIFFRACTION,0.263,0.207,False,False,IGHV3,IGKV1,Kappa,,,,,,7pa9_M_N_A,False
7pa9,X,U,0,G,protein,,unknown,VIRAL PROTEIN,01/08/09,JC polyomavirus VP1 in complex with Fab 98D3,Homo sapiens; JC polyomavirus,,,,"Stroeh, L.J., Harprecht, C., Freytag, J., Stehle, T.",2.75,X-RAY DIFFRACTION,0.263,0.207,False,False,IGHV3,IGKV1,Kappa,,,,,,7pa9_X_U_G,False
4o58,H,L,0,A,protein,,hemagglutinin ha1 chain,VIRAL PROTEIN/IMMUNE SYSTEM,12/19/13,Crystal structure of broadly neutralizing antibody F045-092 in complex with A/Victoria/3/1975 (H3N2) influenza hemagglutinin,INFLUENZA A VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus,"Lee, P.S., Wilson, I.A.",2.7501,X-RAY DIFFRACTION,0.224,0.177,False,True,IGHV1,IGLV1,Lambda,,,,,,4o58_H_L_A,False
5gzo,H,L,0,A,protein,,genome polyprotein,VIRAL PROTEIN/IMMUNE SYSTEM,09/29/16,Structure of neutralizing antibody bound to Zika envelope protein,HOMO SAPIENS; ZIKA VIRUS,homo sapiens,homo sapiens,zika virus,"Wang, Q., Yang, H., Liu, X., Dai, L., Ma, T., Qi, J., Wong, G., Peng, R., Liu, S., Li, J., Li, S., Song, J., Liu, J., He, J., Yuan, H., Xiong, Y., Liao, Y., Li, J., Yang, J., Tong, Z., Griffin, B., Bi, Y., Liang, M., Xu, X., Cheng, G., Wang, P., Qiu, X., Kobinger, G., Shi, Y., Yan, J., Gao, G.F.",2.755,X-RAY DIFFRACTION,0.277,0.231,False,True,IGHV4,IGKV1,Kappa,1.6359999999999998e-07,-9.258056023338968,SPR,,TBD,5gzo_H_L_A,False
7dc8,B,A,0,C,protein,,interleukin-6 receptor subunit alpha,IMMUNE SYSTEM,10/23/20,Crystal structure of Switch Ab Fab and hIL6R in complex with ATP,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Kadono, S., Fukami, T.A., Kawauchi, H., Torizawa, T., Mimoto, F.",2.757,X-RAY DIFFRACTION,0.278,0.207,False,True,IGHV3,IGLV2,Lambda,,,,,,7dc8_B_A_C,False
5l0q,C,B,0,A,protein,,disintegrin and metalloproteinase domain-containing protein10 ,HYDROLASE/IMMUNE SYSTEM,07/28/16,Crystal structure of the complex between ADAM10 D+C domain and a conformation specific mAb 8C7.,HOMO SAPIENS; BOS TAURUS,homo sapiens,homo sapiens,bos taurus,"Xu, K., Saha, N., Nikolov, D.B.",2.759,X-RAY DIFFRACTION,0.251,0.203,False,True,IGHV1,IGKV5,Kappa,,,,,,5l0q_C_B_A,False
7enf,P,O,0,B,protein,,spike glycoprotein,VIRAL PROTEIN,04/16/21,Cryo-EM structure of the SARS-CoV-2 S-6P in complex with Fab30,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Wang, X.F., Zhu, Y.Q.",2.76,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV4,Kappa,,,,,,7enf_P_O_B,False
9pzx,J,K,0,B,protein,,"glutamate receptor ionotropic, nmda 2a",TRANSPORT PROTEIN,12/17/25,"GluN1/GluN2A in complex with 3D2 Fab, local ATD dimer",Mus musculus; Rattus norvegicus,mus musculus,mus musculus,rattus norvegicus,"Kim, J., Gouaux, E.",2.76,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,9pzx_J_K_B,False
8sic,A,B,0,E,protein,,envelope glycoprotein gp350,VIRAL PROTEIN/IMMUNE SYSTEM,04/17/24,"Crystal structure of Epstein-Barr virus glycoprotein 350 (gp350) in complex with Cy137C02, a monoclonal antibody isolated from macaques immunized with a gp350 nanoparticle vaccine",Human herpesvirus 4; Macaca fascicularis,macaca fascicularis,macaca fascicularis,human herpesvirus 4,"Joyce, M.G., Jensen, J.L., Chen, W.H., Kanekiyo, M.",2.76,X-RAY DIFFRACTION,0.295,0.246,False,True,IGHV4,IGLV1,Lambda,,,,,,8sic_A_B_E,False
9o4q,H,L,0,A,protein,,neuraminidase,VIRAL PROTEIN/IMMUNE SYSTEM,08/13/25,Cryo-EM structure of Z1A11-GL Fab in complex with influenza virus neuraminidase from A/California/07/2009 (H1N1),Homo sapiens; Influenza A virus (A/California/07/2009(H1N1)),homo sapiens,homo sapiens,influenza a virus (a/california/07/2009(h1n1)),"Jo, G., Ward, A.B.",2.76,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV2,Kappa,,,,,,9o4q_H_L_A,False
7u2d,H,L,0,A,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,02/23/22,Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody ADG20,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhu, X., Yuan, M., Wilson, I.A.",2.76,X-RAY DIFFRACTION,0.259,0.220,False,True,IGHV3,IGLV1,Lambda,,,,,,7u2d_H_L_A,False
9jie,H,L,0,A,protein,,pro-secreted protein orf2,VIRAL PROTEIN/IMMUNE SYSTEM,07/23/25,Rat hepatitis E virus capsid protein E2s domain in complex with Fab C6,Homo sapiens; Rocahepevirus ratti,homo sapiens,homo sapiens,rocahepevirus ratti,"Liu, L., Zheng, Q., Li, S.",2.76,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV1,Lambda,,,,,,9jie_H_L_A,False
6ncp,C,D,0,E,peptide,,hiv-1 fusion peptide (residues 512-520),IMMUNE SYSTEM,12/11/18,Crystal structure of HIV-1 broadly neutralizing antibody ACS202,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,synthetic construct,"Yuan, M., Wilson, I.A.",2.76,X-RAY DIFFRACTION,0.256,0.222,False,True,IGHV3,IGKV1,Kappa,,,,,,6ncp_C_D_E,False
6nnf,U,V,0,G,protein,,envelope glycoprotein gp120,IMMUNE SYSTEM,01/14/19,Crystal Structure of HIV-1 BG505 SOSIP.664 Prefusion Env Trimer Bound to VRC01 FR3-03 scFv in Complex with Crystallization Chaperones 3H109L Fab and 35O22 scFv at 3.5 Angstrom,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Lai, Y.-T., Kwong, P.D.",2.762,X-RAY DIFFRACTION,0.298,0.242,False,True,unknown,unknown,unknown,,,,,,6nnf_U_V_G,False
6pis,H,L,0,B,protein,,potassium channel subfamily k member 4,"ION TRANSPORT, MEMBRANE PROTEIN",06/27/19,Mouse two pore domain K+ channel TRAAK (K2P4.1) - Fab complex structure,MUS MUSCULUS; CRICETULUS MIGRATORIUS,cricetulus migratorius,cricetulus migratorius,mus musculus,"Brohawn, S.G.",2.77,X-RAY DIFFRACTION,0.286,0.248,False,False,IGHV3,IGKV22,Kappa,,,,,,6pis_H_L_B,False
8eoo,E,J,0,D,protein,,spike protein s1,VIRAL PROTEIN,06/14/23,Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing human antibodies WRAIR-2063 and WRAIR-2151,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Jensen, J.L., Sankhala, R.S., Joyce, M.G.",2.77,X-RAY DIFFRACTION,0.255,0.194,False,False,IGHV3,IGKV2,Kappa,,,,,,8eoo_E_J_D,False
8eoo,F,K,0,D,protein,,spike protein s1,VIRAL PROTEIN,06/14/23,Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing human antibodies WRAIR-2063 and WRAIR-2151,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Jensen, J.L., Sankhala, R.S., Joyce, M.G.",2.77,X-RAY DIFFRACTION,0.255,0.194,False,False,IGHV4,IGLV6,Lambda,,,,,,8eoo_F_K_D,False
4lmq,E,I,0,F,protein,,stromal cell-derived factor 1,cell adhesion/immune system,07/10/13,Development and Preclinical Characterization of a Humanized Antibody Targeting CXCL12,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Zhong, Z., Wang, J., Li, B., Xiang, H., Ultsch, M., Coons, M., Wong, T, Chiang, N.Y., Clark, S., Clark, R., Quintana, L., Gribling, P., Suto, E., Barck, K., Corpuz, R., Yao, J., Takkar, R., Lee, W.P., Damico-Beyer, L.A., Carano, R.D., Adams, C., Kelley, R.F., Wang, W., Ferrara, N.",2.773,X-RAY DIFFRACTION,0.301,0.253,False,True,IGHV3,IGKV1,Kappa,9.229999999999999e-10,-12.32567017838922,BLI,,TBD,4lmq_E_I_F,False
4lmq,H,L,0,D,protein,,stromal cell-derived factor 1,cell adhesion/immune system,07/10/13,Development and Preclinical Characterization of a Humanized Antibody Targeting CXCL12,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Zhong, Z., Wang, J., Li, B., Xiang, H., Ultsch, M., Coons, M., Wong, T, Chiang, N.Y., Clark, S., Clark, R., Quintana, L., Gribling, P., Suto, E., Barck, K., Corpuz, R., Yao, J., Takkar, R., Lee, W.P., Damico-Beyer, L.A., Carano, R.D., Adams, C., Kelley, R.F., Wang, W., Ferrara, N.",2.773,X-RAY DIFFRACTION,0.301,0.253,False,True,IGHV3,IGKV1,Kappa,9.229999999999999e-10,-12.32567017838922,BLI,,TBD,4lmq_H_L_D,False
6lyn,H,L,0,D,protein,,cell surface glycoprotein muc18,CELL ADHESION,02/14/20,CD146 D4-D5/AA98 Fab,MUS MUSCULUS; HOMO SAPIENS,mus musculus,mus musculus,homo sapiens,"Chen, X., Yan, X.",2.776,X-RAY DIFFRACTION,0.262,0.217,False,True,IGHV1,IGKV3,Kappa,,,,,,6lyn_H_L_D,False
7e7x,M,N,0,B,protein,,spike protein s1,VIRAL PROTEIN,02/28/21,SARS-CoV-2 Spike Protein N terminal domain in Complex with N11 Fab,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhang, Z., Shuo, D., Xiao, J.",2.78,X-RAY DIFFRACTION,0.279,0.248,False,True,IGHV1,IGLV2,Lambda,,,,,,7e7x_M_N_B,False
8s72,H,L,0,A,protein,,short neurotoxin 1,ANTITOXIN,09/10/25,Crystal structure of neutralizing Fab Eq4.Dp46-3D from equine antivenom bound to a consensus short chain three finger alpha-neurotoxin.,Equus caballus; synthetic construct,equus caballus,equus caballus,synthetic construct,"Ayres, F., Wibmer, C.K.",2.78,X-RAY DIFFRACTION,0.250,0.228,False,True,unknown,unknown,unknown,,,,,,8s72_H_L_A,False
6ewb,H,L,0,B,protein,,vp1,VIRAL PROTEIN,11/03/17,Crystal structure of GII.4 UNSW 2012 P domain in complex with Fab 10E9,NOROVIRUS HU/GII.4/SYDNEY/NSW0514/2012/AU; MUS MUSCULUS,mus musculus,mus musculus,norovirus hu/gii.4/sydney/nsw0514/2012/au,"Koromyslova, A.D., Hansman, G.S.",2.78,X-RAY DIFFRACTION,0.222,0.186,False,True,IGHV1,IGKV4,Kappa,,,,,,6ewb_H_L_B,False
6cyf,F,E,0,B,protein,,type iii secretion system protein,IMMUNE SYSTEM,04/05/18,PcrV fragment with bound Fab,PSEUDOMONAS AERUGINOSA; HOMO SAPIENS,homo sapiens,homo sapiens,pseudomonas aeruginosa,"Oganesyan, V.",2.78,X-RAY DIFFRACTION,0.249,0.215,False,True,IGHV3,IGKV1,Kappa,,,,,,6cyf_F_E_B,False
9hco,H,L,0,A,protein,,sodium-dependent serotonin transporter,MEMBRANE PROTEIN,09/17/25,Outward-open structure of human serotonin transporter bound to vilazodone,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Kalenderoglou, I.E., Tillmann, P., Loland, C.J.",2.78,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,9hco_H_L_A,False
6hxw,H,L,0,A,protein,,5'-nucleotidase,IMMUNE SYSTEM,10/18/18,structure of human CD73 in complex with antibody IPH53,HOMO SAPIENS; SYNTHETIC CONSTRUCT,synthetic construct,synthetic construct,homo sapiens,"Roussel, A., Amigues, B.",2.78,X-RAY DIFFRACTION,0.232,0.192,False,True,IGHV1,IGKV1,Kappa,,,,,,6hxw_H_L_A,False
1oaz,J,N,0,B,protein,,thioredoxin 1,IMMUNE SYSTEM,01/21/03,IgE Fv SPE7 complexed with a recombinant thioredoxin,RATTUS RATTUS; ESCHERICHIA COLI,rattus rattus,rattus rattus,escherichia coli,"James, L.C., Roversi, P., Tawfik, D.",2.78,X-RAY DIFFRACTION,0.276,0.208,False,True,IGHV1,IGLV1,Lambda,,,,,,1oaz_J_N_B,False
7xw6,Y,L,0,R,protein,,thyrotropin receptor,MEMBRANE PROTEIN,08/17/22,TSHR-Gs-M22 antibody-ML109 complex,Homo sapiens; Mus musculus,homo sapiens,mus musculus,homo sapiens,"Duan, J., Xu, P., Luan, X., Ji, Y., Yuan, Q., He, X., Ye, J., Cheng, X., Jiang, H., Zhang, S., Jiang, Y., Xu, H.E.",2.78,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGLV1,Lambda,,,,,,7xw6_Y_L_R,False
9l2k,H,L,0,A,protein,,envelopment polyprotein,VIRAL PROTEIN/IMMUNE SYSTEM,06/18/25,The crystal structure of SFTSV Gn and SD22 antibody complex,Homo sapiens; Severe fever with thrombocytopenia syndrome virus,homo sapiens,homo sapiens,severe fever with thrombocytopenia syndromevirus ,"Shi, W.F., Quan, C.S., Qi, J.X.",2.78,X-RAY DIFFRACTION,0.312,0.304,False,True,IGHV3,IGKV1,Kappa,,,,,,9l2k_H_L_A,False
8ez8,H,L,0,A,protein,,neuraminidase,Hydrolase/Immune System,11/08/23,Structure of 3C08 Fab in complex with A/Moscow/10/1999 (H3N2) influenza virus neuraminidase,Homo sapiens; Influenza A virus (A/Moscow/10/1999(H3N2)),homo sapiens,homo sapiens,influenza a virus (a/moscow/10/1999(h3n2)),"Mou, Z., Lei, R., Wu, N.C., Dai, X.",2.78,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGLV1,Lambda,,,,,,8ez8_H_L_A,False
8keo,I,H,0,C,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,08/14/24,Structure of SARS-CoV-2 Omicron BA.1 Spike complexed with antibody PW5-570,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Sun, L., Mao, Q., Wang, Y.",2.78,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,8keo_I_H_C,False
6umx,H,L,0,A,protein,,growth/differentiation factor 8,SIGNALING PROTEIN/IMMUNE SYSTEM,10/10/19,Structural basis for specific inhibition of extracellular activation of pro/latent myostatin by SRK-015,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Dagbay, K.B., Treece, E., Streich Jr., F.C., Jackson, J.W., Faucette, R.R., Nikiforov, A., Lin, S.C., Bostion, C.J., Nicholls, S.B., Capili, A.D., Carven, G.J.",2.79,X-RAY DIFFRACTION,0.264,0.217,False,True,IGHV3,IGLV1,Lambda,,,,,,6umx_H_L_A,False
8gpu,H,L,0,A,protein,,envelope protein,ANTIVIRAL PROTEIN,01/08/09,YFV_E_YD6Fab_prefusion,Homo sapiens; Yellow fever virus,homo sapiens,homo sapiens,yellow fever virus,"Li, Y., Wu, L., Qi, J., Yan, J., Gao, G.F.",2.79,X-RAY DIFFRACTION,0.279,0.244,False,True,IGHV3,IGLV2,Lambda,,,,,,8gpu_H_L_A,False
6wit,H,L,0,I,protein,,16055 v1v2 1fd6 scaffold,ANTIVIRAL PROTEIN/IMMUNE SYSTEM,04/10/20,Crystal structure of NHP D15.SD7 Fab in complex with 16055 V1V2 1FD6 scaffold,MACACA MULATTA; HOMO SAPIENS,macaca mulatta,macaca mulatta,homo sapiens,"Liban, T., Aljedani, S., Rodarte, J., Pancera, M.",2.79,X-RAY DIFFRACTION,0.284,0.224,False,True,IGHV1,IGLV6,Lambda,,,,,,6wit_H_L_I,False
9oas,J,K,0,M,protein,,germline-targeting hiv-1 gp120 engineered outer domain eod-gt8-mingly-n276 ,IMMUNE SYSTEM,06/25/25,Crystal structure of antibody Fab G001-14 from IAVI G001 human trial in complex with a germline-targeting gp120 engineered outer domain eOD-GT8-mingly-N276,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Lin, X., Wilson, I.A.",2.79,X-RAY DIFFRACTION,0.255,0.214,False,True,IGHV1,IGKV1,Kappa,,,,,,9oas_J_K_M,False
5vqm,H,L,0,A,protein,,toxin b,TOXIN/IMMUNE SYSTEM,05/09/17,Clostridium difficile TcdB-GTD bound to PA41 Fab,PEPTOCLOSTRIDIUM DIFFICILE; HOMO SAPIENS,homo sapiens,homo sapiens,peptoclostridium difficile,"Kroh, H.K., Spiller, B.W., Lacy, D.B.",2.79,X-RAY DIFFRACTION,0.292,0.241,False,True,IGHV1,IGKV3,Kappa,,,,,,5vqm_H_L_A,False
5w6g,H,L,0,A,protein,,hemagglutinin ha1,VIRAL PROTEIN/IMMUNE SYSTEM,06/16/17,Human antibody 6649 in complex with influenza hemagglutinin H1 Solomon Islands,INFLUENZA A VIRUS (A/SOLOMON ISLANDS/3/2006(H1N1)); HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus (a/solomonislands/3/2006(h1n1)) ,"Raymond, D.D., Harrison, S.C.",2.79,X-RAY DIFFRACTION,0.253,0.218,False,True,IGHV4,IGLV1,Lambda,2.12e-06,-7.740262767026869,BLI,,TBD,5w6g_H_L_A,False
8wej,H,L,0,B,protein,,cytochrome b-245 heavy chain,OXIDOREDUCTASE,01/24/24,Structure of human phagocyte NADPH oxidase in the activated state,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Chen, L., Liu, X.",2.79,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV10,Kappa,,,,,,8wej_H_L_B,False
6rps,N,M,0,B,protein,,carbonic anhydrase 12,LYASE,05/14/19,X-ray crystal structure of carbonic anhydrase XII complexed with a theranostic monoclonal antibody fragment,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Alterio, V., Esposito, D., De Simone, G.",2.79,X-RAY DIFFRACTION,0.231,0.203,False,True,IGHV2,IGKV5,Kappa,,,,,,6rps_N_M_B,False
8ja5,B,C,0,D,protein,,glycoprotein g,VIRAL PROTEIN/IMMUNE SYSTEM,05/08/24,Crystal structure of Nipah Virus attachment (G) glycoprotein in complex with neutralizing antibody 14F8,Mus musculus; Nipah henipavirus,mus musculus,mus musculus,nipah henipavirus,"Li, Y.H., Huang, X.Y., Xu, J.J., Chen, W.",2.79,X-RAY DIFFRACTION,0.245,0.217,False,True,IGHV2,IGKV1,Kappa,,,,,,8ja5_B_C_D,False
8rpb,H,L,0,P,protein,,programmed cell death 1 ligand 1,IMMUNE SYSTEM,06/19/24,Structure of S79 Fab in complex with IgV domain of human PD-L1,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Svensson, A., Kelpsas, V., Laursen, M., Rose, N.",2.794,X-RAY DIFFRACTION,0.251,0.229,False,True,IGHV3,IGLV2,Lambda,,,,,,8rpb_H_L_P,False
6bkb,H,L,0,E,protein,,polyprotein,IMMUNE SYSTEM,11/08/17,Structure of Hepatitis C Virus Envelope Glycoprotein E2 core from genotype 6a bound to broadly neutralizing antibody AR3A,HOMO SAPIENS; RECOMBINANT HEPATITIS C VIRUS HK6A/JFH-1,homo sapiens,homo sapiens,recombinant hepatitis c virus hk6a/jfh-1,"Tzarum, N., Wilson, I.A., Law, M.",2.799,X-RAY DIFFRACTION,0.267,0.230,False,True,IGHV1,IGKV3,Kappa,1.5e-09,-12.037965345328766,BLI,,TBD,6bkb_H_L_E,False
8tp7,H,L,0,C,protein,,hemagglutinin,VIRAL PROTEIN/Immune System,10/11/23,H2 hemagglutinin (A/Singapore/1/1957) in complex with Sa-targeting Fab 4-1-1G03,Homo sapiens; Influenza A virus (A/Singapore/1/1957(H2N2)),homo sapiens,homo sapiens,influenza a virus (a/singapore/1/1957(h2n2)),"Yang, Y.R., Han, J., Perrett, H.R., Ward, A.B.",2.8,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGLV2,Lambda,,,,,,8tp7_H_L_C,False
9vhz,A,B,0,Q,protein,,entry-fusion complex associated protein opg095,VIRAL PROTEIN/IMMUNE SYSTEM,10/01/25,Structure of MPXV M1R and hmMM1-40 Fab complex,Monkeypox virus; Mus musculus,mus musculus,mus musculus,monkeypox virus,"Zhao, R.C., Zhang, Y., Wu, L.L., Wang, Q.H.",2.8,X-RAY DIFFRACTION,0.296,0.208,False,True,IGHV1,IGKV2,Kappa,,,,,,9vhz_A_B_Q,False
6wn4,H,L,0,D,peptide,,lipoprotein lipase peptide,IMMUNE SYSTEM,04/22/20,Structural basis for the binding of monoclonal antibody 5D2 to the tryptophan-rich lipid-binding loop in lipoprotein lipase,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Luz, J.G., Birrane, G., Young, S.G., Meiyappan, M., Ploug, M.",2.8,X-RAY DIFFRACTION,0.243,0.208,False,False,IGHV1,IGKV4,Kappa,,,,,,6wn4_H_L_D,False
3u9p,K,M,0,C,protein,,neutrophil gelatinase-associated lipocalin,IMMUNE SYSTEM,10/19/11,Crystal Structure of Murine Siderocalin in Complex with an Fab Fragment,MUS MUSCULUS; RATTUS NORVEGICUS,rattus norvegicus,rattus norvegicus,mus musculus,"Correnti, C., Strong, R.K.",2.8,X-RAY DIFFRACTION,0.292,0.219,False,True,IGHV2,IGKV19,Kappa,,,,,,3u9p_K_M_C,False
7pc2,I,J,0,B,protein,,"gp120, bg505 sosip.664 t332n",VIRAL PROTEIN,08/03/21,HIV-1 Env (BG505 SOSIP.664) in complex with the IgA bNAb 7-269 and the antibody 3BNC117.,HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS,homo sapiens,homo sapiens,human immunodeficiency virus,"Fernandez, I., Bontems, F., Pehau-Arnaudet, G., Rey, F.",2.8,ELECTRON MICROSCOPY,,,False,True,unknown,IGKV1,Kappa,,,,,,7pc2_I_J_B,False
5kn5,D,E,0,F,peptide,,protransforming growth factor alpha,IMMUNE SYSTEM,06/27/16,TGFalpha/Epiregulin complex with neutralizing antibody LY3016859,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,homo sapiens,"Atwell, S., Boyles, J.S., Clawson, D.K., Druzina, Z., Josef, G.H., Weichert, K., Witcher, D.R.",2.8,X-RAY DIFFRACTION,0.263,0.206,False,True,IGHV1,IGKV4,Kappa,1.02e-10,-13.630708160608432,Unknown,,TBD,5kn5_D_E_F,False
6lz9,H,L,0,B,protein,,hepatocyte growth factor,IMMUNE SYSTEM,02/18/20,t8E4 antibody Fab complexed with the active form of HGF,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Kitago, Y., Umitsu, M., Takagi, J.",2.8,X-RAY DIFFRACTION,0.298,0.248,False,True,IGHV2,IGKV10,Kappa,,,,,,6lz9_H_L_B,False
7wwm,I,M,0,B,protein,,spike glycoprotein,VIRAL PROTEIN,02/13/22,S protein of Delta variant in complex with ZWC6,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Guo, Y.Y., Zhang, Y.Y., Zhou, Q.",2.8,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV3,Kappa,,,,,,7wwm_I_M_B,False
1r0a,H,L,0,B,protein,,reverse transcriptase,Transferase/immune system/DNA,09/19/03,Crystal structure of HIV-1 reverse transcriptase covalently tethered to DNA template-primer solved to 2.8 angstroms,HUMAN IMMUNODEFICIENCY VIRUS 1; MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,human immunodeficiency virus 1,"Tuske, S., Ding, J., Arnold, E.",2.8,X-RAY DIFFRACTION,0.272,0.239,False,False,IGHV8,IGKV10,Kappa,,,,,,1r0a_H_L_B,False
6v4o,A,B,0,I,protein,,neuraminidase,VIRAL PROTEIN,11/28/19,Structure of human 2E01 Fab in complex with influenza virus neuraminidase from B/Phuket/3073/2013,INFLUENZA B VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,influenza b virus,"Dai, Y.N., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID)",2.8,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,6v4o_A_B_I,False
1mhp,X,Y,0,B,protein,,"integrin alpha 1, (residues 169-360)",IMMUNE SYSTEM,08/20/02,Crystal structure of a chimeric alpha1 integrin I-domain in complex with the Fab fragment of a humanized neutralizing antibody,RATTUS NORVEGICUS; MUS MUSCULUS,mus musculus,mus musculus,rattus norvegicus,"Karpusas, M., Taylor, F., Ferrant, J., Weinreb, P., Garber, E.",2.8,X-RAY DIFFRACTION,0.272,0.213,False,True,IGHV3,IGKV1D,Kappa,,,,,,1mhp_X_Y_B,True
6vn1,H,L,0,A,protein,,envelope glycoprotein b,VIRAL PROTEIN/IMMUNE SYSTEM,01/29/20,A 2.8 Angstrom Cryo-EM Structure of a Glycoprotein B-Neutralizing Antibody Complex Reveals a Critical Domain for Herpesvirus Fusion Initiation,HOMO SAPIENS; HUMAN ALPHAHERPESVIRUS 3,homo sapiens,homo sapiens,human alphaherpesvirus 3,"Oliver, S.L.",2.8,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,6vn1_H_L_A,False
7czx,J,N,0,C,protein,,spike glycoprotein,VIRAL PROTEIN,09/09/20,S protein of SARS-CoV-2 in complex bound with P5A-1B9,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Yan, R.H., Zhang, Y.Y., Li, Y.N., Zhou, Q.",2.8,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV4,Kappa,,,,,,7czx_J_N_C,False
7np1,J,N,0,C,protein,,spike protein s1,VIRAL PROTEIN,02/26/21,Crystal Structure of the SARS-CoV-2 Receptor Binding Domain in Complex with Antibody ION-360,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Hall, G., Cowan, R., Carr, M.",2.8,X-RAY DIFFRACTION,0.281,0.232,False,True,IGHV3,IGKV1,Kappa,,,,,,7np1_J_N_C,False
7qf1,C,B,0,A,protein,,spike protein s1,VIRAL PROTEIN,12/03/21,Crystal structure of the SARS-CoV-2 RBD in complex with the human antibody CV2.6264,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Fernandez, I., Pederzoli, R., Rey, F.A.",2.8,X-RAY DIFFRACTION,0.254,0.229,False,True,IGHV1,IGKV1,Kappa,,,,,,7qf1_C_B_A,False
7czw,J,N,0,C,protein,,spike glycoprotein,VIRAL PROTEIN,09/09/20,S protein of SARS-CoV-2 in complex bound with P5A-2G7,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Yan, R.H., Zhang, Y.Y., Li, Y.N., Zhou, Q.",2.8,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGLV2,Lambda,,,,,,7czw_J_N_C,False
8wo4,D,C,0,E,protein,,non-structural protein 1,VIRAL PROTEIN/IMMUNE SYSTEM,05/08/24,ZIKV rsNS1 in complex with Fab EB9 and anti-fab nanobody,Homo sapiens; Lama glama; Zika virus,homo sapiens,homo sapiens,zika virus,"Chew, B.L.A., Luo, D.",2.8,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8wo4_D_C_E,False
8yx9,H,L,0,A,protein,,tumor necrosis factor receptor superfamily member 5,IMMUNE SYSTEM,05/08/24,CD40 in complex with Dacetuzumab Fab,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Caaveiro, J.M.M., Fernandez-Perez, J., Tsumoto, K.",2.8,X-RAY DIFFRACTION,0.262,0.209,False,True,IGHV3,IGKV1,Kappa,,,,,,8yx9_H_L_A,False
5dfv,C,D,0,A,protein,,cd81 antigen,IMMUNE SYSTEM,08/27/15,CRYSTAL STRUCTURE OF HUMAN CD81 LARGE EXTRACELLULAR LOOP IN COMPLEX WITH MURINE FAB FRAGMENT K04,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Harris, S.F., Wong, A., Kuglstatter, A.",2.8,X-RAY DIFFRACTION,0.291,0.239,False,False,IGHV1,IGKV3,Kappa,5e-10,-12.68887519701207,SPR,,TBD,5dfv_C_D_A,False
8tco,F,G,0,C,protein,,envelope glycoprotein o,VIRAL PROTEIN/IMMUNE SYSTEM,08/09/23,HCMV Trimer in complex with CS2it1p2_F7K Fab and CS4tt1p1_E3K Fab,Homo sapiens; Human betaherpesvirus 5,homo sapiens,homo sapiens,human betaherpesvirus 5,"Goldsmith, J.G., McLellan, J.S.",2.8,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,8tco_F_G_C,False
7ki6,H,L,0,A,protein,,fusion glycoprotein f0,VIRAL PROTEIN/IMMUNE SYSTEM,10/23/20,Structure of the HeV F glycoprotein in complex with the 1F5 neutralizing antibody,HENDRA HENIPAVIRUS; MUS MUSCULUS,mus musculus,mus musculus,hendra henipavirus,"Dang, H.V., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler, D.",2.8,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV4,Kappa,,,,,,7ki6_H_L_A,False
8j7e,C,D,0,E,protein,,soluble cytochrome b562,IMMUNE SYSTEM,09/06/23,Crystal structure of BRIL in complex with 1b3 Fab,Escherichia coli; Homo sapiens,homo sapiens,homo sapiens,escherichia coli,"Zhong, Y.X., Guo, Q., Tao, Y.Y.",2.8,X-RAY DIFFRACTION,0.251,0.200,False,True,IGHV3,IGKV1,Kappa,,,,,,8j7e_C_D_E,False
9vnp,C,A,0,L,protein,,interferon gamma,IMMUNE SYSTEM,01/28/26,The complexes of IFN-gamma and A01BM-03 Fab,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Wang, X., Zhang, L., Wang, H., Yu, J.",2.8,X-RAY DIFFRACTION,0.248,0.229,False,True,IGHV3,IGLV6,Lambda,,,,,,9vnp_C_A_L,False
8t7a,H,I,0,c,protein,,unknown,VIRAL PROTEIN/IMMUNE SYSTEM,09/13/23,Cryo-EM structure of RSV preF in complex with Fab 2.4K,Homo sapiens; Respiratory syncytial virus,homo sapiens,homo sapiens,respiratory syncytial virus,"McCool, R.S., McLellan, J.S.",2.8,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV4,Kappa,,,,,,8t7a_H_I_c,False
8tq7,F,G,0,C,protein,,"h-2 class i histocompatibility antigen, d-d alpha chain",IMMUNE SYSTEM,03/20/24,Crystal structure of Fab.34.2.12 in complex with MHC-I (H2-Dd),Mus musculus; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,mus musculus,"Jiang, J., Boyd, L.F., Natarajan, K., Margulies, D.H.",2.8,X-RAY DIFFRACTION,0.271,0.225,False,True,IGHV1,IGKV6,Kappa,,,,,,8tq7_F_G_C,False
7czq,J,N,0,C,protein,,spike glycoprotein,VIRAL PROTEIN,09/09/20,S protein of SARS-CoV-2 in complex bound with P2B-1A10,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Yan, R.H., Zhang, Y.Y., Li, Y.N., Zhou, Q.",2.8,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7czq_J_N_C,False
1ai1,H,L,0,P,peptide,,aib142,COMPLEX (ANTIBODY/PEPTIDE),11/06/96,HIV-1 V3 LOOP MIMIC,MUS MUSCULUS,mus musculus,mus musculus,,"Ghiara, J.B., Wilson, I.A.",2.8,X-RAY DIFFRACTION,unknown,0.220,False,False,IGHV12,IGKV3,Kappa,,,,,,1ai1_H_L_P,False
7uap,M,N,0,B,protein,,spike glycoprotein,VIRAL PROTEIN,03/13/22,"Structure of the SARS-CoV-2 S 6P trimer in complex with the neutralizing antibody Fab fragment, C1520",SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Barnes, C.O.",2.8,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV4,Lambda,,,,,,7uap_M_N_B,False
2qsc,H,L,0,P,peptide,,envelope glycoprotein gp120,immune system,07/30/07,Crystal structure analysis of anti-HIV-1 V3-Fab F425-B4e8 in complex with a V3-peptide,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,,"Bell, C.H., Schiefner, A., Stanfield, R.L., Wilson, I.A.",2.8,X-RAY DIFFRACTION,0.264,0.219,False,True,IGHV3,IGKV1,Kappa,,,,,,2qsc_H_L_P,False
5xmh,D,C,0,B,protein,,immunoglobulin gamma-1 heavy chain,IMMUNE SYSTEM,05/15/17,Crystal structure of an IgM rheumatoid factor YES8c in complex with IgG1 Fc,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Shiroishi, M., Shimokawa, K., Lee, J.M., Kusakabe, M., Ueda, T.",2.8,X-RAY DIFFRACTION,0.272,0.220,False,True,IGHV1,IGKV3,Kappa,0.0001599999999999,-5.178506877772148,SPR,,TBD,5xmh_D_C_B,False
3cxd,H,L,0,P,peptide,,a peptide from osteopontin,IMMUNE SYSTEM,04/24/08,Crystal structure of anti-osteopontin antibody 23C3 in complex with its epitope peptide,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,,"Du, J., Yang, H., Zhong, C., Ding, J.",2.8,X-RAY DIFFRACTION,0.292,0.248,False,False,IGHV10,IGKV12,Kappa,,,,,,3cxd_H_L_P,False
6mhr,D,E,0,F,protein,,tumor necrosis factor receptor superfamily member 9,IMMUNE SYSTEM,09/18/18,Structure of the human 4-1BB / Urelumab Fab complex,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Kimberlin, C.R., Chin, S.M., Roe-Zurz, Z., Xu, A., Yang, Y.",2.8,X-RAY DIFFRACTION,0.222,0.200,False,True,IGHV4,IGKV3,Kappa,2.2000000000000002e-08,-10.446804596890326,SPR,,TBD,6mhr_D_E_F,False
3eoa,B,A,0,J,protein,,integrin alpha-l,IMMUNE SYSTEM/CELL ADHESION,09/26/08,"Crystal structure the Fab fragment of Efalizumab in complex with LFA-1 I domain, Form I",HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Li, S., Ding, J.",2.8,X-RAY DIFFRACTION,0.264,0.225,False,True,IGHV3,IGKV1,Kappa,2.2e-09,-11.8,SPR,25.0,19258452,3eoa_B_A_J,False
7e5o,H,L,0,A,protein,,spike protein s1,VIRAL PROTEIN,02/19/21,Crystal structure of SARS-CoV-2 RBD in complex with antibody NT-193,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Kita, S., Onodera, T., Adachi, Y., Moriayma, S., Nomura, T., Tadokoro, T., Anraku, Y., Yumoto, K., Tian, C., Fukuhara, H., Suzuki, T., Tonouchi, K., Sasaki, J., Sun, L., Hashiguchi, T., Takahashi, Y., Maenaka, K.",2.8,X-RAY DIFFRACTION,0.256,0.226,False,True,IGHV4,IGKV1,Kappa,,,,,,7e5o_H_L_A,False
6mej,A,B,0,C,protein,,e2 glycoprotein,IMMUNE SYSTEM,09/06/18,Broadly neutralizing antibodies against HCV use a CDRH3 disulfide motif to recognize an E2 glycoprotein site that can be targeted for vaccine design,HOMO SAPIENS; HEPACIVIRUS C,homo sapiens,homo sapiens,hepacivirus c,"Flyak, A.I., Bjorkman, P.J.",2.8,X-RAY DIFFRACTION,0.271,0.198,False,True,IGHV1,IGLV1,Lambda,,,,,,6mej_A_B_C,False
6qig,H,L,0,A,protein,,a disintegrin and metalloproteinase with thrombospondinmotifs 13 ,BLOOD CLOTTING,01/18/19,Metalloproteinase,HOMO SAPIENS; RATTUS NORVEGICUS,rattus norvegicus,rattus norvegicus,homo sapiens,"Kim, H.J., Emsley, J.",2.8,X-RAY DIFFRACTION,0.247,0.206,False,False,IGHV5,IGKV5,Kappa,,,,,,6qig_H_L_A,False
8jqn,h,l,0,a,protein,,unknown,VIRAL PROTEIN/IMMUNE SYSTEM,12/11/24,CryoEM structure of sNS1 complexed with Fab 2E11,Homo sapiens; Zika virus,homo sapiens,homo sapiens,zika virus,"Chen, Q., Qi, P.",2.8,ELECTRON MICROSCOPY,,,False,False,IGHV3,IGLV3,Lambda,,,,,,8jqn_h_l_a,False
8jqm,M,N,0,B,protein,,non-structural protein 1,VIRAL PROTEIN/IMMUNE SYSTEM,12/18/24,CryoEM structure of sNS1 complexed with Fab 4F10,Homo sapiens; Zika virus,homo sapiens,homo sapiens,zika virus,"Chen, Q., Qi, P.",2.8,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV1,Kappa,,,,,,8jqm_M_N_B,False
7wn8,H,L,0,A,protein,,leukocyte surface antigen cd47,ANTITUMOR PROTEIN,01/25/23,Crystal structure of antibody (BC31M5) binds to CD47,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Li, Y., Wang, W., Sui, J., Zhang, S.",2.8,X-RAY DIFFRACTION,0.276,0.243,False,True,IGHV1,IGKV3,Kappa,,,,,,7wn8_H_L_A,False
1nfd,H,G,0,D,protein,,n15 alpha-beta t-cell receptor,COMPLEX (IMMUNORECEPTOR/IMMUNOGLOBULIN),08/04/97,AN ALPHA-BETA T CELL RECEPTOR (TCR) HETERODIMER IN COMPLEX WITH AN ANTI-TCR FAB FRAGMENT DERIVED FROM A MITOGENIC ANTIBODY,MUS MUSCULUS,mus musculus,mus musculus,mus musculus,"Wang, J.-H., Lim, K., Smolyar, A., Teng, M.-K., Sacchittini, J., Reinherz, E.L.",2.8,X-RAY DIFFRACTION,0.309,0.243,False,True,IGHV6,IGKV10,Kappa,,,,,,1nfd_H_G_D,False
6yax,H,L,0,A,protein,,unknown,IMMUNE SYSTEM,03/14/20,Crystal structure of CD32b (Fc Gamma Receptor IIb) in complex with Human IgG1 Fab fragment (5C05),HOMO SAPIENS,,,,"Fisher, H., Tews, I., Orr, C.",2.8,X-RAY DIFFRACTION,0.264,0.230,False,False,IGHV3,IGLV1,Lambda,,,,,,6yax_H_L_A,False
6xcj,H,L,0,G,protein,,envelope glycoprotein gp120,VIRAL PROTEIN/IMMUNE SYSTEM,06/08/20,Crystal Structure of DH650 Fab from a Rhesus Macaque in Complex with HIV-1 gp120 Core,HUMAN IMMUNODEFICIENCY VIRUS 1; MACACA MULATTA,macaca mulatta,macaca mulatta,human immunodeficiency virus 1,"Raymond, D.D., Chug, H., Harrison, S.C.",2.8,X-RAY DIFFRACTION,0.284,0.227,False,True,IGHV1,IGKV2,Kappa,,,,,,6xcj_H_L_G,False
2r56,H,L,0,A,protein,,beta-lactoglobulin,IMMUNE SYSTEM,09/03/07,Crystal Structure of a Recombinant IgE Fab Fragment in Complex with Bovine Beta-Lactoglobulin Allergen,BOS TAURUS; HOMO SAPIENS,homo sapiens,homo sapiens,bos taurus,"Niemi, M., Kallio, J.M., Hakulinen, N., Rouvinen, J.",2.8,X-RAY DIFFRACTION,0.291,0.246,False,False,IGHV3,IGKV1,Kappa,1.3e-09,-12.12,SPR,,17997967,2r56_H_L_A,False
8yvn,E,I,0,D,protein,,neuraminidase,VIRAL PROTEIN/IMMUNE SYSTEM,07/02/25,Neuraminidase of A/Switzerland/9715293/2013 H3N2 in complex with CAV-F6 Fab,Homo sapiens; Influenza A virus,homo sapiens,homo sapiens,influenza a virus,"Wang, X., Ge, J., Li, X.",2.8,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV3,Kappa,,,,,,8yvn_E_I_D,False
7pc2,M,N,0,C,protein,,"gp120, bg505 sosip.664 t332n",VIRAL PROTEIN,08/03/21,HIV-1 Env (BG505 SOSIP.664) in complex with the IgA bNAb 7-269 and the antibody 3BNC117.,HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS,homo sapiens,homo sapiens,human immunodeficiency virus,"Fernandez, I., Bontems, F., Pehau-Arnaudet, G., Rey, F.",2.8,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV3,Kappa,,,,,,7pc2_M_N_C,False
1ggi,J,M,0,Q,peptide,,hiv-1 v3 loop peptide antigen,IMMUNOGLOBULIN,04/02/93,CRYSTAL STRUCTURE OF AN HIV-1 NEUTRALIZING ANTIBODY 50.1 IN COMPLEX WITH ITS V3 LOOP PEPTIDE ANTIGEN,MUS MUSCULUS,,mus musculus,,"Stanfield, R.L., Rini, J.M., Wilson, I.A.",2.8,X-RAY DIFFRACTION,unknown,0.188,False,True,IGHV8,IGKV3,Kappa,,,,,,1ggi_J_M_Q,False
7s0x,C,D,0,F,protein,,circumsporozoite protein,IMMUNE SYSTEM,08/31/21,Fab352 in complex with the C-terminal alphaTSR domain of P. falciparum,HOMO SAPIENS; PLASMODIUM FALCIPARUM (ISOLATE 3D7),homo sapiens,homo sapiens,plasmodium falciparum (isolate 3d7),"Pholcharee, T., Oyen, D., Wilson, I.A.",2.8,X-RAY DIFFRACTION,0.276,0.225,False,True,IGHV3,IGLV3,Lambda,,,,,,7s0x_C_D_F,False
7v5k,E,D,0,A,protein,,spike glycoprotein,PROTEIN BINDING,08/24/22,MERS S ectodomain trimer in complex with neutralizing antibody 0722 (state 1),Homo sapiens; Human betacoronavirus 2c EMC/2012,homo sapiens,homo sapiens,human betacoronavirus 2c emc/2012,"Wang, X., Zhao, J., Wang, Z., Zeng, J., Zhang, S., Wang, Y.",2.8,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,7v5k_E_D_A,False
5vta,I,G,0,B,protein,,dipeptidyl peptidase 4,HYDROLASE,05/16/17,Co-Crystal Structure of DPPIV with a Chemibody Inhibitor,RATTUS NORVEGICUS; MUS MUSCULUS,mus musculus,mus musculus,rattus norvegicus,"Wang, Z., Johnstone, S., Cheng, A.",2.8,X-RAY DIFFRACTION,0.300,0.250,False,True,IGHV1,IGKV4,Kappa,,,,,,5vta_I_G_B,False
2y6s,D,C,0,P,peptide,,envelope glycoprotein,IMMUNE SYSTEM/VIRAL PROTEIN,01/25/11,Structure of an Ebolavirus-protective antibody in complex with its  mucin-domain linear epitope,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,zaire ebolavirus,"Olal, D.O., Kuehne, A., Lee, J.E., Bale, S., Dye, J.M., Saphire, E.O.",2.8,X-RAY DIFFRACTION,0.2873,0.2359,False,False,IGHV1,IGKV3,Kappa,1.0300000000000001e-07,-9.532195517943316,Unknown,,TBD,2y6s_D_C_P,False
3lzf,H,L,0,A,protein,,"hemagglutinin, ha1 subunit",VIRAL PROTEIN/IMMUNE SYSTEM,03/01/10,Crystal Structure of Fab 2D1 in Complex with the 1918 Influenza Virus Hemagglutinin,INFLUENZA A VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus,"Ekiert, D.C., Wilson, I.A.",2.8,X-RAY DIFFRACTION,0.259,0.230,False,True,IGHV2,IGLV1,Lambda,,,,,,3lzf_H_L_A,True
4qnp,H,L,0,B,protein,,neuraminidase,HYDROLASE/IMMUNE SYSTEM,06/18/14,Crystal structure of the 2009 pandemic H1N1 influenza virus neuraminidase with a neutralizing antibody,INFLUENZA A VIRUS; MUS MUSCULUS,mus musculus,mus musculus,influenza a virus,"Wan, H.Q., Yang, H., Shore, D.A., Garten, R.J., Couzens, L., Gao, J., Jiang, L.L., Carney, P.J., Villanueva, J., Stevens, J., Eichelberger, M.C.",2.8,X-RAY DIFFRACTION,0.224,0.181,False,True,IGHV10,IGKV4,Kappa,,,,,,4qnp_H_L_B,False
9dwe,J,N,0,A,protein,,hemagglutinin,VIRAL PROTEIN/IMMUNE SYSTEM,12/04/24,Cryo-EM structure of hemagglutinin H5 A/Texas/37/2024 in complex with LSTa and antibody CR9114,Homo sapiens; Influenza A virus,homo sapiens,homo sapiens,influenza a virus,"Fernandez-Quintero, M.L., Han, J., Rodriguez, A.J., Ward, A.B.",2.8,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV1,Lambda,,,,,,9dwe_J_N_A,False
7m3i,H,L,0,R,protein,,spike protein s1,IMMUNE SYSTEM/VIRAL PROTEIN,03/18/21,"Structure of SARS-CoV-2 spike protein receptor binding domain in complex with a neutralizing antibody, CV2-75 Fab",HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Hurlburt, N.K., Pancera, M.",2.8,X-RAY DIFFRACTION,0.281,0.245,False,True,IGHV4,IGLV3,Lambda,,,,,,7m3i_H_L_R,False
8y3k,K,L,0,C,protein,,envelope protein,VIRUS/IMMUNE SYSTEM,01/29/25,Cryo-EM structure of dengue virus serotype 2 strain D2Y98P-PP1 in complex with human antibody 2D22 Fab at 37 deg C,dengue virus type 2; Homo sapiens,homo sapiens,homo sapiens,dengue virus type 2,"Fibriansah, G., Ng, T.S., Lim, X.N., Tan, A.W.K., Shi, J., Lok, S.M.",2.8,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV1,Lambda,,,,,,8y3k_K_L_C,False
7lr3,H,L,0,D,protein,,hapless 2,SURFACTANT PROTEIN/IMMUNE SYSTEM,02/15/21,Complex of Fab 2/6.14 with domain 3 of P. berghei HAP2,MUS MUSCULUS; PLASMODIUM BERGHEI,mus musculus,mus musculus,plasmodium berghei,"Feng, J., Dong, X.C., Lu, X.F., Springer, T.A.",2.8,X-RAY DIFFRACTION,0.292,0.253,False,True,IGHV5,IGKV19,Kappa,,,,,,7lr3_H_L_D,False
9mib,P,R,0,E,protein,,gt1.1 v4.1 sosip gp120,VIRAL PROTEIN,05/21/25,206-9C09 Fab in complex with HIV-1 GT1.1 v4.1 SOSIP Env trimer and RM20A3 Fab,Homo sapiens; Human immunodeficiency virus 1; Macaca mulatta,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Phulera, S., Ozorowski, G., Ward, A.B.",2.8,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,9mib_P_R_E,False
9mib,O,Q,0,D,protein,,envelope glycoprotein gp160,VIRAL PROTEIN,05/21/25,206-9C09 Fab in complex with HIV-1 GT1.1 v4.1 SOSIP Env trimer and RM20A3 Fab,Homo sapiens; Human immunodeficiency virus 1; Macaca mulatta,macaca mulatta,macaca mulatta,human immunodeficiency virus 1,"Phulera, S., Ozorowski, G., Ward, A.B.",2.8,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV2,Lambda,,,,,,9mib_O_Q_D,False
9mi0,P,R,0,E,protein,,gt1.1 v4.1 sosip gp120,VIRAL PROTEIN,05/21/25,61-12A01 Fab in complex with HIV-1 GT1.1 v4.1 SOSIP Env trimer and RM20A3 Fab,Homo sapiens; Human immunodeficiency virus 1; Macaca mulatta,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Phulera, S., Ozorowski, G., Ward, A.B.",2.8,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,9mi0_P_R_E,False
5yy5,C,D,0,B,protein,,mers-cov rbd,VIRAL PROTEIN,12/08/17,Structural definition of a unique neutralization epitope on the receptor-binding domain of MERS-CoV spike glycoprotein,MIDDLE EAST RESPIRATORY SYNDROME CORONAVIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,middle east respiratory syndrome coronavirus,"Zhang, S.Y., Wang, P.F., Zhou, P.P., Wang, X.Q., Zhang, L.Q.",2.8,X-RAY DIFFRACTION,0.279,0.246,False,True,IGHV3,IGLV1,Lambda,,,,,,5yy5_C_D_B,False
7tuf,H,L,0,D,protein,,tapasin,IMMUNE SYSTEM,09/07/22,Crystal structure of Tapasin in complex with PaSta1-Fab,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Jiang, J., Natarajan, K., Taylor, D.K., Boyd, L.F., Margulies, D.H.",2.8,X-RAY DIFFRACTION,0.274,0.231,False,True,IGHV3,IGKV4,Kappa,,,,,,7tuf_H_L_D,False
4lvh,H,I,0,G,protein,,hemagglutinin,IMMUNE SYSTEM,07/26/13,Insight into highly conserved H1 subtype-specific epitopes in influenza virus hemagglutinin,INFLUENZA A VIRUS; MUS MUSCULUS,mus musculus,mus musculus,influenza a virus,"Kim, K.H., Cho, K.J., Kim, S., Seok, J.H., Lee, J.-H.",2.8,X-RAY DIFFRACTION,0.274,0.232,False,False,IGHV5,IGKV3,Kappa,,,,,,4lvh_H_I_G,False
5vta,K,J,0,A,protein,,dipeptidyl peptidase 4,HYDROLASE,05/16/17,Co-Crystal Structure of DPPIV with a Chemibody Inhibitor,RATTUS NORVEGICUS; MUS MUSCULUS,mus musculus,mus musculus,rattus norvegicus,"Wang, Z., Johnstone, S., Cheng, A.",2.8,X-RAY DIFFRACTION,0.300,0.250,False,True,IGHV1,IGKV4,Kappa,,,,,,5vta_K_J_A,False
8dao,A,B,0,J,peptide,,spike protein s2 fusion peptide,IMMUNE SYSTEM,07/27/22,Crystal structure of SARS-CoV-2 spike stem fusion peptide in complex with neutralizing antibody COV44-79,Homo sapiens; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Lin, T.H., Lee, C.C.D., Yuan, M., Wilson, I.A.",2.8,X-RAY DIFFRACTION,0.284,0.231,False,True,IGHV3,IGKV1,Kappa,,,,,,8dao_A_B_J,False
9bj2,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,03/05/25,"Structure of the SARS-CoV-2 S 6P trimer complex with the human neutralizing antibody Fab fragment, C1533 (local refinement of NTD and C1533)",Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Rubio, A.A., Abernathy, M.E., Barnes, C.O.",2.8,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV1,Lambda,,,,,,9bj2_H_L_A,False
9bjh,I,M,0,B,protein,,apical membrane antigen 1,STRUCTURAL PROTEIN,03/12/25,Crystal structure of neutralizing human monoclonal antibody 75C8 in complex with AMA1 DI-DII,Homo sapiens; Plasmodium falciparum 3D7,homo sapiens,homo sapiens,plasmodium falciparum 3d7,"Patel, P.N., Tang, W.K., Tolia, N.H.",2.8,X-RAY DIFFRACTION,0.253,0.211,False,True,IGHV4,IGKV3,Kappa,,,,,,9bjh_I_M_B,False
5ggt,H,L,0,A,protein,,programmed cell death 1 ligand 1,IMMUNE SYSTEM,06/16/16,PD-L1 in complex with BMS-936559 Fab,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,homo sapiens,"Heo, Y.S.",2.8,X-RAY DIFFRACTION,0.269,0.211,False,True,IGHV1,IGKV3,Kappa,,,,,,5ggt_H_L_A,False
4yk4,C,B,0,A,protein,,hemagglutinin,Viral protein/Immune system,03/03/15,Human antibody 641 I-9 in complex with influenza hemagglutinin H1 Solomon Islands/03/2006,HOMO SAPIENS; INFLUENZA A VIRUS,homo sapiens,homo sapiens,influenza a virus,"Schmidt, A.G., Harrison, S.C.",2.8,X-RAY DIFFRACTION,0.260,0.220,False,True,IGHV4,IGKV1,Kappa,3.64e-07,-8.78422937966864,BLI,,TBD,4yk4_C_B_A,False
6pi7,F,E,0,D,protein,,tudor and kh domain-containing protein,PROTEIN BINDING,06/26/19,Crystal structure of the TDRD2 extended Tudor domain in complex with an antibody fragment and the PIWIL1 peptide,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,homo sapiens,"Liu, K., Min, J.R., Structural Genomics Consortium (SGC)",2.8,X-RAY DIFFRACTION,0.206,0.190,False,True,IGHV3,IGKV1,Kappa,,,,,,6pi7_F_E_D,False
1jrh,H,L,0,I,protein,,interferon-gamma receptor alpha chain,COMPLEX (ANTIBODY/ANTIGEN),09/23/97,COMPLEX (ANTIBODY/ANTIGEN),HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Winkler, F.K., Sogabe, S.",2.8,X-RAY DIFFRACTION,0.314,0.246,False,False,IGHV8,IGKV13,Kappa,1.42e-08,-10.7,SPR,25.0,9367779,1jrh_H_L_I,True
9oap,H,L,0,C,protein,,germline-targeting hiv-1 gp120 engineered outer domain eod-gt8-mingly ,IMMUNE SYSTEM,06/25/25,Crystal structure of antibody Fab G001-58 from IAVI G001 human trial in complex with a germline-targeting gp120 engineered outer domain eOD-GT8-mingly,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Lin, X., Wilson, I.A.",2.8,X-RAY DIFFRACTION,0.249,0.213,False,True,IGHV1,IGKV1,Kappa,,,,,,9oap_H_L_C,False
6pzf,H,L,0,A,protein,,neuraminidase,IMMUNE SYSTEM,07/31/19,Crystal structure of human NA-63 Fab in complex with neuraminidase from A/Hunan/02650/2016(H7N9),INFLUENZA A VIRUS (A/HUNAN/02650/2016(H7N9); HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus (a/hunan/02650/2016(h7n9),"Zhu, X., Wilson, I.A.",2.8,X-RAY DIFFRACTION,0.249,0.203,False,True,IGHV3,IGKV1,Kappa,,,,,,6pzf_H_L_A,False
6mej,H,L,0,C,protein,,e2 glycoprotein,IMMUNE SYSTEM,09/06/18,Broadly neutralizing antibodies against HCV use a CDRH3 disulfide motif to recognize an E2 glycoprotein site that can be targeted for vaccine design,HOMO SAPIENS; HEPACIVIRUS C,homo sapiens,homo sapiens,hepacivirus c,"Flyak, A.I., Bjorkman, P.J.",2.8,X-RAY DIFFRACTION,0.271,0.198,False,True,IGHV1,IGKV1,Kappa,,,,,,6mej_H_L_C,False
4k3j,H,L,0,B,protein,,hepatocyte growth factor beta chain,Transferase/Immune System/Growth Factor,04/10/13,Crystal structure of Onartuzumab Fab in complex with MET and HGF-beta,HOMO SAPIENS; SYNTHETIC CONSTRUCT,synthetic construct,synthetic construct,homo sapiens,"Ma, X., Starovasnik, M.A.",2.8,X-RAY DIFFRACTION,0.253,0.211,False,True,IGHV3,IGKV1,Kappa,1.2e-09,-12.170174257779676,SPR,,TBD,4k3j_H_L_B,False
5vta,F,E,0,C,protein,,dipeptidyl peptidase 4,HYDROLASE,05/16/17,Co-Crystal Structure of DPPIV with a Chemibody Inhibitor,RATTUS NORVEGICUS; MUS MUSCULUS,mus musculus,mus musculus,rattus norvegicus,"Wang, Z., Johnstone, S., Cheng, A.",2.8,X-RAY DIFFRACTION,0.300,0.250,False,True,IGHV1,IGKV4,Kappa,,,,,,5vta_F_E_C,False
1eo8,H,L,0,A,protein,,hemagglutinin (ha1 chain),Viral protein/Immune system,03/22/00,INFLUENZA VIRUS HEMAGGLUTININ COMPLEXED WITH A NEUTRALIZING ANTIBODY,INFLUENZA A VIRUS (A/X-31(H3N2)); MUS MUSCULUS,mus musculus,mus musculus,influenza a virus (a/x-31(h3n2)),"Fleury, D., Gigant, B., Daniels, R.S., Skehel, J.J., Knossow, M., Bizebard, T.",2.8,X-RAY DIFFRACTION,0.298,0.196,False,False,IGHV1,IGKV4,Kappa,8.9e-09,-10.87,SPR,22.0,10899782,1eo8_H_L_A,False
8gjm,D,E,0,A,protein,,spike glycoprotein,VIRAL PROTEIN,01/08/09,17b10 fab in complex with full-length SARS-CoV-2 Spike G614 trimer,Mus musculus; Severe acute respiratory syndrome coronavirus 2,mus musculus,mus musculus,severe acute respiratory syndrome coronavirus2 ,"Kwon, H.J., Zhang, J., Kosikova, M., Tang, W.C., Rodriguez, U.O., Peng, H.Q., Meseda, C.A., Pedro, C.L., Schmeisser, F., Lu, J.M., Zhou, B., Davis, C.T., Wentworth, D.E., Chen, W.H., Shriver, M.C., Pasetti, M.F., Weir, J.P., Chen, B., Xie, H.",2.8,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV9,Kappa,,,,,,8gjm_D_E_A,False
9og2,B,C,0,A,protein,,a28l,VIRAL PROTEIN,12/24/25,Globular domain of monkeypox virus OPG153 (A28) in complex with antibodies 08E11 and 12I12,Homo sapiens; Monkeypox virus,homo sapiens,homo sapiens,monkeypox virus,"Zhou, L., Rundlet, E.J., McLellan, J.S.",2.8,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV1,Kappa,,,,,,9og2_B_C_A,False
1egj,H,L,0,A,protein,,cytokine receptor common beta chain precursor,IMMUNE SYSTEM,02/15/00,DOMAIN 4 OF THE BETA COMMON CHAIN IN COMPLEX WITH AN ANTIBODY,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Rossjohn, J., McKinstry, W.J., Woodcock, J.M., McClure, B.J., Hercus, T.R., Parker, M.W., Lopez, A.F., Bagley, C.J.",2.8,X-RAY DIFFRACTION,0.288,0.228,False,False,IGHV1,IGKV3,Kappa,,,,,,1egj_H_L_A,False
9py7,H,L,0,A,protein,,sterol regulatory element-binding protein cleavage-activating protein ,MEMBRANE PROTEIN,12/24/25,Hamster Scap L1-L7 domain/Fab4G10 focused map,Cricetulus griseus; Mus musculus,mus musculus,mus musculus,cricetulus griseus,"Williams, B.C., Kober, D.L., Bai, X., Radhakrishnan, A., Rosenbaum, D.M.",2.8,ELECTRON MICROSCOPY,,,False,True,IGHV14,IGKV10,Kappa,,,,,,9py7_H_L_A,False
4dn4,H,L,0,M,protein,,c-c motif chemokine 2,IMMUNE SYSTEM,02/08/12,Crystal structure of the complex between cnto888 fab and mcp-1 mutant p8a,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,homo sapiens,"Obmolova, G., Teplyakov, A., Malia, T., Grygiel, T., Sweet, R., Snyder L., Gilliland, G.",2.8,X-RAY DIFFRACTION,0.266,0.196,False,True,IGHV1,IGKV3,Kappa,3.8e-11,-14.215718638691294,Unknown,,TBD,4dn4_H_L_M,False
9og2,D,E,0,A,protein,,a28l,VIRAL PROTEIN,12/24/25,Globular domain of monkeypox virus OPG153 (A28) in complex with antibodies 08E11 and 12I12,Homo sapiens; Monkeypox virus,homo sapiens,homo sapiens,monkeypox virus,"Zhou, L., Rundlet, E.J., McLellan, J.S.",2.8,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,9og2_D_E_A,False
2igf,H,L,0,P,peptide,,peptide (residues 69-87 of myohemerythrin),IMMUNOGLOBULIN,03/21/91,CRYSTAL STRUCTURES OF AN ANTIBODY TO A PEPTIDE AND ITS COMPLEX WITH PEPTIDE ANTIGEN AT 2.8 ANGSTROMS,MUS MUSCULUS,mus musculus,mus musculus,,"Stanfield, R.L., Wilson, I.A.",2.8,X-RAY DIFFRACTION,unknown,0.220,False,True,IGHV5,IGKV1,Kappa,,,,,,2igf_H_L_P,False
9i1q,K,G,0,D,protein,,receptor tyrosine-protein kinase erbb-3,ANTITUMOR PROTEIN,10/15/25,HER3 receptor in complex with the Fab fragment of TK-hu A3 monoclonal antibody,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Bulfaro, G., Savino, C., Costanzo, A., Fata, F., Vallone, B., Montemiglio, L.C.",2.8,X-RAY DIFFRACTION,0.263,0.209,False,True,IGHV2,IGKV2,Kappa,,,,,,9i1q_K_G_D,False
1nsn,H,L,0,S,protein,,staphylococcal nuclease,COMPLEX (IMMUNOGLOBULIN/HYDROLASE),06/06/95,THE CRYSTAL STRUCTURE OF ANTIBODY N10-STAPHYLOCOCCAL NUCLEASE COMPLEX AT 2.9 ANGSTROMS RESOLUTION,STAPHYLOCOCCUS AUREUS; MUS MUSCULUS,mus musculus,mus musculus,staphylococcus aureus,"Sheriff, S., Bossart-Whitaker, P.",2.8,X-RAY DIFFRACTION,unknown,0.195,False,False,IGHV3,IGKV3,Kappa,1e-10,-13.63,Other,,1704035,1nsn_H_L_S,False
8wsn,E,F,0,A,protein,,gn,VIRAL PROTEIN/IMMUNE SYSTEM,06/12/24,Crystal structure of SFTSV Gn and antibody SF1,Homo sapiens; SFTS virus JS4,homo sapiens,homo sapiens,sfts virus js4,"Chang, Z., Gao, F., Wu, Y.",2.8,X-RAY DIFFRACTION,0.291,0.240,False,True,IGHV5,IGKV3,Kappa,,,,,,8wsn_E_F_A,False
1tzi,B,A,0,V,protein,,vascular endothelial growth factor a,immune system,07/10/04,Crystal Structure of the Fab YADS2 Complexed with h-VEGF,MUS MUSCULUS; HOMO SAPIENS,mus musculus,mus musculus,homo sapiens,"Fellouse, F.A., Wiesmann, C., Sidhu, S.S.",2.8,X-RAY DIFFRACTION,0.254,0.218,False,True,IGHV5,IGKV6,Kappa,1e-08,-11.35,SPR,37.0,15306681,1tzi_B_A_V,False
8hld,J,N,0,C,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,06/05/24,S protein of SARS-CoV-2 in complex with 26434,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhang, Y.Y., Guo, Y.Y., Zhou, Q.",2.8,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV3,Lambda,,,,,,8hld_J_N_C,False
8hlc,J,N,0,C,protein,,spike glycoprotein,VIRAL PROTEIN,06/05/24,S protein of SARS-CoV-2 in complex with 3711,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhang, Y.Y., Guo, Y.Y., Zhou, Q.",2.8,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8hlc_J_N_C,False
6yax,I,M,0,B,protein,,unknown,IMMUNE SYSTEM,03/14/20,Crystal structure of CD32b (Fc Gamma Receptor IIb) in complex with Human IgG1 Fab fragment (5C05),HOMO SAPIENS,,,,"Fisher, H., Tews, I., Orr, C.",2.8,X-RAY DIFFRACTION,0.264,0.230,False,False,IGHV3,IGLV1,Lambda,,,,,,6yax_I_M_B,False
1frg,H,L,0,P,peptide,,influenza hemagglutinin ha1 (strain x47)(residues 101 - 108) ,VIRAL PROTEIN/IMMUNE SYSTEM,01/17/94,"CRYSTAL STRUCTURE, SEQUENCE, AND EPITOPE MAPPING OF A PEPTIDE COMPLEX OF AN ANTI-INFLUENZA HA PEPTIDE ANTIBODY FAB 26(SLASH)9: FINE-TUNING ANTIBODY SPECIFICITY",MUS MUSCULUS,,mus musculus,,"Churchill, M.E.A., Wilson, I.A.",2.8,X-RAY DIFFRACTION,unknown,0.190,False,True,IGHV5,IGKV8,Kappa,,,,,,1frg_H_L_P,False
7xs8,A,L,0,E,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,04/26/23,Crystal structure of SARS-CoV-2 spike receptor binding domain bound with P5S-1H1 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Wang, X., Wang, Z.",2.8,X-RAY DIFFRACTION,0.267,0.216,False,True,IGHV3,IGKV1,Kappa,,,,,,7xs8_A_L_E,False
1mhp,H,L,0,A,protein,,"integrin alpha 1, (residues 169-360)",IMMUNE SYSTEM,08/20/02,Crystal structure of a chimeric alpha1 integrin I-domain in complex with the Fab fragment of a humanized neutralizing antibody,RATTUS NORVEGICUS; MUS MUSCULUS,mus musculus,mus musculus,rattus norvegicus,"Karpusas, M., Taylor, F., Ferrant, J., Weinreb, P., Garber, E.",2.8,X-RAY DIFFRACTION,0.272,0.213,False,True,IGHV3,IGKV1D,Kappa,,,,,,1mhp_H_L_A,True
8vyn,N,O,0,C,protein,,envelope glycoprotein b,VIRAL PROTEIN/IMMUNE SYSTEM,09/18/24,"Soluble ectodomain of human cytomegalovirus (HCMV) glycoprotein B (gB) stabilized in a prefusion-like conformation in complex with 1G2 and 7H3, composite map (global and local) and model",Homo sapiens; Human betaherpesvirus 5,homo sapiens,homo sapiens,human betaherpesvirus 5,"Sponholtz, M.R., Byrne, P.O., McLellan, J.S.",2.8,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGLV1,Lambda,,,,,,8vyn_N_O_C,False
8vyn,L,M,0,C,protein,,envelope glycoprotein b,VIRAL PROTEIN/IMMUNE SYSTEM,09/18/24,"Soluble ectodomain of human cytomegalovirus (HCMV) glycoprotein B (gB) stabilized in a prefusion-like conformation in complex with 1G2 and 7H3, composite map (global and local) and model",Homo sapiens; Human betaherpesvirus 5,homo sapiens,homo sapiens,human betaherpesvirus 5,"Sponholtz, M.R., Byrne, P.O., McLellan, J.S.",2.8,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV1,Lambda,,,,,,8vyn_L_M_C,False
7uop,H,L,0,A,protein,,fusion glycoprotein f0,VIRAL PROTEIN/Immune System,03/29/23,Prefusion-stabilized Nipah virus fusion protein complexed with Fab 4H3,Mus musculus; Nipah henipavirus,mus musculus,mus musculus,nipah henipavirus,"Byrne, P.O., McLellan, J.S.",2.8,ELECTRON MICROSCOPY,,,False,True,IGHV9,IGKV4,Kappa,,,,,,7uop_H_L_A,False
5xmh,H,L,0,A,protein,,immunoglobulin gamma-1 heavy chain,IMMUNE SYSTEM,05/15/17,Crystal structure of an IgM rheumatoid factor YES8c in complex with IgG1 Fc,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Shiroishi, M., Shimokawa, K., Lee, J.M., Kusakabe, M., Ueda, T.",2.8,X-RAY DIFFRACTION,0.272,0.220,False,True,IGHV1,IGKV3,Kappa,0.0001599999999999,-5.178506877772148,SPR,,TBD,5xmh_H_L_A,False
5ugy,I,M,0,C,protein,,hemagglutinin ha1,VIRAL PROTEIN/IMMUNE SYSTEM,01/10/17,Influenza hemagglutinin in complex with a neutralizing antibody,INFLUENZA A VIRUS (A/SOLOMON ISLANDS/3/2006(H1N1)); HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus (a/solomonislands/3/2006(h1n1)) ,"Whittle, J.R.R., Jenni, S., Harrison, S.C.",2.801,X-RAY DIFFRACTION,0.289,0.259,False,True,IGHV1,IGLV3,Lambda,,,,,,5ugy_I_M_C,False
4jzj,A,B,0,D,protein,,interleukin-3 receptor subunit alpha,CYTOKINE RECEPTOR/IMMUNE SYSTEM,04/03/13,Crystal Structure of Receptor-Fab Complex,HOMO SAPIENS; MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Broughton, S.E., Parker, M.W.",2.801,X-RAY DIFFRACTION,0.244,0.185,False,False,IGHV5,IGKV4,Kappa,4e-09,-11.456840020052727,SPR,,TBD,4jzj_A_B_D,False
8ee8,D,C,0,B,protein,,envelope protein e,VIRAL PROTEIN/IMMUNE SYSTEM,08/30/23,Crystal structure of a NHP anti-ZIKV neutralizing antibody rhMZ100-C in complex with ZIKV E glycoprotein,Macaca mulatta; Zika virus ZIKV/H. sapiens/FrenchPolynesia/10087PF/2013,macaca mulatta,macaca mulatta,zika virus zikv/h.sapiens/frenchpolynesia/10087pf/2013 ,"Sankhala, R.S., Joyce, M.G.",2.803,X-RAY DIFFRACTION,0.296,0.241,False,True,IGHV3,IGLV11,Lambda,,,,,,8ee8_D_C_B,False
8rmx,B,C,0,A,protein,,protein-glutamine gamma-glutamyltransferase e,TRANSFERASE,03/12/25,Transglutaminase 3 in complex with DH patient-derived Fab DH63-A02,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Heggelund, J.E., Sollid, L.M.",2.803,X-RAY DIFFRACTION,0.250,0.205,False,True,IGHV2,IGKV4,Kappa,,,,,,8rmx_B_C_A,False
8rmx,E,F,0,D,protein,,protein-glutamine gamma-glutamyltransferase e,TRANSFERASE,03/12/25,Transglutaminase 3 in complex with DH patient-derived Fab DH63-A02,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Heggelund, J.E., Sollid, L.M.",2.803,X-RAY DIFFRACTION,0.250,0.205,False,True,IGHV2,IGKV4,Kappa,,,,,,8rmx_E_F_D,False
7df1,F,J,0,C,protein,,4f2 cell-surface antigen heavy chain,ANTITUMOR PROTEIN,12/07/22,Crystal structure of human CD98 heavy chain extracellular domain in complex with S1-F4 scFv,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Liu, X., Ding, J., Sui, J., Tian, X.",2.806,X-RAY DIFFRACTION,0.249,0.217,False,True,IGHV1,IGKV4,Kappa,,,,,,7df1_F_J_C,False
4f15,K,L,0,J,protein,,hemagglutinin,IMMUNE SYSTEM,05/06/12,Molecular basis of infectivity of 2009 pandemic H1N1 influenza A viruses,INFLUENZA A VIRUS; MUS MUSCULUS,mus musculus,mus musculus,influenza a virus,"Kim, K.H., Cho, K.J., Lee, J.H., Park, Y.H., Khan, T.G., Lee, J.Y., Kang, S.H., Alam, I.",2.81,X-RAY DIFFRACTION,0.289,0.233,False,False,IGHV3,IGKV7,Kappa,,,,,,4f15_K_L_J,False
8dgw,E,F,0,K,peptide,,spike protein s2',IMMUNE SYSTEM,01/25/23,Crystal structure of HCoV-HKU1 spike stem helix peptide in complex with Fab of broadly neutralizing antibody CC95.108 isolated from a vaccinated COVID-19 convalescent,Homo sapiens; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,human coronavirus hku1 (isolate n1),"Liu, H., Wilson, I.A.",2.81,X-RAY DIFFRACTION,0.248,0.217,False,True,IGHV1,IGLV1,Lambda,,,,,,8dgw_E_F_K,False
2nr6,F,E,0,B,protein,,aspartic protease bla g 2,HYDROLASE/IMMUNE SYSTEM,11/01/06,Crystal structure of the complex of antibody and the allergen Bla g 2,BLATTELLA GERMANICA; MUS MUSCULUS,mus musculus,mus musculus,blattella germanica,"Li, M., Gustchina, A., Wlodawer, A., Pomes, A., Wunschmann, S.",2.81,X-RAY DIFFRACTION,0.281,0.232,False,True,IGHV14,IGKV6,Kappa,,,,,,2nr6_F_E_B,False
7nx3,B,C,0,F,protein,,alk tyrosine kinase receptor,PROTEIN BINDING,03/17/21,Crystal structure of ALK in complex with Fab324,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"De Munck, S., Savvides, S.N.",2.81,X-RAY DIFFRACTION,0.266,0.228,False,True,IGHV1,IGKV3,Kappa,,,,,,7nx3_B_C_F,False
2gsi,B,A,0,W,peptide,,thermonuclease,IMMUNE SYSTEM,04/26/06,Crystal Structure of a Murine Fab in Complex with an 11 Residue Peptide Derived from Staphylococcal Nuclease,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,,"Armstrong, A.A., Amzel, L.M.",2.81,X-RAY DIFFRACTION,0.293,0.221,False,False,IGHV14,IGKV3,Kappa,,,,,,2gsi_B_A_W,False
7wkx,A,C,0,F,protein,,interleukin-17a,CYTOKINE,01/12/22,IL-17A in complex with the humanized antibody HB0017,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Xu, J., Zhu, X., He, Y.",2.81,X-RAY DIFFRACTION,0.254,0.206,False,True,IGHV7,IGKV2,Kappa,,,,,,7wkx_A_C_F,False
8jva,B,A,0,F,protein,,spike protein s2',VIRAL PROTEIN/IMMUNE SYSTEM,05/22/24,Cryo-EM structure of the N-terminal domain of Omicron BA.1 in complex with nanobody N235 and S2L20 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2; Vicugna pacos,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Liu, B., Liu, H.H., Han, P., Qi, J.X.",2.81,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8jva_B_A_F,False
8eee,A,B,0,Z,protein,,envelope protein e,VIRAL PROTEIN/IMMUNE SYSTEM,08/30/23,Crystal structure of a NHP anti-ZIKV neutralizing antibody rhMZ104-d in complex with ZIKV E glycoprotein,Macaca mulatta; Zika virus ZIKV/H. sapiens/FrenchPolynesia/10087PF/2013,macaca mulatta,macaca mulatta,zika virus zikv/h.sapiens/frenchpolynesia/10087pf/2013 ,"Sankhala, R.S., Joyce, M.G.",2.819,X-RAY DIFFRACTION,0.275,0.217,False,True,IGHV3,IGLV11,Lambda,,,,,,8eee_A_B_Z,False
8eee,H,L,0,E,protein,,envelope protein e,VIRAL PROTEIN/IMMUNE SYSTEM,08/30/23,Crystal structure of a NHP anti-ZIKV neutralizing antibody rhMZ104-d in complex with ZIKV E glycoprotein,Macaca mulatta; Zika virus ZIKV/H. sapiens/FrenchPolynesia/10087PF/2013,macaca mulatta,macaca mulatta,zika virus zikv/h.sapiens/frenchpolynesia/10087pf/2013 ,"Sankhala, R.S., Joyce, M.G.",2.819,X-RAY DIFFRACTION,0.275,0.217,False,True,IGHV3,IGLV11,Lambda,,,,,,8eee_H_L_E,False
9ofo,H,L,0,A,protein,,surface glycoprotein,VIRAL PROTEIN,12/03/25,HCoV-229E S2P bound by three DH1533 Fabs,Homo sapiens; Human coronavirus 229E,homo sapiens,homo sapiens,human coronavirus 229e,"Wrapp, D.",2.82,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,9ofo_H_L_A,False
5dur,B,D,0,A,protein,,hemagglutinin,IMMUNE SYSTEM,09/20/15,Influenza A virus H5 hemagglutinin globular head in complex with antibody 100F4,INFLUENZA A VIRUS (A/ANHUI/1/2005(H5N1)); HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus (a/anhui/1/2005(h5n1)),"Zuo, T., Sun, J., Wang, G., Zhou, P., Wang, X., Zhang, L.",2.82,X-RAY DIFFRACTION,0.257,0.208,False,True,IGHV4,IGLV1,Lambda,,,,,,5dur_B_D_A,False
6wgl,A,B,0,C,protein,,interleukin-4 receptor subunit alpha,IMMUNE SYSTEM,04/05/20,Dupilumab fab with Crystal Kappa design complexed with human IL-4 receptor,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Druzina, Z., Atwell, S., Pustilnik, A., Antonysamy, S., Ho, C., Lieu, R., Hendle, J., Benach, J., Wang, J.",2.82,X-RAY DIFFRACTION,0.304,0.245,False,True,IGHV3,IGKV2,Kappa,,,,,,6wgl_A_B_C,False
9irc,H,L,0,A,protein,,solute carrier family 15 member 4,MEMBRANE PROTEIN/IMMUNE SYSTEM,08/20/25,CyroEM structure of hSLC15A4+TASL+Fab235,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Zhu, Y.L., Zhang, Q.X., Gao, P.",2.82,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGKV4,Kappa,,,,,,9irc_H_L_A,False
4yqx,N,O,0,M,protein,,interleukin-2,CYTOKINE/IMMUNE SYSTEM,03/13/15,Mouse IL-2 Bound to JES6-1 scFv Fragment,RATTUS NORVEGICUS; MUS MUSCULUS,rattus norvegicus,rattus norvegicus,mus musculus,"Spangler, J.B., Luca, V.C., Jude, K.M., Garcia, K.C.",2.826,X-RAY DIFFRACTION,0.204,0.170,False,True,IGHV1,IGKV8,Kappa,,,,,,4yqx_N_O_M,False
4jpv,H,L,0,G,protein,,hiv-1 clade a strain 93th057 gp120 with loop d and loopd v5replaced from hiv strain 3415v1 ,viral protein/immune system,03/19/13,Crystal structure of broadly and potently neutralizing antibody 3bnc117 in complex with hiv-1 gp120,HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Zhou, T., Moquin, S., Kwong, P.D.",2.827,X-RAY DIFFRACTION,0.259,0.199,False,True,IGHV1,IGKV1,Kappa,,,,,,4jpv_H_L_G,False
7tb8,D,E,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/Immune System,12/21/21,Cryo-EM structure of SARS-CoV-2 spike in complex with antibodies B1-182.1 and A19-61.1,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, T., Tsybovsky, T., Kwong, P.D.",2.83,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7tb8_D_E_A,False
4kxz,J,I,0,B,protein,,transforming growth factor beta-2,immune system,05/28/13,crystal structure of tgfb2 in complex with GC2008.,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Mathieu, M., Moulin, A.G., Wei, R.",2.83,X-RAY DIFFRACTION,0.222,0.183,False,True,IGHV1,IGKV3,Kappa,3e-09,-11.627286953008984,SPR,,TBD,4kxz_J_I_B,False
2zch,H,L,0,P,protein,,prostate-specific antigen,IMMUNE SYSTEM,11/08/07,Crystal structure of human prostate specific antigen complexed with an activating antibody,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Menez, R., Stura, E., Jolivet-Reynaud, C.",2.83,X-RAY DIFFRACTION,0.270,0.203,False,False,IGHV1,IGKV3,Kappa,,,,,,2zch_H_L_P,False
7kzb,H,L,0,C,protein,,spike glycoprotein,VIRAL PROTEIN/Immune System,12/10/20,Potent SARS-CoV-2 binding and neutralization through maturation of iconic SARS-CoV-1antibodies,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Langley, D.B., Christ, D.",2.83,X-RAY DIFFRACTION,0.336,0.251,False,True,IGHV3,IGKV1,Kappa,,,,,,7kzb_H_L_C,False
9mnq,H,L,0,E,protein,,hepatitis c virus envelope glycoprotein e2 core fromgenotype 6a ,VIRAL PROTEIN/IMMUNE SYSTEM,01/14/26,Structure of Hepatitis C virus envelope glycoprotein E2 core from genotype 6a bound to broadly neutralizing antibody RM10-30,Macaca mulatta; Recombinant Hepatitis C virus HK6a/JFH-1,macaca mulatta,macaca mulatta,recombinant hepatitis c virus hk6a/jfh-1,"Nguyen, T.K.Y., Wilson, I.A.",2.83,X-RAY DIFFRACTION,0.287,0.258,False,True,IGHV1,IGKV1,Kappa,,,,,,9mnq_H_L_E,False
8jkf,m,n,0,b,protein,,unknown,VIRAL PROTEIN/IMMUNE SYSTEM,12/11/24,CryoEM structure of sNS1 complexed with Fab 3G2,Homo sapiens; Zika virus,homo sapiens,homo sapiens,zika virus,"Chen, Q., Qi, P.",2.83,ELECTRON MICROSCOPY,,,False,False,IGHV3,IGKV1,Kappa,,,,,,8jkf_m_n_b,False
7tb8,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/Immune System,12/21/21,Cryo-EM structure of SARS-CoV-2 spike in complex with antibodies B1-182.1 and A19-61.1,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, T., Tsybovsky, T., Kwong, P.D.",2.83,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,7tb8_H_L_A,False
6h3t,H,L,0,A,protein,,envelopment polyprotein,VIRAL PROTEIN,07/19/18,Schmallenberg Virus Glycoprotein Gc Head Domain in Complex with scFv 1C11,MUS MUSCULUS; BOVINE SCHMALLENBERG VIRUS,mus musculus,mus musculus,bovine schmallenberg virus,"Hellert, J., Aebischer, A., Wernike, K., Haouz, A., Brocchi, E., Reiche, S., Guardado-Calvo, P., Beer, M., Rey, F.A.",2.836,X-RAY DIFFRACTION,0.262,0.213,False,True,IGHV1,IGKV8,Kappa,,,,,,6h3t_H_L_A,False
9mlk,J,N,0,A,protein,,transmembrane protein,VIRAL PROTEIN,07/30/25,Post-fusion HERV-K Envelope Protein in complex with Kenv-4 Fab,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Sun, C., Shek, J., Hastie, K., Saphire, E.O.",2.84,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV4,Kappa,,,,,,9mlk_J_N_A,False
6vgr,H,L,0,B,protein,,dipeptidase 3,HYDROLASE,05/13/20,Crystal Structure of Human Dipeptidase 3 in Complex with Fab of SC-003,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Hayashi, K., Longenecker, K.L., Vivona, S.",2.84,X-RAY DIFFRACTION,0.248,0.190,False,True,IGHV1,IGKV3,Kappa,,,,,,6vgr_H_L_B,False
5k59,E,F,0,B,protein,,uncharacterized leukocidin-like protein 1,IMMUNE SYSTEM,05/23/16,Crystal structure of LukGH from Staphylococcus aureus in complex with a neutralising antibody,STAPHYLOCOCCUS AUREUS (STRAIN USA300); HOMO SAPIENS,homo sapiens,homo sapiens,staphylococcus aureus (strain usa300),"WELIN, M., LOGAN, D.T., BADARAU, A., MIRKINA, I., ZAUNER, G., DOLEZILKOVA, I., NAGY, E.",2.84,X-RAY DIFFRACTION,0.237,0.197,False,True,IGHV4,IGKV1,Kappa,2.5e-12,-15.82804176815236,SPR,,TBD,5k59_E_F_B,False
9kyo,H,L,0,A,protein,,sodium- and chloride-dependent taurine transporter,MEMBRANE PROTEIN/IMMUNE SYSTEM,07/02/25,GES bound mTAUT,Mus musculus,mus musculus,mus musculus,mus musculus,"She, J., Wang, M.X., He, J.",2.84,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGKV4,Kappa,,,,,,9kyo_H_L_A,False
6pe8,H,L,0,T,protein,,tumor necrosis factor receptor superfamily member 5,IMMUNE SYSTEM,06/20/19,Crystal structure of CD40/ABBV-323 FAB complex,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Argiriadi, M.A.",2.84,X-RAY DIFFRACTION,0.265,0.205,False,True,IGHV3,IGKV4,Kappa,,,,,,6pe8_H_L_T,False
7c94,E,D,0,F,peptide,,peptide from podoplanin,IMMUNE SYSTEM,06/04/20,Crystal structure of the anti-human podoplanin antibody Fab fragment complex with glycopeptide,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Suzuki, K., Nakamura, S., Ogasawara, S., Naruchi, K., Shimabukuro, J., Tukahara, N., Kaneko, M.K., Kato, Y., Murata, T.",2.84,X-RAY DIFFRACTION,0.255,0.220,False,False,IGHV5,IGKV8,Kappa,,,,,,7c94_E_D_F,False
9js7,J,M,0,C,protein,,genome polyprotein,VIRUS/IMMUNE SYSTEM,10/01/25,cryoEM of antibody complexed with mature Zika virus,Homo sapiens; Zika virus ZIKV/H. sapiens/FrenchPolynesia/10087PF/2013,homo sapiens,homo sapiens,zika virus zikv/h.sapiens/frenchpolynesia/10087pf/2013 ,"Shu, B., Lok, S.",2.84,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV2,Lambda,,,,,,9js7_J_M_C,False
8z6s,I,H,0,C,protein,,"spike glycoprotein,fibritin,expression tag",VIRAL PROTEIN/IMMUNE SYSTEM,02/12/25,Structure of XBB.1.16 S trimer with 2 down-RBDs complex with antibody CYFN1006-1.,Homo sapiens; Severe acute respiratory syndrome coronavirus 2; synthetic construct; Tequatrovirus T4,homo sapiens,homo sapiens,"severe acute respiratory syndrome coronavirus2, tequatrovirus t4, synthetic construct ","Wang, Y.J., Sun, L.",2.84,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGLV2,Lambda,,,,,,8z6s_I_H_C,False
7qny,A,B,0,E,protein,,surface glycoprotein,VIRAL PROTEIN,12/23/21,The receptor binding domain of SARS-CoV-2 spike glycoprotein in complex with COVOX-58 and COVOX-158 Fabs,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, D., Ren, J., Stuart, D.I.",2.84,X-RAY DIFFRACTION,0.278,0.226,False,True,IGHV3,IGLV3,Lambda,,,,,,7qny_A_B_E,False
4irz,H,L,0,A,protein,,integrin alpha4 subunit,IMMUNE SYSTEM,01/15/13,Crystal structure of A4b7 headpiece complexed with Fab Natalizumab,ORYCTOLAGUS CUNICULUS; HOMO SAPIENS,homo sapiens,homo sapiens,oryctolagus cuniculus,"Yu, Y., Schurpf, T., Springer, T.A.",2.84,X-RAY DIFFRACTION,0.287,0.237,False,True,IGHV1,IGKV1,Kappa,,,,,,4irz_H_L_A,False
8sdh,C,D,0,A,protein,,spike protein s1,IMMUNE SYSTEM,08/07/24,Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody CC25.56,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Yuan, M., Wilson, I.A.",2.84,X-RAY DIFFRACTION,0.283,0.246,False,True,IGHV5,IGLV3,Lambda,,,,,,8sdh_C_D_A,False
7mfr,B,A,0,P,peptide,,gly-gly-met,IMMUNE SYSTEM,04/10/21,Crystal Structure of a Fab fragment bound to peptide GGM,ORYCTOLAGUS CUNICULUS; SYNTHETIC CONSTRUCT,oryctolagus cuniculus,oryctolagus cuniculus,homo sapiens,"Sudhamsu, J.",2.848,X-RAY DIFFRACTION,0.260,0.211,False,True,IGHV1,IGKV1,Kappa,,,,,,7mfr_B_A_P,False
9mnu,H,L,0,E,protein,,hepatitis c virus envelope glycoprotein e2 core fromgenotype 6a ,VIRAL PROTEIN/IMMUNE SYSTEM,01/14/26,Structure of Hepatitis C virus envelope glycoprotein E2 core from genotype 6a bound to broadly neutralizing antibody RM11-48,Macaca mulatta; Recombinant Hepatitis C virus HK6a/JFH-1,macaca mulatta,macaca mulatta,recombinant hepatitis c virus hk6a/jfh-1,"Nguyen, T.K.Y., Stanfield, R.L., Wilson, I.A.",2.85,X-RAY DIFFRACTION,0.275,0.240,False,True,IGHV1,IGKV7,Kappa,,,,,,9mnu_H_L_E,False
4rdq,K,J,0,B,protein,,bestrophin-1,TRANSPORT PROTEIN,09/19/14,"Calcium-activated chloride channel bestrophin-1, from chicken, in complex with Fab antibody fragments, chloride and calcium",GALLUS GALLUS; MUS MUSCULUS,mus musculus,mus musculus,gallus gallus,"Dickson, V.K., Pedi, L., Long, S.B.",2.85,X-RAY DIFFRACTION,0.234,0.217,False,False,IGHV1,IGKV12,Kappa,1.5000000000000002e-08,-10.67372125591851,Unknown,,TBD,4rdq_K_J_B,False
5anm,D,C,0,E,protein,,ig epsilon chain c region,,09/07/15,Crystal structure of IgE Fc in complex with a neutralizing antibody,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Cohen, E.S., Dobson, C.L., Kack, H., Wang, B., Sims, D.A., Lloyd, C.O., England, E., Rees, D.G., Guo, H., Karagiannis, S.N., O'Brien, S., Persdotter, S., Ekdahl, H., Butler, R., Keyes, F., Oakley, S., Carlsson, M., Briend, E., Wilkinson, T., Anderson, I.K., Monk, P.D., vonWachenfeldt, K., Eriksson, P.O., Gould, H.J., Vaughan, T.J., May, R.D.",2.85,X-RAY DIFFRACTION,0.25993,0.19553,False,True,IGHV1,IGLV1,Lambda,1.95e-12,-15.975251068647337,Kinetic Exclusion Assay,,TBD,5anm_D_C_E,False
6yxm,H,L,0,B,peptide,,unknown,IMMUNE SYSTEM,05/03/20,Crystal structure of ACPA 1F2 in complex with CII-C-39-CIT,HOMO SAPIENS,,,,"Ge, C., Holmdahl, R.",2.85,X-RAY DIFFRACTION,0.276,0.210,False,False,IGHV7,unknown,unknown,,,,,,6yxm_H_L_B,False
4hzl,A,B,0,F,peptide,,e2 envelop protein,IMMUNE SYSTEM,11/15/12,Neutralizing antibody mAb#8 in complex with the Epitope II of HCV E2 envelope protein,"MUS MUSCULUS; RECOMBINANT HEPATITIS C VIRUS H77(5'UTR-NS2)/JFH1_V787A,Q1247L",mus musculus,mus musculus,"recombinant hepatitis c virus h77(5'utr-ns2)/jfh1_v787a,q1247l ","Deng, L., Zhang, P.",2.85,X-RAY DIFFRACTION,0.277,0.221,False,False,IGHV5,IGKV1,Kappa,,,,,,4hzl_A_B_F,False
7kyo,H,L,0,B,protein,,"manganese abc transporter, atp-binding protein",TRANSPORT PROTEIN/IMMUNE SYSTEM,12/08/20,PsaBC from Streptococcus pneumoniae in complex with Fab,STREPTOCOCCUS PNEUMONIAE SEROTYPE 2 (STRAIN D39 / NCTC 7466); MUS MUSCULUS,mus musculus,mus musculus,streptococcus pneumoniae serotype 2 (strain d39/ nctc 7466) ,"Maher, M.J., Sjohamn, J.",2.85,X-RAY DIFFRACTION,0.271,0.238,False,True,IGHV5,IGKV3,Kappa,,,,,,7kyo_H_L_B,False
9pw4,C,D,0,A,protein,,spike protein s1,VIRAL PROTEIN,11/19/25,Structure of V30V4 in complex with SARS-CoV-2 spike,Homo sapiens; Mus musculus; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Wang, Y.J., Kibria, G., Wesemann, D., Chen, B.",2.85,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV3,Kappa,,,,,,9pw4_C_D_A,False
5anm,H,L,0,F,protein,,ig epsilon chain c region,,09/07/15,Crystal structure of IgE Fc in complex with a neutralizing antibody,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Cohen, E.S., Dobson, C.L., Kack, H., Wang, B., Sims, D.A., Lloyd, C.O., England, E., Rees, D.G., Guo, H., Karagiannis, S.N., O'Brien, S., Persdotter, S., Ekdahl, H., Butler, R., Keyes, F., Oakley, S., Carlsson, M., Briend, E., Wilkinson, T., Anderson, I.K., Monk, P.D., vonWachenfeldt, K., Eriksson, P.O., Gould, H.J., Vaughan, T.J., May, R.D.",2.85,X-RAY DIFFRACTION,0.25993,0.19553,False,True,IGHV1,IGLV1,Lambda,1.95e-12,-15.975251068647337,Kinetic Exclusion Assay,,TBD,5anm_H_L_F,False
8sw4,H,L,0,B,protein,,envelope glycoprotein gp41,VIRAL PROTEIN,01/08/09,"BG505 GT1.1 SOSIP in complex with NHP Fabs 21N13, 21M20 and RM20A3",Human immunodeficiency virus 1; Macaca,macaca,macaca,human immunodeficiency virus 1,"Ozorowski, G., Torres, J.L., Zhang, S., Ward, A.B.",2.85,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8sw4_H_L_B,False
9dlf,B,A,0,C,protein,,arabinosyltransferase aftb,MEMBRANE PROTEIN,06/25/25,Arabinosyltransferase AftB in complex with Fab_B3,Homo sapiens; Mycolicibacterium chubuense,homo sapiens,homo sapiens,mycolicibacterium chubuense,"Liu, Y., Mancia, F.",2.85,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,9dlf_B_A_C,False
4y5y,A,B,0,C,protein,,erythropoietin receptor,protein binding/immune system,02/12/15,Diabody 330 complex with EpoR,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Moraga, I., Guo, F., Ozkan, E., Jude, K.M., Garcia, K.C.",2.85,X-RAY DIFFRACTION,0.241,0.221,False,True,IGHV3,IGLV2,Lambda,,,,,,4y5y_A_B_C,False
2hh0,H,L,0,P,peptide,,prion protein,IMMUNE SYSTEM,06/27/06,"Structure of an Anti-PrP Fab, P-Clone, in Complex with its Cognate Bovine Peptide Epitope.","MUS MUSCULUS, HOMO SAPIENS; SYNTHETIC CONSTRUCT","mus musculus, homo sapiens","mus musculus, homo sapiens",,"Kanyo, Z.K.",2.85,X-RAY DIFFRACTION,0.282,0.222,True,True,IGHV14,IGKV9,Kappa,,,,,,2hh0_H_L_P,False
8sw4,O,P,0,A,protein,,bg505 gt1.1 sosip gp120,VIRAL PROTEIN,01/08/09,"BG505 GT1.1 SOSIP in complex with NHP Fabs 21N13, 21M20 and RM20A3",Human immunodeficiency virus 1; Macaca,macaca,macaca,human immunodeficiency virus 1,"Ozorowski, G., Torres, J.L., Zhang, S., Ward, A.B.",2.85,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV1,Kappa,,,,,,8sw4_O_P_A,False
9pdy,D,G,0,C,protein,,fusion glycoprotein f0,VIRAL PROTEIN/IMMUNE SYSTEM,09/03/25,Human antibody Fab MPV510 bound to hMPV DsCav-ES2-IPDS F protein,Homo sapiens; human metapneumovirus,homo sapiens,homo sapiens,human metapneumovirus,"Ghazi Esfahani, N., Mousa, J., Khalil, A.M.",2.85,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV1,Kappa,,,,,,9pdy_D_G_C,False
9byf,H,L,0,A,protein,,outer surface protein a,IMMUNE SYSTEM/ANTIGEN,08/27/25,Fab 212-55 in complex with OspA,Borreliella burgdorferi; Homo sapiens,homo sapiens,homo sapiens,borreliella burgdorferi,"Rudolph, M.J., Mantis, N.",2.85,X-RAY DIFFRACTION,0.288,0.230,False,True,IGHV3,IGKV3,Kappa,,,,,,9byf_H_L_A,False
9ubq,C,D,0,A,protein,,middle s protein,VIRAL PROTEIN/IMMUNE SYSTEM,10/29/25,HBsAg in complex with H020 Fab,Hepatitis B virus; Homo sapiens,homo sapiens,homo sapiens,hepatitis b virus,"Chen, L., Tao, W., He, X.",2.86,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV1,Kappa,,,,,,9ubq_C_D_A,False
9jim,H,L,0,A,protein,,pro-secreted protein orf2,VIRAL PROTEIN/IMMUNE SYSTEM,07/23/25,Rat hepatitis E virus capsid protein E2s domain in complex with Fab C145,Homo sapiens; Rocahepevirus ratti,homo sapiens,homo sapiens,rocahepevirus ratti,"Liu, L., Zheng, Q., Li, S.",2.86,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV1,Lambda,,,,,,9jim_H_L_A,False
7s5p,H,L,0,A,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,03/09/22,Crystal structure of SARS-CoV-2 B.1.351 variant receptor binding domain in complex with neutralizing antibody CS23,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Yuan, M., Wilson, I.A.",2.86,X-RAY DIFFRACTION,0.247,0.208,False,True,IGHV3,IGLV3,Lambda,,,,,,7s5p_H_L_A,False
8hrd,W,X,0,T,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,12/20/23,Crystal structure of the receptor binding domain of SARS-CoV-2 Delta variant in complex with IMCAS74 Fab and W14 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhao, R.C., Wu, L.L., Han, P.",2.86,X-RAY DIFFRACTION,0.244,0.212,False,True,IGHV5,IGLV1,Lambda,,,,,,8hrd_W_X_T,False
8hrd,N,Q,0,K,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,12/20/23,Crystal structure of the receptor binding domain of SARS-CoV-2 Delta variant in complex with IMCAS74 Fab and W14 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhao, R.C., Wu, L.L., Han, P.",2.86,X-RAY DIFFRACTION,0.244,0.212,False,True,IGHV4,IGKV1,Kappa,,,,,,8hrd_N_Q_K,False
5o1r,H,L,0,A,protein,,gna2132,IMMUNE SYSTEM,05/19/17,human Fab 5H2 bound to NHBA-C3 from Neisseria meningitidis serogroup B,NEISSERIA MENINGITIDIS; HOMO SAPIENS,homo sapiens,homo sapiens,neisseria meningitidis,"Enrico, M., Maritan, M.",2.86,X-RAY DIFFRACTION,0.222,0.178,False,True,IGHV4,IGKV1,Kappa,,,,,,5o1r_H_L_A,False
3nfp,A,B,0,K,protein,,interleukin-2 receptor subunit alpha,Immune system/Cytokine,06/10/10,Crystal structure of the Fab fragment of therapeutic antibody daclizumab in complex with IL-2Ra (CD25) ectodomain,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Yang, H., Wang, J., Du, J., Zhong, C., Guo, Y., Ding, J.",2.86,X-RAY DIFFRACTION,0.301,0.253,False,True,IGHV1,IGKV1,Kappa,2.7e-10,-13.05,SPR,25.0,20820193,3nfp_A_B_K,False
9p8x,H,L,0,A,protein,,tumor necrosis factor receptor superfamily member 18,IMMUNE SYSTEM,12/31/25,Crystal structure of GITR in complex with ligand-non-competitive Ab#1 Fab fragment,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Huang, C.-S., Mosyak, L., Maben, Z.",2.86,X-RAY DIFFRACTION,0.257,0.214,False,True,IGHV1,IGKV4,Kappa,,,,,,9p8x_H_L_A,False
7uxl,A,B,0,R,protein,,gametocyte surface protein p45/48,IMMUNE SYSTEM,02/15/23,Crystal structure of malaria transmission-blocking antigen Pfs48/45-6C variant in complex with human antibodies RUPA-44 and RUPA-29,Homo sapiens; Plasmodium falciparum,homo sapiens,homo sapiens,plasmodium falciparum,"Hailemariam, S., Ivanochko, D., Julien, J.P.",2.86,X-RAY DIFFRACTION,0.222,0.183,False,True,IGHV3,IGLV3,Lambda,,,,,,7uxl_A_B_R,False
7quh,H,L,0,A,protein,,sialic acid-binding ig-like lectin 8,IMMUNE SYSTEM,05/31/23,Siglec-8 in complex with therapeutic Fab AK002.,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Lenza, M.P., Oyenarte, I., Jimenez Barbero, J., Ereno Orbea, J.",2.867,X-RAY DIFFRACTION,0.284,0.225,False,True,IGHV3,IGKV3,Kappa,,,,,,7quh_H_L_A,False
8kdm,G,F,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,08/14/24,Structure of SARS-CoV Spike protein complexed with antibody PW5-5,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Sun, L., Mao, Q., Wang, Y.",2.87,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,8kdm_G_F_A,False
6xsn,H,L,0,C,peptide,,16055_v1v2-1fd6,IMMUNE SYSTEM,07/15/20,Crystal structure of NHP VD20.5A4 Fab in complex with 16055 V1V2 1FD6 scaffold,MACACA MULATTA,macaca mulatta,macaca mulatta,macaca mulatta,"Aljedani, S., Pancera, M.",2.87,X-RAY DIFFRACTION,0.267,0.221,False,False,IGHV4,IGKV1,Kappa,,,,,,6xsn_H_L_C,False
4hc1,M,N,0,B,protein,,mucosal addressin cell adhesion molecule 1,IMMUNE SYSTEM,09/28/12,Crystal structure of a loop deleted mutant of human MAdCAM-1 D1D2 complexed with Fab 10G3,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Springer, T., Yu, Y., Zhu, J.",2.871,X-RAY DIFFRACTION,0.253,0.200,False,True,IGHV3,IGKV14,Kappa,,,,,,4hc1_M_N_B,False
7xsc,A,B,0,E,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,05/24/23,Crystal structure of SARS-CoV-2 spike receptor binding domain bound with P5S-2B10,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Wang, X., Wang, Z., Lin, Z.",2.88,X-RAY DIFFRACTION,0.250,0.200,False,True,IGHV3,IGKV1,Kappa,,,,,,7xsc_A_B_E,False
7kqe,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,11/15/20,SARS-CoV-2 spike glycoprotein:Fab 3D11 complex,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Asarnow, D., Charles, C., Cheng, Y.",2.88,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGLV6,Lambda,,,,,,7kqe_H_L_A,False
8bg1,G,H,0,I,protein,,spike protein s1,PROTEIN BINDING,11/08/23,Crystal structure of the SARS-CoV-2 S RBD in complex with pT1511 scFV,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Hansen, G., Ssebyatika, G.L., Krey, T.",2.88,X-RAY DIFFRACTION,0.244,0.202,True,True,IGHV3,IGKV2,Kappa,,,,,,8bg1_G_H_I,False
2arj,H,L,0,Q,protein,,t-cell surface glycoprotein cd8 alpha chain,Immune System,08/19/05,CD8alpha-alpha in complex with YTS 105.18 Fab,MUS MUSCULUS; RATTUS NORVEGICUS,rattus norvegicus,rattus norvegicus,mus musculus,"Shore, D.A., Teyton, L., Dwek, R.A., Rudd, P.M., Wilson, I.A.",2.88,X-RAY DIFFRACTION,0.277,0.220,False,False,IGHV2,IGKV6,Kappa,,,,,,2arj_H_L_Q,False
8k3c,C,D,0,B,protein,,glycoprotein g,VIRAL PROTEIN/IMMUNE SYSTEM,05/01/24,Nipah virus Attachment glycoprotein with 41-6 antibody fragment,Henipavirus nipahense; Homo sapiens,homo sapiens,homo sapiens,henipavirus nipahense,"Sun, M.M.",2.88,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV1,Lambda,,,,,,8k3c_C_D_B,False
9ind,H,L,0,B,protein,,integrin beta-8,SIGNALING PROTEIN/IMMUNE SYSTEM,01/22/25,Integrin alpha-v beta-8 in complex with the Fab of 130H2,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Sun, H., Zheng, Q., Gui, X.",2.88,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,9ind_H_L_B,False
6ye3,A,B,0,C,protein,,interleukin-2,PROTEIN BINDING,03/23/20,IL-2 in complex with a Fab fragment from UFKA-20,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Karakus, U., Mittl, P., Boyman, O.",2.89,X-RAY DIFFRACTION,0.283,0.215,False,True,IGHV5,IGKV8,Kappa,,,,,,6ye3_A_B_C,False
9mns,H,L,0,E,protein,,envelope glycoprotein e2,VIRAL PROTEIN/IMMUNE SYSTEM,01/14/26,Structure of Hepatitis C virus envelope glycoprotein E2 core from genotype 6a bound to broadly neutralizing antibody RM1-36,Macaca mulatta; Recombinant Hepatitis C virus HK6a/JFH-1,macaca mulatta,macaca mulatta,recombinant hepatitis c virus hk6a/jfh-1,"Nguyen, T.K.Y., Stanfield, R.L., Wilson, I.A.",2.89,X-RAY DIFFRACTION,0.250,0.232,False,True,IGHV1,IGKV1,Kappa,,,,,,9mns_H_L_E,False
8u1c,H,L,0,A,protein,,neuraminidase,HYDROLASE,03/27/24,A mechanistic understanding of protective influenza B neuraminidase mAbs at the airway interface,Homo sapiens; Influenza B virus (B/Iowa/06/2017),homo sapiens,homo sapiens,influenza b virus (b/iowa/06/2017),"Ferguson, J.A., Oeverdieck, S., Ward, A.B.",2.89,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGKV3,Kappa,,,,,,8u1c_H_L_A,False
9gwt,H,L,0,P,protein,,isoform 1 of cell surface glycoprotein cd200 receptor 1,ANTITUMOR PROTEIN,10/23/24,crystal structure of 23ME-00610 Fab in complex with human CD200R1,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Huang, Y.M., Ganichkin, O.M.",2.89,X-RAY DIFFRACTION,0.236,0.202,False,True,IGHV4,IGKV3,Kappa,,,,,,9gwt_H_L_P,False
7ceb,C,D,0,B,protein,,integrin beta-1,CELL ADHESION/IMMUNE SYSTEM,06/22/20,Crystal structure of alpha6beta1 integrin headpiece,HOMO SAPIENS; MUS MUSCULUS,"mus musculus, homo sapiens","mus musculus, homo sapiens",homo sapiens,"Arimori, T., Takagi, J.",2.89,X-RAY DIFFRACTION,0.249,0.207,False,True,IGHV5,IGKV4,Kappa,,,,,,7ceb_C_D_B,False
9kep,D,A,0,B,protein,,rabv-g-phd-fd,VIRAL PROTEIN,04/23/25,RABV-G-PHD-FD/NM57-scFv,Homo sapiens; Rabies virus CVS-11,homo sapiens,homo sapiens,rabies virus cvs-11,"Lu, G., Yang, F., Keqing, Y., Lin, S.",2.89,X-RAY DIFFRACTION,0.281,0.233,True,True,IGHV1,IGLV2,Lambda,,,,,,9kep_D_A_B,False
5tzt,H,L,0,C,protein,,leukocyte surface antigen cd47,IMMUNE SYSTEM,11/22/16,Crystal structure of human CD47 ECD bound to Fab of C47B161,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Cardoso, R.M.F.",2.89,X-RAY DIFFRACTION,0.328,0.257,False,True,IGHV1,IGKV1,Kappa,2.87e-09,-11.653534133424982,SPR,,TBD,5tzt_H_L_C,False
8zd5,K,L,0,J,protein,,superoxide dismutase [cu-zn],METAL BINDING PROTEIN,11/27/24,Crystal structure of E40K variant of Cu/Zn-superoxide dismutase from dog (Canis familiaris) in the holo form complexed with 22E1 Fv-clasp,Canis lupus familiaris; Mus musculus,mus musculus,mus musculus,canis lupus familiaris,"Shino, Y., Furukawa, Y., Muraki, N.",2.89,X-RAY DIFFRACTION,0.249,0.201,False,True,IGHV14,IGKV14,Kappa,,,,,,8zd5_K_L_J,False
8zd5,B,C,0,A,protein,,superoxide dismutase [cu-zn],METAL BINDING PROTEIN,11/27/24,Crystal structure of E40K variant of Cu/Zn-superoxide dismutase from dog (Canis familiaris) in the holo form complexed with 22E1 Fv-clasp,Canis lupus familiaris; Mus musculus,mus musculus,mus musculus,canis lupus familiaris,"Shino, Y., Furukawa, Y., Muraki, N.",2.89,X-RAY DIFFRACTION,0.249,0.201,False,True,IGHV14,IGKV14,Kappa,,,,,,8zd5_B_C_A,False
5a3i,C,D,0,A,protein,,hemagglutinin,VIRAL PROTEIN,06/01/15,Crystal Structure of a Complex formed between FLD194 Fab and Transmissible Mutant H5 Haemagglutinin,INFLUENZA A VIRUS (A/VIETNAM/1203/2004(H5N1)); HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus (a/vietnam/1203/2004(h5n1)),"Xiong, X., Corti, D., Liu, J., Pinna, D., Foglierini, M., Calder, L.J., Martin, S.R., Lin, Y.P., Walker, P.A., Collins, P.J., Monne, I., Suguitan Jr, A.L., Santos, C., Temperton, N.J., Subbarao, K., Lanzavecchia, A., Gamblin, S.J., Skehel, J.J.",2.89,X-RAY DIFFRACTION,0.277,0.244,False,False,IGHV5,IGKV2,Kappa,,,,,,5a3i_C_D_A,False
8dgx,H,L,0,C,peptide,,spike protein s2',IMMUNE SYSTEM,01/25/23,Crystal structure of MERS-CoV spike stem helix peptide in complex with Fab of broadly neutralizing antibody CC68.109 isolated from a vaccinated COVID-19 convalescent,Homo sapiens; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,middle east respiratory syndrome-relatedcoronavirus (isolate united kingdom/h123990006/2012) ,"Liu, H., Wilson, I.A.",2.89,X-RAY DIFFRACTION,0.280,0.233,False,True,IGHV1,IGKV3,Kappa,,,,,,8dgx_H_L_C,False
4np4,I,M,0,A,protein,,toxin b,IMMUNE SYSTEM,11/20/13,Clostridium difficile toxin B CROP domain in complex with FAB domains of neutralizing antibody bezlotoxumab,CLOSTRIDIUM DIFFICILE; HOMO SAPIENS,homo sapiens,homo sapiens,clostridium difficile,"Orth, P., Xiao, L., Hernandez, L.D., Reichert, P., Sheth, P., Beaumont, M., Murgolo, N., Ermakov, G., DiNunzio, E., Racine, F., Karczewski, J., Secore, S., Ingram, R.N., Mayhood, T., Strickland, C., Therien, A.G.",2.89,X-RAY DIFFRACTION,0.232,0.198,False,False,IGHV5,IGKV3,Kappa,1.9e-11,-14.626397031011075,SPR,,TBD,4np4_I_M_A,False
7wph,E,D,0,A,protein,,spike protein s1,PROTEIN BINDING,01/23/22,SARS-CoV2 RBD bound to Fab06,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Lin, J.Q., El Sahili, A., Lescar, J.",2.89,X-RAY DIFFRACTION,0.269,0.229,False,True,IGHV4,IGLV2,Lambda,,,,,,7wph_E_D_A,False
8tfl,H,L,0,B,protein,,ricin b chain,TOXIN,04/17/24,Ricin in complex with Fab SylH3,Mus musculus; Ricinus communis,mus musculus,mus musculus,ricinus communis,"Rudolph, M.J., Mantis, N.",2.89,X-RAY DIFFRACTION,0.287,0.233,False,True,IGHV1,IGKV19,Kappa,,,,,,8tfl_H_L_B,False
8el2,H,L,0,A,protein,,spike protein s1,ANTIVIRAL PROTEIN/IMMUNE SYSTEM,07/19/23,SARS-CoV-2 RBD bound to neutralizing antibody Fab ICO-hu23,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Besaw, J.E., Kuo, A., Morizumi, T., Ernst, O.P.",2.89,X-RAY DIFFRACTION,0.282,0.239,False,True,IGHV1,IGLV2,Lambda,,,,,,8el2_H_L_A,False
5f9w,H,L,0,G,protein,,clade a/e 93th057 hiv-1 gp120 core,IMMUNE SYSTEM,12/10/15,Crystal structure of broadly neutralizing VH1-46 germline-derived CD4-binding site-directed antibody CH235 in complex with HIV-1 clade A/E 93TH057 gp120,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Chen, L., Zhou, T., Kwong, P.D.",2.8911,X-RAY DIFFRACTION,0.232,0.180,False,True,IGHV1,IGKV3,Kappa,,,,,,5f9w_H_L_G,False
5xwd,H,D,0,A,protein,,epidermal growth factor receptor,SIGNALING PROTEIN,06/29/17,Crystal structure of the complex of 059-152-Fv and EGFR-ECD,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Matsuda, T., Ito, T., Shirouzu, M.",2.894,X-RAY DIFFRACTION,0.331,0.277,False,True,IGHV4,IGLV3,Lambda,5.900000000000001e-09,-11.22656650399949,SPR,,TBD,5xwd_H_D_A,False
6i8s,E,I,0,A,protein,,plasminogen activator inhibitor 1,BLOOD CLOTTING,11/21/18,Discovery and characterisation of an antibody that selectively modulates the inhibitory activity of plasminogen activator inhibitor-1,HOMO SAPIENS; ESCHERICHIA COLI,,,homo sapiens,"Vousden, K.A., Lundqvist, T., Popovic, B.",2.9,X-RAY DIFFRACTION,0.243,0.219,False,True,IGHV1,IGKV1,Kappa,,,,,,6i8s_E_I_A,False
6ss4,H,L,0,A,protein,,unknown,PROTEIN BINDING,09/06/19,Structure of arginase-2 in complex with the inhibitory human antigen-binding fragment Fab C0021181,HOMO SAPIENS,,,,"Burschowsky, D., Addyman, A., Fiedler, S., Groves, M., Haynes, S., Seewooruthun, C., Carr, M.",2.9,X-RAY DIFFRACTION,0.318,0.266,False,False,IGHV3,IGLV1,Lambda,,,,,,6ss4_H_L_A,False
6u3i,H,L,0,A,protein,,proprotein convertase subtilisin/kexin type 9,HYDROLASE/HYDROLASE INHIBITOR/IMMUNE SYSTEM,08/21/19,Design of organo-peptides as bipartite PCSK9 antagonists,HOMO SAPIENS; MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Ultsch, M.H., Kirchhofer, D.",2.9,X-RAY DIFFRACTION,0.217,0.179,False,True,IGHV1,IGKV6,Kappa,,,,,,6u3i_H_L_A,False
3hi1,B,A,0,J,protein,,glycoprotein 120,STRUCTURAL PROTEIN/Immune System,05/18/09,Structure of HIV-1 gp120 (core with V3) in Complex with CD4-Binding-Site Antibody F105,HUMAN IMMUNODEFICIENCY VIRUS TYPE 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus type 1,"Kwon, Y.D., Chen, L., Zhou, T., Wu, X., O'Dell, S., Cavacini, L., Hessell, A.J., Pancera, M., Tang, M., Xu, L., Yang, Z., Zhang, M.-Y., Arthos, J., Burton, D.R., Dimitrov, D., Nabel, G.J., Posner, M., Sodroski, J., Wyatt, R., Mascola, J.R., Kwong, P.D.",2.9,X-RAY DIFFRACTION,0.243,0.202,False,False,IGHV4,IGKV3,Kappa,1.12e-08,-10.84,SPR,,19965434,3hi1_B_A_J,False
5vyf,B,A,0,C,protein,,"chimera of major allergen i polypeptide chain 2,majorallergen i polypeptide chain 1 ",IMMUNE SYSTEM,05/25/17,Structure of single chain Fel d 1 bound to a neutralizing antibody,MUS MUSCULUS; FELIS CATUS,mus musculus,mus musculus,felis catus,"Franklin, M.C.",2.9,X-RAY DIFFRACTION,0.259,0.225,False,True,IGHV3,IGKV1,Kappa,1.87e-10,-13.271582589129338,SPR,,TBD,5vyf_B_A_C,False
7ki4,G,F,0,E,protein,,fusion glycoprotein f0,VIRAL PROTEIN/IMMUNE SYSTEM,10/23/20,Structure of the NiV F glycoprotein in complex with the 12B2 neutralizing antibody,NIPAH VIRUS; MUS MUSCULUS,mus musculus,mus musculus,nipah virus,"Dang, H.V., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler, D.",2.9,ELECTRON MICROSCOPY,,,False,True,IGHV2,IGKV12,Kappa,,,,,,7ki4_G_F_E,False
6b9j,H,L,0,X,protein,,imv membrane protein,VIRAL PROTEIN/immune system,10/10/17,Structure of vaccinia virus D8 protein bound to human Fab vv138,VACCINIA VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,vaccinia virus,"Zajonc, D.M.",2.9,X-RAY DIFFRACTION,0.269,0.241,False,False,IGHV1,IGKV3,Kappa,3.5e-10,-12.900199280360685,SPR,,TBD,6b9j_H_L_X,False
8wre,H,L,0,A,protein,,synaptic vesicular amine transporter,MEMBRANE PROTEIN,09/25/24,Transporter bound with dopamine,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Im, D., Iwata, S.",2.9,ELECTRON MICROSCOPY,,,False,False,IGHV1,IGKV6,Kappa,,,,,,8wre_H_L_A,False
5xxy,H,L,0,A,protein,,programmed cell death 1 ligand 1,IMMUNE SYSTEM,07/05/17,Complex structure of PD-L1 with atezolizumab Fab,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Zhou, A., Zhang, F.",2.9,X-RAY DIFFRACTION,0.295,0.236,False,True,IGHV3,IGKV1,Kappa,9.96e-09,-10.916327402549168,ELISA,,TBD,5xxy_H_L_A,False
8fan,A,B,0,P,peptide,,circumsporozoite protein kqpa peptide,IMMUNE SYSTEM,11/01/23,Crystal structure of Ky15.1 Fab in complex with circumsporozoite protein KQPA peptide,Mus musculus; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,plasmodium falciparum,"Burn Aschner, C., Thai, E., Julien, J.P.",2.9,X-RAY DIFFRACTION,0.250,0.215,False,True,IGHV3,IGKV1,Kappa,,,,,,8fan_A_B_P,False
8iuy,B,C,0,A,protein,,hemagglutinin,MEMBRANE PROTEIN/IMMUNE SYSTEM,04/24/24,H7N9 HA-1H9 Fab,H7N9 subtype; Mus musculus,mus musculus,mus musculus,h7n9 subtype,"Zhao, B.B., Sun, Z.Z.",2.9,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV15,Kappa,,,,,,8iuy_B_C_A,False
6v8z,J,K,0,G,protein,,envelope glycoprotein gp120,VIRAL PROTEIN/IMMUNE SYSTEM,12/12/19,VRC03 and 10-1074 Bound BG505 F14 HIV-1 SOSIP Envelope Trimer Structure,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Henderson, R., Acharya, P.",2.9,ELECTRON MICROSCOPY,,,False,True,IGHV4,unknown,unknown,,,,,,6v8z_J_K_G,False
6woz,B,C,0,A,protein,,reticulocyte binding protein 2b,CELL INVASION,04/26/20,Plasmodium vivax reticulocyte binding protein 2b (PvRBP2b) bound to human monoclonal antibody 251249,PLASMODIUM VIVAX (STRAIN SALVADOR I); HOMO SAPIENS,homo sapiens,homo sapiens,plasmodium vivax (strain salvador i),"Chan, L.J., Dietrich, M.H., Tham, W.H.",2.9,X-RAY DIFFRACTION,0.258,0.211,False,True,IGHV3,IGKV3,Kappa,,,,,,6woz_B_C_A,False
8wsq,A,B,0,F,protein,,fusion glycoprotein f0,ANTIVIRAL PROTEIN/VIRAL PROTEIN,11/15/23,A protective human antibody against respiratory syncytial virus by targeting a prefusion epitope across sites IV and V of the viral fusion glycoprotein.,Homo sapiens; Respiratory syncytial virus,homo sapiens,homo sapiens,respiratory syncytial virus,"Xu, S.Y., Chai, Y.",2.9,X-RAY DIFFRACTION,0.280,0.247,False,True,IGHV3,IGLV1,Lambda,,,,,,8wsq_A_B_F,False
8sgi,H,L,0,A,protein,,sodium/calcium exchanger 1,TRANSPORT PROTEIN,04/24/24,Cryo-EM structure of human NCX1 in complex with SEA0400,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Xue, J., Jiang, Y.",2.9,ELECTRON MICROSCOPY,,,False,False,IGHV1,IGLV1,Lambda,,,,,,8sgi_H_L_A,False
8tlm,A,B,0,C,protein,,"c-c chemokine receptor type 8, green fluorescent proteinfusion ",STRUCTURAL PROTEIN,12/20/23,Structure of a class A GPCR/Fab complex,Aequorea victoria; Homo sapiens; Oryctolagus cuniculus,oryctolagus cuniculus,oryctolagus cuniculus,"homo sapiens, aequorea victoria","Sun, D., Johnson, M., Masureel, M.",2.9,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,8tlm_A_B_C,False
6jjp,A,B,0,C,protein,,programmed cell death protein 1,IMMUNE SYSTEM,02/26/19,Crystal structure of Fab of a PD-1 monoclonal antibody MW11-h317 in complex with PD-1,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Wang, M., Wang, J., Wang, R., Jiao, S., Wang, S., Zhang, J., Zhang, M.",2.9,X-RAY DIFFRACTION,0.247,0.207,False,True,IGHV3,IGKV2,Kappa,,,,,,6jjp_A_B_C,False
7lue,I,M,0,B,protein,,fusion glycoprotein f0,VIRAL PROTEIN/IMMUNE SYSTEM,02/22/21,Prefusion RSV F glycoprotein bound by neutralizing site V-directed antibody ADI-14442,RESPIRATORY SYNCYTIAL VIRUS A2; HOMO SAPIENS,homo sapiens,homo sapiens,respiratory syncytial virus a2,"Gilman, M.S.A., McLellan, J.S.",2.9,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV2,Kappa,,,,,,7lue_I_M_B,False
7fjs,C,A,0,B,protein,,spike protein s1,IMMUNE SYSTEM/VIRAL PROTEIN,08/04/21,Crystal structure of T6 Fab bound to theSARS-CoV-2 RBD of B.1.351,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Wang, X., Zhang, L., Zhang, S., Liang, Q.",2.9,X-RAY DIFFRACTION,0.285,0.217,False,True,IGHV1,IGKV8,Kappa,,,,,,7fjs_C_A_B,False
8hgl,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,10/25/23,SARS-CoV-2 spike in complex with neutralizing antibody NIV-11,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Moriyama, S., Anraku, Y., Muranishi, S., Adachi, Y., Kuroda, D., Higuchi, Y., Kotaki, R., Tonouchi, K., Yumoto, K., Suzuki, T., Kita, S., Fukuhara, H., Kuroda, Y., Yamamoto, T., Onodera, T., Fukushi, S., Maeda, K., Nakamura-Uchiyama, F., Hashiguchi, T., Hoshino, A., Maenaka, K., Takahashi, Y.",2.9,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,8hgl_H_L_A,False
7e86,A,B,0,C,protein,,spike protein s1,"VIRAL PROTEIN,IMMUNE SYSTEM",03/01/21,Crystal structure of the SARS-CoV-2 S RBD in complex with BD-508 Fab,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Gao, C., Xiao, J.",2.9,X-RAY DIFFRACTION,0.255,0.196,False,True,IGHV3,IGKV1,Kappa,,,,,,7e86_A_B_C,False
1fsk,F,E,0,D,protein,,major pollen allergen bet v 1-a,IMMUNE SYSTEM,09/11/00,COMPLEX FORMATION BETWEEN A FAB FRAGMENT OF A MONOCLONAL IGG ANTIBODY AND THE MAJOR ALLERGEN FROM BIRCH POLLEN BET V 1,BETULA PENDULA; MUS MUSCULUS,mus musculus,mus musculus,betula pendula,"Mirza, O., Henriksen, A., Ipsen, H., Larsen, J., Wissenbach, M., Spangfort, M., Gajhede, M.",2.9,X-RAY DIFFRACTION,0.285,0.253,False,True,IGHV1,IGKV6,Kappa,2.4e-10,-13.12373995487015,Unknown,,TBD,1fsk_F_E_D,False
8tp5,E,F,0,C,protein,,hemagglutinin ha1 chain,VIRAL PROTEIN/Immune System,10/11/23,H1 hemagglutinin (NC99) in complex with RBS-targeting Fab 1-1-1E04,Homo sapiens; Influenza A virus (A/New Caledonia/20/1999(H1N1)),homo sapiens,homo sapiens,influenza a virus (a/newcaledonia/20/1999(h1n1)) ,"Yang, Y.R., Han, J., Perrett, H.R., Ward, A.B.",2.9,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV1,Lambda,,,,,,8tp5_E_F_C,False
3vi4,F,E,0,B,protein,,integrin beta-1,CELL ADHESION/IMMUNE SYSTEM,09/21/11,Crystal structure of alpha5beta1 integrin headpiece in complex with RGD peptide,HOMO SAPIENS; MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Nagae, M., Nogi, T., Takagi, J.",2.9,X-RAY DIFFRACTION,0.275,0.215,False,True,IGHV1,IGKV2,Kappa,,,,,,3vi4_F_E_B,False
7n8q,H,L,0,G,protein,,clade a/e 93th057 hiv-1 gp120 core,IMMUNE SYSTEM,06/15/21,Rhesusized RV305 DH677.3 Fab bound to Clade A/E 93TH057 HIV-1 gp120 core.,HUMAN IMMUNODEFICIENCY VIRUS 1; MACACA MULATTA; SYNTHETIC CONSTRUCT,macaca mulatta,macaca mulatta,human immunodeficiency virus 1,"Tolbert, W.D., Pazgier, M.",2.9,X-RAY DIFFRACTION,0.296,0.255,False,True,IGHV1,IGKV1,Kappa,,,,,,7n8q_H_L_G,False
5erw,A,B,0,C,peptide,,hcv e2 glycoprotein epitope ii,VIRAL PROTEIN/IMMUNE SYSTEM,11/15/15,Structure of HCV E2 glycoprotein antigenic Epitope II bound to the broadly neutralizing antibody HC84-26,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,hepatitis c virus,"Gao, M., Mariuzza, R.",2.9,X-RAY DIFFRACTION,0.258,0.215,False,True,IGHV1,IGLV3,Lambda,,,,,,5erw_A_B_C,False
8r9z,H,L,0,A,protein,,spike protein,VIRAL PROTEIN,06/05/24,S1B domain of the PDCoV spike glycoprotein in complex with the 67B12 and 46E6 antibody Fab fragments,Homo sapiens; Porcine deltacoronavirus,homo sapiens,homo sapiens,porcine deltacoronavirus,"Debski-Antoniak, O., Hurdiss, D.L.",2.9,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8r9z_H_L_A,False
8h07,E,J,0,C,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,05/31/23,SARS-CoV-2 BA.4 variants S ectodomain trimer in complex with neutralizing antibody 10-5B and 6-2C,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Wang, X., Wang, Z.",2.9,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8h07_E_J_C,False
8h07,N,O,0,C,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,05/31/23,SARS-CoV-2 BA.4 variants S ectodomain trimer in complex with neutralizing antibody 10-5B and 6-2C,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Wang, X., Wang, Z.",2.9,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8h07_N_O_C,False
6phc,A,B,0,I,protein,,25 kda ookinete surface antigen,IMMUNE SYSTEM,06/25/19,Pfs25 in complex with the human transmission blocking antibody 2544,PLASMODIUM FALCIPARUM; HOMO SAPIENS,homo sapiens,homo sapiens,plasmodium falciparum,"McLeod, B.R., Julien, J.P.",2.9,X-RAY DIFFRACTION,0.238,0.200,False,True,IGHV3,IGKV2,Kappa,,,,,,6phc_A_B_I,False
6iap,H,L,0,A,protein,,natural cytotoxicity triggering receptor 1,IMMUNE SYSTEM,11/27/18,structure of human NKp46 in complex with antibody NKp46-1 and NKp46-4,HOMO SAPIENS; SYNTHETIC CONSTRUCT,synthetic construct,synthetic construct,homo sapiens,"Roussel, A., Amigues, B.",2.9,X-RAY DIFFRACTION,0.263,0.187,False,True,IGHV1,IGKV1,Kappa,,,,,,6iap_H_L_A,False
3iu3,C,D,0,J,protein,,interleukin-2 receptor alpha chain,IMMUNE SYSTEM,08/29/09,Crystal structure of the Fab fragment of therapeutic antibody Basiliximab in complex with IL-2Ra (CD25) ectodomain,HOMO SAPIENS; SYNTHETIC CONSTRUCT,,,homo sapiens,"Du, J., Yang, H., Wang, J., Ding, J.",2.9,X-RAY DIFFRACTION,0.262,0.215,False,True,IGHV1,IGKV4,Kappa,1.4e-10,-13.44,SPR,25.0,20032294,3iu3_C_D_J,False
9p1m,F,E,0,B,protein,,5'-nucleotidase,HYDROLASE,12/24/25,Cryo-EM structure of CD73 in complex with antibody Sym024,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Bansia, H., Armbruster, E., Des Georges, A.",2.9,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,9p1m_F_E_B,False
9p1m,D,C,0,A,protein,,5'-nucleotidase,HYDROLASE,12/24/25,Cryo-EM structure of CD73 in complex with antibody Sym024,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Bansia, H., Armbruster, E., Des Georges, A.",2.9,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,9p1m_D_C_A,False
8r9z,B,C,0,A,protein,,spike protein,VIRAL PROTEIN,06/05/24,S1B domain of the PDCoV spike glycoprotein in complex with the 67B12 and 46E6 antibody Fab fragments,Homo sapiens; Porcine deltacoronavirus,homo sapiens,homo sapiens,porcine deltacoronavirus,"Debski-Antoniak, O., Hurdiss, D.L.",2.9,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,8r9z_B_C_A,False
7s0b,A,B,0,F,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,08/30/21,Structure of the SARS-CoV-2 RBD in complex with neutralizing antibody N-612-056,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Tanaka, S., Barnes, C.O., Bjorkman, P.J.",2.9,X-RAY DIFFRACTION,0.260,0.215,False,True,IGHV3,IGKV1,Kappa,,,,,,7s0b_A_B_F,False
7rco,F,E,0,A,protein,,transforming growth factor beta-2,IMMUNE SYSTEM,07/07/21,Crystal structure of human TGF-beta-2 bound to 4A11.V2 Fab,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Yin, J., Lupardus, P.J., Sudhamsu, J.",2.9,X-RAY DIFFRACTION,0.286,0.208,False,True,IGHV3,IGKV1,Kappa,,,,,,7rco_F_E_A,False
9yka,F,G,0,B,protein,,balf4,VIRAL PROTEIN,12/31/25,Cryo-EM structure of post-fusion EBV gB in complex with AMMO2 fab,Homo sapiens; human gammaherpesvirus 4,homo sapiens,homo sapiens,human gammaherpesvirus 4,"Chou, C.W., McCool, R.S., McLellan, J.S.",2.9,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,9yka_F_G_B,False
5usl,H,L,0,X,protein,,imv membrane protein,VIRAL PROTEIN/Immune System,02/13/17,Structure of vaccinia virus D8 protein bound to human Fab vv304,VACCINIA VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,vaccinia virus,"Zajonc, D.M.",2.9,X-RAY DIFFRACTION,0.297,0.247,False,False,IGHV3,IGLV3,Lambda,1.6000000000000003e-11,-14.728215503643929,SPR,,TBD,5usl_H_L_X,False
6iap,E,D,0,A,protein,,natural cytotoxicity triggering receptor 1,IMMUNE SYSTEM,11/27/18,structure of human NKp46 in complex with antibody NKp46-1 and NKp46-4,HOMO SAPIENS; SYNTHETIC CONSTRUCT,synthetic construct,synthetic construct,homo sapiens,"Roussel, A., Amigues, B.",2.9,X-RAY DIFFRACTION,0.263,0.187,False,True,IGHV1,IGKV12,Kappa,,,,,,6iap_E_D_A,False
5b3j,H,L,0,D,protein,,"glutamate receptor ionotropic, nmda 2b",TRANSPORT PROTEIN,03/01/16,Activation of NMDA receptors and the mechanism of inhibition by ifenprodil,RATTUS NORVEGICUS; XENOPUS LAEVIS; MUS MUSCULUS,mus musculus,mus musculus,rattus norvegicus,"Tajima, N., Karakas, E., Grant, T., Simorowski, N., Diaz-Avalos, R., Grigorieff, N., Furukawa, H.",2.9,X-RAY DIFFRACTION,0.302,0.273,False,False,IGHV5,IGKV19,Kappa,,,,,,5b3j_H_L_D,False
9qt3,N,O,0,M,protein,,envelop protein opg153,VIRAL PROTEIN,11/19/25,Structure of vaccinia virus A26 (residues 1-397) in complex with Fab 8M2110,Homo sapiens; Lama glama; Vaccinia virus Western Reserve,homo sapiens,homo sapiens,vaccinia virus western reserve,"Guardado-Calvo, P., Battini, L.",2.9,X-RAY DIFFRACTION,0.236,0.201,False,True,IGHV4,IGKV1,Kappa,,,,,,9qt3_N_O_M,False
4lu5,I,M,0,A,protein,,a33r,IMMUNE SYSTEM,07/24/13,Structure of murine IgG2a A20G2-Fab in complex with vaccinia antigen A33R at the resolution of 2.9 Angstroms,MUS MUSCULUS; VACCINIA VIRUS,mus musculus,mus musculus,vaccinia virus,"Matho, M.H., Schlossman, A.M., Zajonc, D.M.",2.9,X-RAY DIFFRACTION,0.282,0.234,False,True,IGHV5,IGKV1,Kappa,6.59e-11,-13.889525396748654,SPR,,TBD,4lu5_I_M_A,False
5wux,H,L,0,E,protein,,tumor necrosis factor alpha,IMMUNE SYSTEM,12/21/16,TNFalpha-certolizumab Fab,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Heo, Y.S., Lee, J.U.",2.9,X-RAY DIFFRACTION,0.266,0.226,False,True,IGHV3,IGKV1,Kappa,2.74e-11,-14.40948636554907,SPR,,TBD,5wux_H_L_E,False
1cu4,H,L,0,P,peptide,,recognition peptide,IMMUNE SYSTEM,08/20/99,CRYSTAL STRUCTURE OF THE ANTI-PRION FAB 3F4 IN COMPLEX WITH ITS PEPTIDE EPITOPE,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,,"Kanyo, Z.F., Pan, K.M., Williamson, R.A., Burton, D.R., Prusiner, S.B., Fletterick, R.J., Cohen, F.E.",2.9,X-RAY DIFFRACTION,0.268,0.159,False,False,IGHV14,IGKV1,Kappa,,,,,,1cu4_H_L_P,False
4q0x,H,L,0,E,peptide,,envelope glycoprotein e2,IMMUNE SYSTEM/VIRAL PROTEIN,04/02/14,Crystal structure of non-neutralizing antibody in complex with Epitope II of HCV E2,HEPATITIS C VIRUS; MUS MUSCULUS,mus musculus,mus musculus,hepatitis c virus,"Deng, L., Zhang, P.",2.9,X-RAY DIFFRACTION,0.285,0.221,False,False,IGHV1,IGKV1,Kappa,,,,,,4q0x_H_L_E,False
6p67,E,F,0,G,protein,,interleukin-7 receptor subunit alpha,IMMUNE SYSTEM,06/03/19,Crystal Structure of a Complex of human IL-7Ralpha with an anti-IL-7Ralpha 2B8 Fab,MUS MUSCULUS; HOMO SAPIENS,mus musculus,mus musculus,homo sapiens,"Walsh, S.T.R., Kashi, L., Kohnhorst, C.L.",2.9,X-RAY DIFFRACTION,0.266,0.249,False,True,IGHV1,IGKV6,Kappa,,,,,,6p67_E_F_G,False
6p50,H,L,0,C,protein,,interleukin-7 receptor subunit alpha,IMMUNE SYSTEM,05/29/19,Crystal Structure of a Complex of human IL-7Ralpha with an anti-IL-7Ralpha Fab 4A10,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Walsh, S.T.R., Kashi, L., Kohnhorst, C.L.",2.9,X-RAY DIFFRACTION,0.330,0.286,False,False,IGHV1,IGKV19,Kappa,,,,,,6p50_H_L_C,False
9quw,D,C,0,A,protein,,sodium/hydrogen exchanger 9b2,TRANSPORT PROTEIN,05/14/25,Cryo-EM structure of the human NHA2-Fab complex bound to phloretin,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Jung, S., Drew, D.",2.9,ELECTRON MICROSCOPY,,,False,False,IGHV1,IGKV10,Kappa,,,,,,9quw_D_C_A,False
7sa6,H,L,0,A,protein,,factor h-binding protein 2416,IMMUNE SYSTEM,10/05/22,fHbp mutant 2416 bound to Fab JAR5,Mus musculus; Neisseria meningitidis serogroup B,mus musculus,mus musculus,neisseria meningitidis serogroup b,"Chesterman, C., Malito, E., Bottomley, M.J.",2.9,X-RAY DIFFRACTION,0.290,0.249,False,True,IGHV1,IGKV2,Kappa,,,,,,7sa6_H_L_A,False
7sue,H,L,0,C,protein,,nucleoprotein,VIRAL PROTEIN,08/10/22,Crystal Structure of Human Fab S24-188 in the complex with the N-teminal Domain of Nucleocapsid protein from SARS CoV-2,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Kim, Y., Maltseva, N., Tesar, C., Jedrzejczak, R., Dugan, H., Stamper, C., Wilson, P., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)",2.9,X-RAY DIFFRACTION,0.292,0.262,False,True,IGHV1,IGLV2,Lambda,,,,,,7sue_H_L_C,False
7sue,F,E,0,J,protein,,nucleoprotein,VIRAL PROTEIN,08/10/22,Crystal Structure of Human Fab S24-188 in the complex with the N-teminal Domain of Nucleocapsid protein from SARS CoV-2,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Kim, Y., Maltseva, N., Tesar, C., Jedrzejczak, R., Dugan, H., Stamper, C., Wilson, P., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)",2.9,X-RAY DIFFRACTION,0.292,0.262,False,True,IGHV1,IGLV2,Lambda,,,,,,7sue_F_E_J,False
9cfg,H,L,0,A,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,07/02/25,Cryo-EM Refinement of Antibody 19-77 R71V in complex with SARS-CoV-2 HK.3 RBD,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Casner, R.G., Shapiro, L.",2.9,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV3,Kappa,,,,,,9cfg_H_L_A,False
7r40,E,G,0,C,protein,,spike glycoprotein,VIRAL PROTEIN,02/08/22,Structure of the SARS-CoV-2 spike glycoprotein in complex with the 87G7 antibody Fab fragment,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Hurdiss, D.L.",2.9,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV3,Kappa,,,,,,7r40_E_G_C,False
7yms,F,E,0,A,protein,,capsid protein vp1,VIRUS,08/24/22,Cryo-EM structure of Coxsackievirus A16 in complex with a neutralizing antibody 9B5,Coxsackievirus A16,coxsackievirus a16,coxsackievirus a16,coxsackievirus a16,"Cong, Y., Liu, C.X.",2.9,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV12,Kappa,,,,,,7yms_F_E_A,False
1kcr,H,L,0,P,peptide,,ps1 peptide,IMMUNE SYSTEM,11/11/01,CRYSTAL STRUCTURE OF ANTIBODY PC283 IN COMPLEX WITH PS1 PEPTIDE,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,,"Nair, D.T., Singh, K., Sahu, N., Rao, K.V.S., Salunke, D.M.",2.9,X-RAY DIFFRACTION,0.277,0.184,False,False,IGHV3,IGKV6,Kappa,,,,,,1kcr_H_L_P,False
6ute,C,D,0,S,protein,,envelope domain iii,VIRAL PROTEIN,10/29/19,Crystal structure of Z032 Fab in complex with WNV EDIII,HOMO SAPIENS; WEST NILE VIRUS,homo sapiens,homo sapiens,west nile virus,"Esswein, S.R., Gristick, H.B., Keeffe, J.R., Bjorkman, P.J.",2.9,X-RAY DIFFRACTION,0.264,0.223,False,True,IGHV3,IGKV1,Kappa,,,,,,6ute_C_D_S,False
9md5,G,K,0,D,protein,,neuraminidase,VIRAL PROTEIN/IMMUNE SYSTEM,08/27/25,Neuraminidase in complex with mAb 6-23.2,Influenza A virus; Mus musculus,mus musculus,mus musculus,influenza a virus,"Ferguson, J.A., Raghavan, S.S.R., Ward, A.B.",2.9,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGKV6,Kappa,,,,,,9md5_G_K_D,False
2uud,H,L,0,S,peptide,,nq10-1.12 anti-phox antibody,IMMUNE SYSTEM,03/02/07,Crystal structure of the TEPC15-Vk45.1 anti-2-phenyl-5-oxazolone NQ10- 1.12 scFv in complex with the hapten,MUS MUSCULUS,mus musculus,mus musculus,mus musculus,"Scotti, C., Gherardi, E.",2.9,X-RAY DIFFRACTION,0.297,0.228,False,True,IGHV7,IGKV1,Kappa,,,,,,2uud_H_L_S,False
9md3,G,K,0,D,protein,,neuraminidase,VIRAL PROTEIN/IMMUNE SYSTEM,08/27/25,Neuraminidase in complex with mAb 5-12,Influenza A virus; Mus musculus,mus musculus,mus musculus,influenza a virus,"Ferguson, J.A., Raghavan, S.S.R., Ward, A.B.",2.9,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGKV3,Kappa,,,,,,9md3_G_K_D,False
9bjg,H,L,0,A,protein,,apical membrane antigen 1,STRUCTURAL PROTEIN,03/12/25,Crystal structure of broadly neutralizing human monoclonal antibody 75B10 in complex with AMA1,Homo sapiens; Plasmodium falciparum 3D7,homo sapiens,homo sapiens,plasmodium falciparum 3d7,"Patel, P.N., Tang, W.K., Tolia, N.H.",2.9,X-RAY DIFFRACTION,0.232,0.199,False,True,IGHV3,IGKV1,Kappa,,,,,,9bjg_H_L_A,False
8v9d,K,L,0,C,protein,,aquaporin-4,TRANSPORT PROTEIN/IMMUNE SYSTEM,12/11/24,Structure of human AQP4 with a pathogenic autoantibody - rAB 186,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Gupta, M., Khandelwal, N.K., Stroud, R.M.",2.9,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV3,Kappa,,,,,,8v9d_K_L_C,False
8eb2,N,O,0,G,protein,,hla-a*02,IMMUNE SYSTEM,11/30/22,Structure of HLA-A*02:01 in complex with NY-ESO-1 peptide and PA2.1 Fab,Homo sapiens; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,homo sapiens,"Jette, C.J., West, A.P.",2.9,X-RAY DIFFRACTION,0.284,0.239,False,True,IGHV1,IGKV1,Kappa,,,,,,8eb2_N_O_G,False
6uvo,H,L,0,D,peptide,,major surface glycoprotein g,"VIRAL PROTEIN, IMMUNE SYSTEM",11/03/19,Structure of antibody 3G12 bound to the central conserved domain of RSV G,HOMO SAPIENS; HUMAN RESPIRATORY SYNCYTIAL VIRUS A (STRAIN A2),homo sapiens,homo sapiens,human respiratory syncytial virus a (straina2) ,"Fedechkin, S.O., George, N.L., Nunez Castrejon, A.M., Dillen, J., Kauvar, L.M., DuBois, R.M.",2.9,X-RAY DIFFRACTION,0.209,0.193,False,True,IGHV4,IGKV3,Kappa,,,,,,6uvo_H_L_D,False
9dvd,H,L,0,A,protein,,glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,10/15/25,Cryo EM structure of Hendra G ectodomain in complex with Ephrin-B2 and Fab HENV-270,Henipavirus hendraense; Homo sapiens,homo sapiens,homo sapiens,henipavirus hendraense,"Binshtein, E., Crowe, J.E.",2.9,ELECTRON MICROSCOPY,,,False,True,IGHV7,IGLV3,Lambda,,,,,,9dvd_H_L_A,False
6lxj,M,N,0,D,protein,,neuraminidase,HYDROLASE/IMMUNE SYSTEM,02/11/20,Crystal structure of human Z2B3 Fab in complex with influenza virus neuraminidase from A/Anhui/1/2013 (H7N9),INFLUENZA A VIRUS (A/ANHUI/1-BALF_RG44/2013(H7N9)); HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus (a/anhui/1-balf_rg44/2013(h7n9)) ,"Jiang, H., Peng, W., Qi, J., Chai, Y., Song, H., Shi, Y., Gao, G.F., Wu, Y.",2.903,X-RAY DIFFRACTION,0.241,0.193,False,True,IGHV1,IGLV2,Lambda,,,,,,6lxj_M_N_D,False
6lgw,A,B,0,E,protein,,"glycoprotein,glycoprotein,glycoprotein",VIRAL PROTEIN,12/06/19,Structure of Rabies virus glycoprotein in complex with neutralizing antibody 523-11 at acidic pH,MUS MUSCULUS; RABIES LYSSAVIRUS,mus musculus,mus musculus,rabies lyssavirus,"Yang, F.L., Lin, S., Ye, F., Yang, J., Qi, J.X., Chen, Z.J., Lin, X., Wang, J.C., Yue, D., Cheng, Y.W., Chen, Z.M., Chen, H., You, Y., Zhang, Z.L., Yang, Y., Yang, M., Sun, H.L., Li, Y.H., Cao, Y., Yang, S.Y., Wei, Y.Q., Gao, G.F., Lu, G.W.",2.9037,X-RAY DIFFRACTION,0.268,0.218,False,True,IGHV1,IGKV5,Kappa,,,,,,6lgw_A_B_E,False
4jpw,H,L,0,G,protein,,hiv-1 clade a/e strain 73th057 gp120 with mutation h375s,viral protein/immune system,03/19/13,Crystal structure of broadly and potently neutralizing antibody 12a21 in complex with hiv-1 strain 93th057 gp120 mutant,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Acharya, P., Luongo, T., Zhou, T., Kwong, P.D.",2.904,X-RAY DIFFRACTION,0.265,0.206,False,True,IGHV1,IGKV1,Kappa,,,,,,4jpw_H_L_G,False
6t9d,H,L,0,C,protein,,unknown,IMMUNE SYSTEM,10/28/19,Crystal structure of a bispecific DutaFab in complex with human VEGF121,HOMO SAPIENS,,,,"Kimbung, R., Logan, D.T., Beckmann, R., Jensen, K., Speck, J., Fenn, S., Kettenberger, H.",2.905,X-RAY DIFFRACTION,0.280,0.212,False,False,IGHV3,IGKV1,Kappa,,,,,,6t9d_H_L_C,False
5v7j,D,E,0,B,protein,,envelope glycoprotein gp160,VIRAL PROTEIN/IMMUNE SYSTEM,03/20/17,"Crystal Structure at 3.7 A Resolution of Glycosylated HIV-1 Clade A BG505 SOSIP.664 Prefusion Env Trimer with Four Glycans (N197, N276, N362, and N462) removed in Complex with Neutralizing Antibodies 3H+109L and 35O22.",HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Stewart-Jones, G.B.E., Zhou, T., Kwong, P.D.",2.907,X-RAY DIFFRACTION,0.339,0.316,False,True,unknown,unknown,unknown,,,,,,5v7j_D_E_B,False
7yrf,F,E,0,C,protein,,capsid protein vp3,STRUCTURAL PROTEIN,09/14/22,Cryo-EM structure of compact CA16 empty particle in complex with a neutralizing antibody 8C4,Coxsackievirus A16,coxsackievirus a16,coxsackievirus a16,coxsackievirus a16,"Cong, Y., Liu, C.X.",2.91,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV13,Kappa,,,,,,7yrf_F_E_C,False
8sit,Q,S,0,D,protein,,spike protein s1,IMMUNE SYSTEM,03/13/24,Crystal structure of SARS-CoV-2 spike receptor-binding domain in complex with broadly neutralizing antibody CC84.24 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Liu, H., Wilson, I.A.",2.91,X-RAY DIFFRACTION,0.309,0.261,False,True,IGHV3,IGLV3,Lambda,,,,,,8sit_Q_S_D,False
9jik,H,L,0,A,protein,,pro-secreted protein orf2,VIRAL PROTEIN/IMMUNE SYSTEM,07/23/25,Rat hepatitis E virus capsid protein E2s domain in complex with Fab C127,Homo sapiens; Rocahepevirus ratti,homo sapiens,homo sapiens,rocahepevirus ratti,"Liu, L., Zheng, Q., Li, S.",2.91,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV1,Lambda,,,,,,9jik_H_L_A,False
6mg7,H,L,0,G,protein,,clade a/e 93th057 hiv-1 gp120 core,VIRAL PROTEIN/IMMUNE SYSTEM,09/13/18,Crystal structure of the RV144 C1-C2 specific antibody CH54 Fab in complex with HIV-1 CLADE A/E GP120 and M48U1,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Van, V., Tolbert, W.D., Pazger, M.",2.91,X-RAY DIFFRACTION,0.307,0.250,False,True,IGHV1,IGKV1,Kappa,,,,,,6mg7_H_L_G,False
6s8j,P,O,0,C,protein,,envelope glycoprotein 1,VIRAL PROTEIN,07/10/19,Structure of ZEBOV GP in complex with 5T0180 antibody,HOMO SAPIENS; EBOLA VIRUS,homo sapiens,homo sapiens,ebola virus,"Diskin, R., Cohen-Dvashi, H.",2.91,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV1,Lambda,,,,,,6s8j_P_O_C,False
4j4p,H,L,0,A,protein,,ig epsilon chain c region,IMMUNE SYSTEM,02/07/13,The complex of human IgE-Fc with two bound Fab fragments,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Drinkwater, N., Sutton, B.J.",2.91,X-RAY DIFFRACTION,0.284,0.236,False,True,IGHV6,IGLV1,Lambda,4e-08,-10.092595930642474,SPR,,TBD,4j4p_H_L_A,False
6wmw,M,N,0,B,protein,,gdnf family receptor alpha-like,IMMUNE SYSTEM,04/21/20,"GFRAL receptor bound with two antibody Fabs (3P10, 25M22)",HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"White, A., Lakshminarasimhan, D., Olland, A., Suto, R.K.",2.91,X-RAY DIFFRACTION,0.290,0.222,False,True,IGHV1,IGKV1,Kappa,,,,,,6wmw_M_N_B,False
6wmw,H,L,0,B,protein,,gdnf family receptor alpha-like,IMMUNE SYSTEM,04/21/20,"GFRAL receptor bound with two antibody Fabs (3P10, 25M22)",HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"White, A., Lakshminarasimhan, D., Olland, A., Suto, R.K.",2.91,X-RAY DIFFRACTION,0.290,0.222,False,True,IGHV9,IGKV3,Kappa,,,,,,6wmw_H_L_B,False
7pr0,G,F,0,D,protein,,spike protein s1,VIRAL PROTEIN,09/20/21,Crystal structure of the receptor binding domain of SARS-CoV-2 Spike glycoprotein in complex with FD-5D Fab,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, D., Ren, J., Stuart, D.I.",2.92,X-RAY DIFFRACTION,0.251,0.214,False,True,IGHV3,IGKV2,Kappa,,,,,,7pr0_G_F_D,False
9leo,A,B,0,H,protein,,attachment glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,10/01/25,LayV-G Head in complex of LayG-1069 and LayG-1133,Langya virus; Mus musculus,mus musculus,mus musculus,langya virus,"Yan, R.H., Wu, S.Y.",2.92,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV6,Kappa,,,,,,9leo_A_B_H,False
5w4l,B,C,0,A,protein,,clade a/e 93th057 hiv-1 gp120 core,VIRAL PROTEIN/IMMUNE SYSTEM,06/12/17,"Crystal structure of the non-neutralizing and ADCC-potent C11-like antibody N12-i3 in complex with HIV-1 clade A/E gp120, the CD4 mimetic M48U1, and the antibody N5-i5.",HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Tolbert, W.D., Gohain, N., Pazgier, M.",2.92,X-RAY DIFFRACTION,0.292,0.231,False,True,IGHV1,IGKV3,Kappa,,,,,,5w4l_B_C_A,False
9leo,C,D,0,H,protein,,attachment glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,10/01/25,LayV-G Head in complex of LayG-1069 and LayG-1133,Langya virus; Mus musculus,mus musculus,mus musculus,langya virus,"Yan, R.H., Wu, S.Y.",2.92,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV12,Kappa,,,,,,9leo_C_D_H,False
9sg2,H,L,0,A,protein,,interleukin-17a,CYTOKINE,10/29/25,Ixekizumab Fab in complex with human IL-17A,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Rondeau, J.-M., Lehmann, S.",2.92,X-RAY DIFFRACTION,0.246,0.192,False,True,IGHV1,IGKV2,Kappa,,,,,,9sg2_H_L_A,False
9p97,H,L,0,A,protein,,integrin alpha-e,CELL ADHESION,09/24/25,CryoEM structure of the closed integrin alphaEbeta7 bound to fab LF61,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Hollis, J.A., Campbell, M.G.",2.92,ELECTRON MICROSCOPY,,,False,True,unknown,unknown,unknown,,,,,,9p97_H_L_A,False
7pr0,C,B,0,A,protein,,spike protein s1,VIRAL PROTEIN,09/20/21,Crystal structure of the receptor binding domain of SARS-CoV-2 Spike glycoprotein in complex with FD-5D Fab,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, D., Ren, J., Stuart, D.I.",2.92,X-RAY DIFFRACTION,0.251,0.214,False,True,IGHV3,IGKV2,Kappa,,,,,,7pr0_C_B_A,False
7ps0,B,C,0,A,protein,,surface glycoprotein,VIRAL PROTEIN,09/22/21,Crystal structure of the receptor binding domain of SARS-CoV-2 beta variant spike glycoprotein in complex with beta-24 Fabs,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, D., Ren, J., Stuart, D.I.",2.92,X-RAY DIFFRACTION,0.271,0.222,False,True,IGHV4,IGLV2,Lambda,,,,,,7ps0_B_C_A,False
7uvi,A,B,0,C,protein,,gametocyte surface protein p230,CELL INVASION/IMMUNE SYSTEM,02/15/23,Pfs230 domain 1 bound by RUPA-55 Fab,Homo sapiens; Plasmodium falciparum,homo sapiens,homo sapiens,plasmodium falciparum,"Ivanochko, D., Newton, J., Julien, J.P.",2.92,X-RAY DIFFRACTION,0.237,0.218,False,True,IGHV3,IGKV3,Kappa,,,,,,7uvi_A_B_C,False
8v5v,b,d,0,E,protein,,variable domain of the light chain from the human antibody6c10 ,VIRAL PROTEIN,12/18/24,"Structure of a SARS-CoV-2 spike S2 subunit in a pre-fusion, open conformation",Homo sapiens; Severe acute respiratory syndrome coronavirus 2; Tequatrovirus T4,homo sapiens,homo sapiens,"severe acute respiratory syndrome coronavirus2, tequatrovirus t4 ","Olmedillas, E., Diaz, R., Hastie, K., Ollmann-Saphire, E.",2.93,ELECTRON MICROSCOPY,,,False,False,IGHV1,IGKV3,Kappa,,,,,,8v5v_b_d_E,False
9hh9,E,D,0,A,protein,,glycoprotein,VIRAL PROTEIN,10/22/25,Cryo-EM structure of VSV-Indiana glycoprotein (MUDD-SUMMERS strain) in its pre-fusion conformation in complex with 8G5F11 Fab,Mus sp.; Vesicular stomatitis virus,mus sp.,mus sp.,vesicular stomatitis virus,"Albertini, A., Minoves, M.J., OuldAli, M., Gaudin, Y., Schoehn, G., Zarkadas, E.",2.93,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV6,Kappa,,,,,,9hh9_E_D_A,False
8ywr,H,L,0,A,protein,,interleukin-6,IMMUNE SYSTEM,11/06/24,Crystal structure of the Fab fragment of the anti-IL-6 antibody 68F2 in complex with a domain-swapped IL-6 dimer,Homo sapiens; Lama glama,lama glama,lama glama,homo sapiens,"Bukhdruker, S., Yudenko, A., Borshchevskiy, V.",2.93,X-RAY DIFFRACTION,0.256,0.214,False,True,IGHV4,IGLV2,Lambda,,,,,,8ywr_H_L_A,False
8yry,H,L,0,A,protein,,receptor tyrosine-protein kinase erbb-3,IMMUNE SYSTEM,06/25/25,HER3 in complex with FAb Hu3f8,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Wang, M., Li, X.",2.93,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV1,Kappa,,,,,,8yry_H_L_A,False
7y0c,A,B,0,R,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,09/28/22,Crystal structure of BD55-1403 and SARS-CoV-2 Omicron RBD,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhang, Z., Xiao, J.",2.94,X-RAY DIFFRACTION,0.278,0.202,False,True,IGHV1,IGKV3,Kappa,,,,,,7y0c_A_B_R,False
8d1t,H,L,0,A,protein,,ubiquitin carboxyl-terminal hydrolase 30,HYDROLASE,02/01/23,Crystal structure of human USP30 in complex with a covalent inhibitor 552 and a Fab,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Song, X., Butler, J., Li, C., Zhang, K., Zhang, D., Hao, Y.",2.94,X-RAY DIFFRACTION,0.294,0.236,False,True,IGHV14,IGKV6,Kappa,,,,,,8d1t_H_L_A,False
8k0d,E,F,0,A,protein,,glycoprotein g,VIRAL PROTEIN,05/01/24,Cryo-EM structure of conformation 2 of complex of Nipah virus attachment G with 1E5 neutralizing antibody,Macaca mulatta; Nipah virus,macaca mulatta,macaca mulatta,nipah virus,"Sun, M.",2.94,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV1,Kappa,,,,,,8k0d_E_F_A,False
8fat,A,B,0,E,peptide,,circumsporozoite protein npdp peptide,IMMUNE SYSTEM,11/01/23,Crystal structure of Ky224 Fab in complex with circumsporozoite protein NPDP peptide,Mus musculus; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,plasmodium falciparum,"Kassardjian, A., Thai, E., Julien, J.P.",2.95,X-RAY DIFFRACTION,0.274,0.224,False,True,IGHV3,IGKV2,Kappa,,,,,,8fat_A_B_E,False
6vmj,B,A,0,Z,protein,,complement factor d,HYDROLASE/IMMUNE SYSTEM,01/28/20,Crystal structure of human Complement Factor D with anti-Factor D Fab 20D12,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Wu, P., Harris, S.F., Eigenbrot, C.",2.95,X-RAY DIFFRACTION,0.265,0.218,False,True,IGHV1,IGKV1,Kappa,,,,,,6vmj_B_A_Z,False
8ker,G,F,0,B,protein,,spike glycoprotein,IMMUNE SYSTEM/VIRAL PROTEIN,08/14/24,Structure of SARS-CoV-2 XBB Variant Spike protein complexed with broadly neutralizing antibody PW5-535,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Sun, L., Mao, Q., Wang, Y.",2.95,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8ker_G_F_B,False
7z0y,H,L,0,R,protein,,spike protein s1,"ANTIVIRAL PROTEIN, IMMUNE SYSTEM",02/23/22,THSC20.HVTR04 Fab bound to SARS-CoV-2 Receptor Binding Domain,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Wibmer, C.K.",2.95,X-RAY DIFFRACTION,0.241,0.219,False,True,IGHV3,IGLV2,Lambda,,,,,,7z0y_H_L_R,False
3ifp,A,B,0,Q,peptide,,amyloid beta a4 protein,IMMUNE SYSTEM,07/24/09,X-ray structure of amyloid beta peptide:antibody (Abeta1-7:12B4) complex,MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Weis, W.I., Feinberg, H., Basi, G.S., Schenk, D.",2.95,X-RAY DIFFRACTION,0.269,0.235,False,True,IGHV8,IGKV1,Kappa,2.45e-08,-10.38,SPR,25.0,19923222,3ifp_A_B_Q,False
7k9z,H,L,0,E,protein,,spike glycoprotein,IMMUNE SYSTEM,09/29/20,Crystal structure of SARS-CoV-2 receptor binding domain in complex with the Fab fragments of neutralizing antibodies 298 and 52,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Newton, J.C., Kucharska, I., Rujas, E., Cui, H., Julien, J.P.",2.95,X-RAY DIFFRACTION,0.287,0.261,False,True,IGHV1,IGKV1,Kappa,,,,,,7k9z_H_L_E,False
9cmc,A,B,0,E,protein,,ara h 2 allergen,ALLERGEN,06/11/25,Crystal structure of the peanut allergen Ara h 2 with two human derived Fab antibodies 22S1 and 23P34,Arachis hypogaea; Homo sapiens,homo sapiens,homo sapiens,arachis hypogaea,"Pedersen, L.C., Mueller, G.A., Min, J.",2.95,X-RAY DIFFRACTION,0.253,0.213,False,True,IGHV3,IGKV2,Kappa,,,,,,9cmc_A_B_E,False
6m58,H,L,0,A,protein,,serum albumin,IMMUNE SYSTEM,03/10/20,Crystal structure of a complex between human serum albumin and the antibody Fab SL335,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,homo sapiens,"Cho, S.Y., Yoon, S.I.",2.95,X-RAY DIFFRACTION,0.242,0.193,False,True,IGHV3,IGKV3,Kappa,,,,,,6m58_H_L_A,False
9l15,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,12/10/25,Structure of SARS-CoV-2 EG.5.1 Variant Spike protein complexed with antibody XGi-203,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Qiu, Y.N., Sun, L.",2.95,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGLV6,Lambda,,,,,,9l15_H_L_A,False
4gms,H,L,0,A,protein,,hemagglutinin ha1 chain,VIRAL PROTEIN/IMMUNE SYSTEM,08/16/12,Crystal structure of heterosubtypic Fab S139/1 in complex with influenza A H3 hemagglutinin,MUS MUSCULUS; INFLUENZA A VIRUS,mus musculus,mus musculus,influenza a virus,"Lee, P.S., Ekiert, D.C., Wilson, I.A.",2.95,X-RAY DIFFRACTION,0.233,0.207,False,True,IGHV1,IGKV6,Kappa,2e-08,-10.503274322962254,BLI,,TBD,4gms_H_L_A,False
6hx4,H,L,0,B,protein,,alpha-1-antitrypsin,PROTEIN BINDING,10/15/18,Fab fragment of a native monomer-selective antibody in complex with alpha-1-antitrypsin,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Elliston, E.L.K., Miranda, E., Perez, J., Jagger, A.M., Lomas, D.A., Irving, J.A.",2.95,X-RAY DIFFRACTION,0.277,0.231,False,False,IGHV5,IGKV3,Kappa,,,,,,6hx4_H_L_B,False
4gms,I,M,0,C,protein,,hemagglutinin ha1 chain,VIRAL PROTEIN/IMMUNE SYSTEM,08/16/12,Crystal structure of heterosubtypic Fab S139/1 in complex with influenza A H3 hemagglutinin,MUS MUSCULUS; INFLUENZA A VIRUS,mus musculus,mus musculus,influenza a virus,"Lee, P.S., Ekiert, D.C., Wilson, I.A.",2.95,X-RAY DIFFRACTION,0.233,0.207,False,True,IGHV1,IGKV6,Kappa,2e-08,-10.503274322962254,BLI,,TBD,4gms_I_M_C,False
3mj9,H,L,0,A,protein,,junctional adhesion molecule-like,IMMUNE SYSTEM,04/12/10,Crystal structure of JAML in complex with the stimulatory antibody HL4E10,MUS MUSCULUS; CRICETULUS MIGRATORIUS,cricetulus migratorius,cricetulus migratorius,mus musculus,"Verdino, P., Wilson, I.A.",2.95,X-RAY DIFFRACTION,0.287,0.222,False,False,IGHV2,IGLV3,Lambda,7.69e-09,-11.06,SPR,25.0,21220118,3mj9_H_L_A,False
9cmc,P,Q,0,T,protein,,ara h 2 allergen,ALLERGEN,06/11/25,Crystal structure of the peanut allergen Ara h 2 with two human derived Fab antibodies 22S1 and 23P34,Arachis hypogaea; Homo sapiens,homo sapiens,homo sapiens,arachis hypogaea,"Pedersen, L.C., Mueller, G.A., Min, J.",2.95,X-RAY DIFFRACTION,0.253,0.213,False,True,IGHV3,IGKV2,Kappa,,,,,,9cmc_P_Q_T,False
9cmc,F,G,0,J,protein,,ara h 2 allergen,ALLERGEN,06/11/25,Crystal structure of the peanut allergen Ara h 2 with two human derived Fab antibodies 22S1 and 23P34,Arachis hypogaea; Homo sapiens,homo sapiens,homo sapiens,arachis hypogaea,"Pedersen, L.C., Mueller, G.A., Min, J.",2.95,X-RAY DIFFRACTION,0.253,0.213,False,True,IGHV3,IGKV2,Kappa,,,,,,9cmc_F_G_J,False
7r6x,H,L,0,R,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,06/23/21,"SARS-CoV-2 spike receptor-binding domain (RBD) in complex with S2E12 Fab, S309 Fab, and S304 Fab",HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Snell, G., Czudnochowski, N., Croll, T.I., Nix, J.C., Corti, D., Cameroni, E., Pinto, D., Beltramello, M.",2.95,X-RAY DIFFRACTION,0.262,0.232,False,True,IGHV3,IGKV1,Kappa,,,,,,7r6x_H_L_R,False
7k9z,B,A,0,E,protein,,spike glycoprotein,IMMUNE SYSTEM,09/29/20,Crystal structure of SARS-CoV-2 receptor binding domain in complex with the Fab fragments of neutralizing antibodies 298 and 52,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Newton, J.C., Kucharska, I., Rujas, E., Cui, H., Julien, J.P.",2.95,X-RAY DIFFRACTION,0.287,0.261,False,True,IGHV1,IGKV4,Kappa,,,,,,7k9z_B_A_E,False
7r6x,C,D,0,R,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,06/23/21,"SARS-CoV-2 spike receptor-binding domain (RBD) in complex with S2E12 Fab, S309 Fab, and S304 Fab",HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Snell, G., Czudnochowski, N., Croll, T.I., Nix, J.C., Corti, D., Cameroni, E., Pinto, D., Beltramello, M.",2.95,X-RAY DIFFRACTION,0.262,0.232,False,True,IGHV1,IGKV3,Kappa,,,,,,7r6x_C_D_R,False
8ttw,C,D,0,B,protein,,bg505 sosip.664 transmembrane protein gp41,VIRAL PROTEIN/INHIBITOR/IMMUNE SYSTEM,11/08/23,"Cryo-EM structure of BG505 SOSIP.664 HIV-1 Env trimer in complex with temsavir, 8ANC195, and 10-1074",Homo sapiens; Human immunodeficiency virus 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Tolbert, W.D., Pozharski, E., Pazgier, M.",2.96,ELECTRON MICROSCOPY,,,False,True,unknown,IGKV1,Kappa,,,,,,8ttw_C_D_B,False
7fjc,H,L,0,E,protein,,spike protein s1,VIRAL PROTEIN,08/10/22,Crystal structure of SARS-CoV-2 Beta RBD complexed with P36-5D2 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhang, L.Q., Wang, X.Q., Shan, S.S., Lan, J.",2.96,X-RAY DIFFRACTION,0.269,0.212,False,True,IGHV1,IGKV1,Kappa,,,,,,7fjc_H_L_E,False
9gu0,F,C,0,L,protein,,acetylcholine receptor subunit alpha,MEMBRANE PROTEIN,05/14/25,Human adult muscle nAChR in resting state in detergent with alpha-bungarotoxin,Aequorea victoria; Bungarus multicinctus; Homo sapiens; Rattus norvegicus,rattus norvegicus,rattus norvegicus,homo sapiens,"Li, A., Pike, A.C.W., Chi, G., Webster, R., Maxwell, S., Liu, W., Beeson, D., Sauer, D.B., Dong, Y.Y.",2.96,ELECTRON MICROSCOPY,,,False,True,IGHV2,IGKV22,Kappa,,,,,,9gu0_F_C_L,False
8z6x,B,C,0,A,protein,,"spike glycoprotein,fibritin,expression tag",VIRAL PROTEIN/IMMUNE SYSTEM,01/29/25,Structure of EG.5.1 RBD in complex with antibody CYFN1006-2.,Homo sapiens; Severe acute respiratory syndrome coronavirus 2; synthetic construct; Tequatrovirus T4,homo sapiens,homo sapiens,"severe acute respiratory syndrome coronavirus2, tequatrovirus t4, synthetic construct ","Wang, Y.J., Sun, L.",2.96,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGLV2,Lambda,,,,,,8z6x_B_C_A,False
7lab,H,L,0,C,protein,,spike glycoprotein,"VIRAL PROTEIN, IMMUNE SYSTEM",01/06/21,Structure of SARS-CoV-2 S protein in complex with N-terminal domain antibody DH1052,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Manne, K., Acharya, P.",2.97,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,7lab_H_L_C,False
7mw2,F,G,0,B,protein,,spike glycoprotein,VIRAL PROTEIN/Immune System,05/15/21,Structure of the SARS-CoV-2 Spike trimer with all RBDs down in complex with the Fab fragment of human neutralizing antibody clone 6,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Hu, Y., Xiong, Y.",2.97,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,7mw2_F_G_B,False
6y9b,J,N,0,B,protein,,metalloreductase steap1,MEMBRANE PROTEIN,05/20/20,Cryo-EM structure of trimeric human STEAP1 bound to three Fab120.545 fragments,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Oosterheert, W., Gros, P.",2.97,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV8,Kappa,,,,,,6y9b_J_N_B,False
7l2e,G,J,0,B,protein,,spike glycoprotein,Viral Protein/IMMUNE SYSTEM,12/16/20,Cryo-EM structure of NTD-directed neutralizing antibody 4-18 in complex with prefusion SARS-CoV-2 spike glycoprotein,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Cerutti, G., Shapiro, L.",2.97,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV3,Lambda,,,,,,7l2e_G_J_B,False
5k9k,A,B,0,I,protein,,hemagglutinin,IMMUNE SYSTEM,05/31/16,Crystal structure of multidonor HV6-1-class broadly neutralizing Influenza A antibody 56.a.09 in complex with Hemagglutinin Hong Kong 1968.,HOMO SAPIENS; INFLUENZA A VIRUS (STRAIN A/HONG KONG/1/1968 H3N2),homo sapiens,homo sapiens,influenza a virus (strain a/hong kong/1/1968h3n2) ,"Joyce, M.G., Thomas, P.V., Wheatley, A.K., McDermott, A.B., Mascola, J.R., Kwong, P.D.",2.97,X-RAY DIFFRACTION,0.265,0.225,False,True,IGHV6,IGKV3,Kappa,,,,,,5k9k_A_B_I,False
4dw2,H,L,0,U,protein,,urokinase-type plasminogen activator,HYDROLASE/IMMUNE SYSTEM,02/24/12,The crystal structure of uPA in complex with the Fab fragment of mAb-112,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Jiang, L., Botkjaer, K.A., Andersen, L.M., Yuan, C., Andreasen, P.A., Huang, M.",2.97,X-RAY DIFFRACTION,0.300,0.240,False,False,IGHV5,IGKV4,Kappa,,,,,,4dw2_H_L_U,False
9kmc,E,F,0,A,protein,,interleukin-2 receptor subunit alpha,IMMUNE SYSTEM,11/19/25,Cryo-EM structure of the heterotrimeric interleukin-2 receptor in complex with interleukin-2 and anti-CD25 Fab S417,Homo sapiens; synthetic construct,synthetic construct,synthetic construct,homo sapiens,"Katsura, K., Matsumoto, T., Shirouzu, M.",2.97,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV4,Kappa,,,,,,9kmc_E_F_A,False
8pg0,H,L,0,A,protein,,solute carrier organic anion transporter family member 1b3,TRANSPORT PROTEIN,09/27/23,Human OATP1B3,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Ciuta, A.-D., Nosol, K., Kowal, J., Mukherjee, S., Ramirez, A.S., Stieger, B., Kossiakoff, A.A., Locher, K.P.",2.97,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8pg0_H_L_A,False
8veb,G,I,0,E,protein,,hemagglutinin,IMMUNE SYSTEM/VIRAL PROTEIN,03/19/25,Cryo-EM structure of antibody T5-1E08 in complex with stabilized H1N1 Influenza Hemagglutinin Trimer (A/Kiev/1/57),Homo sapiens; Influenza A virus,homo sapiens,homo sapiens,influenza a virus,"Cerutti, G., Shapiro, L.",2.97,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV1,Kappa,,,,,,8veb_G_I_E,False
9dh2,P,Q,0,S,protein,,nkg2-d type ii integral membrane protein,IMMUNE SYSTEM,12/04/24,Structure of Fab in complex with NKG2D extracellular domain,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Fallon, D., Huang, C.S.",2.98,X-RAY DIFFRACTION,0.243,0.197,False,True,IGHV1,IGKV1,Kappa,,,,,,9dh2_P_Q_S,False
9e6j,H,L,0,A,protein,,hemagglutinin,VIRAL PROTEIN,01/21/26,DH726-1 Fab bound to hemagglutinin from influenza A/Solomon Islands/3/2006,Alphainfluenzavirus influenzae; Macaca mulatta,macaca mulatta,macaca mulatta,alphainfluenzavirus influenzae,"Finney, J., Harrison, S.C.",2.98,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,9e6j_H_L_A,False
6xsw,G,I,0,J,protein,,neurogenic locus notch homolog protein 3,SIGNALING PROTEIN/Immune System,07/16/20,Structure of the Notch3 NRR in complex with an antibody Fab Fragment,RATTUS NORVEGICUS; HOMO SAPIENS,rattus norvegicus,rattus norvegicus,homo sapiens,"Bard, J.",2.98,X-RAY DIFFRACTION,0.256,0.233,False,True,IGHV3,IGKV1,Kappa,,,,,,6xsw_G_I_J,False
7yud,H,L,0,R,protein,,sphingosine-1-phosphate transporter spns2,MEMBRANE PROTEIN,09/06/23,FTY720p-bound human SPNS2,Homo sapiens; Lama glama; synthetic construct (code 12),synthetic construct (code 12),synthetic construct (code 12),homo sapiens,"He, Y., Duan, Y.",2.98,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7yud_H_L_R,False
5kjr,H,L,0,G,protein,,clade a/e 93th057 hiv-1 gp120 core,VIRAL PROTEIN/IMMUNE SYSTEM/INHIBITOR,06/20/16,Crystal structure of the ADCC-potent antibody N60-i3 Fab in complex with HIV-1 Clade A/E gp120 W69A/S115W mutant and M48U1.,HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Tolbert, W.D., Pazgier, M.",2.98,X-RAY DIFFRACTION,0.306,0.249,False,True,IGHV4,IGLV2,Lambda,,,,,,5kjr_H_L_G,False
8rew,G,F,0,A,protein,,transforming growth factor beta-1,IMMUNE SYSTEM,03/26/25,CryoEM structure of human GARP-lTGFbeta1 in complex with a Fab fragment derived from an activating antibody.,Homo sapiens; Lama glama,lama glama,lama glama,homo sapiens,"Felix, J., Lambert, F., Marien, L., van der Woning, B., Savvides, S.N., Lucas, S.",2.98,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV8,Lambda,,,,,,8rew_G_F_A,False
8ved,H,L,0,A,protein,,hemagglutinin,IMMUNE SYSTEM/VIRAL PROTEIN,03/19/25,Cryo-EM structure of antibody T5-1E11 in complex with stabilized H1N1 Influenza Hemagglutinin Trimer (A/Kiev/1/57),Homo sapiens; Influenza A virus,homo sapiens,homo sapiens,influenza a virus,"Cerutti, G., Shapiro, L.",2.98,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV2,Kappa,,,,,,8ved_H_L_A,False
9kve,D,F,0,C,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,08/20/25,"Cryo-EM structure of SARS-CoV-2 prototype spike protein in complex with triple-nAb 4H1, 4A5 and 4C1",Macaca mulatta; Severe acute respiratory syndrome coronavirus 2,macaca mulatta,macaca mulatta,severe acute respiratory syndrome coronavirus2 ,"Sun, H., Jiang, Y., Wang, S., Zheng, Z., Li, S., Zheng, Q.",2.98,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV2,Kappa,,,,,,9kve_D_F_C,False
9kve,E,G,0,C,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,08/20/25,"Cryo-EM structure of SARS-CoV-2 prototype spike protein in complex with triple-nAb 4H1, 4A5 and 4C1",Macaca mulatta; Severe acute respiratory syndrome coronavirus 2,macaca mulatta,macaca mulatta,severe acute respiratory syndrome coronavirus2 ,"Sun, H., Jiang, Y., Wang, S., Zheng, Z., Li, S., Zheng, Q.",2.98,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,9kve_E_G_C,False
9kve,A,B,0,C,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,08/20/25,"Cryo-EM structure of SARS-CoV-2 prototype spike protein in complex with triple-nAb 4H1, 4A5 and 4C1",Macaca mulatta; Severe acute respiratory syndrome coronavirus 2,macaca mulatta,macaca mulatta,severe acute respiratory syndrome coronavirus2 ,"Sun, H., Jiang, Y., Wang, S., Zheng, Z., Li, S., Zheng, Q.",2.98,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV1,Lambda,,,,,,9kve_A_B_C,False
6xsw,D,E,0,F,protein,,neurogenic locus notch homolog protein 3,SIGNALING PROTEIN/Immune System,07/16/20,Structure of the Notch3 NRR in complex with an antibody Fab Fragment,RATTUS NORVEGICUS; HOMO SAPIENS,rattus norvegicus,rattus norvegicus,homo sapiens,"Bard, J.",2.98,X-RAY DIFFRACTION,0.256,0.233,False,True,IGHV3,IGKV1,Kappa,,,,,,6xsw_D_E_F,False
6fax,H,L,0,R,protein,,tumor necrosis factor receptor superfamily member 5,IMMUNE SYSTEM,12/18/17,Complex of Human CD40 Ectodomain with Lob 7.4 Fab,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Orr, C.M., Tews, I., Pearson, A.R.",2.99,X-RAY DIFFRACTION,0.231,0.185,False,True,IGHV1,IGKV10,Kappa,,,,,,6fax_H_L_R,False
7xh8,B,C,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,04/07/22,The structure of ZCB11 Fab against SARS-CoV-2 Omicron Spike,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Hang, L., Dang, S.",2.99,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,7xh8_B_C_A,False
6s8i,Y,U,0,E,protein,,enveloped glycoprotein 1,VIRAL PROTEIN,07/10/19,Structure of ZEBOV GP in complex with 3T0265 antibody,HOMO SAPIENS; EBOLA VIRUS,homo sapiens,homo sapiens,ebola virus,"Diskin, R., Cohen-Dvashi, H.",2.99,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV1,Lambda,,,,,,6s8i_Y_U_E,False
9loe,B,C,0,A,protein,,envelopment polyprotein,VIRAL PROTEIN/IMMUNE SYSTEM,01/28/26,Cryo-EM structure of SFTSV Gn in complex with ZS004-1C5,Homo sapiens; Severe fever with thrombocytopenia syndrome virus,homo sapiens,homo sapiens,severe fever with thrombocytopenia syndromevirus ,"Bi, J.H., Zhang, Y.Y., Zhou, Q., Li, D.P.",2.99,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV2,Lambda,,,,,,9loe_B_C_A,False
7bq5,C,D,0,B,protein,,envelope protein,VIRAL PROTEIN/IMMUNE SYSTEM,03/24/20,ZIKV sE bound to mAb Z6,ZIKA VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,zika virus,"Dai, L., Qi, J., Gao, G.F.",2.99,X-RAY DIFFRACTION,0.275,0.261,False,True,IGHV4,IGKV1,Kappa,,,,,,7bq5_C_D_B,False
7yrn,D,E,0,A,protein,,envelope glycoprotein b,VIRAL PROTEIN/IMMUNE SYSTEM,01/08/09,Cyro-EM structure of HCMV glycoprotein B in complex with 1B03 Fab,Homo sapiens; Human betaherpesvirus 5,homo sapiens,homo sapiens,human betaherpesvirus 5,"Wang, H., Zhu, S., Liao, H.",2.99,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGKV1,Kappa,,,,,,7yrn_D_E_A,False
7ps2,H,L,0,G,protein,,surface glycoprotein,VIRAL PROTEIN,09/22/21,Crystal structure of the receptor binding domain of SARS-CoV-2 beta variant spike glycoprotein in complex with Beta-29 and Beta-53 Fabs,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, D., Ren, J., Stuart, D.I.",2.99,X-RAY DIFFRACTION,0.266,0.233,False,True,IGHV5,IGKV3,Kappa,,,,,,7ps2_H_L_G,False
6xqw,H,L,0,E,protein,,pfmsp1-19,IMMUNE SYSTEM,07/10/20,Crystal Structure of MaliM03 Fab in complex with Pfmsp1-19,HOMO SAPIENS; PLASMODIUM FALCIPARUM,homo sapiens,homo sapiens,plasmodium falciparum,"Singh, S., Pancera, M.",2.991,X-RAY DIFFRACTION,0.309,0.252,False,True,IGHV4,IGLV1,Lambda,,,,,,6xqw_H_L_E,False
8t9z,H,L,0,A,protein,,fusion glycoprotein f0,VIRAL PROTEIN/Immune System,11/22/23,Structural of M8C10 Fab in complex human metapneumovirus fusion protein,Homo sapiens; Human metapneumovirus,homo sapiens,homo sapiens,human metapneumovirus,"Su, H.P., Eddins, M.J., Shipman, J.M., Kostas, J., Reid, J.C.",2.995,X-RAY DIFFRACTION,0.280,0.244,False,True,IGHV3,IGKV1,Kappa,,,,,,8t9z_H_L_A,False
6mqs,C,D,0,F,peptide,,hiv fusion peptide residue 512-519,IMMUNE SYSTEM,10/10/18,Vaccine-elicited NHP FP-targeting HIV neutralizing antibody A12V163-a.01 in complex with HIV fusion peptide (residue 512-519),PLATYRRHINI; SYNTHETIC CONSTRUCT,platyrrhini,platyrrhini,human immunodeficiency virus 1,"Xu, K., Wang, Y., Kwong, P.D.",2.997,X-RAY DIFFRACTION,0.247,0.233,False,True,IGHV4,IGLV1,Lambda,,,,,,6mqs_C_D_F,False
4ywg,H,L,0,G,protein,,scaffold hiv-1 gp120 v1v2 region derived from strain zm109,Viral protein/Immune system,03/20/15,Crystal structure of 830A in complex with V1V2,HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Pan, R., Kong, X.",2.998,X-RAY DIFFRACTION,0.296,0.219,False,True,IGHV4,IGKV3,Kappa,,,,,,4ywg_H_L_G,False
4ywg,I,M,0,Q,protein,,scaffold hiv-1 gp120 v1v2 region derived from strain zm109,Viral protein/Immune system,03/20/15,Crystal structure of 830A in complex with V1V2,HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Pan, R., Kong, X.",2.998,X-RAY DIFFRACTION,0.296,0.219,False,True,IGHV4,IGKV3,Kappa,,,,,,4ywg_I_M_Q,False
5th9,I,M,0,B,protein,,"matrix metalloproteinase-9,matrix metalloproteinase-9",hydrolase/hydrolase inhibitor,09/29/16,"Structure determination of a potent, selective antibody inhibitor of human MMP9 (GS-5745 bound to MMP-9)",ORYCTOLAGUS CUNICULUS; HOMO SAPIENS,oryctolagus cuniculus,oryctolagus cuniculus,homo sapiens,"Appleby, T.C., Greenstein, A.E., Kwon, H.J.",2.999,X-RAY DIFFRACTION,0.257,0.218,False,True,IGHV2,IGKV6,Kappa,,,,,,5th9_I_M_B,False
6dc9,H,L,0,P,peptide,,microtubule-associated protein tau,IMMUNE SYSTEM,05/04/18,Fab/epitope complex of human chimeric monoclonal antibody h4E6 targeting a phosphorylated tau epitope.,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,homo sapiens,"Chukwu, J.E., Kong, X.-P.",2.999,X-RAY DIFFRACTION,0.260,0.202,False,True,IGHV14,IGKV15,Kappa,,,,,,6dc9_H_L_P,False
5th9,J,N,0,C,protein,,"matrix metalloproteinase-9,matrix metalloproteinase-9",hydrolase/hydrolase inhibitor,09/29/16,"Structure determination of a potent, selective antibody inhibitor of human MMP9 (GS-5745 bound to MMP-9)",ORYCTOLAGUS CUNICULUS; HOMO SAPIENS,oryctolagus cuniculus,oryctolagus cuniculus,homo sapiens,"Appleby, T.C., Greenstein, A.E., Kwon, H.J.",2.999,X-RAY DIFFRACTION,0.257,0.218,False,True,IGHV2,IGKV6,Kappa,,,,,,5th9_J_N_C,False
5tud,C,B,0,A,protein,,"5-hydroxytryptamine receptor 2b,soluble cytochrome b562chimera ",SIGNALING PROTEIN,11/05/16,Structural Insights into the Extracellular Recognition of the Human Serotonin 2B Receptor by an Antibody,HOMO SAPIENS; ESCHERICHIA COLI; MUS MUSCULUS,mus musculus,mus musculus,"homo sapiens, escherichia coli","Ishchenko, A., Wacker, D., Kapoor, M., Zhang, A., Han, G.W., Basu, S., Boutet, S., James, D., Wang, D., Weierstall, U., Liu, W., Katritch, V., Stevens, R.C., Cherezov, V.",3.0,X-RAY DIFFRACTION,0.247,0.227,False,True,IGHV1,IGKV4,Kappa,,,,,,5tud_C_B_A,False
6n5d,C,D,0,A,protein,,hemagglutinin,VIRAL PROTEIN/IMMUNE SYSTEM,11/21/18,Broadly protective antibodies directed to a subdominant influenza hemagglutinin epitope,INFLUENZA A VIRUS; MUS MUSCULUS,mus musculus,mus musculus,influenza a virus,"Bajic, G., Schmidt, A.G.",3.0,X-RAY DIFFRACTION,0.244,0.217,False,True,IGHV5,IGLV1,Lambda,,,,,,6n5d_C_D_A,False
6vug,D,C,0,B,protein,,reverse transcriptase p51,PROTEIN BINDING,02/17/21,Diabody bound to a Reverse Transcriptase Aptamer Complex,Homo sapiens; Human immunodeficiency virus 1; Human immunodeficiency virus type 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Chesterman, C., Arnold, E.",3.0,X-RAY DIFFRACTION,0.255,0.202,False,True,IGHV3,IGKV1,Kappa,,,,,,6vug_D_C_B,False
6s3d,E,F,0,O,protein,,s0_2.126,ANTIVIRAL PROTEIN,06/25/19,Structure of D25 Fab in complex with scaffold S0_2.126,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,synthetic construct,"Cramer, J.T., Krey, T.",3.0,X-RAY DIFFRACTION,0.292,0.269,False,True,IGHV1,IGKV1,Kappa,,,,,,6s3d_E_F_O,False
7wwl,H,L,0,C,protein,,spike glycoprotein,VIRAL PROTEIN,02/13/22,S protein of Delta variant in complex with ZWD12,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Guo, Y.Y., Zhang, Y.Y., Zhou, Q.",3.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV3,Kappa,,,,,,7wwl_H_L_C,False
8hn7,D,C,0,F,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,05/17/23,Crystal structure of monoclonal antibody complexed with SARS-CoV-2 RBD,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Qi, J., Chen, Y.",3.0,X-RAY DIFFRACTION,0.263,0.232,False,True,IGHV3,IGKV3,Kappa,,,,,,8hn7_D_C_F,False
6j11,H,L,0,A,protein,,n-terminal domain of spike glycoprotein,VIRAL PROTEIN,12/27/18,MERS-CoV spike N-terminal domain and 7D10 scFv complex,MIDDLE EAST RESPIRATORY SYNDROME-RELATED CORONAVIRUS; MUS MUSCULUS,mus musculus,mus musculus,middle east respiratory syndrome-relatedcoronavirus ,"Zhou, H., Zhang, S., Zhang, S., Tang, W., Wang, X.",3.0,X-RAY DIFFRACTION,0.225,0.188,False,True,IGHV1,IGKV3,Kappa,,,,,,6j11_H_L_A,False
2aeq,H,L,0,A,protein,,neuraminidase,HYDROLASE/IMMUNE SYSTEM,07/23/05,An epidemiologically significant epitope of a 1998 influenza virus neuraminidase forms a highly hydrated interface in the NA-antibody complex.,INFLUENZA A VIRUS; MUS MUSCULUS,mus musculus,mus musculus,influenza a virus,"Venkatramani, L., Bochkarev, A., Air, G.M.",3.0,X-RAY DIFFRACTION,0.312,0.267,False,False,IGHV7,IGKV6,Kappa,1.2e-08,-10.8,Other,,16384583,2aeq_H_L_A,False
7czp,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN,09/09/20,S protein of SARS-CoV-2 in complex bound with P2B-1A1,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Yan, R.H., Zhang, Y.Y., Li, Y.N., Zhou, Q.",3.0,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGLV2,Lambda,,,,,,7czp_H_L_A,False
8hpk,H,L,0,A,protein,,oxalate,TRANSPORT PROTEIN/IMMUNE SYSTEM,02/15/23,Crystal structure of the bacterial oxalate transporter OxlT in an oxalate-bound occluded form,Mus musculus; Oxalobacter formigenes,mus musculus,mus musculus,oxalobacter formigenes,"Shimamura, T., Hirai, T., Yamashita, A.",3.0,X-RAY DIFFRACTION,0.278,0.237,False,True,IGHV1,IGKV4,Kappa,,,,,,8hpk_H_L_A,False
8rex,H,I,0,A,protein,,transforming growth factor beta-1 proprotein,IMMUNE SYSTEM,06/25/25,CryoEM structure of mouse GARP-lTGFbeta1 in complex with a Fab fragment derived from an activating antibody.,Mus musculus,mus musculus,mus musculus,mus musculus,"Felix, J., Lambert, F., Marien, L., van der Woning, B., Savvides, S.N., Lucas, S.",3.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV1,Lambda,,,,,,8rex_H_I_A,False
6xlq,K,L,0,J,protein,,butyrophilin subfamily 3 member a1,IMMUNE SYSTEM,06/29/20,Crystal Structure of the Human BTN3A1 Ectodomain in Complex with the CTX-2026 Fab,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,homo sapiens,"Payne, K.K., Mine, J.A., Biswas, S., Chaurio, R.A., Perales-Puchalt, A., Anadon, C.M., Costich, T.L., Harro, C.M., Walrath, J., Ming, Q., Tcyganov, E., Buras, A.L., Rigolizzo, K.E., Mandal, G., Lajoie, J., Ophir, M., Tchou, J., Marchion, D., Luca, V.C., Bobrowicz, P., McLaughlin, B., Eskiocak, U., Schmidt, M., Cubillos-Ruiz, J.R., Rodriguez, P.C., Gabrilovich, D.I., Conejo-Garcia, J.R.",3.0,X-RAY DIFFRACTION,0.296,0.246,False,True,IGHV1,IGKV1,Kappa,,,,,,6xlq_K_L_J,False
4ypg,H,L,0,D,protein,,interferon alpha-2,IMMUNE SYSTEM,03/12/15,Structural Insights Into the Neutralization Properties of a Human Anti-Interferon Monoclonal Antibody,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Oganesyan, V., Dall'Acqua, W.F.",3.0,X-RAY DIFFRACTION,0.272,0.206,False,True,IGHV1,IGKV3,Kappa,4.3999999999999997e-11,-14.128858472801308,SPR,,TBD,4ypg_H_L_D,False
4z5r,U,T,0,I,protein,,interferon alpha-2,Cytokine/Immune System,04/02/15,Rontalizumab Fab bound to Interferon-a2,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Eigenbrot, C., Maurer, B., Bosanac, I.",3.0,X-RAY DIFFRACTION,0.251,0.223,False,True,IGHV3,IGKV1,Kappa,1.8e-11,-14.658430977236662,SPR,,TBD,4z5r_U_T_I,False
4hj0,P,Q,0,A,protein,,gastric inhibitory polypeptide receptor,IMMUNE SYSTEM,10/12/12,Crystal structure of the human GIPr ECD in complex with Gipg013 Fab at 3-A resolution,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Madhurantakam, C., Ravn, P., Gruetter, M.G., Jackson, R.H.",3.0,X-RAY DIFFRACTION,0.311,0.255,False,True,IGHV1,IGLV1,Lambda,2.3e-08,-10.420467653019871,SPR,,TBD,4hj0_P_Q_A,False
7ly3,F,E,0,B,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,03/05/21,Crystal structure of SARS-CoV-2 S NTD bound to S2M28 Fab,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"McCallum, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)",3.0,X-RAY DIFFRACTION,0.234,0.209,False,True,IGHV3,IGLV3,Lambda,,,,,,7ly3_F_E_B,False
1fbi,Q,P,0,Y,protein,,guinea fowl lysozyme,COMPLEX (ANTIBODY/ANTIGEN),01/19/95,CRYSTAL STRUCTURE OF A CROSS-REACTION COMPLEX BETWEEN FAB F9.13.7 AND GUINEA-FOWL LYSOZYME,MUS MUSCULUS; NUMIDA MELEAGRIS,mus musculus,mus musculus,numida meleagris,"Lescar, J., Alzari, P.M.",3.0,X-RAY DIFFRACTION,unknown,0.190,False,True,IGHV1,IGKV10,Kappa,,,,,,1fbi_Q_P_Y,False
6pzw,F,E,0,C,protein,,neuraminidase,VIRAL PROTEIN/IMMUNE SYSTEM,08/01/19,CryoEM derived model of NA-22 Fab in complex with N9 Shanghai2,INFLUENZA A VIRUS (A/ENVIRONMENT/SHANGHAI/S1439/2013(H7N9)); HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus(a/environment/shanghai/s1439/2013(h7n9)) ,"Ward, A.B., Turner, H.L., Zhu, X.",3.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV2,Lambda,,,,,,6pzw_F_E_C,False
6mfp,H,L,0,G,protein,,clade a/e 93th057 hiv-1 gp120 core,VIRAL PROTEIN/IMMUNE SYSTEM,09/11/18,Crystal Structure of the RV305 C1-C2 specific ADCC potent antibody DH677.3 Fab in complex with HIV-1 clade A/E gp120 and M48U1,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Tolbert, W.D., Young, B., Pazgier, M.",3.0,X-RAY DIFFRACTION,0.274,0.214,False,True,IGHV1,IGKV1,Kappa,,,,,,6mfp_H_L_G,False
9ml1,S,T,0,B,protein,,major capsid protein l1,IMMUNE SYSTEM,08/20/25,D24.1M01 Fab bound to HPV16 L1 pentamer,Homo sapiens; Human papillomavirus 16,homo sapiens,homo sapiens,human papillomavirus 16,"Hurlburt, N.K., Singh, S., Rodarte, J.V., Pancera, M.",3.0,ELECTRON MICROSCOPY,,,False,True,IGHV2,IGLV1,Lambda,,,,,,9ml1_S_T_B,False
5vig,A,B,0,G,protein,,zika virus envelope protein diii,IMMUNE SYSTEM,04/16/17,Crystal structure of anti-Zika antibody Z006 bound to Zika virus envelope protein DIII,ZIKA VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,zika virus,"Keeffe, J.R., West Jr., A.P., Gristick, H.B., Bjorkman, P.J.",3.0,X-RAY DIFFRACTION,0.257,0.212,False,True,IGHV3,IGKV1,Kappa,,,,,,5vig_A_B_G,False
5mhr,I,H,0,B,protein,,viral attachment protein sigma 1,IMMUNE SYSTEM,11/25/16,T3D reovirus sigma1 complexed with 9BG5 Fab fragments,REOVIRUS SP.; MUS MUSCULUS,mus musculus,mus musculus,reovirus sp.,"Stehle, T., Dietrich, M.H.",3.0,X-RAY DIFFRACTION,0.247,0.212,False,False,IGHV1,IGKV4,Kappa,,,,,,5mhr_I_H_B,False
7klh,I,M,0,B,protein,,spike glycoprotein,VIRAL PROTEIN/Immune System,10/30/20,SARS-CoV-2 RBD in complex with Fab 15033-7,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Li, Z., Rini, J.M.",3.0,X-RAY DIFFRACTION,0.284,0.256,False,True,IGHV3,IGKV1,Kappa,,,,,,7klh_I_M_B,False
8z4e,C,B,0,A,protein,,neuraminidase,VIRAL PROTEIN,01/22/25,Structure of human 18_14D scFv and 1G01 scFv in complex with influenza virus neuraminidase from A/Yunan/DQ001/2016 (H5N6),Homo sapiens; Influenza A virus,homo sapiens,homo sapiens,influenza a virus,"Wang, M., Peng, Q., Gao, Y., Shi, Y.",3.0,ELECTRON MICROSCOPY,,,True,True,IGHV1,IGLV2,Lambda,,,,,,8z4e_C_B_A,False
7wvl,H,L,0,F,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,12/07/22,Structure of P4A2 Fab in complex with Spike-RBD from SARS-CoV-2,Mus musculus; Severe acute respiratory syndrome coronavirus 2,mus musculus,mus musculus,severe acute respiratory syndrome coronavirus2 ,"Narayanan, N., Nair, D.T.",3.0,X-RAY DIFFRACTION,0.279,0.233,False,True,IGHV1,IGKV3,Kappa,,,,,,7wvl_H_L_F,False
5vcn,D,C,0,B,protein,,peptidase 1,IMMUNE SYSTEM,03/31/17,THE CRYSTAL STRUCTURE OF DER P 1 ALLERGEN COMPLEXED WITH FAB FRAGMENT OF MAB 5H8,MUS MUSCULUS; DERMATOPHAGOIDES PTERONYSSINUS,mus musculus,mus musculus,dermatophagoides pteronyssinus,"Osinski, T., Majorek, K.A., Pomes, A., Offermann, L.R., Osinski, S., Glesner, J., Vailes, L.D., Chapman, M.D., Minor, W., Chruszcz, M.",3.0,X-RAY DIFFRACTION,0.265,0.219,False,True,IGHV2,IGKV10,Kappa,,,,,,5vcn_D_C_B,False
6al5,H,L,0,A,protein,,b-lymphocyte antigen cd19,IMMUNE SYSTEM,08/07/17,COMPLEX BETWEEN CD19 (N138Q MUTANT) AND B43 FAB,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Teplyakov, A., Obmolova, G., Gilliland, G.L.",3.0,X-RAY DIFFRACTION,0.263,0.189,False,True,IGHV1,IGKV1,Kappa,,,,,,6al5_H_L_A,False
7k9j,I,M,0,B,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,09/29/20,SARS-CoV-2 Spike in complex with neutralizing Fab 2H04 (three down conformation),SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; MUS MUSCULUS,mus musculus,mus musculus,severe acute respiratory syndrome coronavirus2 ,"Errico, J.M., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID)",3.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV5,Kappa,,,,,,7k9j_I_M_B,False
7jv6,C,D,0,B,protein,,sars-cov-2 spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,08/20/20,SARS-CoV-2 spike in complex with the S2H13 neutralizing antibody (closed conformation),SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Park, Y.J., Tortorici, M.A., Walls, A.C., Czudnochowski, N., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Snell, G., Veesler, D.",3.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV7,Lambda,,,,,,7jv6_C_D_B,False
5c0n,C,D,0,B,protein,,"fatty acid-binding protein, adipocyte",LIPID TRANSPORT,06/12/15,Development of a monoclonal antibody targeting secreted aP2 to treat diabetes and fatty liver disease,ORYCTOLAGUS CUNICULUS; MUS MUSCULUS,oryctolagus cuniculus,oryctolagus cuniculus,mus musculus,"Doyle, C.",3.0,X-RAY DIFFRACTION,0.265,0.186,False,True,IGHV1,IGKV1,Kappa,4.129999999999999e-06,-7.34515831911734,SPR,,TBD,5c0n_C_D_B,False
8z4e,E,F,0,A,protein,,neuraminidase,VIRAL PROTEIN,01/22/25,Structure of human 18_14D scFv and 1G01 scFv in complex with influenza virus neuraminidase from A/Yunan/DQ001/2016 (H5N6),Homo sapiens; Influenza A virus,homo sapiens,homo sapiens,influenza a virus,"Wang, M., Peng, Q., Gao, Y., Shi, Y.",3.0,ELECTRON MICROSCOPY,,,True,True,IGHV3,IGKV1,Kappa,,,,,,8z4e_E_F_A,False
4dke,I,M,0,B,protein,,interleukin-34,CYTOKINE/IMMUNE SYSTEM,02/03/12,Crystal Structure of Human Interleukin-34 Bound to FAb1.1,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Ma, X., Chen, Y., Stawicki, S., Wu, Y., Bazan, J.F., Starovasnik, M.A.",3.0,X-RAY DIFFRACTION,0.265,0.231,False,True,IGHV3,IGKV1,Kappa,1.2e-10,-13.534418347189932,SPR,,TBD,4dke_I_M_B,False
8cim,F,G,0,B,protein,,"spike glycoprotein,fibritin",VIRUS,07/05/23,BA.2-07 FAB IN COMPLEX WITH SARS-COV-2 BA.2.12.1 SPIKE GLYCOPROTEIN,Enterobacteria phage T4; Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,"severe acute respiratory syndrome coronavirus2, enterobacteria phage t4 ","Duyvesteyn, H.M.E., Ren, J., Stuart, D.I., Fry, E.E.",3.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,8cim_F_G_B,False
1ahw,B,A,0,C,protein,,tissue factor,COMPLEX (IMMUNOGLOBULIN/TISSUE FACTOR),04/10/97,A COMPLEX OF EXTRACELLULAR DOMAIN OF TISSUE FACTOR WITH AN INHIBITORY FAB (5G9),HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Huang, M., Syed, R., Stura, E.A., Stone, M.J., Stefanko, R.S., Ruf, W., Edgington, T.S., Wilson, I.A.",3.0,X-RAY DIFFRACTION,0.285,0.217,False,False,IGHV14,IGKV14,Kappa,,,,,,1ahw_B_A_C,True
7mrz,X,Y,0,C,protein,,"activin receptor type-2b,activin receptor type-1b",SIGNALING PROTEIN/IMMUNE SYSTEM,05/10/21,Structure of GDF11 bound to fused ActRIIB-ECD and Alk4-ECD with Anti-ActRIIB Fab fragment,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Goebel, E.J., Kattamuri, C., Gipson, G.R., Thompson, T.B.",3.0,X-RAY DIFFRACTION,0.327,0.288,False,True,IGHV4,IGKV4,Kappa,,,,,,7mrz_X_Y_C,False
9b2c,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,11/13/24,Structure of the Porcine deltacoronavirus (PDCoV) receptor-binding domain bound to the PD33 antibody Fab fragment and the Kappa light chain nanobody,Lama glama; Mus sp.; Porcine deltacoronavirus,mus sp.,mus sp.,porcine deltacoronavirus,"Park, Y.J., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler, D.",3.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV2,Kappa,,,,,,9b2c_H_L_A,False
8iuz,B,C,0,A,protein,,hemagglutinin,MEMBRANE PROTEIN/IMMUNE SYSTEM,04/24/24,H7N9 HA-2D7 Fab,H7N9 subtype; Mus musculus,mus musculus,mus musculus,h7n9 subtype,"Zhao, B.B., Sun, Z.Z.",3.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV15,Kappa,,,,,,8iuz_B_C_A,False
8khc,F,G,0,B,protein,,spike glycoprotein,VIRAL PROTEIN,04/17/24,SARS-CoV-2 Omicron spike in complex with 5817 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Cao, L., Wang, X.",3.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV3,Lambda,,,,,,8khc_F_G_B,False
1pkq,B,A,0,E,protein,,myelin oligodendrocyte glycoprotein,IMMUNE SYSTEM,06/06/03,Myelin Oligodendrocyte Glycoprotein-(8-18C5) Fab-complex,MUS MUSCULUS; RATTUS NORVEGICUS,mus musculus,mus musculus,rattus norvegicus,"Breithaupt, C., Schubart, A., Zander, H., Skerra, A., Huber, R., Linington, C., Jacob, U.",3.0,X-RAY DIFFRACTION,0.319,0.250,False,True,IGHV1,IGKV8,Kappa,,,,,,1pkq_B_A_E,False
7dk2,G,H,0,I,protein,,spike protein s1,IMMUNE SYSTEM/VIRAL PROTEIN,11/22/20,Crystal structure of SARS-CoV-2 Spike RBD in complex with MW07 Fab,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Wang, J., Jiao, S., Wang, R., Zhang, J., Zhang, M., Wang, M., Chen, S.",3.0,X-RAY DIFFRACTION,0.304,0.258,False,True,IGHV3,IGKV1,Kappa,,,,,,7dk2_G_H_I,False
8jlw,H,L,0,A,protein,,"glycoprotein c,cchfv envelope protein gc fusion loops",VIRAL PROTEIN,01/24/24,CCHFV envelope protein Gc in complex with Gc8,Crimean-Congo hemorrhagic fever orthonairovirus; Mus musculus,mus musculus,mus musculus,crimean-congo hemorrhagic feverorthonairovirus ,"Chong, T., Cao, S.",3.0,ELECTRON MICROSCOPY,,,False,False,IGHV1,IGKV12,Kappa,,,,,,8jlw_H_L_A,False
8jlx,H,L,0,A,protein,,"glycoprotein c,cchfv gc fusion loops",VIRAL PROTEIN,01/24/24,CCHFV envelope protein Gc in complex with Gc13,Crimean-Congo hemorrhagic fever orthonairovirus; Mus musculus,mus musculus,mus musculus,crimean-congo hemorrhagic feverorthonairovirus ,"Chong, T., Cao, S.",3.0,ELECTRON MICROSCOPY,,,False,False,IGHV1,IGKV10,Kappa,,,,,,8jlx_H_L_A,False
6p3r,A,B,0,L,protein,,hemagglutinin,VIRAL PROTEIN,05/27/20,crystal structure of human Fab H5.31 in complex with influenza A H5N1 Vietnam hemagglutinin head domain,HOMO SAPIENS; INFLUENZA A VIRUS (A/CHICKEN/VIETNAM/32/2004(H5N1)),homo sapiens,homo sapiens,influenza a virus(a/chicken/vietnam/32/2004(h5n1)) ,"Dong, J., Crowe, J.E.",3.0,X-RAY DIFFRACTION,0.226,0.192,False,True,IGHV3,IGKV1,Kappa,,,,,,6p3r_A_B_L,False
5i9q,H,L,0,G,protein,,426c.tm4dv1-3 p120,IMMUNE SYSTEM,02/20/16,Crystal structure of 3BNC55 Fab in complex with 426c.TM4deltaV1-3 gp120,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Scharf, L., Chen, C., Bjorkman, P.J.",3.0,X-RAY DIFFRACTION,0.270,0.251,False,True,unknown,IGKV1,Kappa,,,,,,5i9q_H_L_G,False
4oii,H,L,0,A,protein,,non-structural protein ns1,VIRAL PROTEIN/IMMUNE SYSTEM,01/19/14,West Nile Virus NS1 in complex with neutralizing 22NS1 antibody Fab,WEST NILE VIRUS; MUS MUSCULUS,mus musculus,mus musculus,west nile virus,"Edeling, M.A., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID)",3.0,X-RAY DIFFRACTION,0.265,0.214,False,True,IGHV1,IGKV12,Kappa,,,,,,4oii_H_L_A,False
8vcr,D,F,0,C,protein,,spike protein s2,VIRAL PROTEIN,07/31/24,SARS-CoV-2 Spike S2 bound to Fab 54043-5,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Johnson, N.V., McLellan, J.S.",3.0,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV3,Kappa,,,,,,8vcr_D_F_C,False
7epx,I,M,0,B,protein,,spike glycoprotein,VIRAL PROTEIN,04/28/21,S protein of SARS-CoV-2 in complex with GW01,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Shen, Y.P., Zhang, Y.Y., Yan, R.H., Li, Y.N., Zhou, Q.",3.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV1,Lambda,,,,,,7epx_I_M_B,False
5jhl,H,L,0,A,protein,,envelope protein,VIRAL PROTEIN/IMMUNE SYSTEM,04/21/16,Crystal structure of zika virus envelope protein in complex with a flavivirus broadly-protective antibody,MUS; ZIKA VIRUS,mus,mus,zika virus,"Dai, L., Shi, Y., Qi, J., Gao, G.F.",3.0,X-RAY DIFFRACTION,0.269,0.228,False,True,IGHV1,IGKV6,Kappa,2.7e-09,-11.689711339052632,SPR,,TBD,5jhl_H_L_A,False
8dyx,H,L,0,I,protein,,circumsporozoite protein,IMMUNE SYSTEM,08/02/23,Cryo-EM structure of 311 Fab in complex with recombinant shortened Plasmodium falciparum circumsporozoite protein (rsCSP),Homo sapiens; Plasmodium falciparum,homo sapiens,homo sapiens,plasmodium falciparum,"Martin, G.M., Ward, A.B.",3.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV1,Lambda,,,,,,8dyx_H_L_I,False
3i50,H,L,0,E,protein,,envelope glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,07/03/09,Crystal structure of the West Nile Virus envelope glycoprotein in complex with the E53 antibody Fab,WEST NILE VIRUS; MUS MUSCULUS,mus musculus,mus musculus,west nile virus,"Nybakken, G.E., Warren, J.T., Chen, B.R., Nelson, C.A., Fremont, D.H.",3.0,X-RAY DIFFRACTION,0.344,0.247,False,True,IGHV7,IGKV4,Kappa,,,,,,3i50_H_L_E,False
8dpm,I,J,0,F,protein,,glycoprotein gp1,VIRAL PROTEIN/Immune System,07/19/23,Structure of EBOV GP lacking the mucin-like domain with 9.20.1A2 Fab and 6D6 scFv bound,"Ebola virus - Mayinga, Zaire, 1976; Homo sapiens; Mus musculus",homo sapiens,homo sapiens,"ebola virus - mayinga, zaire, 1976","Yu, X., Saphire, E.O.",3.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV1,Lambda,,,,,,8dpm_I_J_F,False
7trh,H,B,0,G,protein,,hemagglutinin,IMMUNE SYSTEM/VIRAL PROTEIN,08/02/23,Human antibody K03.28 in complex with the influenza hemagglutinin head domain of A/California/07/2009(H1N1)(X-181),Homo sapiens; Influenza A virus,homo sapiens,homo sapiens,influenza a virus,"McCarthy, K.R.",3.0,X-RAY DIFFRACTION,0.242,0.202,False,True,IGHV3,IGLV3,Lambda,,,,,,7trh_H_B_G,False
9bdh,H,L,0,C,protein,,gt10.2,VIRAL PROTEIN,02/19/25,Crystal structure of HIV-1 MPER scaffold in complex with antibody Fab Ab45.1,Mus musculus,mus musculus,mus musculus,mus musculus,"Lee, C.C.D., Wilson, I.A.",3.0,X-RAY DIFFRACTION,0.290,0.269,False,True,IGHV1,IGKV3,Kappa,,,,,,9bdh_H_L_C,False
8cdd,E,D,0,B,protein,,cysteine-rich protective antigen,CELL ADHESION,10/25/23,PfRH5-PfCyRPA-PfRIPR complex from Plasmodium falciparum bound to antibody Cy.003,Gallus gallus; Plasmodium falciparum 3D7,gallus gallus,gallus gallus,plasmodium falciparum 3d7,"Farrell, B., Higgins, M.K.",3.0,ELECTRON MICROSCOPY,,,False,True,unknown,unknown,unknown,,,,,,8cdd_E_D_B,False
3bgf,H,L,0,S,protein,,spike protein s1,Viral Protein/Immune System,11/26/07,X-ray crystal structure of the SARS coronavirus spike receptor binding domain in complex with F26G19 Fab,SARS CORONAVIRUS; MUS MUSCULUS,mus musculus,mus musculus,sars coronavirus,"Pak, J.E., Rini, J.M.",3.0,X-RAY DIFFRACTION,0.286,0.234,False,False,IGHV1,IGKV9,Kappa,2.6e-08,-10.34,SPR,25.0,19324051,3bgf_H_L_S,False
9l1s,C,B,0,A,protein,,receptor tyrosine-protein kinase erbb-2,IMMUNE SYSTEM,01/01/25,Structure of the HER2 (S310F) - pertuzumab (T30S/D31A) complex,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Xu, L., Guo, J.",3.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,9l1s_C_B_A,False
9bns,A,B,0,D,peptide,,mper peptide,IMMUNE SYSTEM,01/15/25,Rhesus macaque ITS114.01 Fab in complex with SIV MPER peptide,Macaca mulatta; SYNTHETIC CONSTRUCT,macaca mulatta,macaca mulatta,simian immunodeficiency virus,"Gorman, J., Lai, Y.-T., Kwong, P.D.",3.0,X-RAY DIFFRACTION,0.271,0.228,False,True,IGHV4,IGKV1,Kappa,,,,,,9bns_A_B_D,False
9bns,H,L,0,C,peptide,,mper peptide,IMMUNE SYSTEM,01/15/25,Rhesus macaque ITS114.01 Fab in complex with SIV MPER peptide,Macaca mulatta; SYNTHETIC CONSTRUCT,macaca mulatta,macaca mulatta,simian immunodeficiency virus,"Gorman, J., Lai, Y.-T., Kwong, P.D.",3.0,X-RAY DIFFRACTION,0.271,0.228,False,True,IGHV4,IGKV1,Kappa,,,,,,9bns_H_L_C,False
1fpt,H,L,0,P,peptide,,fab fragment of an neutralizing antibody for type 1poliovirus ,COMPLEX (ANTIBODY/PV-1 FRAGMENT),01/26/95,THREE-DIMENSIONAL STRUCTURE OF THE COMPLEX BETWEEN THE FAB FRAGMENT OF AN NEUTRALIZING ANTIBODY FOR TYPE 1 POLIOVIRUS AND ITS VIRAL EPITOPE,HUMAN POLIOVIRUS 1; MUS MUSCULUS,mus musculus,mus musculus,human poliovirus 1,"Wien, M.W., Hogle, J.M.",3.0,X-RAY DIFFRACTION,unknown,0.230,False,True,IGHV1,IGKV1,Kappa,,,,,,1fpt_H_L_P,False
7l7e,O,P,0,K,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,12/28/20,Crystal structure of SARS-CoV-2 spike RBD in complex with human monoclonal antibodies AZD8895 and AZD1061,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Dong, J., Crowe, J.E.",3.0,X-RAY DIFFRACTION,0.273,0.215,False,True,IGHV3,IGKV4,Kappa,,,,,,7l7e_O_P_K,False
8jxs,H,L,0,C,protein,,"maltose/maltodextrin-binding periplasmic protein,immunoglobulin g-binding protein a,immunoglobulin g-binding protein g ",MEMBRANE PROTEIN,09/04/24,Structure of nanobody-bound DRD1_PF-6142 complex,Escherichia coli K-12; Homo sapiens; Mus musculus; Staphylococcus aureus,mus musculus,mus musculus,"escherichia coli k-12, staphylococcus aureus","Zhuang, Y., Xu, Y., Fan, L., Wang, S., Xu, H.E.",3.0,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGKV8,Kappa,,,,,,8jxs_H_L_C,False
9lu3,H,L,0,A,protein,,glycoprotein g,VIRAL PROTEIN/IMMUNE SYSTEM,11/26/25,LN1F9 Fab bound to Nipah Virus attachment (G) glycoprotein head domain,Henipavirus nipahense; Mus musculus,mus musculus,mus musculus,henipavirus nipahense,"Deng, Z., Kuang, W.",3.0,X-RAY DIFFRACTION,0.269,0.219,False,True,IGHV5,IGKV12,Kappa,,,,,,9lu3_H_L_A,False
5mhr,M,L,0,D,protein,,viral attachment protein sigma 1,IMMUNE SYSTEM,11/25/16,T3D reovirus sigma1 complexed with 9BG5 Fab fragments,REOVIRUS SP.; MUS MUSCULUS,mus musculus,mus musculus,reovirus sp.,"Stehle, T., Dietrich, M.H.",3.0,X-RAY DIFFRACTION,0.247,0.212,False,False,IGHV1,IGKV4,Kappa,,,,,,5mhr_M_L_D,False
4f2m,A,B,0,E,protein,,spike protein,VIRAL PROTEIN/IMMUNE SYSTEM,05/08/12,Crystal structure of a TGEV coronavirus Spike fragment in complex with the TGEV neutralizing monoclonal antibody 1AF10,TGEV VIRULENT PURDUE; MUS MUSCULUS,mus musculus,mus musculus,tgev virulent purdue,"Reguera, J., Santiago, C., Mudgal, G., Ordono, D., Enjuanes, L., Casasnovas, J.M.",3.0,X-RAY DIFFRACTION,0.251,0.216,False,True,IGHV1,IGKV5,Kappa,,,,,,4f2m_A_B_E,False
9bop,E,F,0,U,protein,,virion spike glycoprotein gp1,VIRAL PROTEIN/IMMUNE SYSTEM,11/05/25,A broadly-neutralizing antibody against Ebolavirus glycoprotein that can potentiate the breadth and neutralization potency of other anti-glycoprotein antibodies,Ebolavirus; Oryctolagus cuniculus,oryctolagus cuniculus,oryctolagus cuniculus,ebolavirus,"Donnellan, F.R., Rayaprolu, V., Rijal, P., O'Dowd, V., Parvate, A., Callaway, H., Hariharan, C., Parekh, D., Hui, S., Shaffer, K., Hastie, K., Shimanski, L., Muller-Krauter, H., Stecker, T., Balaram, A., Halfmann, P., Saphire, E.O., Lightwood, D.J., Townsend, A.R., Draper, S.J.",3.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,9bop_E_F_U,False
5d8j,H,L,0,A,protein,,"fatty acid-binding protein, adipocyte",IMMUNE SYSTEM,08/17/15,Development of a therapeutic monoclonal antibody targeting secreted aP2 to treat type 2 diabetes.,MUS MUSCULUS; ORYCTOLAGUS CUNICULUS,oryctolagus cuniculus,oryctolagus cuniculus,mus musculus,"Doyle, C., Birrane, G.",3.0,X-RAY DIFFRACTION,0.269,0.205,False,True,IGHV1,IGKV4,Kappa,1.78e-09,-11.93656279667228,SPR,,TBD,5d8j_H_L_A,False
1e6j,H,L,0,P,protein,,capsid protein p24,HIV CAPSID PROTEIN (P24),08/18/00,Crystal structure of HIV-1 capsid protein (p24) in complex with Fab13B5,HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 (CLONE 12); MUS MUSCULUS,mus musculus,mus musculus,human immunodeficiency virus type 1(clone 12) ,"Berthet-Colominas, C., Monaco, S., Novelli, A., Sibai, G., Mallet, F., Cusack, S.",3.0,X-RAY DIFFRACTION,0.284,0.210,False,False,IGHV1,IGKV4,Kappa,2.9e-08,-10.28,SPR,,11080628,1e6j_H_L_P,False
4z5r,Z,Y,0,X,protein,,interferon alpha-2,Cytokine/Immune System,04/02/15,Rontalizumab Fab bound to Interferon-a2,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Eigenbrot, C., Maurer, B., Bosanac, I.",3.0,X-RAY DIFFRACTION,0.251,0.223,False,True,IGHV3,IGKV1,Kappa,1.8e-11,-14.658430977236662,SPR,,TBD,4z5r_Z_Y_X,False
5o4g,B,A,0,C,protein,,receptor tyrosine-protein kinase erbb-2,ONCOPROTEIN,05/29/17,HER2 in complex with Fab MF3958,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"De Nardis, C., Gros, P.",3.0,X-RAY DIFFRACTION,0.271,0.229,False,True,IGHV1,IGKV1,Kappa,,,,,,5o4g_B_A_C,False
2r29,H,L,0,A,protein,,envelope protein e,Viral protein/Immune system,08/24/07,Neutralization of dengue virus by a serotype cross-reactive antibody elucidated by cryoelectron microscopy and x-ray crystallography,DENGUE VIRUS 2 THAILAND/16681/84; MUS MUSCULUS,mus musculus,mus musculus,dengue virus 2 thailand/16681/84,"Lok, S.M., Kostyuchenko, V.K., Nybakken, G.E., Holdaway,H.A, Battisti, A.J., Sukupolvi-petty,S., Sedlak,D., Fremont, D.H., Chipman, P.R., Roehrig, J.T., Diamond, M.S., Kuhn, R.J., Rossmann, M.G.",3.0,X-RAY DIFFRACTION,0.321,0.259,False,False,IGHV14,IGKV3,Kappa,,,,,,2r29_H_L_A,False
9ogt,J,M,0,C,protein,,hiv-1 envelope glycoprotein bg505 sosip.664 gp120,VIRAL PROTEIN/Immune System,08/27/25,HIV-1 Env BG505 SOSIP.664-His in complex with PGT122 and 3BNC117 Fabs,Homo sapiens; Human immunodeficiency virus 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Andrade, T.G., Ozorowski, G., Ward, A.B.",3.0,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGLV3,Lambda,,,,,,9ogt_J_M_C,False
3hmx,H,L,0,A,protein,,interleukin-12 subunit beta,Cytokine/IMMUNE SYSTEM,05/29/09,Crystal structure of ustekinumab FAB/IL-12 complex,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Luo, J.",3.0,X-RAY DIFFRACTION,0.303,0.211,False,True,IGHV5,IGKV1D,Kappa,,,,,,3hmx_H_L_A,False
5vic,H,L,0,E,protein,,dengue 1 envelope diii domain,IMMUNE SYSTEM,04/14/17,Crystal structure of anti-Zika antibody Z004 bound to DENV-1 Envelope protein DIII,HOMO SAPIENS; DENGUE VIRUS TYPE 1 (STRAIN NAURU/WEST PAC/1974),homo sapiens,homo sapiens,dengue virus type 1 (strain nauru/westpac/1974) ,"Keeffe, J.R., West Jr., A.P., Gristick, H.B., Bjorkman, P.J.",3.0,X-RAY DIFFRACTION,0.286,0.235,False,True,IGHV3,IGKV1,Kappa,,,,,,5vic_H_L_E,False
4qti,H,L,0,U,protein,,urokinase plasminogen activator surface receptor,IMMUNE SYSTEM,07/08/14,Crystal structure of human uPAR in complex with anti-uPAR Fab 8B12,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Zhao, B., Yuan, C., Luo, Z., Huang, M.",3.0,X-RAY DIFFRACTION,0.296,0.250,False,False,IGHV1,IGKV9,Kappa,1.7200000000000002e-08,-10.592634423700437,SPR,,TBD,4qti_H_L_U,False
9kvf,B,A,0,G,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,08/20/25,"Cryo-EM structure of SARS-CoV-2 EG.1 spike protein in complex with triple-nAb 4A5, 4C1 and 2E10",Macaca mulatta; Severe acute respiratory syndrome coronavirus 2,macaca mulatta,macaca mulatta,severe acute respiratory syndrome coronavirus2 ,"Sun, H., Jiang, Y., Wang, S., Zheng, Z., Li, S., Zheng, Q.",3.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV6,Lambda,,,,,,9kvf_B_A_G,False
7n0u,H,L,0,C,protein,,recombinant bet v 1,ALLERGEN,05/26/21,Complex of recombinant Bet v 1 with Fab fragment of REGN5713,MUS MUSCULUS; BETULA PENDULA,mus musculus,mus musculus,betula pendula,"Franklin, M.C., Romero Hernandez, A.",3.0,X-RAY DIFFRACTION,0.280,0.240,False,True,IGHV4,IGKV3,Kappa,,,,,,7n0u_H_L_C,False
5u8r,H,L,0,A,protein,,insulin-like growth factor 1 receptor,TRANSFERASE/IMMUNE SYSTEM,12/14/16,Structure of the ectodomain of the human Type 1 insulin-like growth factor receptor,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Lawrence, M., Xu, Y.",3.00002,X-RAY DIFFRACTION,0.285,0.256,False,True,IGHV1,IGKV5,Kappa,,,,,,5u8r_H_L_A,False
6xq2,F,E,0,D,protein,,hemagglutinin,VIRAL PROTEIN/IMMUNE SYSTEM,07/09/20,Human antibody S8V2-37 in complex with the influenza hemagglutinin head domain of A/Texas/50/2012(H3N2),INFLUENZA A VIRUS (A/TEXAS/50/2012(H3N2)); HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus (a/texas/50/2012(h3n2)),"McCarthy, K.R., Harrison, S.C.",3.002,X-RAY DIFFRACTION,0.290,0.247,False,True,IGHV3,IGKV1,Kappa,,,,,,6xq2_F_E_D,False
6p9h,H,L,0,A,protein,,iron-regulated heme-iron binding protein,IMMUNE SYSTEM,06/17/20,Crystal structure of human anti staphylococcus aureus antibody STAU-281 Fab in complex with IsdB NEAT2 domain,STAPHYLOCOCCUS AUREUS; HOMO SAPIENS,homo sapiens,homo sapiens,staphylococcus aureus,"Dong, J., Crowe, J.E.",3.003,X-RAY DIFFRACTION,0.225,0.206,False,True,IGHV1,IGKV3,Kappa,,,,,,6p9h_H_L_A,False
5dum,H,L,0,A,protein,,hemagglutinin,IMMUNE SYSTEM,09/19/15,Crystal structure of influenza A virus H5 hemagglutinin globular head in complex with the Fab of antibody 65C6,HOMO SAPIENS; INFLUENZA A VIRUS (A/ANHUI/1/2005(H5N1)),homo sapiens,homo sapiens,influenza a virus (a/anhui/1/2005(h5n1)),"Sun, J., Zuo, T., Wang, G., Zhou, P., Zhang, L., Wang, X.",3.003,X-RAY DIFFRACTION,0.269,0.215,False,True,IGHV5,IGKV3,Kappa,,,,,,5dum_H_L_A,False
6k7o,B,C,0,P,protein,,leukocyte immunoglobulin-like receptor subfamily b member4 ,IMMUNE SYSTEM,06/08/19,Complex structure of LILRB4 and h128-3 antibody,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Song, H., Chai, Y., Xu, X., Gao, F.G.",3.004,X-RAY DIFFRACTION,0.270,0.228,False,True,IGHV3,IGKV1,Kappa,,,,,,6k7o_B_C_P,False
4hf5,H,L,0,A,protein,,hemagglutinin ha1,VIRAL PROTEIN/IMMUNE SYSTEM,10/04/12,Crystal structure of Fab 8F8 in complex a H2N2 influenza virus hemagglutinin,INFLUENZA A VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus,"Xu, R., Wilson, I.A.",3.004,X-RAY DIFFRACTION,0.282,0.229,False,True,IGHV3,IGLV1,Lambda,,,,,,4hf5_H_L_A,False
9bdg,F,I,0,A,protein,,hemagglutinin,VIRAL PROTEIN,11/13/24,Influenza A virus Hemagglutinin H3/Darwin/6/2021 in complex with Fab ADI-85647,Homo sapiens; Influenza A virus,homo sapiens,homo sapiens,influenza a virus,"Ferreira Ramos, A.S., Bajic, G.",3.01,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,9bdg_F_I_A,False
9bdf,E,J,0,G,protein,,hemagglutinin,VIRAL PROTEIN,11/13/24,Influenza A virus Hemagglutinin H3/Darwin/6/2021 in complex with Fab ADI-85666,Homo sapiens; Influenza A virus,homo sapiens,homo sapiens,influenza a virus,"Ferreira Ramos, A.S., Bajic, G.",3.01,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV1,Kappa,,,,,,9bdf_E_J_G,False
8j1v,H,K,0,A,protein,,spike protein s2',VIRAL PROTEIN/IMMUNE SYSTEM,11/29/23,Cryo-EM structure of SARS-CoV2 Omicron BA.5 spike in complex with 8-9D Fabs,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Xiang, Y., Li, R.",3.01,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8j1v_H_K_A,False
8wpy,C,D,0,R,protein,,spike protein s1,IMMUNE SYSTEM/VIRAL PROTEIN,10/16/24,"Cryo-EM structure of SARS-CoV-2 receptor-binding domain (RBD) complexed with CB6 mutant,S309, and S304 antibodies",Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Su, C., Qi, J.X., Gao, G.F.",3.02,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8wpy_C_D_R,False
4yc2,B,C,0,A,protein,,the stabilized inner domain of clade a/e hiv-1 gp120 frome. coli ,VIRAL PROTEIN/IMMUNE SYSTEM,02/19/15,Crystal structure of the stabilized inner domain of clade A/E HIV-1 gp120 from E. coli in complex with the antibody A32.,HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Tolbert, W.D., Gohain, N., Pazgier, M.",3.02,X-RAY DIFFRACTION,0.288,0.227,False,True,IGHV4,IGLV2,Lambda,,,,,,4yc2_B_C_A,False
9dm7,H,L,0,A,protein,,mannosyltransferase,MEMBRANE PROTEIN,06/25/25,mannosyltransferase PimE in complex with Fab_E6,Homo sapiens; Mycobacteroides abscessus,homo sapiens,homo sapiens,mycobacteroides abscessus,"Liu, Y.",3.02,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,9dm7_H_L_A,False
5u7m,H,L,0,G,protein,,envelope glycoprotein gp160,VIRAL PROTEIN/Immune system,12/12/16,Crystal Structure of HIV-1 BG505 SOSIP.664 Prefusion Env Trimer bound to small molecule HIV-1 entry inhibitor BMS-378806 in Complex with Human Antibodies PGT122 and 35O22 at 3.8 A.,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Pancera, M., Lai, Y.-T., Kwong, P.D.",3.025,X-RAY DIFFRACTION,0.289,0.245,False,True,IGHV4,IGLV3,Lambda,1.8000000000000002e-07,-9.201454619595646,Unknown,,TBD,5u7m_H_L_G,False
7ukm,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,10/04/23,Cryo-EM structure of Antibody 12-19 in complex with prefusion SARS-CoV-2 Spike glycoprotein,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Casner, R.G., Shapiro, L.",3.03,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV2,Kappa,,,,,,7ukm_H_L_A,False
9lue,C,D,0,G,protein,,glycoprotein g,VIRAL PROTEIN/IMMUNE SYSTEM,11/26/25,Cryo-EM structure of the Nipah G head domain in complex with three Fabs,Henipavirus nipahense; Mesocricetus auratus,mesocricetus auratus,mesocricetus auratus,henipavirus nipahense,"Wang, Y., Deng, Z., Zhao, H.",3.03,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV4,Kappa,,,,,,9lue_C_D_G,False
9lof,B,C,0,A,protein,,envelopment polyprotein,VIRAL PROTEIN,01/28/26,Cryo-EM structure of SFTSV Gn in complex with ZS01S-336,Homo sapiens; Severe fever with thrombocytopenia syndrome virus,homo sapiens,homo sapiens,severe fever with thrombocytopenia syndromevirus ,"Bi, J.H., Zhang, Y.Y., Zhou, Q., Li, D.P.",3.03,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,9lof_B_C_A,False
9lue,H,L,0,G,protein,,glycoprotein g,VIRAL PROTEIN/IMMUNE SYSTEM,11/26/25,Cryo-EM structure of the Nipah G head domain in complex with three Fabs,Henipavirus nipahense; Mesocricetus auratus,mesocricetus auratus,mesocricetus auratus,henipavirus nipahense,"Wang, Y., Deng, Z., Zhao, H.",3.03,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV5,Kappa,,,,,,9lue_H_L_G,False
8xxw,H,L,0,E,protein,,spike protein s1,ANTIVIRAL PROTEIN/IMMUNE SYSTEM,06/19/24,Fab M2-7 complexed with SARS-Cov2 RBD and human ACE2,Homo sapiens; Mus musculus; Severe acute respiratory syndrome coronavirus 2,mus musculus,mus musculus,severe acute respiratory syndrome coronavirus2 ,"Liu, C., Xie, Y.",3.03,ELECTRON MICROSCOPY,,,False,True,IGHV14,IGKV14,Kappa,,,,,,8xxw_H_L_E,False
9lue,A,B,0,G,protein,,glycoprotein g,VIRAL PROTEIN/IMMUNE SYSTEM,11/26/25,Cryo-EM structure of the Nipah G head domain in complex with three Fabs,Henipavirus nipahense; Mesocricetus auratus,mesocricetus auratus,mesocricetus auratus,henipavirus nipahense,"Wang, Y., Deng, Z., Zhao, H.",3.03,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV3,Kappa,,,,,,9lue_A_B_G,False
7x3c,F,E,0,B,protein,,vp2,VIRUS,09/28/22,Cryo-EM structure of Coxsackievirus B1 muture virion in complex with nAbs 8A10 and 5F5 (CVB1-M:8A10:5F5),Coxsackievirus B1; Mus musculus,mus musculus,mus musculus,coxsackievirus b1,"Zheng, Q., Zhu, R., Sun, H., Cheng, T., Li, S., Xia, N.",3.03,ELECTRON MICROSCOPY,,,False,False,IGHV1,IGKV4,Kappa,,,,,,7x3c_F_E_B,False
9uxd,H,L,0,B,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,07/16/25,"SARS-CoV2 Spike protein with Fab fragment antibody KXD355,state1",Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Wang, H.",3.03,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV3,Kappa,,,,,,9uxd_H_L_B,False
7mjs,H,L,0,X,protein,,major facilitator superfamily domain containing 2a,LIPID TRANSPORT/IMMUNE SYSTEM,04/20/21,Single-Particle Cryo-EM Structure of Major Facilitator Superfamily Domain containing 2A in complex with LPC-18:3,SYNTHETIC CONSTRUCT; GALLUS GALLUS,synthetic construct,synthetic construct,gallus gallus,"Cater, R.J., Chua, G.L., Erramilli, S.K., Keener, J.E., Choy, B.C., Tokarz, P., Chin, C.F., Quek, D.Q.Y., Kloss, B., Pepe, J.G., Parisi, G., Wong, B.H., Clarke, O.B., Marty, M.T., Kossiakoff, A.A., Khelashvili, G., Silver, D.L., Mancia, F.",3.03,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7mjs_H_L_X,False
7s1b,H,L,0,A,protein,,envelope glycoprotein h,IMMUNE SYSTEM,11/09/22,Crystal structure of Epstein-Barr virus glycoproteins gH/gL/gp42-peptide in complex with human neutralizing antibodies 769C2 and 770F7,Homo sapiens; Human gammaherpesvirus 4,homo sapiens,homo sapiens,human gammaherpesvirus 4,"Chen, W.-H., Cohen, J.I., Kanekiyo, M., Joyce, M.G.",3.03,X-RAY DIFFRACTION,0.288,0.241,False,True,IGHV4,IGKV3,Kappa,,,,,,7s1b_H_L_A,False
9cps,H,L,0,A,protein,,spike protein s1,IMMUNE SYSTEM/Viral Protein,06/25/25,Crystal structure of SARS-CoV-2 receptor binding domain in complex with antibodies M22-91 and CC12.3,Homo sapiens; Mus musculus; Severe acute respiratory syndrome coronavirus 2,mus musculus,mus musculus,severe acute respiratory syndrome coronavirus2 ,"Feng, Z., Wilson, I.A.",3.03,X-RAY DIFFRACTION,0.253,0.215,False,True,IGHV5,IGKV4,Kappa,,,,,,9cps_H_L_A,False
7xst,N,O,0,C,protein,,spike glycoprotein,VIRAL PROTEIN,11/23/22,Cryo-EM structure of SARS-CoV-2 Omicron spike glycoprotein in complex with three F61 Fab and three D2 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Wang, X., Li, X.",3.04,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV1,Lambda,,,,,,7xst_N_O_C,False
7sbd,H,L,0,C,protein,,profilin-2,ALLERGEN/IMMUNE SYSTEM,08/10/22,Murine Fab/IgE in complex with profilin from Hevea brasieliensis (Hev b 8),Hevea brasiliensis; Mus musculus,mus musculus,mus musculus,hevea brasiliensis,"Rodriguez-Romero, A., Garcia-Ramirez, B.",3.04,X-RAY DIFFRACTION,0.254,0.228,False,False,IGHV10,IGKV12,Kappa,,,,,,7sbd_H_L_C,False
8kfa,E,G,0,C,protein,,envelope glycoprotein b,VIRAL PROTEIN/IMMUNE SYSTEM,01/08/09,Cryo-EM structure of HSV-1 gB with D48 Fab complex,Homo sapiens; Human herpesvirus 1 (strain KOS),homo sapiens,homo sapiens,human herpesvirus 1 (strain kos),"Yang, J., Sun, C., Fang, X., Zeng, M., Liu, Z.",3.04,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8kfa_E_G_C,False
8jg5,E,F,0,B,protein,,vp1,VIRUS,04/17/24,Cryo-EM structure of the GI.4 Chiba VLP complexed with the CV-1A1 Fv-clasp,Homo sapiens; Norovirus,homo sapiens,homo sapiens,norovirus,"Hosaka, T., Katsura, K., Kimura-Someya, T., Someya, Y., Shirouzu, M.",3.04,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV2,Lambda,,,,,,8jg5_E_F_B,False
7xst,D,E,0,A,protein,,spike glycoprotein,VIRAL PROTEIN,11/23/22,Cryo-EM structure of SARS-CoV-2 Omicron spike glycoprotein in complex with three F61 Fab and three D2 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Wang, X., Li, X.",3.04,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV1,Lambda,,,,,,7xst_D_E_A,False
8vef,H,L,0,A,protein,,hemagglutinin,IMMUNE SYSTEM/VIRAL PROTEIN,03/19/25,Cryo-EM structure of antibody T5-1E08 UCA (unmutated common ancestor) in complex with stabilized H1N1 Influenza Hemagglutinin Trimer (A/Kiev/1/57),Homo sapiens; Influenza A virus,homo sapiens,homo sapiens,influenza a virus,"Cerutti, G., Shapiro, L.",3.04,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV1,Kappa,,,,,,8vef_H_L_A,False
9bj3,E,F,0,B,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,03/05/25,"Structure of the SARS-CoV-2 S 6P trimer complex with the human neutralizing antibody Fab fragment, C1596",Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Rubio, A.A., Abernathy, M.E., Barnes, C.O.",3.04,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,9bj3_E_F_B,False
3raj,H,L,0,A,protein,,adp-ribosyl cyclase 1,HYDROLASE/IMMUNE SYSTEM,03/28/11,Crystal structure of human CD38 in complex with the Fab fragment of antibody HB7,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Zhang, H., Lee, H.C., Hao, Q.",3.044,X-RAY DIFFRACTION,0.275,0.205,False,True,IGHV2,IGKV13,Kappa,,,,,,3raj_H_L_A,False
6jhs,E,D,0,C,protein,,vp3,VIRUS,02/19/19,The cryo-EM structure of HAV bound to a neutralizing antibody-F7,HUMAN HEPATITIS A VIRUS HU/AUSTRALIA/HM175/1976; MUS MUSCULUS,mus musculus,mus musculus,human hepatitis a virushu/australia/hm175/1976 ,"Cao, L., Liu, P., Yang, P., Gao, Q., Li, H., Sun, Y., Zhu, L., Lin, J., Su, D., Rao, Z., Wang, X.",3.05,ELECTRON MICROSCOPY,,,False,False,IGHV5,IGKV4,Kappa,,,,,,6jhs_E_D_C,False
8xk5,A,B,0,E,protein,,envelopment polyprotein,VIRAL PROTEIN,07/10/24,SNB1G11 Fab bound to SFTSV glycoprotein Gn,Mus musculus; Severe fever with thrombocytopenia syndrome virus,mus musculus,mus musculus,severe fever with thrombocytopenia syndromevirus ,"Deng, Z.",3.05,X-RAY DIFFRACTION,0.281,0.215,False,True,IGHV7,IGKV10,Kappa,,,,,,8xk5_A_B_E,False
7ley,H,I,0,C,protein,,arginase-1,HYDROLASE/IMMUNE SYSTEM,01/15/21,Trimeric human Arginase 1 in complex with mAb5,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Gomez-Llorente, Y., Scapin, G., Palte, R.L.",3.05,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7ley_H_I_C,False
9uza,H,L,0,A,protein,,rna-directed rna polymerase l,HYDROLASE,12/31/25,Crystal structure of Crimean-Congo hemorrhagic fever virus cap-snatching endonuclease,Mus musculus; Orthonairovirus haemorrhagiae,mus musculus,mus musculus,orthonairovirus haemorrhagiae,"Deng, Z., Kuang, W., Tian, Z.",3.05,X-RAY DIFFRACTION,0.295,0.226,False,True,IGHV14,IGKV1,Kappa,,,,,,9uza_H_L_A,False
6t3j,A,B,0,E,protein,,tumor necrosis factor receptor superfamily member 10b,APOPTOSIS,10/11/19,Dual Epitope Targeting by Anti-DR5 Antibodies,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Tauchert, M.J., Augustin, M., Krapp, S., Overdijk, M.B., Breij, E.C.W., Hibbert, R.G.",3.05,X-RAY DIFFRACTION,0.282,0.251,False,True,IGHV14,IGKV3,Kappa,,,,,,6t3j_A_B_E,False
6u02,H,L,0,A,protein,,neuraminidase,VIRAL PROTEIN/IMMUNE SYSTEM,08/13/19,CryoEM-derived model of NA-63 Fab in complex with N9 Shanghai2,INFLUENZA A VIRUS (A/ENVIRONMENT/SHANGHAI/S1439/2013(H7N9)); HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus(a/environment/shanghai/s1439/2013(h7n9)) ,"Ward, A.B., Turner, H.L., Zhu, X.",3.05,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,6u02_H_L_A,False
6t3j,H,I,0,J,protein,,tumor necrosis factor receptor superfamily member 10b,APOPTOSIS,10/11/19,Dual Epitope Targeting by Anti-DR5 Antibodies,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Tauchert, M.J., Augustin, M., Krapp, S., Overdijk, M.B., Breij, E.C.W., Hibbert, R.G.",3.05,X-RAY DIFFRACTION,0.282,0.251,False,True,IGHV1,IGKV1,Kappa,,,,,,6t3j_H_I_J,False
6wtv,K,L,0,J,protein,,reticulocyte binding protein 2b,CELL INVASION,05/04/20,Plasmodium vivax reticulocyte binding protein 2b (PvRBP2b) bound to human monoclonal antibody 258259,PLASMODIUM VIVAX (STRAIN SALVADOR I); HOMO SAPIENS,homo sapiens,homo sapiens,plasmodium vivax (strain salvador i),"Chan, L.J., Dietrich, M.H., Tham, W.H.",3.05,X-RAY DIFFRACTION,0.277,0.235,False,True,IGHV3,IGLV3,Lambda,,,,,,6wtv_K_L_J,False
8xk5,G,H,0,L,protein,,envelopment polyprotein,VIRAL PROTEIN,07/10/24,SNB1G11 Fab bound to SFTSV glycoprotein Gn,Mus musculus; Severe fever with thrombocytopenia syndrome virus,mus musculus,mus musculus,severe fever with thrombocytopenia syndromevirus ,"Deng, Z.",3.05,X-RAY DIFFRACTION,0.281,0.215,False,True,IGHV7,IGKV10,Kappa,,,,,,8xk5_G_H_L,False
8vk1,F,E,0,D,protein,,der p 2 variant 3,ALLERGEN/IMMUNE SYSTEM,06/19/24,X-ray crystal structure of human IgE 4C8 Fab complex with Der p 2.0103,Dermatophagoides pteronyssinus; Homo sapiens,homo sapiens,homo sapiens,dermatophagoides pteronyssinus,"Khatri, K., Ball, A., Smith, S.A., Champan, M.D., Pomes, A., Chruszcz, M.",3.05,X-RAY DIFFRACTION,0.248,0.197,False,True,IGHV3,IGLV3,Lambda,,,,,,8vk1_F_E_D,False
6xy2,H,L,0,A,protein,,cytotoxic t-lymphocyte protein 4,IMMUNE SYSTEM,01/29/20,Crystal structure of CTLA-4 complexed with the Fab of HL32 antibody,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Gao, H., Zhou, A.",3.05,X-RAY DIFFRACTION,0.293,0.249,False,True,IGHV4,IGKV1,Kappa,,,,,,6xy2_H_L_A,False
8rek,H,L,0,A,protein,,apical membrane antigen 1 (fragment),IMMUNE SYSTEM,10/16/24,Plasmodium vivax Apical Membrane Antigen 1/Fab complex,Mus musculus; Plasmodium vivax Sal-1,mus musculus,mus musculus,plasmodium vivax sal-1,"Bentley, G.A., Saul, F.A., Vulliez-LeNormand, B.",3.05,X-RAY DIFFRACTION,0.292,0.221,False,False,IGHV5,IGKV4,Kappa,,,,,,8rek_H_L_A,False
7jwg,A,B,0,E,protein,,outer surface protein a,IMMUNE SYSTEM,08/25/20,OspA-Fab 221-7 complex structure,HOMO SAPIENS; BORRELIA BURGDORFERI (STRAIN ATCC 35210 / B31 / CIP 102532 / DSM 4680),homo sapiens,homo sapiens,borrelia burgdorferi (strain atcc 35210 / b31 /cip 102532 / dsm 4680) ,"Rudolph, M.J.",3.05,X-RAY DIFFRACTION,0.306,0.269,False,True,IGHV5,IGKV1,Kappa,,,,,,7jwg_A_B_E,False
5dup,H,L,0,A,protein,,hemagglutinin,IMMUNE SYSTEM,09/20/15,Influenza A virus H5 hemagglutinin globular head in complex with antibody AVFluIgG03,HOMO SAPIENS; INFLUENZA A VIRUS (A/ANHUI/1/2005(H5N1)),homo sapiens,homo sapiens,influenza a virus (a/anhui/1/2005(h5n1)),"Zuo, T., Sun, J., Wang, G., Zhou, P., Wang, X., Zhang, L.",3.052,X-RAY DIFFRACTION,0.257,0.199,False,True,IGHV3,IGLV1,Lambda,,,,,,5dup_H_L_A,False
6txz,J,N,0,C,protein,,hepatitis a virus cellular receptor 2,IMMUNE SYSTEM,04/08/20,FAB PART OF M6903 IN COMPLEX WITH HUMAN TIM3,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Musil, D., Sood, V.",3.06,X-RAY DIFFRACTION,0.253,0.197,False,True,IGHV3,IGLV2,Lambda,,,,,,6txz_J_N_C,False
9cfa,F,E,0,G,protein,,germline-targeting hiv-1 gp120 engineered outer domaineodgt8 ,IMMUNE SYSTEM,06/25/25,Germline-targeting HIV-1 gp120 engineered outer domain eODgt8 in complex with Fab eOD-CL04.1,Homo sapiens; Human immunodeficiency virus 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Sarkar, A., Stanfield, R.L., Wilson, I.A.",3.06,X-RAY DIFFRACTION,0.259,0.224,False,True,IGHV3,IGLV7,Lambda,,,,,,9cfa_F_E_G,False
8znz,F,E,0,A,protein,,5'-nucleotidase,IMMUNE SYSTEM,02/05/25,CD73 bound with HB0045,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Xu, J., Wan, L., He, Y.",3.06,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8znz_F_E_A,False
8znz,I,J,0,A,protein,,5'-nucleotidase,IMMUNE SYSTEM,02/05/25,CD73 bound with HB0045,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Xu, J., Wan, L., He, Y.",3.06,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV6,Kappa,,,,,,8znz_I_J_A,False
6xr0,H,L,0,M,protein,,melanotransferrin,METAL TRANSPORT,07/10/20,Crystal Structure of Human Melanotransferrin in complex with SC57.32 Fab,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Hayashi, K., Longenecker, K.L., Vivona, S.",3.064,X-RAY DIFFRACTION,0.225,0.202,False,False,IGHV1,IGKV10,Kappa,,,,,,6xr0_H_L_M,False
8gpt,F,G,0,B,protein,,envelope protein,ANTIVIRAL PROTEIN,11/02/22,YFV_E_YD6scFv_postfusion,Homo sapiens; Yellow fever virus,homo sapiens,homo sapiens,yellow fever virus,"Li, Y., Wu, L., Qi, J., Yan, J., Gao, G.F.",3.07,X-RAY DIFFRACTION,0.247,0.211,False,True,IGHV3,IGLV2,Lambda,,,,,,8gpt_F_G_B,False
8tmy,C,D,0,N,peptide,,stem helix peptide of spike protein s2',VIRAL PROTEIN/IMMUNE SYSTEM,07/31/24,Crystal structure of SARS-CoV-2 spike stem helix peptide in complex with neutralizing antibody CHM-16,Macaca mulatta; SYNTHETIC CONSTRUCT,macaca mulatta,macaca mulatta,severe acute respiratory syndrome coronavirus2 ,"Feng, Z., Wilson, I.A.",3.07,X-RAY DIFFRACTION,0.286,0.243,False,True,IGHV3,IGKV1,Kappa,,,,,,8tmy_C_D_N,False
8tvd,B,A,0,C,protein,,outer surface protein a,IMMUNE SYSTEM/Membrane Protein,08/28/24,Fab 221-11 in complex with OspA,Borreliella burgdorferi B31; Homo sapiens,homo sapiens,homo sapiens,borreliella burgdorferi b31,"Rudolph, M.J., Mantis, N.",3.077,X-RAY DIFFRACTION,0.286,0.234,False,True,IGHV5,IGKV1,Kappa,,,,,,8tvd_B_A_C,False
8tg9,H,L,0,A,protein,,atrial natriuretic peptide receptor 1,IMMUNE SYSTEM,07/17/24,"Complex of NPR1 ectodomain with ANP plus an allosteric activating antibody, REGN5381",Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Franklin, M.C., Romero Hernandez, A.",3.08,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,8tg9_H_L_A,False
7zfb,A,B,0,E,protein,,spike protein s1,VIRAL PROTEIN,04/01/22,"SARS-CoV-2 Omicron RBD in complex with nanobody C1, Omi-18 and Omi-31 Fabs",LAMA GLAMA; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, D., Huo, J., Ren, J., Stuart, D.I.",3.08,X-RAY DIFFRACTION,0.308,0.261,False,True,IGHV1,IGLV1,Lambda,,,,,,7zfb_A_B_E,False
7zfb,H,L,0,E,protein,,spike protein s1,VIRAL PROTEIN,04/01/22,"SARS-CoV-2 Omicron RBD in complex with nanobody C1, Omi-18 and Omi-31 Fabs",LAMA GLAMA; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, D., Huo, J., Ren, J., Stuart, D.I.",3.08,X-RAY DIFFRACTION,0.308,0.261,False,True,IGHV3,IGLV3,Lambda,,,,,,7zfb_H_L_E,False
8sis,H,L,0,A,protein,,spike protein s1,IMMUNE SYSTEM,03/13/24,Crystal structure of SARS-CoV-2 spike receptor-binding domain in complex with broadly neutralizing antibody CC84.2 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Liu, H., Wilson, I.A.",3.08,X-RAY DIFFRACTION,0.303,0.256,False,True,IGHV1,IGKV3,Kappa,,,,,,8sis_H_L_A,False
9jy1,R,Q,0,E,protein,,t-cell surface glycoprotein cd3 epsilon chain,IMMUNE SYSTEM,10/22/25,delta epsilon/delta epsilon Fab-TCR tetramer,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Wang, L., Li, J., Li, Z.",3.08,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV10,Kappa,,,,,,9jy1_R_Q_E,False
3wlw,H,L,0,B,protein,,receptor tyrosine-protein kinase erbb-2,HYDROLASE/IMMUNE SYSTEM,11/15/13,Molecular Architecture of the ErbB2 Extracellular Domain Homodimer,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Hu, S., Lou, Z.Y., Guo, Y.J.",3.088,X-RAY DIFFRACTION,0.269,0.232,False,True,IGHV1,IGLV2,Lambda,,,,,,3wlw_H_L_B,False
7ukl,M,N,0,B,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,10/04/23,Cryo-EM structure of Antibody 12-16 in complex with prefusion SARS-CoV-2 Spike glycoprotein,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Casner, R.G., Shapiro, L.",3.09,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV3,Lambda,,,,,,7ukl_M_N_B,False
9jt1,C,D,0,A,protein,,large envelope protein,IMMUNE SYSTEM/VIRAL PROTEIN,07/02/25,Structure of HBsAg in complex with FabHBC and FabGC1102,HBV genotype D3; Homo sapiens,homo sapiens,homo sapiens,hbv genotype d3,"Chen, L., He, X., Tao, W.",3.09,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,9jt1_C_D_A,False
9jt1,H,L,0,B,protein,,large envelope protein,IMMUNE SYSTEM/VIRAL PROTEIN,07/02/25,Structure of HBsAg in complex with FabHBC and FabGC1102,HBV genotype D3; Homo sapiens,homo sapiens,homo sapiens,hbv genotype d3,"Chen, L., He, X., Tao, W.",3.09,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV3,Lambda,,,,,,9jt1_H_L_B,False
8v5l,B,C,0,A,protein,,envelope glycoprotein e,VIRAL PROTEIN,10/09/24,Structure of the Varicella Zoster Virus (VZV) gI binding domain of glycoprotein E (gE) in complex with human Fab 1A2 and 1E12,Homo sapiens; Human alphaherpesvirus 3,homo sapiens,homo sapiens,human alphaherpesvirus 3,"Seraj, N., Holzapfel, G., Harshbarger, W.",3.09,X-RAY DIFFRACTION,0.269,0.233,False,True,IGHV4,IGLV1,Lambda,,,,,,8v5l_B_C_A,False
9bif,H,L,0,B,protein,,outer surface protein c,IMMUNE SYSTEM,11/20/24,Fab B11-OspCA complex,Borreliella burgdorferi B31; Homo sapiens,homo sapiens,homo sapiens,borreliella burgdorferi b31,"Rudolph, M.J., Mantis, N.",3.09,X-RAY DIFFRACTION,0.295,0.240,False,True,IGHV4,IGKV3,Kappa,,,,,,9bif_H_L_B,False
3ab0,E,F,0,D,protein,,bcla protein,IMMUNE SYSTEM,11/28/09,Crystal structure of complex of the Bacillus anthracis major spore surface protein BclA with ScFv antibody fragment,BACILLUS ANTHRACIS; MUS MUSCULUS,mus musculus,mus musculus,bacillus anthracis,"Streltsov, V.A.",3.09,X-RAY DIFFRACTION,0.265,0.197,False,True,IGHV5,IGKV4,Kappa,,,,,,3ab0_E_F_D,False
8v5l,H,L,0,A,protein,,envelope glycoprotein e,VIRAL PROTEIN,10/09/24,Structure of the Varicella Zoster Virus (VZV) gI binding domain of glycoprotein E (gE) in complex with human Fab 1A2 and 1E12,Homo sapiens; Human alphaherpesvirus 3,homo sapiens,homo sapiens,human alphaherpesvirus 3,"Seraj, N., Holzapfel, G., Harshbarger, W.",3.09,X-RAY DIFFRACTION,0.269,0.233,False,True,IGHV1,IGKV1,Kappa,,,,,,8v5l_H_L_A,False
7phv,E,F,0,D,protein,,cysteine-rich protective antigen,IMMUNE SYSTEM,08/18/21,PfCyRPA bound to monoclonal antibody Cy.007 Fab fragment,PLASMODIUM FALCIPARUM 3D7; GALLUS GALLUS,gallus gallus,gallus gallus,plasmodium falciparum 3d7,"Ragotte, R.J., Higgins, M.K.",3.091,X-RAY DIFFRACTION,0.332,0.287,False,True,unknown,unknown,unknown,,,,,,7phv_E_F_D,False
6shg,H,L,0,B,protein,,roab13 fab heavy chain (constant domain),IMMUNE SYSTEM,08/06/19,Diffraction data for RoAb13 crystal co-crystallised with PIYDIN and its RoAb13 structure,MUS MUSCULUS,mus musculus,mus musculus,mus musculus,"Saridakis, E., Helliwell, J.R., Govada, L., Chain, B., Morgan, M., Kassen, S.C., Chayen, N.E.",3.093,X-RAY DIFFRACTION,0.325,0.270,False,True,IGHV5,IGKV8,Kappa,,,,,,6shg_H_L_B,False
3tt1,H,L,0,B,protein,,leucine transporter leut,TRANSPORT PROTEIN,09/13/11,Crystal Structure of LeuT in the outward-open conformation in complex with Fab,AQUIFEX AEOLICUS; MUS MUSCULUS,mus musculus,mus musculus,aquifex aeolicus,"Krishnamurthy, H., Gouaux, E.",3.099,X-RAY DIFFRACTION,0.240,0.219,False,True,IGHV1,IGKV3,Kappa,,,,,,3tt1_H_L_B,False
9me5,H,L,0,A,protein,,type 1 fimbrin d-mannose specific adhesin,CELL ADHESION/IMMUNE SYSTEM,11/26/25,Antibody fragments from mAb824 and mAb926 bound to the adhesin protein FimH,Escherichia coli; Mus musculus,mus musculus,mus musculus,escherichia coli,"Hvorecny, K.L., Magala, P., Klevit, R.E., Kollman, J.M.",3.1,ELECTRON MICROSCOPY,,,False,False,IGHV1,IGKV1,Kappa,,,,,,9me5_H_L_A,False
7n0a,B,A,0,C,protein,,leukemia inhibitory factor,CYTOKINE/IMMUNE SYSTEM,05/25/21,Structure of Human Leukaemia Inhibitory Factor with Fab MSC1,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Raman, S., Bosch, A., Fransson, J., Julien, J.P.",3.1,X-RAY DIFFRACTION,0.284,0.232,False,True,IGHV3,IGKV2,Kappa,,,,,,7n0a_B_A_C,False
2fjh,H,L,0,V,protein,,vascular endothelial growth factor a,HORMONE/GROWTH FACTOR/IMMUNE SYSTEM,01/02/06,"Structure of the B20-4 Fab, a phage derived Fab fragment, in complex with VEGF",HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Wiesmann, C.",3.1,X-RAY DIFFRACTION,0.239,0.198,False,True,IGHV3,IGKV1,Kappa,3.8e-09,-11.94,SPR,37.0,16373345,2fjh_H_L_V,False
9cqd,B,F,0,T,peptide,,mature secreted glycoprotein g,VIRAL PROTEIN/IMMUNE SYSTEM,02/19/25,Antibody 2B11 bound to the central conserved domain of RSV G,Homo sapiens; Respiratory syncytial virus A2,homo sapiens,homo sapiens,respiratory syncytial virus a2,"Juarez, M.G., DuBois, R.M.",3.1,X-RAY DIFFRACTION,0.324,0.292,False,True,IGHV1,IGLV2,Lambda,,,,,,9cqd_B_F_T,False
6i04,C,D,0,B,protein,,hepatocyte growth factor receptor,IMMUNE SYSTEM,10/25/18,Crystal structure of Sema domain of the Met receptor in complex with FAB,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Casaletto, J.B., Geddie, M.L., Abu-Yousif, A.O., Masson, K., Fulgham, A., Boudot, A., Maiwald, T., Kearns, J.D., Kohli, N., Su, S., Razlog, M., Raue, A., Kalra, A., Hakansson, M., Logan, D.T., Welin, M., Chattopadhyay, S., Harms, B.D., Nielsen, U.B., Schoeberl, B., Lugovskoy, A.A., MacBeath, G.",3.1,X-RAY DIFFRACTION,0.261,0.202,False,True,IGHV4,IGKV1,Kappa,,,,,,6i04_C_D_B,False
8ume,E,G,0,B,protein,,hemagglutinin,VIRAL PROTEIN,12/25/24,Influenza A virus Hemagglutinin H5/Vietnam/1204/2004 in complex with D04 Fab,Homo sapiens; Influenza A virus,homo sapiens,homo sapiens,influenza a virus,"Ferreira Ramos, A.S., Bajic, G.",3.1,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV4,Kappa,,,,,,8ume_E_G_B,False
9oog,I,M,0,d,protein,,unknown,VIRAL PROTEIN/IMMUNE SYSTEM,11/12/25,Cryo-EM structure of vaccine-elicited antibody T3_NB_G05 in complex with HIV Env trimer Q23-APEX-GT1.N187S,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Roark, R.S., Shapiro, L.S., Kwong, P.D.",3.1,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,9oog_I_M_d,False
7c2l,J,N,0,C,protein,,spike glycoprotein,MEMBRANE PROTEIN/IMMUNE SYSTEM,05/08/20,S protein of SARS-CoV-2 in complex bound with 4A8,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Yan, R.H., Zhang, Y.Y., Guo, Y.Y., Li, Y.N., Xia, L., Zhou, Q.",3.1,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV2,Kappa,,,,,,7c2l_J_N_C,False
2i9l,B,A,0,I,protein,,virion membrane protein m25,IMMUNE SYSTEM/VIRAL PROTEIN,09/05/06,Structure of Fab 7D11 from a neutralizing antibody against the poxvirus L1 protein,VACCINIA VIRUS; MUS MUSCULUS,mus musculus,mus musculus,vaccinia virus,"Su, H.P., Golden, J.W., Gittis, A.G., Moss, B., Hooper, J.W., Garboczi, D.N.",3.1,X-RAY DIFFRACTION,0.259,0.240,False,False,IGHV1,IGKV8,Kappa,,,,,,2i9l_B_A_I,False
9bhb,H,K,0,A,protein,,"erythrocyte membrane protein 1, pfemp1",IMMUNE SYSTEM,10/02/24,Cryo-EM structure of human monoclonal antibody C74 targeting PFD1235w (CIDRa1.6) PfEMP1,Homo sapiens; Plasmodium falciparum 3D7,homo sapiens,homo sapiens,plasmodium falciparum 3d7,"Raghavan, S.S.R., Ward, A.B.",3.1,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV3,Kappa,,,,,,9bhb_H_K_A,False
7w9e,D,E,0,C,protein,,spike glycoprotein,VIRAL PROTEIN,12/09/21,SARS-CoV-2 Delta S-8D3,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; MUS MUSCULUS,mus musculus,mus musculus,severe acute respiratory syndrome coronavirus2 ,"Cong, Y., Liu, C.X.",3.1,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV6,Kappa,,,,,,7w9e_D_E_C,False
9e21,H,L,0,S,protein,,sars xbb.1.5 spike,IMMUNE SYSTEM,07/30/25,CryoEM structure of a broadly neutralizing anti-SARS-CoV-2 antibody 52,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Jaiswal, D., Bajic, G.",3.1,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,9e21_H_L_S,False
9me7,J,N,0,A,protein,,type 1 fimbrin d-mannose specific adhesin,CELL ADHESION/IMMUNE SYSTEM,11/26/25,Antibody fragments from mAb21 and mAb824 bound to the adhesin protein FimH containing alpha-methyl mannose,Escherichia coli; Mus musculus,mus musculus,mus musculus,escherichia coli,"Hvorecny, K.L., Magala, P., Klevit, R.E., Kollman, J.M.",3.1,ELECTRON MICROSCOPY,,,False,False,IGHV1,IGKV4,Kappa,,,,,,9me7_J_N_A,False
9me7,I,M,0,A,protein,,type 1 fimbrin d-mannose specific adhesin,CELL ADHESION/IMMUNE SYSTEM,11/26/25,Antibody fragments from mAb21 and mAb824 bound to the adhesin protein FimH containing alpha-methyl mannose,Escherichia coli; Mus musculus,mus musculus,mus musculus,escherichia coli,"Hvorecny, K.L., Magala, P., Klevit, R.E., Kollman, J.M.",3.1,ELECTRON MICROSCOPY,,,False,False,IGHV1,IGKV10,Kappa,,,,,,9me7_I_M_A,False
7m6d,H,L,0,C,protein,,spike protein s1,VIRAL PROTEIN/ANTIVIRAL PROTEIN,03/25/21,Structure of the SARS-CoV-2 RBD in complex with neutralizing antibodies BG4-25 and CR3022,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Barnes, C.O., Bjorkman, P.J.",3.1,X-RAY DIFFRACTION,0.259,0.219,False,True,IGHV3,IGKV3,Kappa,,,,,,7m6d_H_L_C,False
9dd6,J,N,0,G,protein,,glycoprotein b,VIRAL PROTEIN,09/10/25,Cryo-EM structure of neutralizing murine antibody WS.HSV-1.24 in complex with HSV-1 glycoprotein B trimer gB-Ecto.516P.531E,Human alphaherpesvirus 1; Mus musculus,mus musculus,mus musculus,human alphaherpesvirus 1,"Roark, R.S., Shapiro, L.S., Kwong, P.D.",3.1,ELECTRON MICROSCOPY,,,False,True,IGHV2,IGKV9,Kappa,,,,,,9dd6_J_N_G,False
8wyj,H,J,0,C,protein,,spike glycoprotein,VIRAL PROTEIN,11/13/24,The global map of Omicron Subvariants Spike with two antibodies,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Yan, R.H., Wang, A.J., Yang, H.N.",3.1,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,8wyj_H_J_C,False
9dq5,H,L,0,C,protein,,cytotoxic t-lymphocyte protein 4,ANTITUMOR PROTEIN/IMMUNE SYSTEM,02/05/25,Crystal structure of Anti-CTLA-4 Fab (9D9) in complex with mouse CTLA-4,Homo sapiens; Mus musculus,homo sapiens,homo sapiens,mus musculus,"Lee, P.S., Diong, S.J., Robison, B.",3.1,X-RAY DIFFRACTION,0.301,0.239,False,True,IGHV1,IGKV1,Kappa,,,,,,9dq5_H_L_C,False
7bpk,C,D,0,A,protein,,envelope protein,VIRAL PROTEIN/IMMUNE SYSTEM,03/23/20,Zika virus envelope protein mutant bound to mAb,ZIKA VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,zika virus,"Dai, L., Qi, J., Gao, G.F.",3.1,X-RAY DIFFRACTION,0.268,0.232,False,True,IGHV3,IGLV1,Lambda,,,,,,7bpk_C_D_A,False
6uta,H,L,0,E,protein,,env,VIRAL PROTEIN,10/29/19,Crystal structure of Z004 iGL Fab in complex with ZIKV EDIII,HOMO SAPIENS; ZIKA VIRUS ZIKV/H. SAPIENS/FRENCHPOLYNESIA/10087PF/2013,homo sapiens,homo sapiens,zika virus zikv/h.sapiens/frenchpolynesia/10087pf/2013 ,"Esswein, S.R., Gristick, H.B., Keeffe, J.R., Bjorkman, P.J.",3.1,X-RAY DIFFRACTION,0.291,0.274,False,True,IGHV3,IGKV1,Kappa,,,,,,6uta_H_L_E,False
7ra8,F,G,0,E,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,06/30/21,SARS-CoV-2 S glycoprotein in complex with S2X259 Fab,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Veesler, D., Tortorici, M.A., Seattle Structural Genomics Center for Infectious Disease (SSGCID)",3.1,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV1,Lambda,,,,,,7ra8_F_G_E,False
4u1g,E,F,0,D,protein,,reticulocyte binding protein 5,IMMUNE SYSTEM,07/15/14,Plasmodium falciparum reticulocyte-binding protein homologue 5 (PfRH5) bound to monoclonal antibody QA1,PLASMODIUM FALCIPARUM; ORYCTOLAGUS CUNICULUS,oryctolagus cuniculus,oryctolagus cuniculus,plasmodium falciparum,"Wright, K.E., Hjerrild, K.A., Bartlett, J., Douglas, A.D., Jin, J., Brown, R.E., Ashfield, R., Clemmensen, S.B., de Jongh, W.A., Draper, S.J., Higgins, M.K.",3.1,X-RAY DIFFRACTION,0.281,0.236,False,True,IGHV5,IGKV3,Kappa,,,,,,4u1g_E_F_D,False
5w0k,E,F,0,C,protein,,envelope glycoprotein h,VIRAL PROTEIN/Immune system,05/31/17,Crystal structure of EBV gHgL/CL40/gp42 N-domain,HUMAN HERPESVIRUS 4 (STRAIN B95-8); MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,human herpesvirus 4 (strain b95-8),"Sathiyamoorthy, K., Jardetzky, T.S.",3.1,X-RAY DIFFRACTION,0.299,0.242,False,True,IGHV1,IGKV6,Kappa,6.880000000000002e-08,-9.771277639060871,SPR,,TBD,5w0k_E_F_C,False
9au2,D,I,0,C,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,10/16/24,VIR-7229 Fab fragment bound the BA.2.86 spike trimer (global refinement),Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Tortorici, M.A., Park, Y.J., Veelser, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)",3.1,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV2,Lambda,,,,,,9au2_D_I_C,False
9jub,B,C,0,A,protein,,hyaluronidase ph-20,HYDROLASE/IMMUNE SYSTEM,10/30/24,Cryo-EM structure of human hyaluronidase PH-20,Homo sapiens; Oryctolagus cuniculus,oryctolagus cuniculus,oryctolagus cuniculus,homo sapiens,"Im, S.-B., Jeong, T.-K., Kim, N., Oh, B.-H.",3.1,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,9jub_B_C_A,False
5wdf,H,L,0,P,peptide,,hiv-1 gp41 peptide,IMMUNE SYSTEM,07/05/17,Crystal structure of 10E8v4-5R+100cF Fab in complex with HIV-1 gp41 peptide,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Kwon, Y.D., Kwong, P.D.",3.1,X-RAY DIFFRACTION,0.281,0.247,False,True,IGHV3,IGLV3,Lambda,,,,,,5wdf_H_L_P,False
9puo,D,E,0,F,protein,,leptin,IMMUNE SYSTEM,11/05/25,Neutralizing monoclonal antibody Fab fragment bound to leptin,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Tomchick, D.R., Wynn, R.M., Scherer, P.E.",3.1,X-RAY DIFFRACTION,0.277,0.236,False,True,IGHV1,IGLV1,Lambda,,,,,,9puo_D_E_F,False
6snd,B,A,0,C,peptide,,envelope glycoprotein gp160,IMMUNE SYSTEM,08/23/19,crystal structure of LN01 Fab in complex with an HIV-1 gp41 peptide,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Caillat, C., Pinto, D., Corti, D., Fenwick, C., Pantaleo, G., Weissenhorn, W.",3.1,X-RAY DIFFRACTION,0.267,0.238,False,True,IGHV4,IGKV1,Kappa,,,,,,6snd_B_A_C,False
1i9r,H,L,0,A,protein,,cd40 ligand,CYTOKINE/IMMUNE SYSTEM,03/20/01,STRUCTURE OF CD40L IN COMPLEX WITH THE FAB FRAGMENT OF HUMANIZED 5C8 ANTIBODY,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Karpusas, M., Lucci, J., Ferrant, J., Benjamin, C., Hsu, Y.-M.",3.1,X-RAY DIFFRACTION,0.285,0.233,False,False,IGHV1,IGKV3D,Kappa,,,,,,1i9r_H_L_A,False
7sn3,H,L,0,C,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,10/27/21,Structure of human SARS-CoV-2 spike glycoprotein trimer bound by neutralizing antibody C1C-A3 Fab (variable region),SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Pan, J., Abraham, J., Shankar, S.",3.1,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV3,Kappa,,,,,,7sn3_H_L_C,False
7lk4,D,C,0,S,protein,,bcl-2 homologous antagonist/killer,APOPTOSIS,02/01/21,Crystal structure of BAK L100A in complex with activating antibody fragments,HOMO SAPIENS; RATTUS NORVEGICUS,rattus norvegicus,rattus norvegicus,homo sapiens,"Robin, Y.A., Colman, P.M.",3.1,X-RAY DIFFRACTION,0.262,0.214,False,True,IGHV5,IGKV16,Kappa,,,,,,7lk4_D_C_S,False
4u6h,C,D,0,J,protein,,protein l1,IMMUNE SYSTEM,07/29/14,Vaccinia L1/M12B9-Fab complex,VACCINIA VIRUS; MUS MUSCULUS,mus musculus,mus musculus,vaccinia virus,"Matho, M.H., Schlossman, A., Zajonc, D.M.",3.1,X-RAY DIFFRACTION,0.265,0.209,False,False,IGHV1,IGKV1,Kappa,9.1e-11,-13.698318432538963,SPR,,TBD,4u6h_C_D_J,True
3w2d,H,L,0,A,protein,,enterotoxin type b,IMMUNE SYSTEM,11/28/12,Crystal Structure of Staphylococcal Eenterotoxin B in complex with a novel neutralization monoclonal antibody Fab fragment,STAPHYLOCOCCUS AUREUS; MUS MUSCULUS,mus musculus,mus musculus,staphylococcus aureus,"Liang, S.Y., Hu, S., Dai, J.X., Guo, Y.J., Lou, Z.Y.",3.1,X-RAY DIFFRACTION,0.261,0.196,False,True,IGHV3,IGKV4,Kappa,5.787000000000001e-10,-12.60226823733781,SPR,,TBD,3w2d_H_L_A,True
6phf,C,D,0,E,protein,,25 kda ookinete surface antigen,IMMUNE SYSTEM,06/25/19,Pfs25 in complex with the human transmission blocking antibody 2587,HOMO SAPIENS; PLASMODIUM FALCIPARUM,homo sapiens,homo sapiens,plasmodium falciparum,"McLeod, B.R., Julien, J.P.",3.1,X-RAY DIFFRACTION,0.267,0.237,False,True,IGHV1,IGLV3,Lambda,,,,,,6phf_C_D_E,False
8err,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,10/26/22,SARS-CoV-2 Omicron BA.1 spike ectodomain trimer in complex with the S2X324 neutralizing antibody Fab fragment,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Park, Y.J., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler, D.",3.1,ELECTRON MICROSCOPY,,,False,True,IGHV2,IGLV2,Lambda,,,,,,8err_H_L_A,False
5wdf,A,B,0,Q,peptide,,hiv-1 gp41 peptide,IMMUNE SYSTEM,07/05/17,Crystal structure of 10E8v4-5R+100cF Fab in complex with HIV-1 gp41 peptide,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Kwon, Y.D., Kwong, P.D.",3.1,X-RAY DIFFRACTION,0.281,0.247,False,True,IGHV3,IGLV3,Lambda,,,,,,5wdf_A_B_Q,False
5vl3,C,D,0,S,protein,,b-cell receptor cd22,IMMUNE SYSTEM,04/24/17,CD22 d1-d3 in complex with therapeutic Fab Epratuzumab,HOMO SAPIENS; MUS MUSCULUS,"mus musculus, homo sapiens","mus musculus, homo sapiens",homo sapiens,"Sicard, T., Ereno-Orbea, J., Julien, J.P.",3.1,X-RAY DIFFRACTION,0.295,0.280,False,True,IGHV1,IGKV8,Kappa,,,,,,5vl3_C_D_S,False
7t9m,H,L,0,R,protein,,thyrotropin receptor,MEMBRANE PROTEIN,08/10/22,Human Thyrotropin receptor bound by CS-17 Inverse Agonist Fab/Org 274179-0 Antagonist,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Faust, B., Cheng, Y., Manglik, A.",3.1,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV4,Kappa,,,,,,7t9m_H_L_R,False
8gtp,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,07/12/23,cryo-EM structure of Omicron BA.5 S protein in complex with XGv289,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Xia, X.Y., Zhang, Y.Y., Chi, X.M., Huang, B.D., Wu, L.S., Zhou, Q.",3.1,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV1,Lambda,,,,,,8gtp_H_L_A,False
6wvz,H,L,0,M,protein,,hepatocyte growth factor receptor,Transferase/Immune System,05/07/20,Crystal structure of anti-MET Fab arm of amivantamab in complex with human MET,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Cardoso, R.M.F.",3.1,X-RAY DIFFRACTION,0.235,0.190,False,True,IGHV1,IGKV1,Kappa,,,,,,6wvz_H_L_M,False
6bdz,H,L,0,A,protein,,disintegrin and metalloproteinase domain-containing protein10 ,MEMBRANE PROTEIN,10/24/17,ADAM10 Extracellular Domain Bound by the 11G2 Fab,MUS MUSCULUS; HOMO SAPIENS,mus musculus,mus musculus,homo sapiens,"Seegar, T.C.M.",3.1,X-RAY DIFFRACTION,0.317,0.261,False,True,IGHV2,IGKV4,Kappa,,,,,,6bdz_H_L_A,False
3ubx,H,L,0,A,protein,,antigen-presenting glycoprotein cd1d1,IMMUNE SYSTEM,10/25/11,Crystal structure of the mouse CD1d-C20:2-aGalCer-L363 mAb Fab complex,MUS MUSCULUS,mus musculus,mus musculus,mus musculus,"Yu, E.D., Zajonc, D.M.",3.1,X-RAY DIFFRACTION,0.230,0.202,False,False,IGHV9,IGKV13,Kappa,2.52e-08,-10.366344400034732,Unknown,,TBD,3ubx_H_L_A,False
3kj4,C,B,0,D,protein,,reticulon-4 receptor,IMMUNE SYSTEM,11/02/09,Structure of rat Nogo receptor bound to 1D9 antagonist antibody,RATTUS NORVEGICUS; MUS MUSCULUS,mus musculus,mus musculus,rattus norvegicus,"Silvian, L.F.",3.1,X-RAY DIFFRACTION,0.318,0.253,False,True,IGHV2,IGKV8,Kappa,,,,,,3kj4_C_B_D,False
7sfx,C,D,0,F,peptide,,cd99 antigen peptide,IMMUNE SYSTEM,10/04/21,10A1 Fab in complex with CD99 peptide,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,homo sapiens,"Romero, L.A., Hattori, T., Koide, S.",3.1,X-RAY DIFFRACTION,0.248,0.226,False,True,IGHV6,IGLV3,Lambda,,,,,,7sfx_C_D_F,False
7mzn,H,L,0,A,protein,,spike protein s1,VIRAL PROTEIN,05/24/21,SARS-CoV-2 receptor binding domain bound to Fab PDI 231,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Pymm, P., Tan, L.L., Dietrich, M.H., Chan, L.J., Tham, W.H.",3.1,X-RAY DIFFRACTION,0.259,0.223,False,True,IGHV3,IGKV1,Kappa,,,,,,7mzn_H_L_A,False
4uao,C,B,0,A,protein,,apical merozoite antigen 1,CELL INVASION,08/11/14,Crystal structure of Apical Membrane Antigen 1 from Plasmodium Knowlesi in complex with an invasion inhibitory antibody,PLASMODIUM KNOWLESI; RATTUS NORVEGICUS,rattus norvegicus,rattus norvegicus,plasmodium knowlesi,"Vulliez-Le Normand, B., Saul, F.A., Bentley, G.A.",3.1,X-RAY DIFFRACTION,0.266,0.188,False,False,IGHV5,IGKV14,Kappa,,,,,,4uao_C_B_A,False
6n8d,D,B,0,A,protein,,major capsid protein,IMMUNE SYSTEM,11/29/18,Crystal structure of GII.4 2002 norovirus P domain in complex with neutralizing human antibody A1431,NOROVIRUS HU/GII.4/FARMINGTON HILLS/2004/USA; HOMO SAPIENS,homo sapiens,homo sapiens,norovirus hu/gii.4/farmington hills/2004/usa,"Changela, A., Verardi, R., Kwong, P.D.",3.1,X-RAY DIFFRACTION,0.227,0.176,False,True,IGHV3,IGKV3,Kappa,,,,,,6n8d_D_B_A,False
8oz3,H,L,0,D,protein,,tumor necrosis factor receptor superfamily member 9,IMMUNE SYSTEM,03/13/24,Crystal structure of scFv ATOR 1017 bound to human 4-1BB,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Hakansson, M., Von Schantz, L., Rose, N.",3.1,X-RAY DIFFRACTION,0.271,0.205,True,True,IGHV3,IGKV1,Kappa,,,,,,8oz3_H_L_D,False
8g5b,I,M,0,A,protein,,hemagglutinin,VIRAL PROTEIN,02/21/24,Influenza A H3N2 X-31 Hemagglutinin in complex with FL-1061,Homo sapiens; Influenza A virus; Mus musculus,mus musculus,mus musculus,influenza a virus,"Windsor, I.W., Thornlow, D., Schmidt, A.G.",3.1,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV16,Kappa,,,,,,8g5b_I_M_A,False
8g5b,J,N,0,A,protein,,hemagglutinin,VIRAL PROTEIN,02/21/24,Influenza A H3N2 X-31 Hemagglutinin in complex with FL-1061,Homo sapiens; Influenza A virus; Mus musculus,homo sapiens,homo sapiens,influenza a virus,"Windsor, I.W., Thornlow, D., Schmidt, A.G.",3.1,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV1,Kappa,,,,,,8g5b_J_N_A,False
7pry,C,D,0,I,protein,,surface glycoprotein,VIRAL PROTEIN,09/22/21,Crystal structure of the receptor binding domain of SARS-CoV-2 beta variant spike glycoprotein in complex with COVOX-45 and beta-6 Fabs,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, D., Ren, J., Stuart, D.I.",3.1,X-RAY DIFFRACTION,0.291,0.245,False,True,IGHV4,IGKV3,Kappa,,,,,,7pry_C_D_I,False
8g5b,H,L,0,A,protein,,hemagglutinin,VIRAL PROTEIN,02/21/24,Influenza A H3N2 X-31 Hemagglutinin in complex with FL-1061,Homo sapiens; Influenza A virus; Mus musculus,mus musculus,mus musculus,influenza a virus,"Windsor, I.W., Thornlow, D., Schmidt, A.G.",3.1,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV2,Kappa,,,,,,8g5b_H_L_A,False
8r9x,H,L,0,A,protein,,pdcov spike glycoprotein s1a domain,VIRAL PROTEIN,06/05/24,Local refinement of the PDCoV spike glycoprotein ectodomain in complex with the 22C10 antibody Fab fragment,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Debski-Antoniak, O., Hurdiss, D.L.",3.1,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV3,Kappa,,,,,,8r9x_H_L_A,False
5t1d,H,L,0,B,protein,,envelope glycoprotein l,VIRAL PROTEIN,08/18/16,Crystal structure of EBV gHgL/gp42/E1D1 complex,EPSTEIN-BARR VIRUS (STRAIN B95-8); EPSTEIN-BARR VIRUS (STRAIN GD1); MUS MUSCULUS,mus musculus,mus musculus,epstein-barr virus (strain b95-8),"Sathiyamoorthy, K., Jardetzky, T.S.",3.1,X-RAY DIFFRACTION,0.265,0.212,False,False,IGHV1,IGKV1,Kappa,,,,,,5t1d_H_L_B,False
8u4r,H,L,0,R,protein,,c-x-c chemokine receptor type 4,SIGNALING PROTEIN/IMMUNE SYSTEM,03/13/24,Structure of REGN7663-Fab bound CXCR4,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Saotome, K., McGoldrick, L.L., Franklin, M.C.",3.1,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV2,Kappa,,,,,,8u4r_H_L_R,False
8t4d,O,Q,0,E,protein,,md65 n332-gt5 sosip gp120,VIRAL PROTEIN/Immune System,01/08/09,MD65 N332-GT5 SOSIP in complex with RM_N332_08 Fab and RM20A3 Fab,Human immunodeficiency virus 1; Macaca mulatta,macaca mulatta,macaca mulatta,human immunodeficiency virus 1,"Ozorowski, G., Torres, J.L., Ward, A.B.",3.1,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV2,Kappa,,,,,,8t4d_O_Q_E,False
4kvn,H,L,0,A,protein,,hemagglutinin,IMMUNE SYSTEM,05/22/13,Crystal structure of Fab 39.29 in complex with Influenza Hemagglutinin A/Perth/16/2009 (H3N2),HOMO SAPIENS; INFLUENZA A VIRUS,homo sapiens,homo sapiens,influenza a virus,"Fong, R., Swem, L.R., Lupardus, P.J.",3.1,X-RAY DIFFRACTION,0.248,0.202,False,True,IGHV3,IGKV3,Kappa,,,,,,4kvn_H_L_A,False
1ynt,D,C,0,G,protein,,major surface antigen p30,IMMUNE SYSTEM,01/25/05,Structure of the immunodominant epitope displayed by the surface antigen 1 (SAG1) of Toxoplasma gondii complexed to a monoclonal antibody,FINEGOLDIA MAGNA; TOXOPLASMA GONDII; MUS MUSCULUS,mus musculus,mus musculus,toxoplasma gondii,"Graille, M., Stura, E.A., Bossus, M., Muller, B.H., Letourneur, O., Battail-Poirot, N, Sibai, G., Rolland, D., Le Du, M.H., Ducancel, F.",3.1,X-RAY DIFFRACTION,0.283,0.241,False,False,IGHV1,IGKV10,Kappa,,,,,,1ynt_D_C_G,False
6w16,H,L,0,F,protein,,"fusion glycoprotein f0,envelope glycoprotein fusion",IMMUNE SYSTEM,06/03/20,Crystal structure of a human metapneumovirus monomeric fusion protein complexed with 458 Fab,HUMAN METAPNEUMOVIRUS; HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,"human metapneumovirus, human immunodeficiencyvirus 1 ","Huang, J., Mousa, J.J.",3.1,X-RAY DIFFRACTION,0.234,0.190,False,True,IGHV3,IGKV1,Kappa,,,,,,6w16_H_L_F,False
6phd,H,L,0,C,protein,,25 kda ookinete surface antigen,IMMUNE SYSTEM,06/25/19,Pfs25 in complex with the human transmission blocking antibody 2586,HOMO SAPIENS; PLASMODIUM FALCIPARUM,homo sapiens,homo sapiens,plasmodium falciparum,"McLeod, B.R., Julien, J.P.",3.1,X-RAY DIFFRACTION,0.231,0.213,False,True,IGHV3,IGLV3,Lambda,,,,,,6phd_H_L_C,False
8tp2,H,L,0,C,protein,,hemagglutinin,VIRAL PROTEIN/Immune System,10/11/23,H2 hemagglutinin (A/Singapore/1/1957) in complex with RBS-targeting 1-1-1F05,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Yang, Y.R., Han, J., Perrett, H.R., Ward, A.B.",3.1,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV3,Kappa,,,,,,8tp2_H_L_C,False
8vif,H,L,0,R,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,07/24/24,"SARS-CoV-2 spike omicron (BA.1) ectodomain trimer in complex with SC27 Fab, local refinement",Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Byrne, P.O., McLellan, J.S.",3.1,ELECTRON MICROSCOPY,,,False,True,IGHV2,IGLV1,Lambda,,,,,,8vif_H_L_R,False
8e6k,H,L,0,A,protein,,neuraminidase,VIRAL PROTEIN,08/09/23,2H08 Fab in complex with influenza virus neuraminidase from A/Brevig Mission/1/1918 (H1N1),Homo sapiens; Influenza A virus (A/Brevig Mission/1/1918(H1N1)),homo sapiens,homo sapiens,influenza a virus (a/brevigmission/1/1918(h1n1)) ,"Turner, H.L., Ozorowski, G., Ward, A.B.",3.1,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV1,Kappa,,,,,,8e6k_H_L_A,False
8tp9,H,L,0,A,protein,,hemagglutinin,VIRAL PROTEIN/Immune System,10/11/23,H2 hemagglutinin (A/Singapore/1/1957) in complex with medial-junction-targeting Fab 2-2-1G06,Homo sapiens; Influenza A virus (A/Singapore/1/1957(H2N2)),homo sapiens,homo sapiens,influenza a virus (a/singapore/1/1957(h2n2)),"Yang, Y.R., Han, J., Perrett, H.R., Ward, A.B.",3.1,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV1,Kappa,,,,,,8tp9_H_L_A,False
8tp6,H,L,0,A,protein,,hemagglutinin,VIRAL PROTEIN/Immune System,10/11/23,H2 hemagglutinin (A/Singapore/1/1957) in complex with RBS-targeting Fab 4-1-1E02,Homo sapiens; Influenza A virus (A/Singapore/1/1957(H2N2)),homo sapiens,homo sapiens,influenza a virus (a/singapore/1/1957(h2n2)),"Yang, Y.R., Han, J., Perrett, H.R., Ward, A.B.",3.1,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV1,Kappa,,,,,,8tp6_H_L_A,False
7dfp,C,B,0,A,protein,,"d(2) dopamine receptor,soluble cytochrome b562",MEMBRANE PROTEIN,11/09/20,Human dopamine D2 receptor in complex with spiperone,HOMO SAPIENS; ESCHERICHIA COLI; MUS MUSCULUS,mus musculus,mus musculus,"homo sapiens, escherichia coli","Im, D., Shimamura, T., Iwata, S.",3.1,X-RAY DIFFRACTION,0.217,0.185,False,False,IGHV1,IGKV10,Kappa,,,,,,7dfp_C_B_A,False
8tnj,E,F,0,A,protein,,"9mer peptide,beta-2-microglobulin,mhc class i antigenchimera ",IMMUNE SYSTEM,08/14/24,Cryo-EM structure of HLA-B*73:01 bound to a 9mer peptide and two Fabs,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Ross, P., Adams, E.J., Lodwick, J., Zhao, M., Slezak, T., Kossiakoff, A.",3.1,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8tnj_E_F_A,False
7nwl,D,E,0,B,protein,,integrin beta-1,CELL ADHESION,03/17/21,Cryo-EM structure of human integrin alpha5beta1 (open form) in complex with fibronectin and TS2/16 Fv-clasp,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Schumacher, S., Dedden, D., Vazquez Nunez, R., Matoba, K., Takagi, J., Biertumpfel, C., Mizuno, N.",3.1,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGKV4,Kappa,,,,,,7nwl_D_E_B,False
3wd5,H,L,0,A,protein,,tumor necrosis factor,IMMUNE SYSTEM,06/06/13,Crystal structure of TNFalpha in complex with Adalimumab Fab fragment,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Hu, S., Liang, S.Y., Guo, Y.J., Lou, Z.Y.",3.101,X-RAY DIFFRACTION,0.275,0.187,False,True,IGHV3,IGKV1,Kappa,1.1500000000000002e-10,-13.559634224160162,SPR,,TBD,3wd5_H_L_A,False
5esv,C,D,0,F,protein,,"2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase,envelope glycoprotein gp160 ",IMMUNE SYSTEM,11/17/15,"Crystal Structure of Broadly Neutralizing Antibody CH03, Isolated from Donor CH0219, in Complex with Scaffolded Trimeric HIV-1 Env V1V2 Domain from the Clade C Superinfecting Strain of Donor CAP256.",HOMO SAPIENS; HAEMOPHILUS INFLUENZAE,homo sapiens,homo sapiens,"haemophilus influenzae, human immunodeficiencyvirus 1, haemophilus influenzae (strain atcc 51907 / dsm 11121 / kw20 / rd) ","Gorman, J., Yang, M., Kwong, P.D.",3.105,X-RAY DIFFRACTION,0.259,0.209,False,True,IGHV3,IGKV3,Kappa,,,,,,5esv_C_D_F,False
4hfu,H,L,0,A,protein,,hemagglutinin ha1,VIRAL PROTEIN/IMMUNE SYSTEM,10/05/12,Crystal structure of Fab 8M2 in complex with a H2N2 influenza virus hemagglutinin,INFLUENZA A VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus,"Xu, R., Wilson, I.A.",3.106,X-RAY DIFFRACTION,0.251,0.193,False,True,IGHV1,IGKV3,Kappa,,,,,,4hfu_H_L_A,False
7ahv,A,B,0,H,protein,,coagulation factor ix,BLOOD CLOTTING,09/25/20,Anti-FIXa Fab of mim8 in complex with human FIXa,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Johansson, E.",3.11,X-RAY DIFFRACTION,0.284,0.227,False,True,IGHV3,IGKV1,Kappa,,,,,,7ahv_A_B_H,False
7vaf,H,L,0,A,protein,,sodium/bile acid cotransporter,TRANSPORT PROTEIN,08/29/21,Cryo-EM structure of Rat NTCP complexed with YN69202Fab,MUS MUSCULUS; RATTUS NORVEGICUS,mus musculus,mus musculus,rattus norvegicus,"Asami, J., Shimizu, T., Ohto, U.",3.11,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV8,Kappa,,,,,,7vaf_H_L_A,False
8bw0,H,L,0,C,protein,,carcinoembryonic antigen-related cell adhesion molecule 5,CELL ADHESION,01/24/24,Structure of CEACAM5 A3-B3 domain in Complex with Tusamitamab Fab,Homo sapiens; Mus sp.,mus sp.,mus sp.,homo sapiens,"Kumar, A., Bertrand, T., Rapisarda, C., Rak, A.",3.11,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGKV12,Kappa,,,,,,8bw0_H_L_C,False
8tzn,G,H,0,C,protein,,10e8-gt10.2 mper scaffold,IMMUNE SYSTEM,06/12/24,Crystal structure of 10E8-GT10.2 HIV-1 MPER scaffold in complex with a non-human primate W3-01 Fab,unidentified monkey,unidentified monkey,unidentified monkey,unidentified monkey,"Lee, C.C.D., Wilson, I.A.",3.11,X-RAY DIFFRACTION,0.284,0.246,False,True,IGHV4,IGLV3,Lambda,,,,,,8tzn_G_H_C,False
8tzn,B,D,0,A,protein,,10e8-gt10.2 mper scaffold,IMMUNE SYSTEM,06/12/24,Crystal structure of 10E8-GT10.2 HIV-1 MPER scaffold in complex with a non-human primate W3-01 Fab,unidentified monkey,unidentified monkey,unidentified monkey,unidentified monkey,"Lee, C.C.D., Wilson, I.A.",3.11,X-RAY DIFFRACTION,0.284,0.246,False,True,IGHV4,IGLV3,Lambda,,,,,,8tzn_B_D_A,False
9ixv,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN,04/30/25,Cryo-EM structure of MERS-CoV S1-NTD bound with KNIH-88 Fab,Homo sapiens; Middle East respiratory syndrome-related coronavirus,homo sapiens,homo sapiens,middle east respiratory syndrome-relatedcoronavirus ,"Jeon, H., Yoo, Y., Park, K., Choi, K.",3.11,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,9ixv_H_L_A,False
8rrn,H,L,0,A,protein,,spike protein s1,PROTEIN BINDING,10/30/24,Crystal structure of the SARS-CoV-2 S RBD in complex with pT1616 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,severe acute respiratory syndrome coronavirus2 ,severe acute respiratory syndrome coronavirus2 ,"Hansen, G., Krey, T.",3.11,X-RAY DIFFRACTION,0.291,0.243,False,True,IGHV1,IGLV1,Lambda,,,,,,8rrn_H_L_A,False
8rh2,D,E,0,C,protein,,envelope glycoprotein b,VIRAL PROTEIN,06/19/24,Trimeric HSV-2G gB ectodomain in postfusion conformation with three bound HDIT102 Fab molecules.,Homo sapiens; Human herpesvirus 2 strain G,homo sapiens,homo sapiens,human herpesvirus 2 strain g,"Kalbermatter, D., Seyfizadeh, N., Imhof, T., Ries, M., Mueller, C., Jenner, L., Blumenschein, E., Yendrzheyevskiy, A., Moog, K., Eckert, D., Engel, R., Diebolder, P., Chami, M., Krauss, J., Schaller, T., Arndt, M.",3.12,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV3,Lambda,,,,,,8rh2_D_E_C,False
7rr0,B,C,0,A,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,08/08/21,SARS-CoV-2 receptor binding domain bound to Fab PDI 222,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Pymm, P., Glukhova, A., Black, K.A., Tham, W.H.",3.12,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,7rr0_B_C_A,False
8v93,A,C,0,D,protein,,"type 1 fimbrin d-mannose specific adhesin fimh, donorstrand complemented with fimg peptide 'triple mutant' ",CELL ADHESION/IMMUNE SYSTEM,12/18/24,Cryo-EM structure of E. coli FimH lectin domain bound to Fabs 329-2 and 454-3,Escherichia coli; Mus musculus,mus musculus,mus musculus,escherichia coli,"Lees, J.A., Han, S.",3.12,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV12,Kappa,,,,,,8v93_A_C_D,False
8dnn,E,F,0,D,protein,,spike protein s1,IMMUNE SYSTEM/VIRAL PROTEIN,05/24/23,Crystal structure of neutralizing antibody 80 in complex with SARS-CoV-2 receptor binding domain,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Muthuraman, K., Kucharska, I., Ivanochko, D., Julien, J.P.",3.12,X-RAY DIFFRACTION,0.252,0.193,False,True,IGHV1,IGKV4,Kappa,,,,,,8dnn_E_F_D,False
8v93,B,L,0,D,protein,,"type 1 fimbrin d-mannose specific adhesin fimh, donorstrand complemented with fimg peptide 'triple mutant' ",CELL ADHESION/IMMUNE SYSTEM,12/18/24,Cryo-EM structure of E. coli FimH lectin domain bound to Fabs 329-2 and 454-3,Escherichia coli; Mus musculus,mus musculus,mus musculus,escherichia coli,"Lees, J.A., Han, S.",3.12,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGKV5,Kappa,,,,,,8v93_B_L_D,False
8w0x,H,L,0,C,protein,,envelope glycoprotein e2,IMMUNE SYSTEM/VIRAL PROTEIN,03/27/24,Crystal structure of broadly neutralizing antibody hcab40 in complex with Hepatitis C virus envelope glycoprotein E2 ectodomain,Hepacivirus hominis; Homo sapiens,homo sapiens,homo sapiens,hepacivirus hominis,"Flyak, A.I., Wilcox, X.E.",3.12,X-RAY DIFFRACTION,0.271,0.227,False,True,IGHV4,IGKV1,Kappa,,,,,,8w0x_H_L_C,False
7k7i,M,N,0,C,protein,,putative pertussis-like toxin subunit,TOXIN,09/22/20,Density-fitted Model Structure of Antibody Variable Domains of TyTx4 in Complex with PltB pentamer of Typhoid Toxin,SALMONELLA TYPHI; MUS MUSCULUS,mus musculus,mus musculus,salmonella typhi,"Nguyen, T., Feathers, J.R., Fromme, J.C., Song, J.",3.13,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGKV5,Kappa,,,,,,7k7i_M_N_C,False
6pe9,K,M,0,J,protein,,tumor necrosis factor receptor superfamily member 5,IMMUNE SYSTEM,06/20/19,Crystal Structure of CD40 complexed to FAB516,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Argiriadi, M.A.",3.13,X-RAY DIFFRACTION,0.255,0.216,False,True,IGHV3,IGKV4,Kappa,,,,,,6pe9_K_M_J,False
8dww,X,W,0,O,protein,,e2 glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,05/31/23,Chikungunya VLP in complex with neutralizing Fab 506.A08 (asymmetric unit),Chikungunya virus strain Senegal 37997; Homo sapiens,homo sapiens,homo sapiens,chikungunya virus strain senegal 37997,"Adams, L.J., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID)",3.13,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8dww_X_W_O,False
6r0x,A,B,0,E,protein,,megakaryocyte and platelet inhibitory receptor g6b,BLOOD CLOTTING,03/13/19,The extracellular domain of G6b-B in complex with Fab fragment and DP12 heparin oligosaccharide.,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Ogg, D.J., McMiken, H.J., Howard, T.D.",3.13,X-RAY DIFFRACTION,0.266,0.230,False,True,IGHV14,IGKV10,Kappa,,,,,,6r0x_A_B_E,False
8wz4,H,L,0,C,protein,,rsv fusion glycoprotein,VIRAL PROTEIN,11/06/24,Cryo-EM structure of prefusion-stabilized RSV F (DS-Cav1 strain: A2) in complex with nAb 5B11 (localized refinement),Human respiratory syncytial virus A2; Mus musculus,mus musculus,mus musculus,human respiratory syncytial virus a2,"Liu, L., Sun, H., Sun, Y., Zheng, Q., Li, S., Zheng, Z., Xia, N.",3.13,ELECTRON MICROSCOPY,,,False,True,IGHV9,IGKV12,Kappa,,,,,,8wz4_H_L_C,False
6fy1,Y,Z,0,X,protein,,cap228 autologous scaffolded v1v2,IMMUNE SYSTEM,03/10/18,"Crystal structure of a V2p-reactive RV144 vaccine-like antibody, CAP228-16H, in complex with a scaffolded autologous V1V2",HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Wibmer, C.K., Moore, P.L., Morris, L.",3.132,X-RAY DIFFRACTION,0.271,0.221,False,True,IGHV5,IGLV3,Lambda,,,,,,6fy1_Y_Z_X,False
8czz,C,D,0,B,protein,,crf-1_ae t/f100 hiv-1 gp41,VIRAL PROTEIN/INHIBITOR,05/31/23,"Cryo-EM structure of T/F100 SOSIP.664 HIV-1 Env trimer with LMHS mutations in complex with Temsavir, 8ANC195, and 10-1074",Homo sapiens; Human immunodeficiency virus 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Chen, Y., Pozharskiy, E., Tolbert, W., Pazgier, M.",3.14,ELECTRON MICROSCOPY,,,False,True,unknown,IGKV1,Kappa,,,,,,8czz_C_D_B,False
7e88,D,E,0,F,protein,,spike protein s1,"VIRAL PROTEIN,IMMUNE SYSTEM",03/01/21,Crystal structure of the SARS-CoV-2 S RBD in complex with BD-515 Fab,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Gao, C., Wei, Y., Xiao, J.",3.14,X-RAY DIFFRACTION,0.255,0.217,False,True,IGHV3,IGKV1,Kappa,,,,,,7e88_D_E_F,False
8t6m,B,A,0,E,protein,,mhc class i antigen,IMMUNE SYSTEM,12/25/24,Human leukocyte antigen bound by two alloreactive antibody Fabs,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Kizziah, J.L., Killian, J.T., Diaz-Avalos, R., Qiu, S., Yang, G., Green, T., Lund, F.E.",3.14,ELECTRON MICROSCOPY,,,False,True,IGHV2,IGKV1,Kappa,,,,,,8t6m_B_A_E,False
8f92,P,R,0,F,protein,,bg505_md39_b11 gp120,VIRAL PROTEIN/IMMUNE SYSTEM,01/08/09,HIV Env BG505_MD39_B11 SOSIP boosting trimer in complex with B11_d77.7 mouse Fab and RM20A3 Fab,Human immunodeficiency virus; Macaca mulatta; Mus musculus,mus musculus,mus musculus,human immunodeficiency virus,"Torres, J.L., Ozorowski, G., Ward, A.B.",3.14,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV12,Kappa,,,,,,8f92_P_R_F,False
7yhk,F,H,0,A,protein,,hemagglutinin,VIRAL PROTEIN/IMMUNE SYSTEM,08/17/22,Cryo-EM structure of the HA trimer of A/Beijing/262/1995(H1N1) in complex with neutralizing antibody 12H5,Influenza A virus (A/Beijing/262/1995(H1N1)); Mus musculus,mus musculus,mus musculus,influenza a virus (a/beijing/262/1995(h1n1)),"Zheng, Q., Li, S., Li, T., Xue, W., Sun, H.",3.14,ELECTRON MICROSCOPY,,,False,False,IGHV9,IGKV3,Kappa,,,,,,7yhk_F_H_A,False
5i6x,B,C,0,A,protein,,sodium-dependent serotonin transporter,MEMBRANE PROTEIN,02/16/16,X-ray structure of the ts3 human serotonin transporter complexed with paroxetine at the central site,MUS MUSCULUS; HOMO SAPIENS,mus musculus,mus musculus,homo sapiens,"Coleman, J.A., Green, E.M., Gouaux, E.",3.14,X-RAY DIFFRACTION,0.270,0.238,False,True,IGHV1,IGKV6,Kappa,,,,,,5i6x_B_C_A,False
7ps5,H,L,0,E,protein,,surface glycoprotein,VIRAL PROTEIN,09/22/21,Crystal structure of the receptor binding domain of SARS-CoV-2 beta variant spike glycoprotein in complex with Beta-47 Fab,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, D., Ren, J., Stuart, D.I.",3.14,X-RAY DIFFRACTION,0.274,0.226,False,True,IGHV1,IGKV3,Kappa,,,,,,7ps5_H_L_E,False
1adq,H,L,0,A,protein,,igg4 rea fc,COMPLEX (IMMUNOGLOBULIN/AUTOANTIGEN),02/18/97,CRYSTAL STRUCTURE OF A HUMAN IGM RHEUMATOID FACTOR FAB IN COMPLEX WITH ITS AUTOANTIGEN IGG FC,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Corper, A.L., Taussig, M.J., Sutton, B.J.",3.15,X-RAY DIFFRACTION,0.289,0.225,False,False,IGHV3,IGLV3,Lambda,,,,,,1adq_H_L_A,False
6a4k,K,O,0,D,protein,,hemagglutinin,VIRAL PROTEIN/IMMUNE SYSTEM,06/20/18,Human antibody 32D6 Fab in complex with H1N1 influenza A virus HA1,INFLUENZA A VIRUS (A/CALIFORNIA/7/2009(H1N1)); HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus (a/california/7/2009(h1n1)),"Lee, C.C., Ko, T.P., Lin, L.L., Wang, A.H.J.",3.15,X-RAY DIFFRACTION,0.233,0.175,False,True,IGHV4,IGLV4,Lambda,,,,,,6a4k_K_O_D,False
6wqo,E,F,0,D,protein,,reticulocyte binding protein 2b,CELL INVASION,04/29/20,Plasmodium vivax reticulocyte binding protein 2b (PvRBP2b) bound to human monoclonal antibody 283284,PLASMODIUM VIVAX (STRAIN SALVADOR I); HOMO SAPIENS,homo sapiens,homo sapiens,plasmodium vivax (strain salvador i),"Chan, L.J., Dietrich, M.H., Tham, W.H.",3.15,X-RAY DIFFRACTION,0.305,0.254,False,True,IGHV4,IGKV1,Kappa,,,,,,6wqo_E_F_D,False
6wn1,B,C,0,A,protein,,reticulocyte binding protein 2b,CELL INVASION,04/22/20,Plasmodium vivax reticulocyte binding protein 2b (PvRBP2b) bound to human monoclonal antibody 241242,PLASMODIUM VIVAX SAL-1; HOMO SAPIENS,homo sapiens,homo sapiens,plasmodium vivax sal-1,"Chan, L.J., Dietrich, M.H., Tham, W.H.",3.15,X-RAY DIFFRACTION,0.283,0.251,False,True,IGHV3,IGLV3,Lambda,,,,,,6wn1_B_C_A,False
6ww5,C,D,0,B,protein,,dass family sodium-coupled anion symporter,MEMBRANE PROTEIN,05/07/20,Structure of VcINDY-Na-Fab84 in nanodisc,VIBRIO CHOLERAE; HOMO SAPIENS,homo sapiens,homo sapiens,vibrio cholerae,"Sauer, D.B., Marden, J., Song, J.M., Koide, A., Koide, S., Wang, D.N.",3.15,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,6ww5_C_D_B,False
4y5x,J,K,0,L,protein,,erythropoietin receptor,protein binding/immune system,02/12/15,Diabody 305 complex with EpoR,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Moraga, I., Guo, F., Ozkan, E., Jude, K.M., Garcia, K.C.",3.15,X-RAY DIFFRACTION,0.241,0.201,False,True,IGHV3,IGLV1,Lambda,,,,,,4y5x_J_K_L,False
5bk0,B,A,0,E,peptide,,circumsporozoite protein nanp 5-mer,IMMUNE SYSTEM,09/12/17,Crystal structure of 663 Fab bound to circumsporozoite protein NANP 5-mer,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,plasmodium falciparum,"Scally, S.W., Bosch, A., Triller, G., Wardemann, H., Julien, J.P.",3.15,X-RAY DIFFRACTION,0.274,0.235,False,True,IGHV3,IGKV2,Kappa,,,,,,5bk0_B_A_E,False
4jan,H,L,0,G,protein,,envelope glycoprotein gp120 of hiv-1 clade c,viral protein/immune system,02/18/13,crystal structure of broadly neutralizing antibody CH103 in complex with HIV-1 gp120,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Zhou, T., Moquin, S., Zheng, A., Srivatsan, S., Kwong, P.D.",3.15,X-RAY DIFFRACTION,0.256,0.196,False,True,IGHV4,IGLV3,Lambda,2e-08,-10.503274322962254,SPR,,TBD,4jan_H_L_G,False
9irb,H,L,0,A,protein,,solute carrier family 15 member 4,MEMBRANE PROTEIN/IMMUNE SYSTEM,08/20/25,CryoEM structure of hSLC15A4+Fab107,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Zhu, Y.L., Zhang, Q.X., Gao, P.",3.15,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV6,Kappa,,,,,,9irb_H_L_A,False
6wn1,E,F,0,D,protein,,reticulocyte binding protein 2b,CELL INVASION,04/22/20,Plasmodium vivax reticulocyte binding protein 2b (PvRBP2b) bound to human monoclonal antibody 241242,PLASMODIUM VIVAX SAL-1; HOMO SAPIENS,homo sapiens,homo sapiens,plasmodium vivax sal-1,"Chan, L.J., Dietrich, M.H., Tham, W.H.",3.15,X-RAY DIFFRACTION,0.283,0.251,False,True,IGHV3,IGLV3,Lambda,,,,,,6wn1_E_F_D,False
9k3t,h,l,0,A,protein,,transmembrane protease serine 2,MEMBRANE PROTEIN,10/15/25,Cryo-EM structure of TMPRSS2 in complex with Fab fragments of 752 mAb and 2228 mAb,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Katsura, K., Hisano, T., Matsumoto, T., Shirouzu, M.",3.15,ELECTRON MICROSCOPY,,,False,False,IGHV1,IGKV3,Kappa,,,,,,9k3t_h_l_A,False
7x2o,H,L,0,B,protein,,vp2,VIRUS,09/28/22,Cryo-EM structure of Coxsackievirus B1 mature virion in complex with nAb 2E6 (CVB1-M:2E6),Coxsackievirus B1; Mus musculus,mus musculus,mus musculus,coxsackievirus b1,"Zheng, Q., Zhu, R., Sun, H., Cheng, T., Li, S., Xia, N.",3.15,ELECTRON MICROSCOPY,,,False,False,IGHV2,IGKV12,Kappa,,,,,,7x2o_H_L_B,False
9k3t,H,L,0,A,protein,,transmembrane protease serine 2,MEMBRANE PROTEIN,10/15/25,Cryo-EM structure of TMPRSS2 in complex with Fab fragments of 752 mAb and 2228 mAb,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Katsura, K., Hisano, T., Matsumoto, T., Shirouzu, M.",3.15,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV19,Kappa,,,,,,9k3t_H_L_A,False
9e6k,H,L,0,C,protein,,disintegrin and metalloproteinase domain-containing protein17 ,ANTITUMOR PROTEIN/IMMUNE SYSTEM,11/20/24,Fully human monoclonal antibody targeting the cysteine-rich substrate-interacting region of ADAM17 on cancer cells.,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Saha, N., De La Cruz, M.J., Goldgur, Y., Nikolov, D.B.",3.15,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV3,Kappa,,,,,,9e6k_H_L_C,False
8tnt,G,F,0,C,protein,,glycoprotein 42,IMMUNE SYSTEM,03/27/24,Crystal structure of Epstein-Barr virus gH/gL/gp42 in complex with antibodies F-2-1 and 769C2,Epstein-Barr virus; Homo sapiens; Mus musculus,mus musculus,mus musculus,epstein-barr virus,"Bu, W., Kumar, A., Board, N., Kim, J., Dowdell, K., Zhang, S., Lei, Y., Hostal, A., Krogmann, T., Wang, Y., Pittaluga, S., Marcotrigiano, J., Cohen, J.I.",3.15,X-RAY DIFFRACTION,0.287,0.255,False,True,IGHV4,IGKV3,Kappa,,,,,,8tnt_G_F_C,False
7pa8,Y,F,0,E,protein,,unknown,VIRAL PROTEIN,01/08/09,JC polyomavirus VP1 in complex with Fab 27C2,Homo sapiens; JC polyomavirus,,,,"Stroeh, L.J., Harprecht, C., Freytag, J., Stehle, T.",3.15,X-RAY DIFFRACTION,0.241,0.212,False,False,IGHV3,IGLV1,Lambda,,,,,,7pa8_Y_F_E,False
7pa8,H,G,0,C,protein,,unknown,VIRAL PROTEIN,01/08/09,JC polyomavirus VP1 in complex with Fab 27C2,Homo sapiens; JC polyomavirus,,,,"Stroeh, L.J., Harprecht, C., Freytag, J., Stehle, T.",3.15,X-RAY DIFFRACTION,0.241,0.212,False,False,IGHV3,IGLV1,Lambda,,,,,,7pa8_H_G_C,False
7pa8,N,M,0,D,protein,,unknown,VIRAL PROTEIN,01/08/09,JC polyomavirus VP1 in complex with Fab 27C2,Homo sapiens; JC polyomavirus,,,,"Stroeh, L.J., Harprecht, C., Freytag, J., Stehle, T.",3.15,X-RAY DIFFRACTION,0.241,0.212,False,False,IGHV3,IGLV1,Lambda,,,,,,7pa8_N_M_D,False
7pa8,J,I,0,B,protein,,unknown,VIRAL PROTEIN,01/08/09,JC polyomavirus VP1 in complex with Fab 27C2,Homo sapiens; JC polyomavirus,,,,"Stroeh, L.J., Harprecht, C., Freytag, J., Stehle, T.",3.15,X-RAY DIFFRACTION,0.241,0.212,False,False,IGHV3,IGLV1,Lambda,,,,,,7pa8_J_I_B,False
7pa8,L,K,0,A,protein,,unknown,VIRAL PROTEIN,01/08/09,JC polyomavirus VP1 in complex with Fab 27C2,Homo sapiens; JC polyomavirus,,,,"Stroeh, L.J., Harprecht, C., Freytag, J., Stehle, T.",3.15,X-RAY DIFFRACTION,0.241,0.212,False,False,IGHV3,IGLV1,Lambda,,,,,,7pa8_L_K_A,False
7fah,H,L,0,A,protein,,hemagglutinin,VIRAL PROTEIN/IMMUNE SYSTEM,07/06/22,Immune complex of head region of CA09 HA and neutralizing antibody 12H5,Influenza A virus (strain swl A/California/04/2009 H1N1); Mus musculus,mus musculus,mus musculus,influenza a virus (strain swla/california/04/2009 h1n1) ,"Li, T.T., Xue, W.H., Gu, Y., Li, S.W.",3.151,X-RAY DIFFRACTION,0.290,0.266,False,False,IGHV9,IGKV3,Kappa,,,,,,7fah_H_L_A,False
6cwt,A,B,0,E,protein,,capsid protein,VIRAL PROTEIN/IMMUNE SYSTEM,03/30/18,Hepatitis B core-antigen in complex with Fab e21,ORYCTOLAGUS CUNICULUS; HEPATITIS B VIRUS GENOTYPE D SUBTYPE ADW,oryctolagus cuniculus,oryctolagus cuniculus,hepatitis b virus genotype d subtype adw,"Eren, E., Steven, A.C., Wingfield, P.T.",3.151,X-RAY DIFFRACTION,0.283,0.231,False,True,IGHV1,IGKV1,Kappa,2e-12,-15.960250680603272,AUC,,TBD,6cwt_A_B_E,False
8pe9,H,L,0,A,protein,,epithelial discoidin domain-containing receptor 1,IMMUNE SYSTEM,06/28/23,Complex between DDR1 DS-like domain and PRTH-101 Fab,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Liu, J., Chiang, H., Xiong, W., Laurent, V., Griffiths, S.C., Duelfer, J., Deng, H., Sun, X., Yin, Y.W., Li, W., Audoly, L.P., An, Z., Schuerpf, T., Li, R., Zhang, N.",3.152,X-RAY DIFFRACTION,0.309,0.278,False,True,IGHV3,IGKV1,Kappa,,,,,,8pe9_H_L_A,False
9mqr,D,E,0,A,protein,,adhesion g protein-coupled receptor e5,IMMUNE SYSTEM,09/24/25,A8 Fab in complex with CD97,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Hattori, T., Bang, I., Fang, M., Koide, S.",3.16,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,9mqr_D_E_A,False
8smt,A,B,0,C,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,06/28/23,Crystal structure of antibody WRAIR-2134 in complex with SARS-CoV-2 receptor binding domain,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Sankhala, R.S., Jensen, J.L., Joyce, M.G.",3.16,X-RAY DIFFRACTION,0.249,0.214,False,True,IGHV3,IGLV3,Lambda,,,,,,8smt_A_B_C,False
8zhe,F,G,0,C,protein,,"spike glycoprotein,fibritin,expression tag",VIRAL PROTEIN/IMMUNE SYSTEM,08/21/24,SARS-CoV-2 spike trimer (6P) in complex with three R1-26 Fabs,Enterobacteria phage T6; Homo sapiens; Severe acute respiratory syndrome coronavirus 2; synthetic construct,homo sapiens,homo sapiens,"severe acute respiratory syndrome coronavirus2, enterobacteria phage t6, synthetic construct ","Yan, Q., Gao, X., Liu, B., Hou, R., He, P., Li, Z., Chen, Q., Wang, J., He, J., Chen, L., Zhao, J., Xiong, X.",3.16,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV6,Lambda,,,,,,8zhe_F_G_C,False
7e8c,D,E,0,C,protein,,spike glycoprotein,VIRAL PROTEIN,03/01/21,SARS-CoV-2 S-6P in complex with 9 Fabs,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Du, S., Xiao, J., Zhang, Z.",3.16,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7e8c_D_E_C,False
7e8c,M,J,0,A,protein,,368-2 h,VIRAL PROTEIN,03/01/21,SARS-CoV-2 S-6P in complex with 9 Fabs,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Du, S., Xiao, J., Zhang, Z.",3.16,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV2,Kappa,,,,,,7e8c_M_J_A,False
7mkm,H,L,0,A,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,04/24/21,SARS-CoV-2 Spike RBD in complex with neutralizing Fab SARS2-38 (local refinement),SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; MUS MUSCULUS,mus musculus,mus musculus,severe acute respiratory syndrome coronavirus2 ,"Adams, L.J., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID)",3.16,ELECTRON MICROSCOPY,,,False,False,IGHV2,IGKV4,Kappa,,,,,,7mkm_H_L_A,False
8eqf,H,L,0,A,protein,,spike protein s1,IMMUNE SYSTEM,10/11/23,cryoEM structure of a broadly neutralizing anti-SARS-CoV-2 antibody STI-9167,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Bajic, G.",3.16,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8eqf_H_L_A,False
8cbe,H,L,0,E,protein,,spike protein s1,VIRAL PROTEIN,02/07/24,SARS-CoV-2 Delta-RBD complexed with BA.4/5-2 and Beta-49 Fabs,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, D., Ren, J., Stuart, D.I.",3.16,X-RAY DIFFRACTION,0.266,0.226,False,True,IGHV3,IGKV3,Kappa,,,,,,8cbe_H_L_E,False
4zs6,H,L,0,A,protein,,s protein,IMMUNE SYSTEM,05/13/15,Receptor binding domain and Fab complex,HOMO SAPIENS; MIDDLE EAST RESPIRATORY SYNDROME CORONAVIRUS,homo sapiens,homo sapiens,middle east respiratory syndrome coronavirus,"Yu, X., Wang, X.",3.166,X-RAY DIFFRACTION,0.245,0.203,False,True,IGHV3,IGKV1,Kappa,3.12e-07,-8.875561141727196,SPR,,TBD,4zs6_H_L_A,True
6h3u,H,L,0,B,protein,,envelopment polyprotein,VIRAL PROTEIN,07/19/18,Schmallenberg Virus Glycoprotein Gc Head Domain in Complex with scFv 4B6,MUS MUSCULUS; BOVINE SCHMALLENBERG VIRUS,mus musculus,mus musculus,bovine schmallenberg virus,"Hellert, J., Aebischer, A., Wernike, K., Haouz, A., Brocchi, E., Reiche, S., Guardado-Calvo, P., Beer, M., Rey, F.A.",3.168,X-RAY DIFFRACTION,0.228,0.200,False,True,IGHV3,IGKV10,Kappa,,,,,,6h3u_H_L_B,False
8tvj,H,L,0,E,protein,,outer surface protein a,IMMUNE SYSTEM/Membrane Protein,08/28/24,Fab 227-1 in complex with OspA,Borreliella burgdorferi B31; Homo sapiens,homo sapiens,homo sapiens,borreliella burgdorferi b31,"Rudolph, M.J., Mantis, N.",3.168,X-RAY DIFFRACTION,0.295,0.235,False,True,IGHV5,IGKV1,Kappa,,,,,,8tvj_H_L_E,False
6pzy,C,D,0,A,protein,,neuraminidase,VIRAL PROTEIN/IMMUNE SYSTEM,08/01/19,CryoEM derived model of NA-73 Fab in complex with N9 Shanghai2,INFLUENZA A VIRUS (A/ENVIRONMENT/SHANGHAI/S1439/2013(H7N9)); HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus(a/environment/shanghai/s1439/2013(h7n9)) ,"Ward, A.B., Turner, H.L., Zhu, X.",3.17,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGLV1,Lambda,,,,,,6pzy_C_D_A,False
5d1z,F,E,0,J,protein,,iron-regulated surface determinant protein b,IMMUNE SYSTEM,08/04/15,IsdB NEAT1 bound by clone D4-10,HOMO SAPIENS; STAPHYLOCOCCUS AUREUS (STRAIN MSSA476),homo sapiens,homo sapiens,staphylococcus aureus (strain mssa476),"Deng, X.",3.17,X-RAY DIFFRACTION,0.287,0.233,False,True,IGHV4,IGKV1,Kappa,,,,,,5d1z_F_E_J,False
9ccs,C,B,0,A,protein,,type 1 fimbiral adhesin fimh,CELL ADHESION,07/02/25,CryoEM Structure of Escherichia coli FimCH in complex with 2H04 Fab,Escherichia coli UTI89; Mus musculus,mus musculus,mus musculus,escherichia coli uti89,"Lopatto, E.D.B., Hultgren, S.J.",3.17,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV4,Kappa,,,,,,9ccs_C_B_A,False
5d1z,G,H,0,J,protein,,iron-regulated surface determinant protein b,IMMUNE SYSTEM,08/04/15,IsdB NEAT1 bound by clone D4-10,HOMO SAPIENS; STAPHYLOCOCCUS AUREUS (STRAIN MSSA476),homo sapiens,homo sapiens,staphylococcus aureus (strain mssa476),"Deng, X.",3.17,X-RAY DIFFRACTION,0.287,0.233,False,True,IGHV3,IGKV1,Kappa,,,,,,5d1z_G_H_J,False
6bp2,H,L,0,A,protein,,envelope glycoprotein,VIRAL PROTEIN/immune system,11/21/17,Therapeutic human monoclonal antibody MR191 bound to a marburgvirus glycoprotein,MARBURG MARBURGVIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,marburg marburgvirus,"King, L.B., Fusco, M.L., Flyak, A.I., Ilinykh, P.A., Huang, K., Gunn, B., Kirchdoerfer, R.N., Hastie, K.M., Sangha, A.K., Meiler, J., Alter, G., Bukreyev, A., Crowe, J.E.J., Saphire, E.O.",3.172,X-RAY DIFFRACTION,0.284,0.252,False,True,IGHV4,IGLV1,Lambda,,,,,,6bp2_H_L_A,False
9myl,A,B,0,D,protein,,izumo sperm-egg fusion protein 1,CELL ADHESION,03/19/25,Fertilization IZUMO1 Protein Ectodomain in Complex with Anti-sperm Antibody OBF13,Mus musculus,mus musculus,mus musculus,mus musculus,"Tang, S.",3.177,X-RAY DIFFRACTION,0.263,0.212,False,True,IGHV14,IGKV6,Kappa,,,,,,9myl_A_B_D,False
7t72,H,L,0,A,protein,,spike protein s1,VIRAL PROTEIN,12/21/22,Epitope-based selection of SARS-CoV-2 neutralizing antibodies from convalescent patients,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Langley, D.B., Christ, D., Rouet, R.",3.177,X-RAY DIFFRACTION,0.308,0.237,False,True,IGHV3,IGKV1,Kappa,,,,,,7t72_H_L_A,False
4xmk,H,L,0,P,peptide,,hiv-1 jr-fl gp120 v3 peptide,immune system/viral protein,01/14/15,Crystal structure of Fab of HIV-1 gp120 V3-specific human monoclonal antibody 2424 in complex with JR-FL V3 peptide,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Kong, X.-P., Pan, R.",3.179,X-RAY DIFFRACTION,0.283,0.225,False,True,IGHV3,IGKV2,Kappa,,,,,,4xmk_H_L_P,False
8dwy,V,U,0,M,protein,,e2 glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,05/31/23,Chikungunya VLP in complex with neutralizing Fab CHK-265 (asymmetric unit),Chikungunya virus strain Senegal 37997; Homo sapiens,homo sapiens,homo sapiens,chikungunya virus strain senegal 37997,"Adams, L.J., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID)",3.18,ELECTRON MICROSCOPY,,,False,True,IGHV9,IGLV1,Lambda,,,,,,8dwy_V_U_M,False
8f0h,B,D,0,C,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,05/03/23,Structure of SARS-CoV-2 spike with antibody Fabs 2A10 and 1H2 (Local refinement of the RBD and Fabs 1H2 and 2A10),Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Yu, X., Zyla, D., Hastie, K.M., Saphire, E.O.",3.18,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV3,Lambda,,,,,,8f0h_B_D_C,False
9kzz,J,N,0,C,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,12/10/25,Structure of SARS-CoV-2 EG.5.1 Variant Spike protein complexed with antibody XGi-171,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Qiu, Y.N., Sun, L.",3.18,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,9kzz_J_N_C,False
7l5b,H,L,0,A,protein,,spike protein s1,VIRAL PROTEIN/Immune System,12/21/20,Crystallographic structure of neutralizing antibody 2-15 in complex with SARS-CoV-2 spike receptor-binding Domain (RBD).,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Reddem, E.R., Shapiro, L.",3.18,X-RAY DIFFRACTION,0.239,0.187,False,True,IGHV1,IGLV2,Lambda,,,,,,7l5b_H_L_A,False
9lly,J,O,0,C,protein,,rsv pre-f protein,VIRAL PROTEIN/IMMUNE SYSTEM,01/21/26,"Cryo-EM structure of RSV pre-F (sc9-10 DS-Cav1, strain A2) in complex with Fabs 1A2 and 1B6",Homo sapiens; Respiratory syncytial virus A2,homo sapiens,homo sapiens,respiratory syncytial virus a2,"Liu, L., Zheng, Q., Li, S.",3.18,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV2,Kappa,,,,,,9lly_J_O_C,False
9lly,F,M,0,C,protein,,rsv pre-f protein,VIRAL PROTEIN/IMMUNE SYSTEM,01/21/26,"Cryo-EM structure of RSV pre-F (sc9-10 DS-Cav1, strain A2) in complex with Fabs 1A2 and 1B6",Homo sapiens; Respiratory syncytial virus A2,homo sapiens,homo sapiens,respiratory syncytial virus a2,"Liu, L., Zheng, Q., Li, S.",3.18,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV1,Kappa,,,,,,9lly_F_M_C,False
8f0h,H,L,0,C,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,05/03/23,Structure of SARS-CoV-2 spike with antibody Fabs 2A10 and 1H2 (Local refinement of the RBD and Fabs 1H2 and 2A10),Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Yu, X., Zyla, D., Hastie, K.M., Saphire, E.O.",3.18,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8f0h_H_L_C,False
5c0r,H,L,0,A,protein,,"hemagglutinin, envelope glycoprotein, fibritin fusionprotein ",VIRAL PROTEIN/IMMUNE SYSTEM,06/12/15,Crystal Structure of a Generation 3 Influenza Hemagglutinin Stabilized Stem Complexed with the Broadly Neutralizing Antibody C179,"MUS MUSCULUS; INFLUENZA A VIRUS, HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 GROUP M SUBTYPE B, ENTEROBACTERIA PHAGE T4",mus musculus,mus musculus,"influenza a virus, human immunodeficiency virustype 1 group m subtype b, enterobacteria phage t4 ","Boyington, J.C., kwong, P.D., Nabel, G.J., Mascola, J.R.",3.188,X-RAY DIFFRACTION,0.251,0.199,False,True,IGHV7,IGKV12,Kappa,,,,,,5c0r_H_L_A,False
5czv,H,L,0,A,protein,,neurogenic locus notch homolog protein 3,IMMUNE SYSTEM,08/01/15,Crystal structure of Notch3 NRR in complex with 20350 Fab,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Hu, T., Fryer, C., Chopra, R., Clark, K.",3.19,X-RAY DIFFRACTION,0.257,0.204,False,True,IGHV1,IGKV1,Kappa,3e-10,-12.991531042419238,SPR,,TBD,5czv_H_L_A,False
7dk0,A,B,0,C,protein,,spike protein s1,IMMUNE SYSTEM/VIRAL PROTEIN,11/22/20,Crystal structure of SARS-CoV-2 Spike RBD in complex with MW05 Fab,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Wang, J., Jiao, S., Wang, R., Zhang, J., Zhang, M., Wang, M.",3.199,X-RAY DIFFRACTION,0.265,0.218,False,True,IGHV1,IGKV3,Kappa,,,,,,7dk0_A_B_C,False
7njz,H,L,0,C,peptide,,region from c-c chemokine receptor type 5 n-terminaldomain ,IMMUNE SYSTEM,02/17/21,"X-ray crystallography study of RoAb13 which binds to PIYDIN, a part of the CCR5 N terminal domain",MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Helliwell, J.R., Chayen, N., Saridakis, E., Govada, L.",3.2,X-RAY DIFFRACTION,0.292,0.269,False,False,IGHV5,IGKV8,Kappa,,,,,,7njz_H_L_C,False
4ut6,I,M,0,B,protein,,envelope glycoprotein e,VIRAL PROTEIN,07/18/14,Crystal structure of dengue 2 virus envelope glycoprotein in complex  with the Fab fragment of the broadly neutralizing human antibody EDE2  B7,HOMO SAPIENS; DENGUE VIRUS 2,homo sapiens,homo sapiens,dengue virus 2,"ROUVINSKI, A., GUARDADO-CALVO, P., BARBA-SPAETH, G., DUQUERROY, S., VANEY, M.C., REY, F.A.",3.2,X-RAY DIFFRACTION,0.2500,0.2120,False,True,IGHV3,IGLV2,Lambda,,,,,,4ut6_I_M_B,False
5cus,J,N,0,C,protein,,receptor tyrosine-protein kinase erbb-3,TRANSFERASE,07/25/15,Crystal Structure of sErbB3-Fab3379 Complex,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Lee, S., Schlessinger, J.",3.2,X-RAY DIFFRACTION,0.278,0.252,False,True,IGHV3,IGLV1,Lambda,,,,,,5cus_J_N_C,False
7sc1,P,Q,0,C,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,09/26/21,"Structure of the SARS-CoV-2 S 6P trimer in complex with the human neutralizing antibody Fab fragment, R40-1G8",SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Fan, C., Bjorkman, P.J.",3.2,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7sc1_P_Q_C,False
3qum,B,A,0,P,protein,,prostate-specific antigen,IMMUNE SYSTEM,02/24/11,Crystal structure of human prostate specific antigen (PSA) in Fab sandwich with a high affinity and a PCa selective antibody,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Stura, E.A., Muller, B.H., Michel, S., Ducancel, F.",3.2,X-RAY DIFFRACTION,0.294,0.198,False,False,IGHV1,IGKV3,Kappa,,,,,,3qum_B_A_P,False
7ws0,G,F,0,B,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,01/28/22,Structures of Omicron Spike complexes illuminate broad-spectrum neutralizing antibody development,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Guo, H., Gao, Y., Ji, X., Yang, H.",3.2,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7ws0_G_F_B,False
8t4l,O,Q,0,E,protein,,md65 n332-gt5 sosip gp120,VIRAL PROTEIN/Immune System,01/08/09,MD65 N332-GT5 SOSIP in complex with RM_N332_07 Fab and RM20A3 Fab,Human immunodeficiency virus 1; Macaca mulatta,macaca mulatta,macaca mulatta,human immunodeficiency virus 1,"Ozorowski, G., Torres, J.L., Ward, A.B.",3.2,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGLV1,Lambda,,,,,,8t4l_O_Q_E,False
4hg4,V,W,0,G,protein,,hemagglutinin ha2,VIRAL PROTEIN/IMMUNE SYSTEM,10/06/12,Crystal structure of Fab 2G1 in complex with a H2N2 influenza virus hemagglutinin,INFLUENZA A VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus,"Xu, R., Wilson, I.A.",3.2,X-RAY DIFFRACTION,0.302,0.249,False,True,IGHV1,IGKV1,Kappa,,,,,,4hg4_V_W_G,False
4tnw,X,i,0,S,protein,,avermectin-sensitive glutamate-gated chloride channel gluclalpha ,TRANSPORT PROTEIN/IMMUNE SYSTEM,06/05/14,C. elegans glutamate-gated chloride channel (GluCl) in complex with Fab and POPC in a lipid-modulated conformation,CAENORHABDITIS ELEGANS; MUS MUSCULUS,mus musculus,mus musculus,caenorhabditis elegans,"Althoff, T., Hibbs, R.E., Banerjee, S., Gouaux, E.",3.2,X-RAY DIFFRACTION,0.251,0.227,False,False,unknown,unknown,unknown,,,,,,4tnw_X_i_S,False
3n85,H,L,0,A,protein,,receptor tyrosine-protein kinase erbb-2,Transferase/immune system,05/27/10,Crystallographic trimer of HER2 extracellular regions in complex with tryptophan-rich antibody fragment,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Eigenbrot, C.",3.2,X-RAY DIFFRACTION,0.230,0.206,False,True,IGHV3,IGKV1,Kappa,7.9e-10,-12.41,SPR,,20654626,3n85_H_L_A,True
5cus,K,O,0,D,protein,,receptor tyrosine-protein kinase erbb-3,TRANSFERASE,07/25/15,Crystal Structure of sErbB3-Fab3379 Complex,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Lee, S., Schlessinger, J.",3.2,X-RAY DIFFRACTION,0.278,0.252,False,True,IGHV3,IGLV1,Lambda,,,,,,5cus_K_O_D,False
9mx1,B,C,0,A,protein,,toxin a,"TRANSFERASE,TOXIN/IMMUNE SYSTEM",07/09/25,Clostridioides difficile Toxin A with mCDIFA-248-25 Fab,Clostridioides difficile; Mus musculus,mus musculus,mus musculus,clostridioides difficile,"Huynh, K.W., Ammirati, M., Kroh, H.K., Lacy, D.B., Han, S.",3.2,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGKV6,Kappa,,,,,,9mx1_B_C_A,False
4hg4,X,Y,0,H,protein,,hemagglutinin ha2,VIRAL PROTEIN/IMMUNE SYSTEM,10/06/12,Crystal structure of Fab 2G1 in complex with a H2N2 influenza virus hemagglutinin,INFLUENZA A VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus,"Xu, R., Wilson, I.A.",3.2,X-RAY DIFFRACTION,0.302,0.249,False,True,IGHV1,IGKV1,Kappa,,,,,,4hg4_X_Y_H,False
6k68,C,D,0,E,protein,,protein a,STRUCTURAL PROTEIN,06/01/19,Application of anti-helix antibodies in protein structure determination (8420-3MNZ),HUMAN IMMUNODEFICIENCY VIRUS 1; STAPHYLOCOCCUS AUREUS,human immunodeficiency virus 1,human immunodeficiency virus 1,staphylococcus aureus,"Lee, J.O., Jin, M.S., Kim, J.W., Kim, S., Lee, H., Cho, G.Y.",3.2,X-RAY DIFFRACTION,0.318,0.289,False,True,IGHV9,IGKV8,Kappa,,,,,,6k68_C_D_E,False
7wue,C,D,0,A,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,02/08/22,Crystal structure of SARS-CoV-2 Receptor Binding Domain in complex with the monoclonal antibody m31A7,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; MUS MUSCULUS,mus musculus,mus musculus,severe acute respiratory syndrome coronavirus2 ,"Mohapatra, A.",3.2,X-RAY DIFFRACTION,0.295,0.228,False,True,IGHV1,IGKV8,Kappa,,,,,,7wue_C_D_A,False
8vpf,E,G,0,C,protein,,spike glycoprotein,VIRAL PROTEIN,03/19/25,Structure of SARS-CoV spike in complex with CoV1-65 Fab (NTD-bound),Homo sapiens; Severe acute respiratory syndrome coronavirus,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus,"Bangaru, S., Ward, A.B.",3.2,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV2,Lambda,,,,,,8vpf_E_G_C,False
8dwa,H,L,0,A,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,12/07/22,Crystal structure of neutralizing antibody P1D9 Fab in complex with SARS-CoV-2 spike receptor binding domain (RBD),Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Reddem, E.R., Shapiro, L.",3.2,X-RAY DIFFRACTION,0.297,0.235,False,True,IGHV1,IGKV1,Kappa,,,,,,8dwa_H_L_A,False
7czz,H,K,0,A,protein,,spike glycoprotein,VIRAL PROTEIN,09/09/20,S protein of SARS-CoV-2 in complex bound with P5A-2F11_3B,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Yan, R.H., Zhang, Y.Y., Li, Y.N., Zhou, Q.",3.2,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV4,Kappa,,,,,,7czz_H_K_A,False
6uig,H,L,0,G,protein,,hemagglutinin,ANTIVIRAL PROTEIN,09/30/19,Crystal structure of human monoclonal antibody H7.200 in complex with H7N9 hemagglutinin HA1,INFLUENZA A VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus,"Dong, J., Crowe, J.E.",3.2,X-RAY DIFFRACTION,0.234,0.207,False,True,IGHV4,IGKV1,Kappa,,,,,,6uig_H_L_G,False
4mxv,Y,X,0,D,protein,,lymphotoxin-alpha,CYTOKINE/IMMUNE SYSTEM,09/26/13,Structure of Lymphotoxin alpha bound to anti-LTa Fab,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Yin, J.P., Hymowitz, S.G.",3.2,X-RAY DIFFRACTION,0.235,0.177,False,True,IGHV3,IGKV1,Kappa,,,,,,4mxv_Y_X_D,False
7w71,H,L,0,A,protein,,regulator of sigma-e protease rsep,HYDROLASE/IMMUNE SYSTEM,09/07/22,Crystal structure of the PDZ-C domain of E. coli RseP in complex with 12C7 Fab,Escherichia coli; Mus musculus,mus musculus,mus musculus,escherichia coli,"Hirose, T., Katagiri, S., Nogi, T.",3.2,X-RAY DIFFRACTION,0.289,0.243,False,True,IGHV1,IGKV5,Kappa,,,,,,7w71_H_L_A,False
7sfw,O,P,0,E,protein,,spike glycoprotein e2,VIRUS/IMMUNE SYSTEM,10/04/21,CryoEM structure of Venezuelan Equine Encephalitis virus (VEEV) TC-83 strain VLP in complex with Fab hVEEV-63 (focus refine of the asymmetric unit),VENEZUELAN EQUINE ENCEPHALITIS VIRUS (STRAIN TC-83); HOMO SAPIENS,homo sapiens,homo sapiens,venezuelan equine encephalitis virus (straintc-83) ,"Binshtein, E., Crowe, J.E.",3.2,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV3,Lambda,,,,,,7sfw_O_P_E,False
6mpg,X,Y,0,D,protein,,envelope glycoprotein gp41,VIRAL PROTEIN,10/06/18,"Cryo-EM structure at 3.2 A resolution of HIV-1 fusion peptide-directed antibody, A12V163-b.01, elicited by vaccination of Rhesus macaques, in complex with stabilized HIV-1 Env BG505 DS-SOSIP, which was also bound to antibodies VRC03 and PGT122",MACACA MULATTA; HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,macaca mulatta,macaca mulatta,human immunodeficiency virus 1,"Acharya, P., Kwong, P.D.",3.2,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV4,Kappa,,,,,,6mpg_X_Y_D,False
7cwn,K,I,0,B,protein,,spike glycoprotein,VIRAL PROTEIN,08/29/20,P17-H014 Fab cocktail in complex with SARS-CoV-2 spike protein,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Wang, N., Wang, X.",3.2,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7cwn_K_I_B,False
7mxl,J,K,0,C,protein,,major pollen allergen bet v 1-a,ALLERGEN,05/19/21,Complex of Bet v 1 with the Fab fragments of a three antibody cocktail,HOMO SAPIENS; BETULA PENDULA,homo sapiens,homo sapiens,betula pendula,"Romero-Hernandez, A., Franklin, M.C.",3.2,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,7mxl_J_K_C,False
7tat,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,12/21/21,SARS-CoV-2 spike in complex with the S2K146 neutralizing antibody Fab fragment (two receptor-binding domains open),SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Park, Y.J., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler, D.",3.2,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV1,Lambda,,,,,,7tat_H_L_A,False
3vrl,H,L,0,C,protein,,gag protein,IMMUNE SYSTEM/VIRAL PROTEIN,04/12/12,Crystal structure of BMJ4 p24 capsid protein in complex with A10F9 Fab,HUMAN IMMUNODEFICIENCY VIRUS 1; MUS MUSCULUS,mus musculus,mus musculus,human immunodeficiency virus 1,"Gu, Y., Cao, F., Li, S., Yuan, Y.A., Xia, N.",3.2,X-RAY DIFFRACTION,0.292,0.211,False,False,IGHV5,IGKV12,Kappa,,,,,,3vrl_H_L_C,False
7kra,I,J,0,A,protein,,er membrane protein complex subunit 1,MEMBRANE PROTEIN/IMMUNE SYSTEM,11/19/20,Cryo-EM structure of Saccharomyces cerevisiae ER membrane protein complex bound to Fab-DH4 in lipid nanodiscs,HOMO SAPIENS; SACCHAROMYCES CEREVISIAE,homo sapiens,homo sapiens,saccharomyces cerevisiae,"Miller-Vedam, L.E., Schirle Oakdale, N.S., Braeuning, B., Boydston, E.A., Sevillano, N., Popova, K.D., Bonnar, J.L., Shurtleff, M.J., Prabu, J.R., Stroud, R.M., Craik, C.S., Schulman, B.A., Weissman, J.S., Frost, A.",3.2,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV2,Kappa,,,,,,7kra_I_J_A,False
9n5z,A,B,0,C,protein,,hemagglutinin,IMMUNE SYSTEM/VIRAL PROTEIN,11/12/25,Hemagglutinin CA09 homotrimer bound to AMB38310/AMB38599 Fab,Homo sapiens; Influenza A virus (A/California/01/2009(H1N1)),homo sapiens,homo sapiens,influenza a virus (a/california/01/2009(h1n1)),"Fernandez-Quintero, M.L., Raghavan, S.S.R., Gharpure, A., Turner, H.L., Ward, A.B.",3.2,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV3,Lambda,,,,,,9n5z_A_B_C,False
7f9w,B,C,0,A,protein,,interleukin-2 receptor subunit alpha,ANTITUMOR PROTEIN,07/05/21,CD25 in complex with Fab,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Liu, C.",3.2,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV4,Kappa,,,,,,7f9w_B_C_A,False
7t3d,O,Q,0,G,protein,,hemagglutinin ha2 chain,Viral Protein/IMMUNE SYSTEM,12/07/21,CryoEM map of anchor 222-1C06 Fab and lateral patch 2B05 Fab binding H1 HA,INFLUENZA A VIRUS (A/CALIFORNIA/04/2009(H1N1)); HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus (a/california/04/2009(h1n1)),"Han, J., Ward, A.B.",3.2,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV3,Kappa,,,,,,7t3d_O_Q_G,False
4hg4,L,M,0,B,protein,,hemagglutinin ha2,VIRAL PROTEIN/IMMUNE SYSTEM,10/06/12,Crystal structure of Fab 2G1 in complex with a H2N2 influenza virus hemagglutinin,INFLUENZA A VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus,"Xu, R., Wilson, I.A.",3.2,X-RAY DIFFRACTION,0.302,0.249,False,True,IGHV1,IGKV1,Kappa,,,,,,4hg4_L_M_B,False
6iec,H,L,0,A,protein,,nsmgngc,STRUCTURAL PROTEIN/IMMUNE SYSTEM,04/10/19,Structure of RVFV Gn and human monoclonal antibody R17,RIFT VALLEY FEVER VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,rift valley fever virus,"Wang, Q.H., Wu, Y., Gao, F., Qi, J.X., Gao, G.F.",3.2,X-RAY DIFFRACTION,0.281,0.241,False,True,IGHV3,IGLV3,Lambda,,,,,,6iec_H_L_A,False
9me6,H,L,0,A,protein,,type 1 fimbrin d-mannose specific adhesin,CELL ADHESION/IMMUNE SYSTEM,11/26/25,"Antibody fragments from mAb21, mAb475, and mAb824 bound to the adhesin protein FimH",Escherichia coli; Mus musculus,mus musculus,mus musculus,escherichia coli,"Hvorecny, K.L., Magala, P., Klevit, R.E., Kollman, J.M.",3.2,ELECTRON MICROSCOPY,,,False,False,IGHV1,IGKV6,Kappa,,,,,,9me6_H_L_A,False
7c4s,J,K,0,B,protein,,sphingosine 1-phosphate receptor 3,MEMBRANE PROTEIN,05/18/20,Sphingosine-1-phosphate receptor 3 with a natural ligand.,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Iwata, S., Maeda, S., Luo, F., Nango, E., hirata, K., Asada, H.",3.2,X-RAY DIFFRACTION,0.263,0.242,False,False,IGHV1,IGKV6,Kappa,,,,,,7c4s_J_K_B,False
6mpg,Q,R,0,C,protein,,envelope glycoprotein gp120,VIRAL PROTEIN,10/06/18,"Cryo-EM structure at 3.2 A resolution of HIV-1 fusion peptide-directed antibody, A12V163-b.01, elicited by vaccination of Rhesus macaques, in complex with stabilized HIV-1 Env BG505 DS-SOSIP, which was also bound to antibodies VRC03 and PGT122",MACACA MULATTA; HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Acharya, P., Kwong, P.D.",3.2,ELECTRON MICROSCOPY,,,False,True,unknown,IGKV3,Kappa,,,,,,6mpg_Q_R_C,False
2zjs,H,L,0,Y,protein,,preprotein translocase secy subunit,PROTEIN TRANSPORT/IMMUNE SYSTEM,03/08/08,Crystal Structure of SecYE translocon from Thermus thermophilus with a Fab fragment,THERMUS THERMOPHILUS; MUS MUSCULUS,mus musculus,mus musculus,thermus thermophilus,"Tsukazaki, T., Mori, H., Fukai, S., Ishitani, R., Perederina, A., Vassylyev, D.G., Ito, K., Nureki, O.",3.2,X-RAY DIFFRACTION,0.280,0.244,False,True,IGHV1,IGKV10,Kappa,,,,,,2zjs_H_L_Y,False
9og1,B,C,0,A,protein,,a28l,VIRAL PROTEIN,12/24/25,Globular domain of monkeypox virus OPG153 (A28) bound to antibody 02M12,Homo sapiens; Monkeypox virus,homo sapiens,homo sapiens,monkeypox virus,"Rundlet, E.J., Zhou, L., McLellan, J.S.",3.2,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,9og1_B_C_A,False
6t3f,H,L,0,F,protein,,fusion glycoprotein f0,VIRAL PROTEIN,10/10/19,Crystal structure Nipah virus fusion glycoprotein in complex with a neutralising Fab fragment,NIPAH VIRUS; ORYCTOLAGUS CUNICULUS,oryctolagus cuniculus,oryctolagus cuniculus,nipah virus,"Avanzato, V.A., Pryce, R., Walter, T.S., Bowden, T.A.",3.2,X-RAY DIFFRACTION,0.249,0.213,False,True,IGHV1,IGKV1,Kappa,,,,,,6t3f_H_L_F,False
4od2,B,A,0,S,protein,,tumor necrosis factor receptor superfamily member 10b,APOPTOSIS/IMMUNE SYSTEM,01/09/14,Crystal structure of the Fab fragment of an anti-DR5 antibody bound to DR5,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Hymowitz, S.G., Compaan, D.",3.2,X-RAY DIFFRACTION,0.305,0.241,False,True,IGHV3,IGLV3,Lambda,9.199999999999999e-10,-12.32759904720082,Saturation Analysis,,TBD,4od2_B_A_S,False
1orq,B,A,0,C,protein,,potassium channel,MEMBRANE PROTEIN,03/14/03,X-ray structure of a voltage-dependent potassium channel in complex with an Fab,AEROPYRUM PERNIX; MUS MUSCULUS,mus musculus,mus musculus,aeropyrum pernix,"Jiang, Y., Lee, A., Chen, J., Ruta, V., Cadene, M., Chait, B.T., MacKinnon, R.",3.2,X-RAY DIFFRACTION,0.298,0.253,False,False,IGHV3,IGKV4,Kappa,,,,,,1orq_B_A_C,False
7pqz,A,B,0,E,protein,,spike protein s1,VIRAL PROTEIN,09/20/21,Crystal structure of the receptor binding domain of SARS-CoV-2 Spike glycoprotein in complex with FI-3A and FD-11A Fabs,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, D., Ren, J., Stuart, D.I.",3.2,X-RAY DIFFRACTION,0.240,0.201,False,True,IGHV3,IGLV1,Lambda,,,,,,7pqz_A_B_E,False
3c09,H,L,0,D,protein,,epidermal growth factor receptor,IMMUNE SYSTEM/TRANSFERASE,01/18/08,Crystal structure the Fab fragment of matuzumab (Fab72000) in complex with domain III of the extracellular region of EGFR,"HOMO SAPIENS, MUS MUSCULUS; HOMO SAPIENS","homo sapiens, mus musculus","homo sapiens, mus musculus",homo sapiens,"Ferguson, K.M., Schmiedel, J., Knoechel, T.",3.2,X-RAY DIFFRACTION,0.299,0.242,False,True,IGHV1,IGKV1,Kappa,4.3e-08,-10.04,SPR,25.0,18394559,3c09_H_L_D,False
7mem,I,K,0,F,protein,,hemagglutinin ha1 chain,Viral protein/IMMUNE SYSTEM,04/06/21,CryoEM structure of monoclonal Fab 045-09 2B05 binding the lateral patch of influenza virus H1 HA,INFLUENZA A VIRUS (STRAIN SWL A/CALIFORNIA/04/2009 H1N1); HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus (strain swla/california/04/2009 h1n1) ,"Han, J., Ward, A.",3.2,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7mem_I_K_F,False
7l5j,Y,X,0,A,protein,,capsid protein,VIRAL PROTEIN/IMMUNE SYSTEM,12/22/20,Mouse Norovirus Protruding domain complexed with neutralizing Fab fragment from mAb A6.2,MURINE NOROVIRUS 1; MUS MUSCULUS,mus musculus,mus musculus,murine norovirus 1,"Smith, T.J., Sherman, M.B.",3.2,ELECTRON MICROSCOPY,,,False,False,IGHV4,IGKV4,Kappa,,,,,,7l5j_Y_X_A,False
7v61,H,K,0,B,protein,,angiotensin-converting enzyme 2,MEMBRANE PROTEIN,08/18/21,ACE2 -Targeting Monoclonal Antibody as Potent and Broad-Spectrum Coronavirus Blocker,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,severe acute respiratory syndrome coronavirus2 ,severe acute respiratory syndrome coronavirus2 ,homo sapiens,"Yan, R.H., Zhang, Y.Y., Li, Y.N., Zhou, Q.",3.2,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV5,Kappa,,,,,,7v61_H_K_B,False
7cgw,A,B,0,C,protein,,programmed cell death protein 1,ANTITUMOR PROTEIN,07/02/20,Complex structure of PD-1 and tislelizumab Fab,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Hong, Y., Feng, Y.C., Liu, Y.",3.2,X-RAY DIFFRACTION,0.254,0.218,False,True,IGHV4,IGKV4,Kappa,,,,,,7cgw_A_B_C,False
5ywy,H,L,0,A,protein,,"prostaglandin e2 receptor ep4 subtype,prostaglandin e2receptor ep4 subtype ",SIGNALING PROTEIN-IMMUNE SYSTEM,11/30/17,Crystal structure of the clinically important GPCR in complex with functional antibody.,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Toyoda, Y., Morimoto, K., Suno, R., Horita, S., Iwata, S., Kobayashi, T.",3.2,X-RAY DIFFRACTION,0.252,0.222,False,True,IGHV1,IGKV14,Kappa,5.900000000000001e-08,-9.862322414589237,Unknown,,TBD,5ywy_H_L_A,False
8hit,A,B,0,C,protein,,cytotoxic t-lymphocyte protein 4,IMMUNE SYSTEM,02/01/23,Crystal structure of anti-CTLA-4 humanized IgG1 MAb--JS007 in complex with human CTLA-4,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Tan, S., Shi, Y., Wang, Q., Gao, G.F., Guan, J., Chai, Y., Qi, J.",3.2,X-RAY DIFFRACTION,0.298,0.251,False,True,IGHV4,IGKV1,Kappa,,,,,,8hit_A_B_C,False
8q5d,E,F,0,D,protein,,pfrh5,CELL ADHESION,06/05/24,PfRH5 bound to monoclonal antibody MAD10-466,Homo sapiens; Plasmodium falciparum 3D7,homo sapiens,homo sapiens,plasmodium falciparum 3d7,"Farrell, B., Higgins, M.K.",3.2,X-RAY DIFFRACTION,0.317,0.272,False,True,IGHV1,IGKV1,Kappa,,,,,,8q5d_E_F_D,False
7k9h,I,M,0,C,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,09/29/20,"SARS-CoV-2 Spike in complex with neutralizing Fab 2B04 (one up, two down conformation)",SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; MUS MUSCULUS,mus musculus,mus musculus,severe acute respiratory syndrome coronavirus2 ,"Errico, J.M., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID)",3.2,ELECTRON MICROSCOPY,,,False,True,IGHV2,IGLV1,Lambda,,,,,,7k9h_I_M_C,False
8dz4,H,L,0,I,protein,,circumsporozoite protein,IMMUNE SYSTEM,08/02/23,Cryo-EM structure of 356 Fab in complex with recombinant shortened Plasmodium falciparum circumsporozoite protein (rsCSP),Homo sapiens; Plasmodium falciparum,homo sapiens,homo sapiens,plasmodium falciparum,"Martin, G.M., Ward, A.B.",3.2,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV3,Kappa,,,,,,8dz4_H_L_I,False
5xj3,A,B,0,C,protein,,cytotoxic t-lymphocyte protein 4,IMMUNE SYSTEM,04/25/18,Complex structure of ipilimumab-scFv and CTLA-4,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"He, M., Chai, Y., Qi, J., Tong, Z., Tan, S., Gao, G.F.",3.2,X-RAY DIFFRACTION,0.264,0.222,True,True,IGHV3,IGKV3,Kappa,,,,,,5xj3_A_B_C,False
8smm,H,L,0,A,protein,,hyaluronan synthase 1,Transferase/Immune System,05/01/24,Xenopus laevis hyaluronan synthase 1,Homo sapiens; Xenopus laevis,homo sapiens,homo sapiens,xenopus laevis,"Gorniak, I., Zimmer, J.",3.2,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8smm_H_L_A,False
8tqk,D,E,0,B,protein,,fusion glycoprotein f0,"VIRAL PROTEIN, IMMUNE SYSTEM",04/24/24,Human parainfluenza virus type 3 prefusion F trimer in complex with rPIV3-18 Fab,Homo sapiens; Human respirovirus 3,homo sapiens,homo sapiens,human respirovirus 3,"Otrelo-Cardoso, A.R., Jardetzky, T.S.",3.2,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8tqk_D_E_B,False
8iow,H,L,0,I,protein,,interleukin-6 receptor subunit alpha,IMMUNE SYSTEM,01/08/09,Cryo-EM structure of the sarilumab Fab/IL-6R complex,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"She, J., Chen, L., Wang, M.X.",3.2,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8iow_H_L_I,False
3c09,C,B,0,A,protein,,epidermal growth factor receptor,IMMUNE SYSTEM/TRANSFERASE,01/18/08,Crystal structure the Fab fragment of matuzumab (Fab72000) in complex with domain III of the extracellular region of EGFR,"HOMO SAPIENS, MUS MUSCULUS; HOMO SAPIENS","homo sapiens, mus musculus","homo sapiens, mus musculus",homo sapiens,"Ferguson, K.M., Schmiedel, J., Knoechel, T.",3.2,X-RAY DIFFRACTION,0.299,0.242,False,True,IGHV1,IGKV1,Kappa,4.3e-08,-10.04,SPR,25.0,18394559,3c09_C_B_A,False
8t49,P,R,0,F,protein,,md65 n332-gt5 sosip gp120,VIRAL PROTEIN/Immune System,01/08/09,MD65 N332-GT5 SOSIP in complex with RM_N332_03 Fab and RM20A3 Fab,Human immunodeficiency virus 1; Macaca mulatta,macaca mulatta,macaca mulatta,human immunodeficiency virus 1,"Ozorowski, G., Torres, J.L., Ward, A.B.",3.2,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGLV3,Lambda,,,,,,8t49_P_R_F,False
8uf7,B,A,0,C,protein,,prothrombin,BLOOD CLOTTING,02/14/24,"Cryo-EM structure of POmAb, a Type-I anti-prothrombin antiphospholipid antibody, bound to kringle-1 of human prothrombin",Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Kumar, S., Summers, B., Basore, K., Pozzi, N.",3.2,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGKV4,Kappa,,,,,,8uf7_B_A_C,False
8tma,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,01/17/24,Antibody N3-1 bound to RBD in the up conformation,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Hsieh, C.-L., McLellan, J.S.",3.2,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV1,Kappa,,,,,,8tma_H_L_A,False
3g6d,H,L,0,A,protein,,interleukin-13,IMMUNE SYSTEM,02/06/09,Crystal structure of the complex between CNTO607 Fab and IL-13,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Teplyakov, A., Obmolova, G., Gilliland, G.L.",3.2,X-RAY DIFFRACTION,0.263,0.213,False,True,IGHV3,IGLV3,Lambda,1.84e-11,-14.645408833701548,Unknown,,TBD,3g6d_H_L_A,True
8ulf,H,L,0,A,protein,,pv cell-traversal protein,CELL INVASION,09/11/24,Crystal structure of Plasmodium vivax CelTOS in complex with antibody 7g7,Mus musculus; Plasmodium vivax,mus musculus,mus musculus,plasmodium vivax,"Tang, W.K., Tolia, N.H.",3.2,X-RAY DIFFRACTION,0.295,0.275,False,True,IGHV1,IGKV4,Kappa,,,,,,8ulf_H_L_A,False
7xsb,H,L,0,E,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,05/10/23,Crystal structure of SARS-CoV-2 spike receptor binding domain bound with P5S-3B11 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Wang, X., Wang, Z., Gao, M.",3.2,X-RAY DIFFRACTION,0.324,0.258,False,True,IGHV3,IGLV6,Lambda,,,,,,7xsb_H_L_E,False
5xjm,H,L,0,A,protein,,"type-2 angiotensin ii receptor,soluble cytochrome b562,type-2 angiotensin ii receptor ",SIGNALING PROTEIN,05/02/17,Complex structure of angiotensin II type 2 receptor with Fab,HOMO SAPIENS; ESCHERICHIA COLI; MUS MUSCULUS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,"homo sapiens, escherichia coli","Asada, H., Horita, S., Shimamura, T., Iwata, S.",3.2,X-RAY DIFFRACTION,0.275,0.226,False,True,IGHV5,IGKV4,Kappa,4.3e-10,-12.77823529775025,Unknown,,TBD,5xjm_H_L_A,False
7txz,E,F,0,A,protein,,glycoprotein g,VIRAL PROTEIN,03/09/22,Nipah Virus attachment (G) glycoprotein ectodomain in complex with nAH1.3 neutralizing antibody Fab fragment (local refinement of the distal region),Mus sp.; Nipah henipavirus,mus sp.,mus sp.,nipah henipavirus,"Wang, Z.Q., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler, D.",3.2,ELECTRON MICROSCOPY,,,False,True,IGHV6,IGKV3,Kappa,,,,,,7txz_E_F_A,False
6ln2,C,B,0,A,protein,,"glucagon-like peptide 1 receptor,rubredoxin,glucagon-likepeptide 1 receptor ",MEMBRANE PROTEIN,12/28/19,Crystal structure of full length human GLP1 receptor in complex with Fab fragment (Fab7F38),HOMO SAPIENS; CLOSTRIDIUM PASTEURIANUM; MUS MUSCULUS,mus musculus,mus musculus,"homo sapiens, clostridium pasteurianum","Wu, F., Yang, L., Hang, K., Laursen, M., Wu, L., Han, G.W., Ren, Q., Roed, N.K., Lin, G., Hanson, M., Jiang, H., Wang, M., Reedtz-Runge, S., Song, G., Stevens, R.C.",3.2,X-RAY DIFFRACTION,0.262,0.213,False,True,IGHV1,IGKV4,Kappa,,,,,,6ln2_C_B_A,False
8gto,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,07/12/23,cryo-EM structure of Omicron BA.5 S protein in complex with XGv282,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Xia, X.Y., Zhang, Y.Y., Chi, X.M., Huang, B.D., Wu, L.S., Zhou, Q.",3.2,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV1,Lambda,,,,,,8gto_H_L_A,False
8c8t,C,D,0,A,protein,,envelope glycoprotein gp160,IMMUNE SYSTEM,01/08/09,cryo-EM structure of BG505 SOSIP.664 HIV-1 Env trimer in complex with bNAbs EPTC112 and 3BNC117,Homo sapiens; Human immunodeficiency virus 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Baquero, E., Molinos-Albert, L., Mouquet, H.",3.2,ELECTRON MICROSCOPY,,,False,True,unknown,IGLV2,Lambda,,,,,,8c8t_C_D_A,False
7ey0,H,L,0,R,protein,,spike glycoprotein,VIRAL PROTEIN,05/29/21,Local CryoEM structure of the SARS-CoV-2 S6PV2 in complex with BD-813 Fab and BD-744 Fab,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Du, S., Xiao, J.",3.2,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7ey0_H_L_R,False
7yvk,H,I,0,B,protein,,spike glycoprotein,VIRAL PROTEIN/ANTIVIRAL PROTEIN,06/28/23,Omicron BA.4/5 SARS-CoV-2 S in complex with TH272 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Guo, Y., Zhang, G., Liang, J., Liu, F., Rao, Z.",3.2,ELECTRON MICROSCOPY,,,False,True,IGHV2,IGLV2,Lambda,,,,,,7yvk_H_I_B,False
5cus,H,L,0,A,protein,,receptor tyrosine-protein kinase erbb-3,TRANSFERASE,07/25/15,Crystal Structure of sErbB3-Fab3379 Complex,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Lee, S., Schlessinger, J.",3.2,X-RAY DIFFRACTION,0.278,0.252,False,True,IGHV3,IGLV1,Lambda,,,,,,5cus_H_L_A,False
7cwn,H,N,0,C,protein,,spike glycoprotein,VIRAL PROTEIN,08/29/20,P17-H014 Fab cocktail in complex with SARS-CoV-2 spike protein,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Wang, N., Wang, X.",3.2,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV6,Kappa,,,,,,7cwn_H_N_C,False
3qum,H,L,0,P,protein,,prostate-specific antigen,IMMUNE SYSTEM,02/24/11,Crystal structure of human prostate specific antigen (PSA) in Fab sandwich with a high affinity and a PCa selective antibody,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Stura, E.A., Muller, B.H., Michel, S., Ducancel, F.",3.2,X-RAY DIFFRACTION,0.294,0.198,False,False,IGHV1,IGKV2,Kappa,,,,,,3qum_H_L_P,False
6weq,I,J,0,C,protein,,non-structural protein 1,VIRAL PROTEIN,04/02/20,DENV1 NS1 in complex with neutralizing 2B7 Fab fragment,DENGUE VIRUS 1; MUS MUSCULUS,mus musculus,mus musculus,dengue virus 1,"Akey, D.L., Smith, J.L.",3.2,X-RAY DIFFRACTION,0.261,0.207,False,False,IGHV1,IGKV3,Kappa,,,,,,6weq_I_J_C,False
7a69,C,B,0,A,protein,,multidrug resistance protein 1,TRANSPORT PROTEIN,08/25/20,Nanodisc reconstituted human ABCB1 in complex with MRK16 Fab and vincristine,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Nosol, K., Locher, K.P.",3.2,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGKV1,Kappa,,,,,,7a69_C_B_A,False
7mxl,H,L,0,C,protein,,major pollen allergen bet v 1-a,ALLERGEN,05/19/21,Complex of Bet v 1 with the Fab fragments of a three antibody cocktail,HOMO SAPIENS; BETULA PENDULA,homo sapiens,homo sapiens,betula pendula,"Romero-Hernandez, A., Franklin, M.C.",3.2,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV3,Kappa,,,,,,7mxl_H_L_C,False
7prz,H,L,0,E,protein,,surface glycoprotein,VIRAL PROTEIN,09/22/21,Crystal structure of the receptor binding domain of SARS-CoV-2 beta variant spike glycoprotein in complex with beta-22 Fabs,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, D., Ren, J., Stuart, D.I.",3.2,X-RAY DIFFRACTION,0.223,0.190,False,True,IGHV3,IGKV4,Kappa,,,,,,7prz_H_L_E,False
6w4s,H,L,0,F,protein,,solute carrier family 40 member 1,TRANSPORT PROTEIN/IMMUNE SYSTEM,03/11/20,Structure of apo human ferroportin in lipid nanodisc,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Billesboelle, C.B., Azumaya, C.M., Gonen, S., Powers, A., Kretsch, R.C., Schneider, S., Arvedson, T., Dror, R.O., Cheng, Y., Manglik, A.",3.2,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV3,Kappa,,,,,,6w4s_H_L_F,False
5cus,I,M,0,B,protein,,receptor tyrosine-protein kinase erbb-3,TRANSFERASE,07/25/15,Crystal Structure of sErbB3-Fab3379 Complex,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Lee, S., Schlessinger, J.",3.2,X-RAY DIFFRACTION,0.278,0.252,False,True,IGHV3,IGLV1,Lambda,,,,,,5cus_I_M_B,False
6p8n,H,L,0,C,protein,,env outer domain eod-gt8,IMMUNE SYSTEM,06/07/19,Crystal Structure of Antibody P-p1f1 in Complex with eOD-GT8,HUMAN IMMUNODEFICIENCY VIRUS 1; MUS MUSCULUS,mus musculus,mus musculus,human immunodeficiency virus 1,"Weidle, C., Pancera, M.",3.202,X-RAY DIFFRACTION,0.287,0.226,False,True,IGHV1,IGKV8,Kappa,,,,,,6p8n_H_L_C,False
5w6d,H,L,0,G,protein,,bg505-sosip.v4.1-gt1-n137a gp120,VIRAL PROTEIN/Immune System,06/16/17,Crystal structure of BG505-SOSIP.v4.1-GT1-N137A in complex with Fabs 35022 and 9H/109L,HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Garces, F., Stanfield, R.L., Wilson, I.A.",3.202,X-RAY DIFFRACTION,0.267,0.242,False,True,IGHV4,unknown,unknown,,,,,,5w6d_H_L_G,False
8ivw,B,C,0,A,protein,,neuropilin-2,MEMBRANE PROTEIN,01/08/09,Crystal structure of NRP2 in complex with aNRP2-10 Fab fragment,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Geng, Y., Zhai, L.",3.205,X-RAY DIFFRACTION,0.294,0.248,False,True,IGHV1,IGKV1,Kappa,,,,,,8ivw_B_C_A,False
5grj,H,L,0,A,protein,,programmed cell death 1 ligand 1,IMMUNE SYSTEM,08/11/16,Crystal structure of human PD-L1 with monoclonal antibody avelumab,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Liu, K., Tan, S., Chai, Y., Chen, D., Song, H., Zhang, C.W.-H., Shi, Y., Liu, J., Tan, W., Lyu, J., Gao, S., Yan, J., Qi, J., Gao, G.F.",3.206,X-RAY DIFFRACTION,0.238,0.204,False,True,IGHV3,IGLV2,Lambda,4.21e-11,-14.15501182414434,SPR,,TBD,5grj_H_L_A,False
5t33,H,L,0,G,protein,,rhpa gp120 core,IMMUNE SYSTEM,08/24/16,"Crystal structure of strain-specific glycan-dependent CD4 binding site-directed neutralizing antibody CAP257-RH1, in complex with HIV-1 strain RHPA gp120 core with an oligomannose N276 glycan.",HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS,homo sapiens,homo sapiens,human immunodeficiency virus,"Wibmer, C.K., Gorman, J., Kwong, P.D.",3.2092,X-RAY DIFFRACTION,0.269,0.229,False,True,IGHV3,IGLV3,Lambda,,,,,,5t33_H_L_G,False
7luc,N,O,0,C,protein,,fusion glycoprotein f0,IMMUNE SYSTEM/VIRAL PROTEIN,02/22/21,Cryo-EM structure of RSV preF bound by Fabs 32.4K and 01.4B,RESPIRATORY SYNCYTIAL VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,respiratory syncytial virus,"Wrapp, D., McLellan, J.S.",3.21,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGKV1,Kappa,,,,,,7luc_N_O_C,False
7luc,H,I,0,B,protein,,fusion glycoprotein f0,IMMUNE SYSTEM/VIRAL PROTEIN,02/22/21,Cryo-EM structure of RSV preF bound by Fabs 32.4K and 01.4B,RESPIRATORY SYNCYTIAL VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,respiratory syncytial virus,"Wrapp, D., McLellan, J.S.",3.21,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV2,Kappa,,,,,,7luc_H_I_B,False
5d1x,B,A,0,E,protein,,iron-regulated surface determinant protein b,IMMUNE SYSTEM,08/04/15,IsdB NEAT2 bound by D4-30,HOMO SAPIENS; STAPHYLOCOCCUS AUREUS (STRAIN USA300),homo sapiens,homo sapiens,staphylococcus aureus (strain usa300),"Deng, X.",3.21,X-RAY DIFFRACTION,0.310,0.269,False,True,unknown,IGKV2,Kappa,2.1e-11,-14.567099215178107,SPR,,TBD,5d1x_B_A_E,False
8u1s,J,K,0,D,protein,,neuraminidase,HYDROLASE,03/27/24,A mechanistic understanding of protective influenza B neuraminidase mAbs at the airway interface,Homo sapiens; Influenza B virus (B/Iowa/06/2017),homo sapiens,homo sapiens,influenza b virus (b/iowa/06/2017),"Ferguson, J.A., Raghavan, S.S.R., Ward, A.B.",3.21,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV1,Kappa,,,,,,8u1s_J_K_D,False
5d1x,C,D,0,E,protein,,iron-regulated surface determinant protein b,IMMUNE SYSTEM,08/04/15,IsdB NEAT2 bound by D4-30,HOMO SAPIENS; STAPHYLOCOCCUS AUREUS (STRAIN USA300),homo sapiens,homo sapiens,staphylococcus aureus (strain usa300),"Deng, X.",3.21,X-RAY DIFFRACTION,0.310,0.269,False,True,IGHV3,IGKV3,Kappa,2.1e-11,-14.567099215178107,SPR,,TBD,5d1x_C_D_E,False
4s1r,H,L,0,G,protein,,clade a/e 93th057 hiv-1 gp120 core,VIRAL PROTEIN/IMMUNE SYSTEM/INHIBITOR,01/14/15,"Crystal structure of a VRC01-lineage antibody, 45-VRC01.H08.F-117225, in complex with clade A/E HIV-1 gp120 core",HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Kwon, Y.D., Yang, Y., Zhang, B., Kwong, P.D.",3.214,X-RAY DIFFRACTION,0.286,0.261,False,True,unknown,IGKV3,Kappa,,,,,,4s1r_H_L_G,False
9mqd,H,L,0,A,protein,,hemagglutinin ha1 chain,VIRAL PROTEIN,08/13/25,Cryo-EM structure of hemagglutinin H5N1 in complex with Fab 310-12D03,Homo sapiens; Influenza A virus,homo sapiens,homo sapiens,influenza a virus,"Malla, T.N., Tsybovsky, Y., Zhou, T.",3.22,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV3,Kappa,,,,,,9mqd_H_L_A,False
5d1q,B,A,0,E,protein,,iron-regulated surface determinant protein b,IMMUNE SYSTEM,08/04/15,IsdB NEAT2 bound by clone D2-06,HOMO SAPIENS; STAPHYLOCOCCUS AUREUS (STRAIN BOVINE RF122 / ET3-1),homo sapiens,homo sapiens,staphylococcus aureus (strain bovine rf122 /et3-1) ,"Deng, X.",3.22,X-RAY DIFFRACTION,0.288,0.239,False,True,IGHV1,IGKV1,Kappa,1.3e-11,-14.851238438600603,SPR,,TBD,5d1q_B_A_E,False
9mqa,I,M,0,C,protein,,hemagglutinin ha1 chain,VIRAL PROTEIN,08/13/25,Cryo-EM structure of hemagglutinin H5N1 in complex with Fab 310-7D11,Homo sapiens; Influenza A virus,homo sapiens,homo sapiens,influenza a virus,"Malla, T.N., Tsybovsky, Y., Zhou, T.",3.22,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV2,Kappa,,,,,,9mqa_I_M_C,False
3tt3,H,L,0,A,protein,,leucine transporter leut,TRANSPORT PROTEIN,09/13/11,Crystal Structure of LeuT in the inward-open conformation in complex with Fab,AQUIFEX AEOLICUS; MUS MUSCULUS,mus musculus,mus musculus,aquifex aeolicus,"Krishnamurthy, H., Gouaux, E.",3.22,X-RAY DIFFRACTION,0.300,0.257,False,True,IGHV1,IGKV3,Kappa,,,,,,3tt3_H_L_A,False
4k8r,D,C,0,B,protein,,proprotein convertase subtilisin/kexin type 9,IMMUNE SYSTEM,04/18/13,An Antibody Against the C-terminal Domain of PCSK9 lowers LDL Cholesterol Levels in vivo,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Schiele, F., Nar, H.",3.22,X-RAY DIFFRACTION,0.226,0.167,False,True,IGHV3,IGKV1,Kappa,,,,,,4k8r_D_C_B,False
5d1q,C,D,0,E,protein,,iron-regulated surface determinant protein b,IMMUNE SYSTEM,08/04/15,IsdB NEAT2 bound by clone D2-06,HOMO SAPIENS; STAPHYLOCOCCUS AUREUS (STRAIN BOVINE RF122 / ET3-1),homo sapiens,homo sapiens,staphylococcus aureus (strain bovine rf122 /et3-1) ,"Deng, X.",3.22,X-RAY DIFFRACTION,0.288,0.239,False,True,IGHV3,IGKV3,Kappa,1.3e-11,-14.851238438600603,SPR,,TBD,5d1q_C_D_E,False
7mw6,H,L,0,C,protein,,spike glycoprotein,VIRAL PROTEIN/Immune System,05/15/21,Structure of the SARS-CoV-2 Spike trimer with three RBDs up in complex with the Fab fragment of human neutralizing antibody clone 2,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Hu, Y., Xiong, Y.",3.22,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,7mw6_H_L_C,False
6nn3,H,L,0,A,protein,,vp2 of b19 parvovirus,VIRUS LIKE PARTICLE,01/14/19,Structure of parvovirus B19 decorated with Fab molecules from a human antibody,HUMAN PARVOVIRUS B19; HOMO SAPIENS,homo sapiens,homo sapiens,human parvovirus b19,"Rossmann, M.G., Sun, Y., Klose, T., Liu, Y.",3.22,ELECTRON MICROSCOPY,,,False,False,IGHV4,IGLV3,Lambda,,,,,,6nn3_H_L_A,False
8ejj,H,L,0,c,protein,,unknown,VIRAL PROTEIN/IMMUNE SYSTEM,06/07/23,Lassa virus glycoprotein complex (Josiah) bound to S370.7 Fab,Homo sapiens; Lassa mammarenavirus,homo sapiens,homo sapiens,lassa mammarenavirus,"Perrett, H.R., Ward, A.B.",3.22,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGLV3,Lambda,,,,,,8ejj_H_L_c,False
9mi3,B,D,0,A,protein,,spike glycoprotein,VIRAL PROTEIN,08/20/25,Cryo-EM structure of SARS-CoV-2 spike protein in complex with neutralizing human antibody WRAIR-2008,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Jensen, J.L., Thomas, P.V., Joyce, M.G.",3.23,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV2,Kappa,,,,,,9mi3_B_D_A,False
7y1b,H,L,0,A,protein,,isoform 2 of basigin,TRANSPORT PROTEIN,06/14/23,3.2 angstrom cryo-EM structure of extracellular region of mouse Basigin-2 in complex with the Fab fragment of antibody 6E7F1,Mus musculus,mus musculus,mus musculus,mus musculus,"Zhang, H., Yang, X., Xue, Y., Huang, Y., Mo, X., Zhang, H., Li, N., Gao, N., Li, X., Wang, S., Gao, Y., Liao, J.",3.23,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV5,Kappa,,,,,,7y1b_H_L_A,False
7tpg,H,L,0,B,protein,,putative cell surface polysaccharide polymerase/ligase,MEMBRANE PROTEIN,01/25/22,Single-Particle Cryo-EM Structure of the WaaL O-antigen ligase in its ligand bound state,CUPRIAVIDUS METALLIDURANS; HOMO SAPIENS,homo sapiens,homo sapiens,cupriavidus metallidurans,"Ashraf, K.U., Nygaard, R., Vickery, O.N., Erramilli, S.K., Herrera, C.M., McConville, T.H., Petrou, V.I., Giacometti, S.I., Dufrisne, M.B., Nosol, K., Zinkle, A.P., Graham, C.L.B., Loukeris, M., Kloss, B., Skorupinska-Tudek, K., Swiezewska, E., Roper, D., Clarke, O.B., Uhlemann, A.C., Kossiakoff, A.A., Trent, M.S., Stansfeld, P.J., Mancia, F.",3.23,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7tpg_H_L_B,False
5umi,A,B,0,C,protein,,toxin a,TOXIN/IMMUNE SYSTEM,01/27/17,Clostridium difficile TcdA-CROPs bound to PA50 Fab,CLOSTRIDIOIDES DIFFICILE; HOMO SAPIENS,homo sapiens,homo sapiens,clostridioides difficile,"Kroh, H.K., Chandrasekaran, R., Rosenthal, K., Woods, R., Jin, X., Ohi, M.D., Nyborg, A.C., Rainey, G.J., Warrener, P., Spiller, B.W., Lacy, D.B.",3.23,X-RAY DIFFRACTION,0.290,0.270,False,True,IGHV1,IGKV3,Kappa,,,,,,5umi_A_B_C,False
8zym,H,D,0,A,protein,,"fusion glycoprotein f0,expression tag",VIRAL PROTEIN/IMMUNE SYSTEM,04/30/25,Complex structure of 60 Fab bound to DS2 prefusion F trimer,Mus musculus; Respiratory syncytial virus A2; synthetic construct,mus musculus,mus musculus,"respiratory syncytial virus a2, syntheticconstruct ","Wang, X., Ge, J., Guo, F.",3.23,ELECTRON MICROSCOPY,,,False,True,IGHV2,IGKV8,Kappa,,,,,,8zym_H_D_A,False
5umi,H,L,0,C,protein,,toxin a,TOXIN/IMMUNE SYSTEM,01/27/17,Clostridium difficile TcdA-CROPs bound to PA50 Fab,CLOSTRIDIOIDES DIFFICILE; HOMO SAPIENS,homo sapiens,homo sapiens,clostridioides difficile,"Kroh, H.K., Chandrasekaran, R., Rosenthal, K., Woods, R., Jin, X., Ohi, M.D., Nyborg, A.C., Rainey, G.J., Warrener, P., Spiller, B.W., Lacy, D.B.",3.23,X-RAY DIFFRACTION,0.290,0.270,False,True,IGHV1,IGKV3,Kappa,,,,,,5umi_H_L_C,False
6h5n,F,E,0,D,protein,,gametocyte surface protein p45/48,CELL INVASION,07/25/18,Plasmodium falciparum Pfs48/45 C-terminal domain bound to monoclonal antibody 85RF45.1,PLASMODIUM FALCIPARUM; RATTUS NORVEGICUS,rattus norvegicus,rattus norvegicus,plasmodium falciparum,"Lennartz, F., Higgins, M.K.",3.23,X-RAY DIFFRACTION,0.282,0.261,False,True,IGHV5,IGLV3,Lambda,,,,,,6h5n_F_E_D,False
4oqt,H,L,0,A,protein,,leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 ,MEMBRANE PROTEIN/IMMUNE SYSTEM,02/10/14,LINGO-1/Li81 Fab complex,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Pepinsky, R.B., Arndt, J.W., Quan, C., Gao, Y., Quintero-Monzon, O., Lee, X., Mi, S.",3.23,X-RAY DIFFRACTION,0.256,0.192,False,True,IGHV3,IGKV3,Kappa,,,,,,4oqt_H_L_A,False
8qkr,B,C,0,A,protein,,reticulocyte-binding protein-like protein 5,IMMUNE SYSTEM,07/31/24,Plasmodium falciparum reticulocyte-binding protein homologue 5 (PfRH5) bound to R5.251,Homo sapiens; Plasmodium falciparum,homo sapiens,homo sapiens,plasmodium falciparum,"Wright, N.D., Barrett, J.R., Bradshaw, W.J., Paterson, N.G., MacLean, E.M., Ferreira, L., McHugh, K., Koekemoer, L., Draper, S.J.",3.234,X-RAY DIFFRACTION,0.327,0.254,False,True,IGHV1,IGKV1,Kappa,,,,,,8qkr_B_C_A,False
7k90,O,P,0,C,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,09/27/20,"Structure of the SARS-CoV-2 S 6P trimer in complex with the human neutralizing antibody Fab fragment, C144",SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Barnes, C.O., Esswein, S.R., Bjorkman, P.J.",3.24,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV2,Lambda,,,,,,7k90_O_P_C,False
7rai,J,N,0,E,protein,,envelope glycoprotein gp160,IMMUNE SYSTEM,07/01/21,Cryo-EM structure of M4008_N1 Fab in complex with BG505 DS-SOSIP.664 Env trimer,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Chan, K.-W., Kong, X.P.",3.24,ELECTRON MICROSCOPY,,,False,True,unknown,unknown,unknown,,,,,,7rai_J_N_E,False
7rfc,H,L,0,D,protein,,envelope glycoprotein e2,VIRAL PROTEIN/IMMUNE SYSTEM,07/14/21,Crystal structure of broadly neutralizing antibody mAb1382 in complex with Hepatitis C virus envelope glycoprotein E2 ectodomain,HOMO SAPIENS; HEPACIVIRUS C,homo sapiens,homo sapiens,hepacivirus c,"Flyak, A.I., Bjorkman, P.J.",3.24,X-RAY DIFFRACTION,0.284,0.233,False,True,IGHV1,IGKV3,Kappa,,,,,,7rfc_H_L_D,False
9dn2,J,N,0,C,protein,,hemagglutinin,VIRAL PROTEIN/Immune System,07/30/25,TJ5-1 Fab in complex with NG2 COBRA hemagglutinin,Homo sapiens; Influenza A virus,homo sapiens,homo sapiens,influenza a virus,"Nagashima, K., Mousa, J.",3.24,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV1,Lambda,,,,,,9dn2_J_N_C,False
7n5h,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,06/05/21,Cryo-EM structure of broadly neutralizing antibody 2-36 in complex with prefusion SARS-CoV-2 spike glycoprotein,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Casner, R.G., Cerutti, G., Shapiro, L.",3.24,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV3,Kappa,,,,,,7n5h_H_L_A,False
6cse,H,L,0,M,protein,,sodium/alanine symporter agcs,MEMBRANE PROTEIN,03/20/18,Crystal structure of sodium/alanine symporter AgcS with L-alanine bound,METHANOCOCCUS MARIPALUDIS (STRAIN S2 / LL); MUS MUSCULUS,mus musculus,mus musculus,methanococcus maripaludis (strain s2 / ll),"Ma, J., Reyes, F.E., Gonen, T.",3.24,X-RAY DIFFRACTION,0.251,0.230,False,False,IGHV6,IGKV12,Kappa,,,,,,6cse_H_L_M,False
9jy2,B,A,0,e,protein,,unknown,IMMUNE SYSTEM,11/26/25,Fab-CD3-delta epsilon-TCR complex,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Wang, L., Li, J., Li, Z.",3.24,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV10,Kappa,,,,,,9jy2_B_A_e,False
7ycz,F,G,0,A,protein,,spike glycoprotein,VIRAL PROTEIN,12/13/23,SARS-CoV-2 Omicron 2-RBD up Spike trimer complexed with three XG005 molecules,Homo sapiens; Severe acute respiratory syndrome coronavirus,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus,"Zhan, W.Q., Zhang, X., Chen, Z.G., Sun, L.",3.24,ELECTRON MICROSCOPY,,,False,False,IGHV2,IGLV2,Lambda,,,,,,7ycz_F_G_A,False
8tqi,C,D,0,A,protein,,hemagglutinin-neuraminidase,VIRAL PROTEIN/IMMUNE SYSTEM,04/24/24,Hemagglutinin-neuraminidase from Human parainfluenza virus type 3: complex with rPIV3-23 and rPIV3-28 Fabs,Homo sapiens; Human respirovirus 3,homo sapiens,homo sapiens,human respirovirus 3,"Otrelo-Cardoso, A.R., Jardetzky, T.S.",3.24,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8tqi_C_D_A,False
8tqi,I,J,0,A,protein,,hemagglutinin-neuraminidase,VIRAL PROTEIN/IMMUNE SYSTEM,04/24/24,Hemagglutinin-neuraminidase from Human parainfluenza virus type 3: complex with rPIV3-23 and rPIV3-28 Fabs,Homo sapiens; Human respirovirus 3,homo sapiens,homo sapiens,human respirovirus 3,"Otrelo-Cardoso, A.R., Jardetzky, T.S.",3.24,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV3,Kappa,,,,,,8tqi_I_J_A,False
7zfe,M,N,0,C,protein,,spike protein s1,VIRAL PROTEIN,04/01/22,SARS-CoV-2 Omicron RBD in complex with Omi-32 Fab and nanobody C1,LAMA GLAMA; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, D., Huo, J., Ren, J., Stuart, D.I.",3.25,X-RAY DIFFRACTION,0.293,0.237,False,True,IGHV3,IGKV3,Kappa,,,,,,7zfe_M_N_C,False
7fjn,H,L,0,B,protein,,"spike glycoprotein,envelope glycoprotein",VIRAL PROTEIN/IMMUNE SYSTEM,08/04/21,Cryo-EM structure of South African (B.1.351) SARS-CoV-2 spike glycoprotein in complex with two T6 Fab,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,"severe acute respiratory syndrome coronavirus2, human immunodeficiency virus 1 ","Wang, X., Zhang, L., Zhang, S., Liang, Q.",3.25,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV8,Kappa,,,,,,7fjn_H_L_B,False
2vir,B,A,0,C,protein,,hemagglutinin,COMPLEX (HEMAGGLUTININ/IMMUNOGLOBULIN),12/22/97,INFLUENZA VIRUS HEMAGGLUTININ COMPLEXED WITH A NEUTRALIZING ANTIBODY,INFLUENZA A VIRUS (A/X-31(H3N2)); MUS MUSCULUS,mus musculus,mus musculus,influenza a virus (a/x-31(h3n2)),"Bizebard, T., Fleury, D., Gigant, B., Wharton, S.A., Skehel, J.J., Knossow, M.",3.25,X-RAY DIFFRACTION,0.249,0.198,False,False,IGHV2,IGLV1,Lambda,1e-09,-12.27,Other,25.0,9461077,2vir_B_A_C,True
6bkd,H,L,0,E,protein,,polyprotein,IMMUNE SYSTEM,11/08/17,Structure of Hepatitis C Virus Envelope Glycoprotein E2 core from genotype 6a bound to broadly neutralizing antibody AR3D,RECOMBINANT HEPATITIS C VIRUS HK6A/JFH-1; HOMO SAPIENS,homo sapiens,homo sapiens,recombinant hepatitis c virus hk6a/jfh-1,"Tzarum, N., Wilson, I.A., Law, M.",3.25,X-RAY DIFFRACTION,0.286,0.268,False,True,IGHV1,IGKV3,Kappa,1.13e-07,-9.477296673074427,BLI,,TBD,6bkd_H_L_E,False
6xey,J,K,0,C,protein,,sars-cov-2 spike glycoprotein,VIRAL PROTEIN/Immune System,06/14/20,Cryo-EM structure of the SARS-CoV-2 spike glycoprotein bound to Fab 2-4,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Rapp, M., Shapiro, L., Ho, D.D.",3.25,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV2,Lambda,,,,,,6xey_J_K_C,False
8thz,H,L,0,A,protein,,envelope glycoprotein e2,ANTIVIRAL PROTEIN,07/24/24,CryoEM structure of neutralizing antibodies CBH-7 and HC84.26 in complex with Hepatitis C virus envelope glycoprotein E2,Hepacivirus C; Homo sapiens,homo sapiens,homo sapiens,hepacivirus c,"Shahid, S., Jiang, L., Liu, Y., Hasan, S.S., Mariuzza, R.A.",3.25,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,8thz_H_L_A,False
3tyg,H,L,0,A,protein,,envelope glycoprotein gp160,"IMMUNE SYSTEM, VIRAL PROTEIN",09/25/11,Crystal structure of broad and potent HIV-1 neutralizing antibody PGT128 in complex with a glycosylated engineered gp120 outer domain with miniV3 (eODmV3),HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Pejchal, R., Huang, P.S., Schief, W.R., Stanfield, R.L., Wilson, I.A.",3.25,X-RAY DIFFRACTION,0.257,0.207,False,True,IGHV4,IGLV2,Lambda,,,,,,3tyg_H_L_A,False
3rhw,F,N,0,B,protein,,avermectin-sensitive glutamate-gated chloride channel gluclalpha ,transport protein/immune system,04/12/11,C. elegans glutamate-gated chloride channel (GluCl) in complex with Fab and ivermectin,CAENORHABDITIS ELEGANS; MUS MUSCULUS,mus musculus,mus musculus,caenorhabditis elegans,"Hibbs, R.E., Gouaux, E.",3.26,X-RAY DIFFRACTION,0.270,0.239,False,True,IGHV1,IGLV1,Lambda,,,,,,3rhw_F_N_B,False
3rhw,I,O,0,D,protein,,avermectin-sensitive glutamate-gated chloride channel gluclalpha ,transport protein/immune system,04/12/11,C. elegans glutamate-gated chloride channel (GluCl) in complex with Fab and ivermectin,CAENORHABDITIS ELEGANS; MUS MUSCULUS,mus musculus,mus musculus,caenorhabditis elegans,"Hibbs, R.E., Gouaux, E.",3.26,X-RAY DIFFRACTION,0.270,0.239,False,True,IGHV1,IGLV1,Lambda,,,,,,3rhw_I_O_D,False
9kkj,H,L,0,A,protein,,nectin-4,IMMUNE SYSTEM,11/19/25,Structure of Nectin-4 D1 domain in complex with the Fab fragment of 9MW2821 mAb,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Wen, H.Y.",3.26,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV4,Kappa,,,,,,9kkj_H_L_A,False
4jdt,H,L,0,G,protein,,gp120,viral protein/immune system,02/25/13,Crystal structure of chimeric germ-line precursor of NIH45-46 Fab in complex with gp120 of 93TH057 HIV-1,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Scharf, L., Diskin, R., Bjorkman, P.J.",3.26,X-RAY DIFFRACTION,0.267,0.227,False,True,IGHV1,IGKV3,Kappa,,,,,,4jdt_H_L_G,False
3rhw,G,K,0,C,protein,,avermectin-sensitive glutamate-gated chloride channel gluclalpha ,transport protein/immune system,04/12/11,C. elegans glutamate-gated chloride channel (GluCl) in complex with Fab and ivermectin,CAENORHABDITIS ELEGANS; MUS MUSCULUS,mus musculus,mus musculus,caenorhabditis elegans,"Hibbs, R.E., Gouaux, E.",3.26,X-RAY DIFFRACTION,0.270,0.239,False,True,IGHV1,IGLV1,Lambda,,,,,,3rhw_G_K_C,False
8yro,E,F,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,01/08/09,SARS-CoV-2 Delta Spike in complex with JL-8C,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Nguyen, V.H.T., Chen, X.",3.27,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGLV1,Lambda,,,,,,8yro_E_F_A,False
6q23,E,F,0,C,protein,,neuraminidase,"VIRAL PROTEIN,HYDROLASE/IMMUNE SYSTEM",08/06/19,Crystal structure of human 1G01 Fab in complex with influenza virus neuraminidase from A/California/04/2009 (H1N1),INFLUENZA A VIRUS (A/CALIFORNIA/04/2009 (H1N1); HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus (a/california/04/2009 (h1n1),"Zhu, X., Wilson, I.A.",3.27,X-RAY DIFFRACTION,0.241,0.196,False,True,IGHV3,IGKV1,Kappa,,,,,,6q23_E_F_C,False
8rgz,F,G,0,C,protein,,envelope glycoprotein b,VIRAL PROTEIN,06/19/24,Trimeric HSV-1F gB ectodomain in postfusion conformation with three bound HDIT101 Fab molecules.,Homo sapiens; Human alphaherpesvirus 1 strain F,homo sapiens,homo sapiens,human alphaherpesvirus 1 strain f,"Kalbermatter, D., Seyfizadeh, N., Imhof, T., Ries, M., Mueller, C., Jenner, L., Blumenschein, E., Yendrzheyevskiy, A., Moog, K., Eckert, D., Engel, R., Diebolder, P., Chami, M., Krauss, J., Schaller, T., Arndt, M.",3.27,ELECTRON MICROSCOPY,,,False,True,IGHV2,IGKV1,Kappa,,,,,,8rgz_F_G_C,False
9h6u,H,L,0,A,protein,,"spike glycoprotein,fibritin",PROTEIN BINDING,07/23/25,SARS-CoV-2 S protein in complex with pT1679 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2; Tequatrovirus T4,homo sapiens,homo sapiens,"severe acute respiratory syndrome coronavirus2, tequatrovirus t4 ","Hansen, G., Benecke, T., Vollmer, B., Gruenewald, K., Krey, T.",3.27,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV1,Lambda,,,,,,9h6u_H_L_A,False
9cq4,H,L,0,E,protein,,t-cell surface glycoprotein cd3 epsilon chain,MEMBRANE PROTEIN/IMMUNE SYSTEM,01/15/25,G115 gamma delta TCR/CD3 complex bound by OKT3 Fab,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Hoque, M., Saotome, K., Franklin, M.C.",3.27,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV4,Kappa,,,,,,9cq4_H_L_E,False
8dwx,V,U,0,M,protein,,e2 glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,05/31/23,Chikungunya VLP in complex with neutralizing Fab 506.C01 (asymmetric unit),Chikungunya virus strain Senegal 37997; Homo sapiens,homo sapiens,homo sapiens,chikungunya virus strain senegal 37997,"Adams, L.J., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID)",3.27,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV1,Kappa,,,,,,8dwx_V_U_M,False
4ybq,F,E,0,A,protein,,"solute carrier family 2, facilitated glucose transportermember 5 ",TRANSPORT PROTEIN/IMMUNE SYSTEM,02/19/15,Rat GLUT5 with Fv in the outward-open form,MUS MUSCULUS; RATTUS NORVEGICUS,mus musculus,mus musculus,rattus norvegicus,"Nomura, N., Shimamura, T., Iwata, S.",3.27,X-RAY DIFFRACTION,0.288,0.242,False,True,IGHV5,IGKV1,Kappa,,,,,,4ybq_F_E_A,False
5gs0,F,E,0,B,protein,,toll-like receptor 3,IMMUNE SYSTEM,08/13/16,Crystal structure of the complex of TLR3 and bi-specific diabody,MUS MUSCULUS; HOMO SAPIENS,mus musculus,mus musculus,homo sapiens,"Kim, J.H., Song, D.H., Youn, S.J., Kim, J.W., Cho, G., Lee, H., Lee, J.O.",3.275,X-RAY DIFFRACTION,0.248,0.192,False,True,IGHV6,IGLV3,Lambda,,,,,,5gs0_F_E_B,False
7lg6,O,Q,0,E,protein,,envelope glycoprotein gp120,VIRAL PROTEIN/IMMUNE SYSTEM,01/19/21,BG505 SOSIP.v5.2 in complex with VRC40.01 and RM19R Fabs,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS; MACACA MULATTA,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Cottrell, C.A., Torres, J.L., Wu, N.R., Ward, A.B.",3.28,ELECTRON MICROSCOPY,,,False,True,unknown,unknown,unknown,,,,,,7lg6_O_Q_E,False
6okp,Q,R,0,F,protein,,envelope glycoprotein gp120,VIRAL PROTEIN/IMMUNE SYSTEM,04/14/19,B41 SOSIP.664 in complex with the silent-face antibody SF12 and V3-targeting antibody 10-1074,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Barnes, C.O., Bjorkman, P.J.",3.28,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV3,Kappa,,,,,,6okp_Q_R_F,False
4r2g,J,I,0,K,protein,,surface protein gp160,IMMUNE SYSTEM,08/11/14,Crystal Structure of PGT124 Fab bound to HIV-1 JRCSF gp120 core and to CD4,HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 (JRCSF ISOLATE); HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus type 1 (jrcsfisolate) ,"Garces, F., Wilson, I.A.",3.283,X-RAY DIFFRACTION,0.263,0.207,False,True,IGHV4,IGLV3,Lambda,3.4e-08,-10.188885744060974,ITC,,TBD,4r2g_J_I_K,False
5cjo,H,L,0,A,protein,,insulin,HYDROLASE/HYDROLASE INHIBITOR,07/14/15,Crystal Structure Analysis of Elbow-Engineered-Fab-Bound Human Insulin Degrading Enzyme (IDE) in Complex with Insulin,MUS MUSCULUS; HOMO SAPIENS; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"liang, w.g., bailey, L., tang, w.j.",3.287,X-RAY DIFFRACTION,0.245,0.196,False,True,IGHV3,IGKV1,Kappa,,,,,,5cjo_H_L_A,False
7s07,H,L,0,A,protein,,envelope glycoprotein h,IMMUNE SYSTEM/VIRAL PROTEIN,11/09/22,Crystal structure of Epstein-Barr virus glycoprotein gH/gL/gp42-peptide in complex with human neutralizing antibodies 769B10 and 769C2,Homo sapiens; Human gammaherpesvirus 4,homo sapiens,homo sapiens,human gammaherpesvirus 4,"Chen, W.-H., Kanekiyo, M., Cohen, J.I., Joyce, M.G.",3.29,X-RAY DIFFRACTION,0.291,0.243,False,True,IGHV3,IGKV1,Kappa,,,,,,7s07_H_L_A,False
8cma,H,L,0,E,protein,,spike protein s1,VIRAL PROTEIN,02/28/24,SARS-CoV-2 Delta-RBD complexed with BA.4/5-35 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, D., Ren, J., Stuart, D.I.",3.29,X-RAY DIFFRACTION,0.268,0.231,False,True,IGHV3,IGKV3,Kappa,,,,,,8cma_H_L_E,False
9nrc,H,L,0,A,protein,,transmembrane protease serine 6,MEMBRANE PROTEIN,07/09/25,TMPRSS6 in complex with REGN7999 Fab and REGN8023 Fab,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Saotome, K., Franklin, M.C.",3.29,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,9nrc_H_L_A,False
7uvq,C,B,0,A,protein,,gametocyte surface protein p230,CELL INVASION/IMMUNE SYSTEM,02/15/23,Pfs230 domain 1 bound by RUPA-97 and 15C5 Fabs,Homo sapiens; Plasmodium falciparum,homo sapiens,homo sapiens,plasmodium falciparum,"Ivanochko, D., Julien, J.P.",3.29,X-RAY DIFFRACTION,0.264,0.215,False,True,IGHV3,IGKV4,Kappa,,,,,,7uvq_C_B_A,False
7uvq,D,E,0,A,protein,,gametocyte surface protein p230,CELL INVASION/IMMUNE SYSTEM,02/15/23,Pfs230 domain 1 bound by RUPA-97 and 15C5 Fabs,Homo sapiens; Plasmodium falciparum,homo sapiens,homo sapiens,plasmodium falciparum,"Ivanochko, D., Julien, J.P.",3.29,X-RAY DIFFRACTION,0.264,0.215,False,True,IGHV3,IGKV3,Kappa,,,,,,7uvq_D_E_A,False
9nrc,C,B,0,A,protein,,transmembrane protease serine 6,MEMBRANE PROTEIN,07/09/25,TMPRSS6 in complex with REGN7999 Fab and REGN8023 Fab,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Saotome, K., Franklin, M.C.",3.29,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV2,Kappa,,,,,,9nrc_C_B_A,False
5zs0,B,A,0,C,protein,,"envelope glycoprotein b,envelope glycoprotein b",VIRAL PROTEIN,04/26/18,Structure of glycoprotein B Domain IV of pseudorabies virus with 7B11 antibody,SUID ALPHAHERPESVIRUS 1; MUS MUSCULUS,mus musculus,mus musculus,suid alphaherpesvirus 1,"Hu, X.L., Yang, F.L.",3.29,X-RAY DIFFRACTION,0.310,0.241,False,False,IGHV5,IGKV6,Kappa,,,,,,5zs0_B_A_C,False
8tfh,H,L,0,B,protein,,ricin b chain,TOXIN/IMMUNE SYSTEM,04/17/24,Ricin in complex with Fab JB4,Mus musculus; Ricinus communis,mus musculus,mus musculus,ricinus communis,"Rudolph, M.J., Mantis, N.",3.29,X-RAY DIFFRACTION,0.334,0.274,False,True,IGHV1,IGKV19,Kappa,,,,,,8tfh_H_L_B,False
8sm1,H,L,0,G,protein,,envelope glycoprotein gp350,VIRAL PROTEIN/IMMUNE SYSTEM,05/01/24,CRYSTAL STRUCTURE OF HUMAN ANTIBODY 769A9 IN COMPLEX WITH EPSTEIN-BARR VIRUS MAJOR GLYCOPROTEIN GP350,Homo sapiens; Human herpesvirus 4,homo sapiens,homo sapiens,human herpesvirus 4,"Chen, W.-H., Bu, W., Cohen, J.I., Kanekiyo, M., Joyce, M.G.",3.29,X-RAY DIFFRACTION,0.298,0.258,False,True,IGHV1,IGKV3,Kappa,,,,,,8sm1_H_L_G,False
4gxu,S,T,0,G,protein,,hemagglutinin ha1 chain,VIRAL PROTEIN/IMMUNE SYSTEM,09/04/12,Crystal structure of antibody 1F1 bound to the 1918 influenza hemagglutinin,HOMO SAPIENS; INFLUENZA A VIRUS,homo sapiens,homo sapiens,influenza a virus,"Ekiert, D.C., Wilson, I.A.",3.294,X-RAY DIFFRACTION,0.255,0.219,False,True,IGHV3,IGLV1,Lambda,6.24e-09,,SPR,,23236279,4gxu_S_T_G,True
4gxu,Q,R,0,E,protein,,hemagglutinin ha1 chain,VIRAL PROTEIN/IMMUNE SYSTEM,09/04/12,Crystal structure of antibody 1F1 bound to the 1918 influenza hemagglutinin,HOMO SAPIENS; INFLUENZA A VIRUS,homo sapiens,homo sapiens,influenza a virus,"Ekiert, D.C., Wilson, I.A.",3.294,X-RAY DIFFRACTION,0.255,0.219,False,True,IGHV3,IGLV1,Lambda,6.24e-09,,SPR,,23236279,4gxu_Q_R_E,True
3v7a,F,G,0,B,protein,,capsid,IMMUNE SYSTEM,12/20/11,Structural basis for broad detection of genogroup II noroviruses by a monoclonal antibody that binds to a site occluded in the viral particle,HUMAN CALICIVIRUS; MUS MUSCULUS,mus musculus,mus musculus,human calicivirus,"Hansman, G.S., Mclellan, J.S., Kwong, P.D.",3.297,X-RAY DIFFRACTION,0.283,0.227,False,False,IGHV1,IGKV12,Kappa,,,,,,3v7a_F_G_B,False
7xic,K,L,0,B,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,04/12/22,S-ECD (Omicron) in complex with STS165,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Li, Y.N., Shen, Y.P., Zhang, Y.Y., Yan, R.H.",3.3,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV3,Kappa,,,,,,7xic_K_L_B,False
8sir,H,L,0,A,protein,,spike protein s1,IMMUNE SYSTEM,03/13/24,Crystal structure of SARS-CoV-2 spike receptor-binding domain in complex with broadly neutralizing antibody CC25.54 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Liu, H., Wilson, I.A.",3.3,X-RAY DIFFRACTION,0.236,0.208,False,True,IGHV4,IGKV1,Kappa,,,,,,8sir_H_L_A,False
7k4n,C,D,0,B,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,09/15/20,SARS-CoV-2 spike in complex with the S2E12 neutralizing antibody Fab fragment,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Tortorici, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)",3.3,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,7k4n_C_D_B,False
8vfv,H,L,0,A,protein,,envelope glycoprotein gp120,VIRAL PROTEIN/IMMUNE SYSTEM,01/08/09,HIV Env BG505_MD39_B16 SOSIP boosting trimer in complex with B16_d77.5 mouse Fab and RM20A3 Fab,Human immunodeficiency virus 1; Macaca mulatta; Mus musculus,mus musculus,mus musculus,human immunodeficiency virus 1,"Ozorowski, G., Torres, J.L., Ward, A.B.",3.3,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV3,Kappa,,,,,,8vfv_H_L_A,False
6u0l,P,Q,0,C,protein,,envelope glycoprotein gp160,VIRAL PROTEIN,08/14/19,Asymmetrically open conformational state (Class I) of HIV-1 Env trimer BG505 SOSIP.664 in complex with sCD4 and E51 Fab,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Yang, Z., Bjorkman, P.J.",3.3,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV1,Lambda,,,,,,6u0l_P_Q_C,False
8j1q,B,A,0,C,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM/DNA,06/21/23,CryoEM structure of SARS CoV-2 RBD and Aptamer complex,Homo sapiens; Severe acute respiratory syndrome coronavirus 2; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Rahman, M.S., Jang, S.K., Lee, J.O.",3.3,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV2,Lambda,,,,,,8j1q_B_A_C,False
8sml,F,E,0,D,protein,,protein-arginine deiminase type-4,HYDROLASE/IMMUNE SYSTEM,03/06/24,hPAD4 bound to inhibitory Fab hI365,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Maker, A., Verba, K.A.",3.3,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8sml_F_E_D,False
8der,W,V,0,C,protein,,spike glycoprotein e2,VIRAL PROTEIN,06/28/23,Cryo-EM local refinement of antibody SKV16 in complex with VEEV alphavirus spike glycoprotein,Macaca; Venezuelan equine encephalitis virus,macaca,macaca,venezuelan equine encephalitis virus,"Casner, R.G., Verardi, R., Roederer, M., Shapiro, L.",3.3,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV3,Lambda,,,,,,8der_W_V_C,False
8xe9,A,B,0,C,protein,,spike protein s2',VIRAL PROTEIN/IMMUNE SYSTEM,03/06/24,XBB.1.5 RBD in complex with BD55-1205,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Feng, L.L.",3.3,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV3,Kappa,,,,,,8xe9_A_B_C,False
7czv,I,M,0,B,protein,,spike glycoprotein,VIRAL PROTEIN,09/09/20,S protein of SARS-CoV-2 in complex bound with P5A-1B6_3B,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Yan, R.H., Zhang, Y.Y., Li, Y.N., Zhou, Q.",3.3,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7czv_I_M_B,False
7wec,I,K,0,C,protein,,spike glycoprotein,IMMUNE SYSTEM/VIRAL PROTEIN,12/23/21,SARS-CoV-2 Omicron variant spike protein with three XGv347 Fabs binding to three closed state RBDs,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Wang, X., Wang, L.",3.3,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,7wec_I_K_C,False
8df1,O,P,0,C,protein,,chitinase-3-like protein 1,IMMUNE SYSTEM,03/01/23,Chi3l1 bound by antibody C59,Homo sapiens; Oryctolagus cuniculus,oryctolagus cuniculus,oryctolagus cuniculus,homo sapiens,"Wrapp, D., McLellan, J.S.",3.3,X-RAY DIFFRACTION,0.243,0.206,False,True,IGHV1,IGKV1,Kappa,,,,,,8df1_O_P_C,False
2zuq,F,E,0,D,protein,,disulfide bond formation protein b,Oxidoreductase/IMMUNE SYSTEM,10/28/08,Crystal structure of DsbB-Fab complex,ESCHERICHIA COLI; MUS MUSCULUS,mus musculus,mus musculus,escherichia coli,"Inaba, K., Suzuki, M., Murakami, S.",3.3,X-RAY DIFFRACTION,0.351,0.275,False,False,IGHV5,IGKV8,Kappa,,,,,,2zuq_F_E_D,False
7m6e,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/ANTIVIRAL PROTEIN,03/25/21,"Structure of the SARS-CoV-2 S 6P trimer in complex with the human neutralizing antibody Fab fragment, BG10-19",SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Barnes, C.O., Bjorkman, P.J.",3.3,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGLV1,Lambda,,,,,,7m6e_H_L_A,False
8esv,H,L,0,A,protein,,disintegrin and metalloproteinase domain-containing protein10 ,MEMBRANE PROTEIN,06/14/23,Structure of human ADAM10-Tspan15 complex bound to 11G2 vFab,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Lipper, C.H., Blacklow, S.C.",3.3,ELECTRON MICROSCOPY,,,False,True,IGHV2,IGKV4,Kappa,,,,,,8esv_H_L_A,False
7m42,D,C,0,E,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,03/19/21,Complex of SARS-CoV-2 receptor binding domain with the Fab fragments of neutralizing antibodies REGN10985 and REGN10989,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, Y., Romero Hernandez, A., Saotome, K., Franklin, M.C.",3.3,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV1,Lambda,,,,,,7m42_D_C_E,False
3p30,H,L,0,A,protein,,hiv-1 gp41,IMMUNE SYSTEM,10/04/10,crystal structure of the cluster II Fab 1281 in complex with HIV-1 gp41 ectodomain,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Frey, G., Chen, J., Rits-Volloch, S., Freeman, M.M., Zolla-Pazner, S., Chen, B.",3.3,X-RAY DIFFRACTION,0.289,0.261,False,True,IGHV1,IGLV1,Lambda,,,,,,3p30_H_L_A,False
9uv4,J,N,0,B,protein,,mhv 68 glycoprotein b,VIRAL PROTEIN/IMMUNE SYSTEM,01/21/26,Structure of MHV68 glycoprotein B in complex with Fab5,Murid herpesvirus 68; Mus musculus,mus musculus,mus musculus,murid herpesvirus 68,"Cheng, B.Z., Xie, C., Sun, C., Zeng, M.S., Liu, Z., Fang, X.Y.",3.3,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV4,Kappa,,,,,,9uv4_J_N_B,False
7ezv,M,N,0,A,protein,,spike glycoprotein,VIRAL PROTEIN,06/02/21,local CryoEM structure of the SARS-CoV-2 S6PV2 in complex with BD-812 Fab and BD-836 Fab,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Liu, P.L.",3.3,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,7ezv_M_N_A,False
4r0l,H,L,0,D,protein,,t-cell costimulatory molecule cd28,IMMUNE SYSTEM,07/31/14,"Anti-canine CD28 antibody, 1C6, bound canine CD28",CANIS LUPUS FAMILIARIS; MUS MUSCULUS,mus musculus,canis lupus familiaris,mus musculus,"Gewe, M.M., Strong, R.K.",3.3,X-RAY DIFFRACTION,0.293,0.256,False,True,IGHV9,IGKV2,Kappa,,,,,,4r0l_H_L_D,False
7yvo,O,N,0,C,protein,,spike glycoprotein,VIRAL PROTEIN/ANTIVIRAL PROTEIN,06/28/23,Omicron BA.4/5 SARS-CoV-2 S in complex with TH027/132 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Guo, Y., Zhang, G., Liang, J., Liu, F., Rao, Z.",3.3,ELECTRON MICROSCOPY,,,False,True,IGHV2,IGLV1,Lambda,,,,,,7yvo_O_N_C,False
7mdu,H,L,0,A,protein,,surface protein gp120,VIRAL PROTEIN,04/06/21,BG505 SOSIP MD39 in complex with the monoclonal antibodies Rh.33104 mAb.1 and RM20A3,MACACA MULATTA; HUMAN IMMUNODEFICIENCY VIRUS 1,macaca mulatta,macaca mulatta,human immunodeficiency virus 1,"Antanasijevic, A., Ward, A.B.",3.3,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV1,Kappa,,,,,,7mdu_H_L_A,False
7ezv,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN,06/02/21,local CryoEM structure of the SARS-CoV-2 S6PV2 in complex with BD-812 Fab and BD-836 Fab,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Liu, P.L.",3.3,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGKV1,Kappa,,,,,,7ezv_H_L_A,False
7wd0,a,b,0,A,protein,,heavy chain of s5d2 fab,VIRAL PROTEIN,12/20/21,SARS-CoV-2 Beta spike in complex with two S5D2 Fabs,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; MUS MUSCULUS,mus musculus,mus musculus,severe acute respiratory syndrome coronavirus2 ,"Wang, Y.F., Cong, Y.",3.3,ELECTRON MICROSCOPY,,,False,False,IGHV1,IGKV8,Kappa,,,,,,7wd0_a_b_A,False
6oe4,B,C,0,A,protein,,fusion glycoprotein f0,Viral protein/immune system,03/27/19,Prefusion RSV F monomer bound by neutralizing antibody CR9501,HUMAN RESPIRATORY SYNCYTIAL VIRUS A (STRAIN A2); HOMO SAPIENS,homo sapiens,homo sapiens,human respiratory syncytial virus a (straina2) ,"McLellan, J.S., Gilman, M.S.A.",3.3,X-RAY DIFFRACTION,0.259,0.212,False,True,IGHV4,IGKV1,Kappa,,,,,,6oe4_B_C_A,False
8dyt,S,T,0,J,peptide,,circumsporozoite protein,IMMUNE SYSTEM,08/02/23,Cryo-EM structure of 227 Fab in complex with (NPNA)8 peptide,Homo sapiens; Plasmodium falciparum 3D7,homo sapiens,homo sapiens,plasmodium falciparum 3d7,"Martin, G.M., Ward, A.B.",3.3,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV1,Lambda,,,,,,8dyt_S_T_J,False
7fci,H,L,0,A,protein,,sodium/bile acid cotransporter,TRANSPORT PROTEIN/IMMUNE SYSTEM,07/14/21,human NTCP in complex with YN69083 Fab,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Park, J.H., Iwamoto, M., Yun, J.H., Uchikubo-Kamo, T., Son, D., Jin, Z., Yoshida, H., Ohki, M., Ishimoto, N., Mizutani, K., Oshima, M., Muramatsu, M., Wakita, T., Shirouzu, M., Liu, K., Uemura, T., Nomura, N., Iwata, S., Watashi, K., Tame, J.R.H., Nishizawa, T., Lee, W., Park, S.Y.",3.3,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV4,Kappa,,,,,,7fci_H_L_A,False
2qad,D,C,0,A,protein,,envelope glycoprotein gp160,viral protein/immune system,06/14/07,Structure of tyrosine-sulfated 412d antibody complexed with HIV-1 YU2 gp120 and CD4,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Huang, C.-C., Tang, M., Robinson, J., Wyatt, R., Kwong, P.D.",3.3,X-RAY DIFFRACTION,0.269,0.202,False,True,IGHV1,IGKV1,Kappa,,,,,,2qad_D_C_A,False
1z3g,H,L,0,A,protein,,ookinete surface protein pvs25,IMMUNE SYSTEM/CELL ADHESION,03/12/05,Crystal structure of complex between Pvs25 and Fab fragment of malaria transmission blocking antibody 2A8,MUS MUSCULUS; PLASMODIUM VIVAX SAI-1,mus musculus,mus musculus,plasmodium vivax sai-1,"Saxena, A.K., Singh, K., Su, H.P., Klein, M.M., Stowers, A.W., Saul, A.J., Long, C.A., Garboczi, D.N.",3.3,X-RAY DIFFRACTION,0.327,0.272,False,True,IGHV1,IGKV4,Kappa,,,,,,1z3g_H_L_A,False
7jr7,E,F,0,B,protein,,atp-binding cassette sub-family g member 8,TRANSLOCASE/IMMUNE SYSTEM,08/11/20,Cryo-EM structure of ABCG5/G8 in complex with Fab 2E10 and 11F4,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Huang, C.S., Yu, X., Min, X., Wang, Z., Zhang, H.",3.3,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV13,Kappa,,,,,,7jr7_E_F_B,False
7yh7,V,U,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,07/19/23,SARS-CoV-2 spike in complex with neutralizing antibody NIV-8 (state 2),Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Moriyama, S., Anraku, Y., Muranishi, S., Adachi, Y., Kuroda, D., Higuchi, Y., Kotaki, R., Tonouchi, K., Yumoto, K., Suzuki, T., Kita, S., Fukuhara, H., Kuroda, Y., Yamamoto, T., Onodera, T., Fukushi, S., Maeda, K., Nakamura-Uchiyama, F., Hashiguchi, T., Hoshino, A., Maenaka, K., Takahashi, Y.",3.3,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV1,Lambda,,,,,,7yh7_V_U_A,False
7f3q,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,06/16/21,SARS-CoV-2 RBD in complex with A5-10 Fab and A34-2 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Dou, Y., Wang, X., Liu, P., Lu, B., Wang, K.",3.3,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV3,Lambda,,,,,,7f3q_H_L_A,False
7yvo,I,H,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/ANTIVIRAL PROTEIN,06/28/23,Omicron BA.4/5 SARS-CoV-2 S in complex with TH027/132 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Guo, Y., Zhang, G., Liang, J., Liu, F., Rao, Z.",3.3,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV3,Kappa,,,,,,7yvo_I_H_A,False
7m42,B,A,0,E,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,03/19/21,Complex of SARS-CoV-2 receptor binding domain with the Fab fragments of neutralizing antibodies REGN10985 and REGN10989,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, Y., Romero Hernandez, A., Saotome, K., Franklin, M.C.",3.3,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV2,Lambda,,,,,,7m42_B_A_E,False
6wjl,F,J,0,E,protein,,glypican-2,Oncoprotein/Immune System,04/21/21,Crystal structure of Glypican-2 core protein in complex with D3 Fab,Homo sapiens; Lama glama,homo sapiens,homo sapiens,homo sapiens,"Raman, S., Maris, J.M., Bosse, K.R., Julien, J.P.",3.3,X-RAY DIFFRACTION,0.317,0.278,False,True,IGHV3,IGKV1,Kappa,,,,,,6wjl_F_J_E,False
7la4,H,L,0,A,protein,,integrin alpha-iib,CELL ADHESION,01/05/21,Integrin AlphaIIbBeta3-PT25-2 Complex,MUS MUSCULUS; HOMO SAPIENS,mus musculus,mus musculus,homo sapiens,"Bush, M.W., Walz, T., Coller, B., Filizola, M., Spasic, A., Nesic, D., Li, J.",3.3,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV10,Kappa,,,,,,7la4_H_L_A,False
9hkq,D,E,0,C,protein,,beta-2-microglobulin,PROTEIN BINDING,12/17/25,Structure of VHH5 targeting NY-ESO-1(SLLMWITQC)/HLA-A*02:01,Homo sapiens; Mus musculus; synthetic construct; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Jie, B., Shenghai, C., Liqiang, P., Xing, Z.",3.3,ELECTRON MICROSCOPY,,,False,True,IGHV8,IGKV4,Kappa,,,,,,9hkq_D_E_C,False
6ko5,H,L,0,A,protein,,chimera of soluble cytochrome b562 and growth hormonesecretagogue receptor type 1 ,MEMBRANE PROTEIN,08/08/19,Complex structure of Ghrelin receptor with Fab,ESCHERICHIA COLI; HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,"escherichia coli, homo sapiens","Shiimura, Y., Horita, S., Asada, H., Hirata, K., Iwata, S., Kojima, M.",3.3,X-RAY DIFFRACTION,0.258,0.211,False,False,IGHV1,IGKV8,Kappa,,,,,,6ko5_H_L_A,False
7srs,H,L,0,C,protein,,isoform 1b of beta-arrestin-1,MEMBRANE PROTEIN,09/21/22,5-HT2B receptor bound to LSD in complex with beta-arrestin1 obtained by cryo-electron microscopy (cryoEM),Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Barros-Alvarez, X., Cao, C., Panova, O., Roth, B.L., Skiniotis, G.",3.3,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7srs_H_L_C,False
7srs,Q,P,0,R,protein,,5-hydroxytryptamine receptor 2b,MEMBRANE PROTEIN,09/21/22,5-HT2B receptor bound to LSD in complex with beta-arrestin1 obtained by cryo-electron microscopy (cryoEM),Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Barros-Alvarez, X., Cao, C., Panova, O., Roth, B.L., Skiniotis, G.",3.3,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV4,Kappa,,,,,,7srs_Q_P_R,False
8u1p,B,C,0,A,protein,,gametocyte surface protein p45/48,CELL INVASION/Immune System,03/12/25,Local refinement of Plasmodium falciparum gametocyte surface protein Pfs48/45 Domains 1 and 2 in complex with neutralizing antibodies,Homo sapiens; Plasmodium falciparum 3D7,homo sapiens,homo sapiens,plasmodium falciparum 3d7,"Kucharska, I., Hailemariam, S., Ivanochko, D., Rubinstein, J., Julien, J.P.",3.3,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,8u1p_B_C_A,False
8u1p,H,L,0,A,protein,,gametocyte surface protein p45/48,CELL INVASION/Immune System,03/12/25,Local refinement of Plasmodium falciparum gametocyte surface protein Pfs48/45 Domains 1 and 2 in complex with neutralizing antibodies,Homo sapiens; Plasmodium falciparum 3D7,homo sapiens,homo sapiens,plasmodium falciparum 3d7,"Kucharska, I., Hailemariam, S., Ivanochko, D., Rubinstein, J., Julien, J.P.",3.3,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV3,Lambda,,,,,,8u1p_H_L_A,False
6b0e,B,A,0,E,protein,,25 kda ookinete surface antigen,IMMUNE SYSTEM,09/14/17,Crystal structure of Pfs25 in complex with the transmission blocking antibody 1260,HOMO SAPIENS; PLASMODIUM FALCIPARUM,homo sapiens,homo sapiens,plasmodium falciparum,"Scally, S.W., McLeod, B., Bosch, A., King, C.R., Julien, J.P.",3.3,X-RAY DIFFRACTION,0.280,0.230,False,True,IGHV1,IGKV2,Kappa,4.1e-08,-10.077965960666114,BLI,,TBD,6b0e_B_A_E,False
8ulr,J,N,0,A,protein,,envelope glycoprotein gp160,Viral Protein/Immune System,04/16/25,Cryo-EM structure of the BG505 SOSIPv2 in complex with bNAb 05_B08 Fabs,Homo sapiens; Human immunodeficiency virus 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"DeLaitsch, A.T., Bjorkman, P.J.",3.3,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,8ulr_J_N_A,False
8hpj,E,F,0,D,protein,,oxalate,TRANSPORT PROTEIN/IMMUNE SYSTEM,02/15/23,Crystal structure of the bacterial oxalate transporter OxlT in a ligand-free outward-facing form,Mus musculus; Oxalobacter formigenes,mus musculus,mus musculus,oxalobacter formigenes,"Shimamura, T., Hirai, T., Yamashita, A.",3.3,X-RAY DIFFRACTION,0.286,0.260,False,True,IGHV5,IGKV6,Kappa,,,,,,8hpj_E_F_D,False
4zxb,C,D,0,E,protein,,insulin receptor,HORMONE RECEPTOR/IMMUNE SYSTEM,05/20/15,"Structure of the human insulin receptor ectodomain, IRDeltabeta construct, in complex with four Fab molecules",MUS MUSCULUS; HOMO SAPIENS,mus musculus,mus musculus,homo sapiens,"Croll, T., Smith, B.J., Margetts, M.B., Whittaker, J., Weiss, M.A., Ward, C.W., Lawrence, M.C.",3.3,X-RAY DIFFRACTION,0.237,0.205,False,True,IGHV1,IGKV9,Kappa,,,,,,4zxb_C_D_E,False
7uhz,H,L,0,A,protein,,envelope glycoprotein b,VIRAL PROTEIN,01/08/09,Post-fusion ectodomain of HSV-1 gB in complex with BMPC-23 Fab,Human alphaherpesvirus 1 strain KOS; Mus musculus,mus musculus,mus musculus,human alphaherpesvirus 1 strain kos,"Windsor, I.W., Kong, S.L., Garforth, S.J., Almo, S.C., Harrison, S.C.",3.3,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,7uhz_H_L_A,False
9axl,H,L,0,B,protein,,integrin beta-3,BLOOD CLOTTING/IMMUNE SYSTEM,11/13/24,Structure of the semi-extended AlphaIIbBeta3 in complex with R21D10 Fab,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Wang, J.L., Walz, T., Coller, B., Wang, L., Li, J.H.",3.3,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV4,Kappa,,,,,,9axl_H_L_B,False
9fkd,H,L,0,B,protein,,de novo designed dbpro1156_2 binder,DE NOVO PROTEIN,10/30/24,Progesterone-bound DB3 Fab in complex with computationally designed DBPro1156_2 protein binder,synthetic construct,synthetic construct,synthetic construct,synthetic construct,"Pacesa, M., Marchand, A., Correia, B.E.",3.3,ELECTRON MICROSCOPY,,,False,True,IGHV9,IGKV1,Kappa,,,,,,9fkd_H_L_B,False
7e23,B,C,0,A,protein,,spike protein s1,VIRAL PROTEIN,02/04/21,SARS-CoV-2 spike in complex with the CA521 neutralizing antibody Fab (focused refinement on Fab-RBD),SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Liu, C., Song, D., Dou, C.",3.3,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV3,Kappa,,,,,,7e23_B_C_A,False
9ml4,P,Q,0,C,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,06/04/25,Structure of the SARS-CoV-2 Spike 6P in complex with the rabbit M8b-A10 Fab,Oryctolagus cuniculus; Severe acute respiratory syndrome coronavirus 2,oryctolagus cuniculus,oryctolagus cuniculus,severe acute respiratory syndrome coronavirus2 ,"Fan, C., Bjorkman, P.J.",3.3,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,9ml4_P_Q_C,False
7q9g,E,F,0,B,protein,,surface glycoprotein,Viral Protein/Immune System,11/12/21,COVOX-222 fab in complex with SARS-CoV-2 beta-Spike glycoprotein,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Duyvesteyn, H.M.E., Ren, J., Stuart, D.I.",3.3,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV3,Kappa,,,,,,7q9g_E_F_B,False
6ukj,H,L,0,A,protein,,chloroquine resistance transporter,MEMBRANE PROTEIN,10/05/19,Single-Particle Cryo-EM Structure of Plasmodium falciparum Chloroquine Resistance Transporter (PfCRT) 7G8 Isoform,PLASMODIUM FALCIPARUM (ISOLATE 7G8); HOMO SAPIENS,homo sapiens,homo sapiens,plasmodium falciparum (isolate 7g8),"Kim, J., Tan, Y.Z., Wicht, K.J., Erramilli, S.K., Dhingra, S.K., Okombo, J., Vendome, J., Hagenah, L.M., Giacometti, S.I., Warren, A.L., Nosol, K., Roepe, P.D., Potter, C.S., Carragher, B., Kossiakoff, A.A., Quick, M., Fidock, D.A., Mancia, F.",3.3,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,6ukj_H_L_A,False
9jqu,H,L,0,A,protein,,envelopment polyprotein,VIRAL PROTEIN/IMMUNE SYSTEM,06/18/25,The crystal structure of SFTSV Gn and SD4 antibody complex,Homo sapiens; SFTS virus JS4,homo sapiens,homo sapiens,sfts virus js4,"Shi, W.F., Quan, C.S., Qi, J.X.",3.3,X-RAY DIFFRACTION,0.289,0.250,False,True,IGHV3,IGKV1,Kappa,,,,,,9jqu_H_L_A,False
8wsu,B,C,0,A,protein,,glycoprotein c,VIRAL PROTEIN/IMMUNE SYSTEM,06/12/24,Crystal structure of SFTSV Gc and antibody,Homo sapiens; SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010),homo sapiens,homo sapiens,sfts phlebovirus (isolatesftsv/human/china/hb29/2010) ,"Chang, Z., Gao, F., Wu, Y.",3.3,X-RAY DIFFRACTION,0.267,0.207,False,True,IGHV3,IGKV1,Kappa,,,,,,8wsu_B_C_A,False
8jio,C,B,0,A,protein,,spike glycoprotein,VIRAL PROTEIN,05/29/24,XBB spike protein (S) in complex with monoclonal antibody 6I18,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Ma, Y., Mao, Q., Wang, Y., Zhang, Z.",3.3,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV1,Kappa,,,,,,8jio_C_B_A,False
4zxb,A,B,0,E,protein,,insulin receptor,HORMONE RECEPTOR/IMMUNE SYSTEM,05/20/15,"Structure of the human insulin receptor ectodomain, IRDeltabeta construct, in complex with four Fab molecules",MUS MUSCULUS; HOMO SAPIENS,mus musculus,mus musculus,homo sapiens,"Croll, T., Smith, B.J., Margetts, M.B., Whittaker, J., Weiss, M.A., Ward, C.W., Lawrence, M.C.",3.3,X-RAY DIFFRACTION,0.237,0.205,False,True,IGHV2,IGKV8,Kappa,,,,,,4zxb_A_B_E,False
6vrh,B,C,0,A,protein,,sodium-dependent serotonin transporter,TRANSPORT PROTEIN,02/07/20,Cryo-EM structure of the wild-type human serotonin transporter complexed with paroxetine and 8B6 Fab,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Coleman, J.A., Navratna, V., Yang, D.",3.3,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV6,Kappa,,,,,,6vrh_B_C_A,False
8ag1,h,l,0,a,protein,,unknown,IMMUNE SYSTEM,07/19/23,Crystal structure of a novel OX40 antibody,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Gao, H., Zhou, A.",3.303,X-RAY DIFFRACTION,0.268,0.194,False,False,IGHV6,IGKV3,Kappa,,,,,,8ag1_h_l_a,False
7dpm,J,K,0,L,protein,,spike protein s1,IMMUNE SYSTEM/VIRAL PROTEIN,12/20/20,Crystal structure of SARS-CoV-2 Spike RBD in complex with MW06 Fab,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Wang, J., Jiao, S., Wang, R., Zhang, J., Zhang, M., Wang, M.",3.304,X-RAY DIFFRACTION,0.263,0.217,False,True,IGHV3,IGKV1,Kappa,,,,,,7dpm_J_K_L,False
8w0y,A,B,0,D,protein,,envelope glycoprotein e2,IMMUNE SYSTEM/VIRAL PROTEIN,03/27/24,Crystal structure of broadly neutralizing antibody hcab17 in complex with Hepatitis C virus envelope glycoprotein E2 ectodomain,Hepacivirus hominis; Homo sapiens,homo sapiens,homo sapiens,hepacivirus hominis,"Flyak, A.I., Wilcox, X.E.",3.31,X-RAY DIFFRACTION,0.253,0.209,False,True,IGHV4,IGKV1,Kappa,,,,,,8w0y_A_B_D,False
8tjs,P,S,0,B,protein,,envelope glycoprotein gp41,Viral PROTEIN/iMMUNE SYSTEM,07/31/24,CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO GPZ6-a.01 FAB,Human immunodeficiency virus 1; Macaca,macaca,macaca,human immunodeficiency virus 1,"Morano, N.C., Becker, J.E., Shapiro, L.",3.31,ELECTRON MICROSCOPY,,,False,True,unknown,unknown,unknown,,,,,,8tjs_P_S_B,False
6c6y,H,L,0,R,protein,,spike glycoprotein,IMMUNE SYSTEM,01/19/18,Crystal structure of Middle-East Respiratory Syndrome (MERS) coronavirus neutralizing antibody JC57-14 isolated from a vaccinated rhesus macaque in complex with MERS Receptor Binding Domain,MACACA MULATTA; BETACORONAVIRUS ENGLAND 1,macaca mulatta,macaca mulatta,betacoronavirus england 1,"Joyce, M.G., Mascola, J.R., Graham, B.S., Kwong, P.D.",3.32,X-RAY DIFFRACTION,0.267,0.232,False,True,IGHV4,IGKV1,Kappa,,,,,,6c6y_H_L_R,False
6ii8,J,K,0,E,protein,,hemagglutinin,IMMUNE SYSTEM,10/03/18,Crystal structure of H7 hemagglutinin from A/Anhui/1/2013 in complex with a human neutralizing antibody L4B-18,INFLUENZA A VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus,"Jiang, H.H., Shi, Y., Qi, J., Gao, G.F.",3.32,X-RAY DIFFRACTION,0.251,0.203,False,True,IGHV3,IGLV6,Lambda,3.8600000000000004e-07,-8.749460362550247,SPR,,TBD,6ii8_J_K_E,False
6ii8,H,L,0,C,protein,,hemagglutinin,IMMUNE SYSTEM,10/03/18,Crystal structure of H7 hemagglutinin from A/Anhui/1/2013 in complex with a human neutralizing antibody L4B-18,INFLUENZA A VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus,"Jiang, H.H., Shi, Y., Qi, J., Gao, G.F.",3.32,X-RAY DIFFRACTION,0.251,0.203,False,True,IGHV3,IGLV6,Lambda,3.8600000000000004e-07,-8.749460362550247,SPR,,TBD,6ii8_H_L_C,False
8wze,H,L,0,C,protein,,rsv pre-fusion glycoprotein,VIRAL PROTEIN,11/13/24,Cryo-EM structure of prefusion-stabilized RSV F (DS-Cav1 sc9-10 strain: B18537) in complex with humanized nAb 5B11 (localized refinement),Human respiratory syncytial virus B; Mus musculus,mus musculus,mus musculus,human respiratory syncytial virus b,"Liu, L., Sun, H., Sun, Y., Zheng, Q., Li, S., Zheng, Z., Xia, N.",3.32,ELECTRON MICROSCOPY,,,False,True,IGHV9,IGKV12,Kappa,,,,,,8wze_H_L_C,False
8eay,H,L,0,A,protein,,fusion glycoprotein f0,BIOSYNTHETIC PROTEIN,08/16/23,HMPV F complex with 4I3 Fab,Homo sapiens; Human metapneumovirus A,homo sapiens,homo sapiens,human metapneumovirus a,"Wen, X., Jardetzky, T.S.",3.33,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGLV3,Lambda,,,,,,8eay_H_L_A,False
9cbn,E,F,0,D,protein,,structural protein,VIRAL PROTEIN/IMMUNE SYSTEM,12/25/24,HAstV1 spike in complex with neutralizing Fabs 3H4 and 3B4,Human astrovirus 1; Mus musculus,mus musculus,mus musculus,human astrovirus 1,"Lanning, S., DuBois, R.M., Balasco Serrao, V.H.",3.33,ELECTRON MICROSCOPY,,,False,True,IGHV2,IGLV1,Lambda,,,,,,9cbn_E_F_D,False
9l6c,A,B,0,E,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,03/19/25,"Cryo-EM structure of Delta RBD complexed with ConD-852, P2C-1F11 and S304 Fabs",Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zheng, Z., Bing, J., Congcong, L., Bing, Z.",3.33,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV3,Kappa,,,,,,9l6c_A_B_E,False
9l6c,D,F,0,E,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,03/19/25,"Cryo-EM structure of Delta RBD complexed with ConD-852, P2C-1F11 and S304 Fabs",Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zheng, Z., Bing, J., Congcong, L., Bing, Z.",3.33,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV3,Kappa,,,,,,9l6c_D_F_E,False
9j4c,H,L,0,A,protein,,plexin-a1,PROTEIN BINDING/IMMUNE SYSTEM,01/21/26,Cryo-EM structure of aPlexinA1-19-43 Fab in complex with PlexinA1 dimer,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Tian, H., Fung, C.P.",3.33,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV4,Kappa,,,,,,9j4c_H_L_A,False
3v6z,C,D,0,E,protein,,e-antigen,IMMUNE SYSTEM,12/20/11,Crystal Structure of Hepatitis B Virus e-antigen,HEPATITIS B VIRUS; MUS MUSCULUS,mus musculus,mus musculus,hepatitis b virus,"Dimattia, M.A., Watts, N.R., Stahl, S.J., Grimes, J.M., Steven, A.C., Stuart, D.I., Wingfield, P.T.",3.34,X-RAY DIFFRACTION,0.233,0.234,False,False,IGHV5,IGKV8,Kappa,3.3e-09,-11.570817226937056,SPR,,TBD,3v6z_C_D_E,False
6bpe,E,F,0,D,protein,,"reticulocyte binding protein 2, putative",CELL INVASION,11/22/17,Plasmodium vivax reticulocyte binding protein 2b (PvRBP2b) bound to monoclonal antibody 6H1,PLASMODIUM VIVAX (STRAIN SALVADOR I); MUS MUSCULUS,mus musculus,mus musculus,plasmodium vivax (strain salvador i),"Gruszczyk, J., Chan, L.J., Tham, W.H.",3.34,X-RAY DIFFRACTION,0.367,0.318,False,False,IGHV5,IGKV6,Kappa,,,,,,6bpe_E_F_D,False
7ur4,F,G,0,B,protein,,fusion glycoprotein f0,VIRAL PROTEIN/IMMUNE SYSTEM,04/21/22,Cryo-EM Structure of the Neutralizing Antibody MPV467 in Complex with Prefusion Human Metapneumovirus F Glycoprotein,HUMAN METAPNEUMOVIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,human metapneumovirus,"Rush, S.A., McLellan, J.S.",3.34,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV3,Lambda,,,,,,7ur4_F_G_B,False
7y6k,J,I,0,B,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,07/19/23,Cryo-EM structure of SARS-CoV-2 receptor binding domain in complex with K202.B bispecific antibody,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Yoo, Y., Cho, H.S.",3.34,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV1,Lambda,,,,,,7y6k_J_I_B,False
9jqp,H,I,0,A,protein,,butyrophilin subfamily 3 member a1,IMMUNE SYSTEM,06/18/25,Cryo-EM structure of the HMBPP-primed BTN3A1-BTN3A2-BTN2A1 in complex with agonist antibody TH001,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Zhang, M., Wang, Y.Q., Xiao, J.Y.",3.34,ELECTRON MICROSCOPY,,,False,False,IGHV1,IGKV1,Kappa,,,,,,9jqp_H_I_A,False
7ox2,A,L,0,T,protein,,interleukin-9,CYTOKINE,12/28/22,Fab 6E2: hIL-9 complex,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"De Vos, T., Savvides, S.N.",3.34,X-RAY DIFFRACTION,0.284,0.224,False,True,IGHV1,IGLV3,Lambda,,,,,,7ox2_A_L_T,False
9jq6,J,K,0,E,protein,,butyrophilin subfamily 2 member a1,IMMUNE SYSTEM,06/18/25,Cryo-EM structure of BTN2A1 in complex with antagonist antibody TH002,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Zhang, M., Wang, Y.Q., Xiao, J.Y.",3.34,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV3,Kappa,,,,,,9jq6_J_K_E,False
8wdt,C,B,0,A,protein,,adenosine receptor a2a,MEMBRANE PROTEIN,01/17/24,Crystal structure of the human adenosine A2A receptor in complex with photoresponsive ligand photoNECA(blue),Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Araya, T., Asada, H., Iwata, S., Im, D.H.",3.34,X-RAY DIFFRACTION,0.266,0.214,False,False,IGHV1,IGKV4,Kappa,,,,,,8wdt_C_B_A,False
3rif,F,N,0,B,protein,,avermectin-sensitive glutamate-gated chloride channel gluclalpha ,transport protein/immune system,04/13/11,"C. elegans glutamate-gated chloride channel (GluCl) in complex with Fab, ivermectin and glutamate.",CAENORHABDITIS ELEGANS; MUS MUSCULUS,mus musculus,mus musculus,caenorhabditis elegans,"Hibbs, R.E., Gouaux, E.",3.345,X-RAY DIFFRACTION,0.271,0.248,False,True,IGHV1,IGLV1,Lambda,,,,,,3rif_F_N_B,False
6xq4,C,B,0,A,protein,,hemagglutinin,VIRAL PROTEIN/IMMUNE SYSTEM,07/09/20,Human antibody S8V2-47 in complex with the influenza hemagglutinin head domain of A/Beijing/262/1995(H1N1),INFLUENZA A VIRUS (A/BEIJING/262/1995(H1N1)); HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus (a/beijing/262/1995(h1n1)),"McCarthy, K.R., Harrison, S.C.",3.347,X-RAY DIFFRACTION,0.279,0.238,False,True,IGHV3,IGKV4,Kappa,,,,,,6xq4_C_B_A,False
7lcn,B,D,0,A,protein,,spike glycoprotein,IMMUNE SYSTEM,01/11/21,Structure of SARS-CoV-2 S protein in complex with N-terminal domain antibody DH1050.1,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Manne, K., Acharya, P.",3.35,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV2,Lambda,,,,,,7lcn_B_D_A,False
8vkx,H,L,0,A,protein,,vp1,VIRAL PROTEIN/IMMUNE SYSTEM,02/19/25,VX22 bound to GII.4 P domain,Homo sapiens; Norovirus Hu/GII.4/Sydney/NSW0514/2012/AU,homo sapiens,homo sapiens,norovirus hu/gii.4/sydney/nsw0514/2012/au,"Olia, A.S., Park, J., Lindesmith, L.C., Kwong, P.D.",3.35,X-RAY DIFFRACTION,0.272,0.245,False,True,IGHV3,IGLV2,Lambda,,,,,,8vkx_H_L_A,False
5xhv,H,L,0,E,protein,,hemagglutinin,VIRAL PROTEIN/IMMUNE SYSTEM,04/24/17,"Crystal Structure Of Fab S40 In Complex With Influenza Hemagglutinin, HA1 subunit.",INFLUENZA A VIRUS (A/CALIFORNIA/07/2009(H1N1)); HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus (a/california/07/2009(h1n1)),"Lee, C.C., Wang, A.H.J., Yu, C.M., Yang, A.S.",3.35,X-RAY DIFFRACTION,0.275,0.230,False,True,IGHV3,IGKV1,Kappa,,,,,,5xhv_H_L_E,False
5y9f,P,O,0,C,protein,,light chains of fab fragment of antibody 28f10,VIRAL PROTEIN/IMMUNE SYSTEM,08/24/17,Crystal structure of HPV59 pentamer in complex with the Fab fragment of antibody 28F10,HUMAN PAPILLOMAVIRUS TYPE 59; MUS MUSCULUS,mus musculus,mus musculus,human papillomavirus type 59,"Li, S.W., Li, Z.H.",3.35,X-RAY DIFFRACTION,0.261,0.230,False,False,IGHV5,IGKV1,Kappa,,,,,,5y9f_P_O_C,False
6wno,E,F,0,D,protein,,plasmodium vivax reticulocyte binding protein 2b,CELL INVASION,04/23/20,Plasmodium vivax reticulocyte binding protein 2b (PvRBP2b) bound to human monoclonal antibody 243244,HOMO SAPIENS; PLASMODIUM VIVAX (STRAIN SALVADOR I),homo sapiens,homo sapiens,plasmodium vivax (strain salvador i),"Chan, L.J., Dietrich, M.H., Tham, W.H.",3.35,X-RAY DIFFRACTION,0.284,0.245,False,True,IGHV3,IGLV2,Lambda,,,,,,6wno_E_F_D,False
8gb5,F,E,0,D,protein,,spike protein s1,IMMUNE SYSTEM,05/24/23,Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody 25F9,Macaca mulatta; Severe acute respiratory syndrome coronavirus 2,macaca mulatta,macaca mulatta,severe acute respiratory syndrome coronavirus2 ,"Yuan, M., Zhu, X., Wilson, I.A.",3.35,X-RAY DIFFRACTION,0.320,0.275,False,True,IGHV3,IGLV1,Lambda,,,,,,8gb5_F_E_D,False
8idn,H,L,0,A,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,06/21/23,Cryo-EM structure of RBD/E77-Fab complex,Mus musculus; Severe acute respiratory syndrome coronavirus 2,mus musculus,mus musculus,severe acute respiratory syndrome coronavirus2 ,"Lu, D.F., Zhang, Z.C.",3.35,ELECTRON MICROSCOPY,,,False,True,IGHV2,IGLV1,Lambda,,,,,,8idn_H_L_A,False
7jtf,A,B,0,E,protein,,envelope glycoprotein e2,IMMUNE SYSTEM/VIRAL PROTEIN,08/17/20,Structure of Hepatitis C Virus Envelope Glycoprotein E2 core from genotype 6a bound to broadly neutralizing antibody RM2-01,MACACA MULATTA; RECOMBINANT HEPATITIS C VIRUS HK6A/JFH-1,macaca mulatta,macaca mulatta,recombinant hepatitis c virus hk6a/jfh-1,"Tzarum, N., Wilson, I.A., Law, M.",3.35,X-RAY DIFFRACTION,0.296,0.242,False,True,IGHV1,IGKV1,Kappa,,,,,,7jtf_A_B_E,False
1za3,B,A,0,S,protein,,tumor necrosis factor receptor superfamily member 10b,IMMUNE SYSTEM/SIGNALING PROTEIN,04/05/05,The crystal structure of the YSd1 Fab bound to DR5,HOMO SAPIENS; SYNTHETIC CONSTRUCT,,,homo sapiens,"Fellouse, F.A., Li, B., Compaan, D.M., Peden, A.A., Hymowitz, S.G., Sidhu, S.S.",3.35,X-RAY DIFFRACTION,0.280,0.224,False,True,IGHV3,IGKV1,Kappa,3.4e-08,-10.18,SPR,,15854651,1za3_B_A_S,False
7wm0,H,L,0,B,protein,,spike glycoprotein,"VIRAL PROTEIN,IMMUNE SYSTEM",08/17/22,Cryo-EM structure of the Omicron RBD in complex with 35B5 Fab( local refinement of the RBD and 35B5 Fab),Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Wang, X., Zhu, Y.",3.35,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV2,Kappa,,,,,,7wm0_H_L_B,False
4iof,C,D,0,A,protein,,insulin-degrading enzyme,HYDROLASE,01/07/13,Crystal structure analysis of Fab-bound human Insulin Degrading Enzyme (IDE),HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"McCord, L.A., Liang, W.G, Hoey, R., Dowdell, E., Koide, A., Koide, S., Tang, W.J.",3.353,X-RAY DIFFRACTION,0.280,0.232,False,True,IGHV3,IGKV1,Kappa,4e-09,-11.456840020052727,SPR,,TBD,4iof_C_D_A,False
4iof,E,F,0,B,protein,,insulin-degrading enzyme,HYDROLASE,01/07/13,Crystal structure analysis of Fab-bound human Insulin Degrading Enzyme (IDE),HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"McCord, L.A., Liang, W.G, Hoey, R., Dowdell, E., Koide, A., Koide, S., Tang, W.J.",3.353,X-RAY DIFFRACTION,0.280,0.232,False,True,IGHV3,IGKV1,Kappa,4e-09,-11.456840020052727,SPR,,TBD,4iof_E_F_B,False
8tnn,H,G,0,C,protein,,glycoprotein 42,IMMUNE SYSTEM,03/27/24,Crystal structure of Epstein-Barr virus gH/gL/gp42 in complex with gp42 antibody A10,Human gammaherpesvirus 4; Macaca fascicularis,macaca fascicularis,macaca fascicularis,human gammaherpesvirus 4,"Bu, W., Kumar, A., Board, N., Kim, J., Dowdell, K., Zhang, S., Lei, Y., Hostal, A., Krogmann, T., Wang, Y., Pittaluga, S., Marcotrigiano, J., Cohen, J.I.",3.36,X-RAY DIFFRACTION,0.281,0.234,False,True,IGHV6,IGLV3,Lambda,,,,,,8tnn_H_G_C,False
8u4q,H,L,0,R,protein,,c-x-c chemokine receptor type 4,SIGNALING PROTEIN/IMMUNE SYSTEM,03/13/24,Structure of REGN7663 Fab-bound CXCR4/Gi complex,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Saotome, K., McGoldrick, L.L., Franklin, M.C.",3.36,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV2,Kappa,,,,,,8u4q_H_L_R,False
4idj,H,L,0,A,protein,,alpha-hemolysin,IMMUNE SYSTEM,12/12/12,S.Aureus a-hemolysin monomer in complex with Fab,STAPHYLOCOCCUS AUREUS; HOMO SAPIENS,homo sapiens,homo sapiens,staphylococcus aureus,"Strop, P.",3.36,X-RAY DIFFRACTION,0.296,0.249,False,True,IGHV1,IGKV3,Kappa,1.6999999999999998e-12,-16.056540494021775,Unknown,,TBD,4idj_H_L_A,False
8u1q,H,L,0,A,protein,,neuraminidase,HYDROLASE,03/27/24,A mechanistic understanding of protective influenza B neuraminidase mAbs at the airway interface,Homo sapiens; Influenza B virus (B/Iowa/06/2017),homo sapiens,homo sapiens,influenza b virus (b/iowa/06/2017),"Ferguson, J.A., Oeverdieck, S., Ward, A.B.",3.36,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV1,Kappa,,,,,,8u1q_H_L_A,False
9mpw,H,L,0,S,protein,,spike protein s2,IMMUNE SYSTEM,07/09/25,SARS-CoV2 Spike S2 Subunit in complex with M15 Antibody Fragment,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Sapse, I.A., Bajic, G.",3.37,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV3,Kappa,,,,,,9mpw_H_L_S,False
9d7p,J,I,0,C,protein,,surface protein gp120,VIRAL PROTEIN/IMMUNE SYSTEM,06/04/25,Cryo-EM structure of BG505 DS-SOSIP.664 with 2 CH103 Fabs bound,Homo sapiens; Human immunodeficiency virus 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Parsons, R.J., Acharya, P.",3.37,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGLV3,Lambda,,,,,,9d7p_J_I_C,False
6uyg,H,L,0,E,protein,,envelope glycoprotein e2,IMMUNE SYSTEM,11/13/19,Structure of Hepatitis C Virus Envelope Glycoprotein E2c3 core from genotype 6a bound to broadly neutralizing antibody AR3B and non neutralizing antibody E1,RECOMBINANT HEPATITIS C VIRUS HK6A/JFH-1; HOMO SAPIENS; STREPTOCOCCUS SP.,homo sapiens,homo sapiens,recombinant hepatitis c virus hk6a/jfh-1,"Tzarum, N., Wilson, I.A., Zhu, J.",3.375,X-RAY DIFFRACTION,0.306,0.254,False,True,IGHV1,IGKV3,Kappa,,,,,,6uyg_H_L_E,False
9b82,N,M,0,D,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,12/04/24,Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody COVA2-15,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Yuan, M., Zhu, X., Wilson, I.A.",3.38,X-RAY DIFFRACTION,0.295,0.242,False,True,IGHV3,IGKV2,Kappa,,,,,,9b82_N_M_D,False
6x98,K,J,0,G,protein,,bg505 hiv-1 env gp120,VIRAL PROTEIN/IMMUNE SYSTEM,06/02/20,Cryo-EM model of HIV-1 Env BG505 SOSIP.664 in complex with rabbit monoclonal antibody 11B fragment antigen binding variable domain,HUMAN IMMUNODEFICIENCY VIRUS 1; ORYCTOLAGUS CUNICULUS,oryctolagus cuniculus,oryctolagus cuniculus,human immunodeficiency virus 1,"Ozorowski, G., Cottrell, C.A., Ward, A.B.",3.38,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,6x98_K_J_G,False
3bsz,N,M,0,E,protein,,plasma retinol-binding protein,TRANSPORT PROTEIN/IMMUNE SYSTEM,12/27/07,Crystal structure of the transthyretin-retinol binding protein-Fab complex,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Zanotti, G., Cendron, L., Gliubich, F., Folli, C., Berni, R.",3.38,X-RAY DIFFRACTION,0.312,0.239,False,True,IGHV1,IGKV3,Kappa,,,,,,3bsz_N_M_E,False
9mq9,J,N,0,E,protein,,hemagglutinin ha1 chain,VIRAL PROTEIN/IMMUNE SYSTEM,08/13/25,Cryo-EM structure of hemagglutinin H5N1 in complex with Fab 326-289.74,Homo sapiens; Influenza A virus,homo sapiens,homo sapiens,influenza a virus,"Malla, T.N., Tsybovsky, Y., Zhou, T.",3.38,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,9mq9_J_N_E,False
8dpz,F,G,0,B,protein,,spike protein s1,VIRAL PROTEIN/Immune System,08/02/23,Local refinement of SARS-CoV-2 vaccine induced antibody DH1338 bound to SARS-CoV-2 HexaPro RBD Spike ectodomain,Macaca mulatta; Severe acute respiratory syndrome coronavirus 2,macaca mulatta,macaca mulatta,severe acute respiratory syndrome coronavirus2 ,"Stalls, V., May, A.J., Acharya, P.",3.38,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV3,Kappa,,,,,,8dpz_F_G_B,False
8cyh,H,L,0,M,protein,,"mesothelin, cleaved form",ANTITUMOR PROTEIN,06/07/23,"Novel Anti-Mesothelin Antibodies Enable Crystallography of the Intact Mesothelin Ectodo- main and Engineering of Potent, T cell-engaging Bispecific Therapeutics",Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Bandaranayake, A.D., Rupert, P.B., Lin, I., Pilat, K., Ruff, R.O., Friend, D.J., Chan, M.K., Clarke, M., Carter, J., Meshinchi, S., Mehlin, C., Olson, J.M., Strong, R.K., Correnti, C.E.",3.38,X-RAY DIFFRACTION,0.268,0.230,False,True,IGHV3,IGKV1,Kappa,,,,,,8cyh_H_L_M,False
5k9o,H,L,0,I,protein,,hemagglutinin,IMMUNE SYSTEM,06/01/16,Crystal structure of multidonor HV6-1-class broadly neutralizing Influenza A antibody 31.b.09 in complex with Hemagglutinin H1 A/California/04/2009.,INFLUENZA A VIRUS (STRAIN SWL A/CALIFORNIA/04/2009 H1N1); HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus (strain swla/california/04/2009 h1n1) ,"Joyce, M.G., Thomas, P.V., Wheatley, A.K., McDermott, A.B., Mascola, J.R., Kwong, P.D.",3.387,X-RAY DIFFRACTION,0.346,0.291,False,True,IGHV1,IGKV2,Kappa,,,,,,5k9o_H_L_I,False
4yfl,H,L,0,G,protein,,"envelope glycoprotein gp160,envelope glycoprotein gp160,envelope glycoprotein gp160 ",IMMUNE SYSTEM,02/25/15,Crystal structure of VH1-46 germline-derived CD4-binding site-directed antibody 1B2530 in complex with HIV-1 clade A/E 93TH057 gp120,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Acharya, P., Zhou, T., Moquin, S., Kwong, P.D.",3.387,X-RAY DIFFRACTION,0.326,0.268,False,True,unknown,IGLV1,Lambda,,,,,,4yfl_H_L_G,False
4xnz,H,L,0,G,protein,,"envelope glycoprotein gp160,envelope glycoprotein gp160",IMMUNE SYSTEM,01/16/15,Crystal structure of broadly and potently neutralizing antibody VRC06B in complex with HIV-1 clade A/E strain 93TH057 gp120,HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Zhou, T., Srivatsan, S., Kwong, P.D.",3.389,X-RAY DIFFRACTION,0.301,0.244,False,True,unknown,unknown,unknown,,,,,,4xnz_H_L_G,False
8zeu,H,L,0,C,protein,,thymic stromal lymphopoietin,IMMUNE SYSTEM,05/28/25,CryoEM structure of GR2002-F(ab')2: TSLP complex,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Zhigang, L., Junjie, H.",3.39,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,8zeu_H_L_C,False
7zfd,A,B,0,F,protein,,spike protein s1,VIRAL PROTEIN,04/01/22,SARS-CoV-2 Omicron RBD in complex with Omi-25 Fab,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, D., Huo, J., Ren, J., Stuart, D.I.",3.39,X-RAY DIFFRACTION,0.338,0.286,False,True,IGHV3,IGKV1,Kappa,,,,,,7zfd_A_B_F,False
4s1s,H,L,0,G,protein,,clade a/e 93th057 hiv-1 gp120 core,VIRAL PROTEIN/IMMUNE SYSTEM/INHIBITOR,01/14/15,"Crystal structure of a VRC01-lineage antibody, 45-VRC01.H5.F-185917, in complex with clade A/E HIV-1 gp120 core",HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Kwon, Y.D., Yang, Y., Zhang, B., Kwong, P.D.",3.39,X-RAY DIFFRACTION,0.300,0.262,False,True,unknown,IGKV3,Kappa,,,,,,4s1s_H_L_G,False
7u9g,H,E,0,C,protein,,glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,07/20/22,Rabies virus glycoprotein pre-fusion trimer in complex with neutralizing antibody RVA122,Homo sapiens; Rabies virus,homo sapiens,homo sapiens,rabies virus,"Callaway, H.M., Zyla, D., Larrous, F., Dias de Melo, G., Hastie, K.M., Avalos, R.D., Agarwal, A., Bouhry, H., Corti, D., Saphire, E.O.",3.39,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGLV1,Lambda,,,,,,7u9g_H_E_C,False
9msc,A,B,0,E,protein,,envelope glycoprotein e2,VIRAL PROTEIN/IMMUNE SYSTEM,01/14/26,Structure of Hepatitis C Virus Envelope Glycoprotein HCV-1 E2ecto from genotype 1a bound to neutralizing antibody RM5-16,Hepatitis C virus (isolate 1); Homo sapiens; Macaca mulatta,homo sapiens,homo sapiens,hepatitis c virus (isolate 1),"Nguyen, T.K.Y., Stanfield, R.L., Wilson, I.A.",3.39,X-RAY DIFFRACTION,0.317,0.278,False,True,IGHV1,IGLV1,Lambda,,,,,,9msc_A_B_E,False
8zeu,A,B,0,C,protein,,thymic stromal lymphopoietin,IMMUNE SYSTEM,05/28/25,CryoEM structure of GR2002-F(ab')2: TSLP complex,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Zhigang, L., Junjie, H.",3.39,ELECTRON MICROSCOPY,,,False,True,IGHV2,IGKV3,Kappa,,,,,,8zeu_A_B_C,False
5igx,H,L,0,G,protein,,426c.tm1deltav1-3 gp120,IMMUNE SYSTEM,02/28/16,Crystal structure of NIH45-46 Fab germline precursor in complex with 426c.TM1deltaV1-3 gp120,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Scharf, L., Bjorkman, P.J.",3.39,X-RAY DIFFRACTION,0.286,0.280,False,True,IGHV1,IGKV3,Kappa,7.110000000000001e-07,-8.387550558127923,SPR,,TBD,5igx_H_L_G,False
5ibl,C,D,0,F,protein,,hemagglutinin,IMMUNE SYSTEM,02/22/16,Human antibody 6639 in complex with influenza hemagglutinin H1 X-181,INFLUENZA A VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus,"Raymond, D.D., Harrison, S.C.",3.39,X-RAY DIFFRACTION,0.257,0.214,False,True,IGHV5,IGKV3,Kappa,,,,,,5ibl_C_D_F,False
9n5i,F,E,0,D,protein,,gametocyte surface protein p45/48,IMMUNE SYSTEM,10/15/25,Endogenous Pfs230D13-14 in complex with Pfs48/45 bound to anti-Pfs48/45 Fabs RUPA-71 and RUPA-44,Homo sapiens; Plasmodium falciparum,homo sapiens,homo sapiens,plasmodium falciparum,"Hailemariam, S., Heide, F., Bekkering, E., Ivanochko, D., Yoo, R., Julien, J.P.",3.39,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV1,Kappa,,,,,,9n5i_F_E_D,False
9msc,H,L,0,E,protein,,envelope glycoprotein e2,VIRAL PROTEIN/IMMUNE SYSTEM,01/14/26,Structure of Hepatitis C Virus Envelope Glycoprotein HCV-1 E2ecto from genotype 1a bound to neutralizing antibody RM5-16,Hepatitis C virus (isolate 1); Homo sapiens; Macaca mulatta,macaca mulatta,macaca mulatta,hepatitis c virus (isolate 1),"Nguyen, T.K.Y., Stanfield, R.L., Wilson, I.A.",3.39,X-RAY DIFFRACTION,0.317,0.278,False,True,IGHV4,IGLV1,Lambda,,,,,,9msc_H_L_E,False
9n5i,H,L,0,D,protein,,gametocyte surface protein p45/48,IMMUNE SYSTEM,10/15/25,Endogenous Pfs230D13-14 in complex with Pfs48/45 bound to anti-Pfs48/45 Fabs RUPA-71 and RUPA-44,Homo sapiens; Plasmodium falciparum,homo sapiens,homo sapiens,plasmodium falciparum,"Hailemariam, S., Heide, F., Bekkering, E., Ivanochko, D., Yoo, R., Julien, J.P.",3.39,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV3,Kappa,,,,,,9n5i_H_L_D,False
4dag,H,L,0,A,protein,,fusion glycoprotein f0,VIRAL PROTEIN/IMMUNE SYSTEM,01/12/12,Structure of the Human Metapneumovirus Fusion Protein with Neutralizing Antibody Identifies a Pneumovirus Antigenic Site,HUMAN METAPNEUMOVIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,human metapneumovirus,"Jardetzky, T.S., Wen, X.",3.3904,X-RAY DIFFRACTION,0.289,0.260,False,True,IGHV3,IGLV3,Lambda,,,,,,4dag_H_L_A,False
6glx,C,D,0,B,protein,,galectin-10,SUGAR BINDING PROTEIN,05/23/18,"Structure of galectin-10 in complex with the Fab fragment of a Charcot-Leyden crystal solubilizing antibody, 4E8",HOMO SAPIENS; LAMA GLAMA,lama glama,lama glama,homo sapiens,"Verstraete, K., Verschueren, K., Savvides, S.N.",3.396,X-RAY DIFFRACTION,0.360,0.303,False,True,IGHV4,IGLV3,Lambda,,,,,,6glx_C_D_B,False
5cd5,C,D,0,A,protein,,93th057 hiv-1 gp120 core,IMMUNE SYSTEM,07/03/15,Crystal structure of an immature VRC01-class antibody DRVIA7 from a Chinese donor bound to clade A/E HIV-1 gp120 core,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Kong, L., Wilson, I.A.",3.396,X-RAY DIFFRACTION,0.306,0.253,False,True,unknown,IGKV1,Kappa,2.89e-07,-8.920931468069222,SPR,,TBD,5cd5_C_D_A,False
7ldd,K,J,0,D,protein,,glutamate receptor,MEMBRANE PROTEIN/IMMUNE SYSTEM,01/13/21,native AMPA receptor,MUS MUSCULUS,mus musculus,mus musculus,mus musculus,"Yu, J., Rao, P., Gouaux, E.",3.4,ELECTRON MICROSCOPY,,,False,True,IGHV2,IGKV10,Kappa,,,,,,7ldd_K_J_D,False
7k8t,M,N,0,B,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,09/27/20,"Structure of the SARS-CoV-2 S 2P trimer in complex with the human neutralizing antibody Fab fragment, C002 (state 1)",SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Malyutin, A.G., Barnes, C.O., Bjorkman, P.J.",3.4,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7k8t_M_N_B,False
7zmk,S,T,0,U,protein,,microfibril-associated glycoprotein 4,CELL ADHESION,03/01/23,Structure of human MFAP4 in complex with the Fab fragment of the AS0326 monoclonal antibody,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Laursen, N.S., Andersen, G.R.",3.4,X-RAY DIFFRACTION,0.277,0.239,False,True,IGHV1,IGKV1,Kappa,,,,,,7zmk_S_T_U,False
7ugq,I,L,0,C,protein,,envelope glycoprotein gp120,VIRAL PROTEIN/IMMUNE SYSTEM,11/09/22,Cryo-EM structure of BG24 Fabs with an inferred germline CDRL1 and 10-1074 Fabs in complex with HIV-1 Env 6405-SOSIP.664,Homo sapiens; Human immunodeficiency virus 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Dam, K.A., Bjorkman, P.J.",3.4,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV2,Lambda,,,,,,7ugq_I_L_C,False
7ld1,H,L,0,B,protein,,spike glycoprotein,IMMUNE SYSTEM,01/12/21,Structure of SARS-CoV-2 S protein in complex with Receptor Binding Domain antibody DH1047,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Manne, K., Acharya, P.",3.4,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV4,Kappa,,,,,,7ld1_H_L_B,False
5ug0,D,C,0,A,protein,,hemagglutinin ha1,VIRAL PROTEIN/IMMUNE SYSTEM,01/06/17,Human antibody H2897 in complex with influenza hemagglutinin H1 Solomon Islands/03/2006,HOMO SAPIENS; INFLUENZA A VIRUS (A/SOLOMON ISLANDS/3/2006(H1N1)),homo sapiens,homo sapiens,influenza a virus (a/solomonislands/3/2006(h1n1)) ,"Raymond, D.D., Caradonna, T., Schmidt, A.G., Harrison, S.C.",3.4,X-RAY DIFFRACTION,0.278,0.240,False,True,IGHV3,IGKV3,Kappa,,,,,,5ug0_D_C_A,False
6d11,C,D,0,E,peptide,,nanp5,IMMUNE SYSTEM,04/11/18,Crystal structure of 1450 Fab in complex with circumsporozoite protein NANP5,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,plasmodium falciparum,"Scally, S.W., Bosch, A., Imkeller, K., Wardemann, H., Julien, J.P.",3.4,X-RAY DIFFRACTION,0.299,0.254,False,True,IGHV3,IGKV1,Kappa,,,,,,6d11_C_D_E,False
7ui0,I,M,0,B,protein,,envelope glycoprotein b,VIRAL PROTEIN/Immune System,01/08/09,Post-fusion ectodomain of HSV-1 gB in complex with HSV010-13 Fab,Human alphaherpesvirus 1 strain KOS; Mus musculus,mus musculus,mus musculus,human alphaherpesvirus 1 strain kos,"Windsor, I.W., Kong, S.L., Garforth, S.J., Almo, S.C., Harrison, S.C.",3.4,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV13,Kappa,,,,,,7ui0_I_M_B,False
7ugn,G,J,0,A,protein,,envelope glycoprotein gp120,VIRAL PROTEIN/IMMUNE SYSTEM,10/26/22,Cryo-EM structure of BG24 inferred germline Fabs with germline CDR3s and 10-1074 Fabs in complex with HIV-1 Env immunogen BG505-SOSIPv4.1-GT1 - Class 1,Homo sapiens; Human immunodeficiency virus 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Dam, K.A., Bjorkman, P.J.",3.4,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV2,Lambda,,,,,,7ugn_G_J_A,False
7wt7,H,D,0,C,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,06/07/23,SARS-CoV-2 Omicron variant spike in complex with Fab 9A8 (State 1),Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Wang, X., Wang, L.",3.4,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7wt7_H_D_C,False
9msy,P,R,0,C,protein,,v703-0537_t278m_l14 sosip,VIRAL PROTEIN/IMMUNE SYSTEM,05/28/25,G002-480-0546 Fab in complex with V703-0537_T278M_L14 SOSIP and BG18 Fab,Homo sapiens; Human immunodeficiency virus 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Phulera, S., Ozorowski, G., Ward, A.B.",3.4,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,9msy_P_R_C,False
9cu5,H,L,0,B,protein,,hiv env jrfl nfl td cc3+ gp140,VIRAL PROTEIN/IMMUNE SYSTEM,05/21/25,LJF-085 Fab in complex with HIV Env JRFL NFL TD CC3+ trimer and 35O22 Fab,Homo sapiens; Human immunodeficiency virus 1; Macaca mulatta,macaca mulatta,macaca mulatta,human immunodeficiency virus 1,"Ozorowski, G., Ward, A.B.",3.4,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV1,Kappa,,,,,,9cu5_H_L_B,False
4m7l,H,L,0,T,protein,,tissue factor,BLOOD CLOTTING/IMMUNE SYSTEM,08/12/13,Crystal structure of the complex between human tissue factor extracellular domain and antibody 10H10 FAB fragment,"HOMO SAPIENS; MUS MUSCULUS, HOMO SAPIENS","mus musculus, homo sapiens","mus musculus, homo sapiens",homo sapiens,"Teplyakov, A., Obmolova, G., Malia, T., Gilliland, G.L.",3.4,X-RAY DIFFRACTION,0.289,0.242,False,True,IGHV1,IGKV8,Kappa,,,,,,4m7l_H_L_T,False
9kef,H,L,0,A,protein,,rabv-g,VIRAL PROTEIN,04/23/25,Crystal strucutre of RABV-G in complex with SOJB-Fab complex,Homo sapiens; Rabies virus CVS-11,homo sapiens,homo sapiens,rabies virus cvs-11,"Lu, G., Yang, F., Lin, S.",3.4,X-RAY DIFFRACTION,0.264,0.217,False,True,IGHV2,IGLV3,Lambda,,,,,,9kef_H_L_A,False
9e82,H,L,0,A,protein,,beta-arrestin-1,SIGNALING PROTEIN/IMMUNE SYSTEM,04/02/25,ACKR3 phosphorylated by GRK5 in complex with arrestin2 and Fab7,Bos taurus; Homo sapiens; synthetic construct,synthetic construct,synthetic construct,bos taurus,"Chen, Q., Fuller, J., Tesmer, J.J.G.",3.4,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,9e82_H_L_A,False
4p59,H,L,0,A,protein,,receptor tyrosine-protein kinase erbb-3,"Signaling protein, immune system",03/15/14,HER3 extracellular domain in complex with Fab fragment of MOR09825,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,homo sapiens,"Sprague, E.R.",3.4,X-RAY DIFFRACTION,0.250,0.184,False,True,IGHV3,IGKV1,Kappa,3.2e-11,-14.317537111324148,Solution Equilibrium Titration,,TBD,4p59_H_L_A,False
7r8m,D,E,0,C,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,06/26/21,Structure of the SARS-CoV-2 S 6P trimer in complex with neutralizing antibody C032,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"DeLaitsch, A.T., Barnes, C.O., Bjorkman, P.J.",3.4,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGLV1,Lambda,,,,,,7r8m_D_E_C,False
9bj4,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,03/05/25,"Structure of the SARS-CoV-2 S 6P trimer complex with the human neutralizing antibody Fab fragment, C952",Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Rubio, A.A., Abernathy, M.E., Barnes, C.O.",3.4,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGLV1,Lambda,,,,,,9bj4_H_L_A,False
2r4s,H,L,0,A,protein,,beta-2 adrenergic receptor,SIGNALING PROTEIN,08/31/07,Crystal structure of the human beta2 adrenoceptor,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Rasmussen, S.G.F., Choi, H.J., Rosenbaum, D.M., Kobilka, T.S., Thian, F.S., Edwards, P.C., Burghammer, M., Ratnala, V.R., Sanishvili, R., Fischetti, R.F., Schertler, G.F., Weis, W.I., Kobilka, B.K.",3.4,X-RAY DIFFRACTION,0.280,0.226,False,False,IGHV1,IGKV14,Kappa,,,,,,2r4s_H_L_A,False
9b8j,E,F,0,A,protein,,gp38,VIRAL PROTEIN,12/11/24,GP38-GnH-DS-Gc in the pre-fusion conformation,Crimean-Congo hemorrhagic fever virus strain IbAr10200; Homo sapiens,homo sapiens,homo sapiens,crimean-congo hemorrhagic fever virus strainibar10200 ,"McFadden, E., McLellan, J.S.",3.4,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,9b8j_E_F_A,False
9b8j,H,L,0,D,protein,,glycoprotein c,VIRAL PROTEIN,12/11/24,GP38-GnH-DS-Gc in the pre-fusion conformation,Crimean-Congo hemorrhagic fever virus strain IbAr10200; Homo sapiens,homo sapiens,homo sapiens,crimean-congo hemorrhagic fever virus strainibar10200 ,"McFadden, E., McLellan, J.S.",3.4,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,9b8j_H_L_D,False
7wvm,C,D,0,F,protein,,programmed cell death protein 1,IMMUNE SYSTEM/ANTITUMOR PROTEIN,02/10/22,The complex structure of PD-1 and cemiplimab,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Lu, D., Xu, Z.P., Liu, K.F., Tan, S.G., Gao, G.F., Chai, Y.",3.4,X-RAY DIFFRACTION,0.287,0.247,False,True,IGHV3,IGKV1,Kappa,,,,,,7wvm_C_D_F,False
6x96,H,L,0,A,protein,,bg505 hiv-1 env gp120,VIRAL PROTEIN/IMMUNE SYSTEM,06/02/20,Cryo-EM model of HIV-1 Env BG505 SOSIP.664 in complex with rabbit monoclonal antibody 10A fragment antigen binding variable domain,HUMAN IMMUNODEFICIENCY VIRUS 1; ORYCTOLAGUS CUNICULUS,oryctolagus cuniculus,oryctolagus cuniculus,human immunodeficiency virus 1,"Ozorowski, G., Cottrell, C.A., Ward, A.B.",3.4,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,6x96_H_L_A,False
9msy,O,Q,0,C,protein,,v703-0537_t278m_l14 sosip,VIRAL PROTEIN/IMMUNE SYSTEM,05/28/25,G002-480-0546 Fab in complex with V703-0537_T278M_L14 SOSIP and BG18 Fab,Homo sapiens; Human immunodeficiency virus 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Phulera, S., Ozorowski, G., Ward, A.B.",3.4,ELECTRON MICROSCOPY,,,False,True,unknown,IGLV3,Lambda,,,,,,9msy_O_Q_C,False
8y4a,H,L,0,C,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,09/11/24,BA.2.86 S-trimer in complex with Nab XG2v046,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhu, Q., Liu, P.",3.4,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV3,Kappa,,,,,,8y4a_H_L_C,False
9ls3,D,E,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,01/07/26,S-ECD of SARS-CoV-2 Delta variant in complex with Fab854,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Li, Y.N., Yan, R.H., Ju, B., Zhang, Z.",3.4,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV2,Kappa,,,,,,9ls3_D_E_A,False
7s6k,C,D,0,B,protein,,spike glycoprotein,VIRAL PROTEIN/Immune System,09/14/21,J08 fragment antigen binding in complex with SARS-CoV-2-6P-Mut2 S protein (conformation 2),SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Ozorowski, G., Torres, J.L., Ward, A.B.",3.4,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,7s6k_C_D_B,False
9kze,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,12/10/25,The local refined map of SARS-CoV-2 EG.5.1 Variant Spike protein complexed with antibody XGi-183,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Qiu, Y.N., Sun, L.",3.4,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV3,Lambda,,,,,,9kze_H_L_A,False
9mkn,H,L,0,B,protein,,fusion glycoprotein f1,VIRAL PROTEIN/IMMUNE SYSTEM,10/29/25,Structure of the Respiratory Syncytial Virus Fusion Protein Bound to Human Antibodies RSV_2245 and RSV_3301,Homo sapiens; Respiratory syncytial virus,homo sapiens,homo sapiens,respiratory syncytial virus,"Johnson, N.V., McLellan, J.S.",3.4,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV2,Kappa,,,,,,9mkn_H_L_B,False
9md2,H,L,0,A,protein,,neuraminidase ind11,VIRAL PROTEIN/IMMUNE SYSTEM,08/27/25,Neuraminidase in complex with mAb 5-6,Influenza A virus; Mus musculus,mus musculus,mus musculus,influenza a virus,"Ferguson, J.A., Raghavan, S.S.R., Ward, A.B.",3.4,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGKV17,Kappa,,,,,,9md2_H_L_A,False
9naq,H,L,0,A,protein,,erythrocyte membrane protein 1,IMMUNE SYSTEM,08/27/25,Cryo-EM structure of 110_C4 Fab in complex with CIDRa1.7 PfEMP1,Homo sapiens; Plasmodium falciparum,homo sapiens,homo sapiens,plasmodium falciparum,"Raghavan, S.S.R., Ward, A.B.",3.4,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV10,Lambda,,,,,,9naq_H_L_A,False
5o4o,B,A,0,C,protein,,receptor tyrosine-protein kinase erbb-3,IMMUNE SYSTEM,05/30/17,HER3 in complex with Fab MF3178,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"De Nardis, C., Gros, P.",3.4,X-RAY DIFFRACTION,0.261,0.215,False,True,IGHV1,IGKV1,Kappa,,,,,,5o4o_B_A_C,False
5jz7,J,K,0,E,protein,,beta-nerve growth factor,SIGNALING PROTEIN,05/16/16,NGF IN COMPLEX WITH MEDI578 scFv,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Olsson, L.-L., Aagaard, A.",3.4,X-RAY DIFFRACTION,0.268,0.258,False,True,IGHV1,IGLV1,Lambda,,,,,,5jz7_J_K_E,False
9ml5,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,06/04/25,Structure of the SARS-CoV-2 Spike 6P in complex with the rabbit M8b-B8 Fab,Oryctolagus cuniculus; Severe acute respiratory syndrome coronavirus 2,oryctolagus cuniculus,oryctolagus cuniculus,severe acute respiratory syndrome coronavirus2 ,"Fan, C., Bjorkman, P.J.",3.4,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,9ml5_H_L_A,False
3opz,J,N,0,C,protein,,trans-sialidase,hydrolase/immune system,09/02/10,Crystal structure of trans-sialidase in complex with the Fab fragment of a neutralizing monoclonal IgG antibody,TRYPANOSOMA CRUZI; MUS MUSCULUS,mus musculus,mus musculus,trypanosoma cruzi,"Larrieux, N., Muia, R., Campetella, O., Buschiazzo, A.",3.4,X-RAY DIFFRACTION,0.205,0.164,False,False,IGHV1,IGKV4,Kappa,,,,,,3opz_J_N_C,False
6gv1,H,L,0,A,protein,,major facilitator superfamily multidrug/h+ antiporter mdfafrom e.coli ,TRANSPORT PROTEIN,06/20/18,Crystal structure of E.coli Multidrug/H+ antiporter MdfA in outward open conformation with bound Fab fragment,ESCHERICHIA COLI K-12; MUS MUSCULUS,mus musculus,mus musculus,escherichia coli k-12,"Nagarathinam, K., Parthier, C., Stubbs, M.T., Tanabe, M.",3.4,X-RAY DIFFRACTION,0.283,0.258,False,True,IGHV2,IGKV9,Kappa,,,,,,6gv1_H_L_A,False
8tea,H,G,0,C,protein,,envelope protein ul128,VIRAL PROTEIN,08/09/23,HCMV Pentamer in complex with CS2pt1p2_A10L Fab and CS3pt1p4_C1L Fab,Homo sapiens; Human betaherpesvirus 5,homo sapiens,homo sapiens,human betaherpesvirus 5,"Goldsmith, J.G., McLellan, J.S.",3.4,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV1,Lambda,,,,,,8tea_H_G_C,False
7cws,L,C,0,Q,protein,,spike glycoprotein,VIRAL PROTEIN,08/31/20,SARS-CoV-2 Spike Proteins Trimer in Complex with FC05 and H014 Fabs Cocktail,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Wang, L., Wang, X.",3.4,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV1,Lambda,,,,,,7cws_L_C_Q,False
6b0n,D,E,0,G,protein,,envelope glycoprotein gp140,Viral protein/immune system,09/14/17,Crystal structure of the cleavage-independent prefusion HIV Env glycoprotein trimer of the clade A BG505 isolate (NFL construct) in complex with Fabs PGT122 and PGV19 at 3.39 A,HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Sarkar, A., Irimia, A., Wilson, I.A.",3.4,X-RAY DIFFRACTION,0.346,0.335,False,True,unknown,IGLV2,Lambda,,,,,,6b0n_D_E_G,False
3fmg,H,L,0,A,protein,,glycoprotein vp7,IMMUNE SYSTEM,12/22/08,Structure of rotavirus outer capsid protein VP7 trimer in complex with a neutralizing Fab,SIMIAN ROTAVIRUS; MUS MUSCULUS,mus musculus,mus musculus,simian rotavirus,"Aoki, S.T., Settembre, E.C., Trask, S.D., Greenberg, H.B., Harrison, S.C., Dormitzer, P.R.",3.4,X-RAY DIFFRACTION,0.238,0.224,False,False,IGHV1,IGKV12,Kappa,,,,,,3fmg_H_L_A,False
7lq7,C,D,0,B,protein,,spike protein s1,IMMUNE SYSTEM,02/13/21,Crystal structure of SARS-CoV-2 receptor binding domain in complex with antibodies CV503 and COVA1-16,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Yuan, M., Zhu, X., Wilson, I.A.",3.4,X-RAY DIFFRACTION,0.233,0.197,False,True,IGHV1,IGLV2,Lambda,,,,,,7lq7_C_D_B,False
8cxi,H,L,0,A,protein,,"ankyrin repeat family a protein 2,envelope e protein",VIRUS/IMMUNE SYSTEM,06/07/23,Structures of Zika Virus in Complex with Antibodies Targeting E Dimer Epitopes and Basis for Neutralization Efficacy,Homo sapiens; Zika virus,homo sapiens,homo sapiens,zika virus,"Liu, W., Zhang, X.K., Gong, D.Y., Dai, X.H., Sharma, A., Zhang, T.H., Rey, F., Zhou, Z.H.",3.4,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV2,Lambda,,,,,,8cxi_H_L_A,False
8edf,H,L,0,A,protein,,spike protein s1,IMMUNE SYSTEM,09/20/23,Bovine Fab SKD in complex with Sars COV-2 receptor binding domain,Bos taurus; Homo sapiens; Severe acute respiratory syndrome coronavirus 2,"bos taurus, homo sapiens",bos taurus,severe acute respiratory syndrome coronavirus2 ,"Stanfield, R.L., Wilson, I.A.",3.4,X-RAY DIFFRACTION,0.299,0.276,False,True,IGHV1,IGLV1,Lambda,,,,,,8edf_H_L_A,False
7v2a,G,F,0,B,protein,,spike glycoprotein,VIRAL PROTEIN,08/07/21,SARS-CoV-2 Spike trimer in complex with XG014 Fab,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Wang, K., Wang, X., Pan, L.",3.4,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGLV1,Lambda,,,,,,7v2a_G_F_B,False
8t4a,H,L,0,A,protein,,md65 n332-gt5 sosip gp120,VIRAL PROTEIN/Immune System,05/08/24,MD65 N332-GT5 SOSIP in complex with RM_N332_36 Fab and RM20A3 Fab,Human immunodeficiency virus 1; Macaca mulatta,macaca mulatta,macaca mulatta,human immunodeficiency virus 1,"Ozorowski, G., Torres, J.L., Ward, A.B.",3.4,ELECTRON MICROSCOPY,,,False,True,IGHV2,IGLV3,Lambda,,,,,,8t4a_H_L_A,False
7ey5,B,C,0,A,protein,,spike glycoprotein,VIRAL PROTEIN,05/29/21,Local CryoEM structure of the SARS-CoV-2 S6PV2 in complex with BD-771 Fab and BD-821 Fab,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhang, Z.Y.",3.4,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGKV3,Kappa,,,,,,7ey5_B_C_A,False
5w23,J,N,0,A,protein,,fusion glycoprotein f0,VIRAL PROTEIN/IMMUNE SYSTEM,06/05/17,Crystal Structure of RSV F in complex with 5C4 Fab,HUMAN RESPIRATORY SYNCYTIAL VIRUS A; MUS MUSCULUS,mus musculus,mus musculus,human respiratory syncytial virus a,"Battles, M.B., McLellan, J.S.",3.4,X-RAY DIFFRACTION,0.239,0.198,False,True,IGHV14,IGKV3,Kappa,,,,,,5w23_J_N_A,False
7ey5,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN,05/29/21,Local CryoEM structure of the SARS-CoV-2 S6PV2 in complex with BD-771 Fab and BD-821 Fab,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhang, Z.Y.",3.4,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7ey5_H_L_A,False
7mxd,X,Y,0,F,protein,,envelope glycoprotein gp120,IMMUNE SYSTEM/VIRAL PROTEIN,05/19/21,Cryo-EM structure of broadly neutralizing V2-apex-targeting antibody J038 in complex with HIV-1 Env,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS; MACACA MULATTA,macaca mulatta,macaca mulatta,human immunodeficiency virus 1,"Zhou, T., Gao, F.",3.4,ELECTRON MICROSCOPY,,,False,True,unknown,IGKV1,Kappa,,,,,,7mxd_X_Y_F,False
8onk,C,E,0,A,peptide,,insulin b chain,HORMONE,04/10/24,Human insulin in complex with the analytical antibody S1 Fab and the analytical antibody HUI-001 Fab,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Johansson, E.",3.403,X-RAY DIFFRACTION,0.311,0.258,False,True,IGHV1,IGKV4,Kappa,,,,,,8onk_C_E_A,False
8onk,K,J,0,D,peptide,,insulin a chain,HORMONE,04/10/24,Human insulin in complex with the analytical antibody S1 Fab and the analytical antibody HUI-001 Fab,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Johansson, E.",3.403,X-RAY DIFFRACTION,0.311,0.258,False,True,IGHV9,IGKV4,Kappa,,,,,,8onk_K_J_D,False
7tz5,J,M,0,B,protein,,hemagglutinin,VIRAL PROTEIN/IMMUNE SYSTEM,07/06/22,Cryo-EM structure of antibody TJ5-5 bound to H3 COBRA TJ5 hemagglutinin,Homo sapiens; Influenza A virus,homo sapiens,homo sapiens,influenza a virus,"Abbadi, N.S., Mousa, J.J.",3.41,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV1,Lambda,,,,,,7tz5_J_M_B,False
9lbs,D,C,0,F,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,04/02/25,"Cryo-EM structure of Omicron BA.1 RBD complexed with ConBA-998,S309 and S304Fabs",Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhang, Z., Ju, B., Liu, C.",3.41,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV3,Lambda,,,,,,9lbs_D_C_F,False
8k5g,H,L,0,A,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,12/27/23,Structure of the SARS-CoV-2 BA.1 RBD with UT28-RD,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Chen, L., Kita, S., Anraku, Y., Maenaka, K.",3.41,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,8k5g_H_L_A,False
8r8k,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN,05/08/24,XBB-4 Fab in complex with SARS-CoV-2 BA.2.12.1 Spike Glycoprotein,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Duyvesteyn, H.M.E., Ren, J., Stuart, D.I.",3.41,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8r8k_H_L_A,False
6o3j,H,L,0,G,peptide,,"mper peptide, region 671-683 of hiv-1 gp41",IMMUNE SYSTEM,02/26/19,Crystal structure of the Fab fragment of the human HIV-1 neutralizing antibody PGZL1 in complex with its MPER peptide epitope (region 671-683 of HIV-1 gp41) and phosphatidic acid (06:0 PA),HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Irimia, A., Wilson, I.A.",3.416,X-RAY DIFFRACTION,0.265,0.215,False,True,IGHV1,IGKV3,Kappa,,,,,,6o3j_H_L_G,False
7laa,H,L,0,A,protein,,spike glycoprotein,"VIRAL PROTEIN, IMMUNE SYSTEM",01/06/21,Structure of SARS-CoV-2 S protein in complex with Receptor Binding Domain antibody DH1041,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Manne, K., Acharya, P.",3.42,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV1,Lambda,,,,,,7laa_H_L_A,False
3u9u,A,B,0,F,protein,,receptor tyrosine-protein kinase erbb-4,Transferase,10/19/11,Crystal Structure of Extracellular Domain of Human ErbB4/Her4 in complex with the Fab fragment of mAb1479,MUS MUSCULUS; HOMO SAPIENS,mus musculus,mus musculus,homo sapiens,"Hollmen, M., Liu, P., Wildiers, H., Reinvall, I., Vandorpe, T., Smeets, A., Deraedt, K., Vahlberg, T., Joensuu, H., Leahy, D.J., Schoffski, P., Elenius, K.",3.42,X-RAY DIFFRACTION,0.272,0.234,False,True,IGHV8,IGKV1,Kappa,,,,,,3u9u_A_B_F,False
7whz,B,D,0,A,protein,,spike protein s1,VIRAL PROTEIN,01/01/22,SARS-CoV-2 spike protein in complex with three human neutralizing antibodies,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zheng, Q., Li, S., Sun, H., Zheng, Z., Wang, S.",3.42,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7whz_B_D_A,False
7ls9,D,F,0,B,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,02/17/21,Cryo-EM structure of neutralizing antibody 1-57 in complex with prefusion SARS-CoV-2 spike glycoprotein,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Cerutti, G., Shapiro, L.",3.42,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV3,Kappa,,,,,,7ls9_D_F_B,False
7tht,a,c,0,S,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,01/12/22,CryoEM structure of SARS-CoV-2 S protein in complex with Receptor Binding Domain antibody DH1042,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Manne, K., May, A., Acharya, P.",3.42,ELECTRON MICROSCOPY,,,False,False,IGHV1,IGKV1,Kappa,,,,,,7tht_a_c_S,False
7mw5,D,E,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/Immune System,05/15/21,Structure of the SARS-CoV-2 Spike trimer with one RBD down in complex with the Fab fragment of human neutralizing antibody clone 2,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Hu, Y., Xiong, Y.",3.42,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,7mw5_D_E_A,False
7whz,H,L,0,A,protein,,spike protein s1,VIRAL PROTEIN,01/01/22,SARS-CoV-2 spike protein in complex with three human neutralizing antibodies,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zheng, Q., Li, S., Sun, H., Zheng, Z., Wang, S.",3.42,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV1,Lambda,,,,,,7whz_H_L_A,False
6xcm,H,L,0,C,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,06/08/20,Structure of the SARS-CoV-2 spike glycoprotein in complex with the C105 neutralizing antibody Fab fragment (state 1),SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Barnes, C.O., Bjorkman, P.J.",3.42,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV2,Lambda,,,,,,6xcm_H_L_C,False
7whz,C,E,0,A,protein,,spike protein s1,VIRAL PROTEIN,01/01/22,SARS-CoV-2 spike protein in complex with three human neutralizing antibodies,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zheng, Q., Li, S., Sun, H., Zheng, Z., Wang, S.",3.42,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7whz_C_E_A,False
7cn2,K,k,0,C,protein,,major capsid protein l1,IMMUNE SYSTEM/VIRAL PROTEIN,07/29/20,Subparticle refinement of human papillomavirus type 16 pesudovirus in complex with H16.001 Fab,HUMAN PAPILLOMAVIRUS TYPE 16; ORYCTOLAGUS CUNICULUS,oryctolagus cuniculus,oryctolagus cuniculus,human papillomavirus type 16,"He, M.Z., Li, S.W.",3.43,ELECTRON MICROSCOPY,,,False,False,IGHV1,IGKV1,Kappa,,,,,,7cn2_K_k_C,False
6nfc,H,L,0,A,protein,,hiv-1 env bg505 md64 n332-gt5 sosip gp120,VIRAL PROTEIN,12/19/18,BG505 MD64 N332-GT5 SOSIP trimer in complex with BG18-like precursor HMP42 fragmentantigen binding and base-binding RM20A3 fragment antigen binding,MACACA MULATTA; HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Ozorowski, G., Torres, J.L., Ward, A.B.",3.43,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV3,Lambda,,,,,,6nfc_H_L_A,False
9clp,H,L,0,A,protein,,zinc metalloproteinase-disintegrin-like ecarin,HYDROLASE,09/11/24,Structure of ecarin from the venom of Kenyan saw-scaled viper in complex with the Fab of neutralizing antibody H11,Echis carinatus; Homo sapiens,homo sapiens,homo sapiens,echis carinatus,"Mindrebo, J.T., Lander, G.C.",3.43,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV2,Lambda,,,,,,9clp_H_L_A,False
9kvk,C,D,0,G,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,12/10/25,"Cryo-EM structure of SARS-CoV-2 spike protein in complex with three-nAb 8H12, 3E2 and 1C4",Mus musculus; Severe acute respiratory syndrome coronavirus 2,mus musculus,mus musculus,severe acute respiratory syndrome coronavirus2 ,"Sun, H., Jiang, Y., Li, S., Zheng, Q.",3.44,ELECTRON MICROSCOPY,,,False,False,IGHV9,IGKV5,Kappa,,,,,,9kvk_C_D_G,False
9kvk,A,B,0,G,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,12/10/25,"Cryo-EM structure of SARS-CoV-2 spike protein in complex with three-nAb 8H12, 3E2 and 1C4",Mus musculus; Severe acute respiratory syndrome coronavirus 2,mus musculus,mus musculus,severe acute respiratory syndrome coronavirus2 ,"Sun, H., Jiang, Y., Li, S., Zheng, Q.",3.44,ELECTRON MICROSCOPY,,,False,False,IGHV6,IGKV6,Kappa,,,,,,9kvk_A_B_G,False
9kvd,E,G,0,C,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,08/20/25,"Cryo-EM structure of SARS-CoV-2 prototype spike protein in complex with triple-nAb 3G5, 4H5 and 4C11",Macaca mulatta; Severe acute respiratory syndrome coronavirus 2,macaca mulatta,macaca mulatta,severe acute respiratory syndrome coronavirus2 ,"Sun, H., Jiang, Y., Wang, S., Zheng, Z., Li, S., Zheng, Q.",3.44,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV2,Kappa,,,,,,9kvd_E_G_C,False
9kvd,D,F,0,C,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,08/20/25,"Cryo-EM structure of SARS-CoV-2 prototype spike protein in complex with triple-nAb 3G5, 4H5 and 4C11",Macaca mulatta; Severe acute respiratory syndrome coronavirus 2,macaca mulatta,macaca mulatta,severe acute respiratory syndrome coronavirus2 ,"Sun, H., Jiang, Y., Wang, S., Zheng, Z., Li, S., Zheng, Q.",3.44,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGLV1,Lambda,,,,,,9kvd_D_F_C,False
9kvd,A,B,0,C,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,08/20/25,"Cryo-EM structure of SARS-CoV-2 prototype spike protein in complex with triple-nAb 3G5, 4H5 and 4C11",Macaca mulatta; Severe acute respiratory syndrome coronavirus 2,macaca mulatta,macaca mulatta,severe acute respiratory syndrome coronavirus2 ,"Sun, H., Jiang, Y., Wang, S., Zheng, Z., Li, S., Zheng, Q.",3.44,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,9kvd_A_B_C,False
9kvk,H,L,0,G,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,12/10/25,"Cryo-EM structure of SARS-CoV-2 spike protein in complex with three-nAb 8H12, 3E2 and 1C4",Mus musculus; Severe acute respiratory syndrome coronavirus 2,mus musculus,mus musculus,severe acute respiratory syndrome coronavirus2 ,"Sun, H., Jiang, Y., Li, S., Zheng, Q.",3.44,ELECTRON MICROSCOPY,,,False,False,IGHV5,IGKV4,Kappa,,,,,,9kvk_H_L_G,False
9do2,H,L,0,A,protein,,hemagglutinin,VIRAL PROTEIN/Immune System,07/30/25,#1664 Fab in complex with NG2 COBRA hemagglutinin,Homo sapiens; Influenza A virus,homo sapiens,homo sapiens,influenza a virus,"Nagashima, K., Mousa, J.",3.45,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV4,Lambda,,,,,,9do2_H_L_A,False
9cq8,G,H,0,D,protein,,9c2 tcr delta chain,MEMBRANE PROTEIN/IMMUNE SYSTEM,01/15/25,Dimeric 9C2 gamma delta TCR extracellular domain bound by Fab 2,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Hoque, M., Saotome, K., Franklin, M.C.",3.45,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV4,Kappa,,,,,,9cq8_G_H_D,False
8x0x,H,L,0,E,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,06/05/24,Crystal structure of JE-5C in complex with SARS-CoV-2 RBD,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Mohapatra, A., Chen, X.",3.45,X-RAY DIFFRACTION,0.285,0.240,False,True,IGHV3,IGKV1,Kappa,,,,,,8x0x_H_L_E,False
6oej,B,C,0,A,protein,,clade a/e 93th057 hiv-1 gp120 core,IMMUNE SYSTEM,03/27/19,CRYSTAL STRUCTURE OF THE NON-NEUTRALIZING AND ADCC-POTENT ANTIBODY C11 IN COMPLEX WITH HIV-1 CLADE A/E GP120,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Tolbert, W.D., Pazgier, M.",3.45,X-RAY DIFFRACTION,0.284,0.231,False,True,IGHV3,IGKV2,Kappa,,,,,,6oej_B_C_A,False
7jks,H,L,0,G,protein,,hiv-1 gp120 core,IMMUNE SYSTEM,07/28/20,Crystal structure of vaccine-elicited broadly neutralizing VRC01-class antibody 2411a in complex with HIV-1 gp120 core,HUMAN IMMUNODEFICIENCY VIRUS 1; MUS MUSCULUS,mus musculus,mus musculus,human immunodeficiency virus 1,"Zhou, T., Chen, X., Kwong, P.D., Mascola, J.R.",3.45,X-RAY DIFFRACTION,0.332,0.283,False,True,IGHV1,IGKV3,Kappa,,,,,,7jks_H_L_G,False
9xqb,A,B,0,C,protein,,a2a receptor-bril,MEMBRANE PROTEIN,01/07/26,Cryo-EM structure of the human A2A adenosine receptor in complex with a Fab antibody fragment,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Miyashita, Y., Konno, R., Ogasawara, S., Okuda, Y., Takamuku, Y., Moriya, T., Saito, T., Murata, T., Ohara, O., Kawashima, Y.",3.45,ELECTRON MICROSCOPY,,,False,True,IGHV9,IGKV5,Kappa,,,,,,9xqb_A_B_C,False
6xpz,B,C,0,A,protein,,hemagglutinin,VIRAL PROTEIN/IMMUNE SYSTEM,07/09/20,Human antibody S1V2-83 in complex with the influenza hemagglutinin head domain of A/Moscow/10/1999(H3N2),INFLUENZA A VIRUS (A/MOSCOW/10/1999(H3N2)); HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus (a/moscow/10/1999(h3n2)),"McCarthy, K.R., Harrison, S.C.",3.45,X-RAY DIFFRACTION,0.307,0.251,False,True,IGHV3,IGKV1,Kappa,,,,,,6xpz_B_C_A,False
8zdw,F,E,0,C,protein,,hemagglutinin,VIRAL PROTEIN/IMMUNE SYSTEM,09/25/24,The cryoEM structure of H5N1 HA split from symmetric filament in conformation A,Influenza A virus (strain A/Vietnam/1203/2004 H5N1); Mus musculus,mus musculus,mus musculus,influenza a virus (strain a/vietnam/1203/2004h5n1) ,"Li, R., Gao, J., Wang, L., Gui, M., Xiang, Y.",3.45,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,8zdw_F_E_C,False
4ydi,H,L,0,G,protein,,envelope glycoprotein gp160,IMMUNE SYSTEM,02/22/15,"Crystal structure of broad and potently neutralizing VRC01-class antibody Z258-VRC27.01, isolated from human donor Z258, in complex with HIV-1 gp120 from clade A strain Q23.17",HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Zhou, T., Srivatsan, S., Kwong, P.D.",3.452,X-RAY DIFFRACTION,0.276,0.222,False,True,unknown,unknown,unknown,,,,,,4ydi_H_L_G,False
5vgj,H,L,0,G,protein,,1fd6-v1v2-wito,Viral protein/IMMUNE SYSTEM,04/11/17,"Crystal Structure of the Human Fab VRC38.01, an HIV-1 V1V2-Directed Neutralizing Antibody Isolated from Donor N90, bound to a scaffolded WITO V1V2 domain",HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Gorman, J., Li, J., Kwong, P.D.",3.456,X-RAY DIFFRACTION,0.273,0.214,False,True,IGHV3,IGKV2,Kappa,,,,,,5vgj_H_L_G,False
8dp1,E,F,0,B,protein,,envelope glycoprotein gp120,VIRAL PROTEIN/Immune System,01/08/09,Cryo-EM structure of HIV-1 Env(BG505.T332N SOSIP) in complex with DH1030.1 Fab,Human immunodeficiency virus 1; Macaca mulatta,macaca mulatta,macaca mulatta,human immunodeficiency virus 1,"Gobeil, S., Acharya, P.",3.46,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV2,Kappa,,,,,,8dp1_E_F_B,False
9cct,C,B,0,A,protein,,type 1 fimbiral adhesin fimh,CELL ADHESION,07/02/25,CryoEM Structure of Escherichia coli FimCH in complex with B7 Fab,Escherichia coli UTI89; Mus musculus,mus musculus,mus musculus,escherichia coli uti89,"Lopatto, E.D.B., Hultgren, S.J.",3.46,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV4,Kappa,,,,,,9cct_C_B_A,False
8ty1,C,B,0,A,protein,,coagulation factor viii,BLOOD CLOTTING/INHIBITOR,09/13/23,Cryo-EM structure of coagulation factor VIII bound to NB2E9,Homo sapiens; Sus scrofa,homo sapiens,homo sapiens,"sus scrofa, homo sapiens","Childers, K.C., Spiegel, P.C.",3.46,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,8ty1_C_B_A,False
9cql,J,K,0,E,protein,,9c2 tcr delta chain,MEMBRANE PROTEIN,01/15/25,Dimeric 9C2 gamma delta TCR bound by Fab 3,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Hoque, M., Saotome, K., Franklin, M.C.",3.46,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,9cql_J_K_E,False
8xs3,A,B,0,C,protein,,protein opg190,VIRAL PROTEIN/IMMUNE SYSTEM,06/12/24,Structure of MPXV B6 and D68 fab complex,Homo sapiens; Monkeypox virus,homo sapiens,homo sapiens,monkeypox virus,"wu, L.L., Sun, J.Q.",3.46,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV2,Kappa,,,,,,8xs3_A_B_C,False
9lae,A,B,0,G,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,02/12/25,Locally refined region of SARS-CoV-2 spike in complex with antibodies 9G11 and 3E2.,Mus musculus; Severe acute respiratory syndrome coronavirus 2,mus musculus,mus musculus,severe acute respiratory syndrome coronavirus2 ,"Jiang, Y., Sun, H., Zheng, Q., Li, S.",3.46,ELECTRON MICROSCOPY,,,False,False,IGHV1,IGKV6,Kappa,,,,,,9lae_A_B_G,False
7v3l,F,G,0,B,protein,,spike glycoprotein,PROTEIN BINDING,08/17/22,MERS S ectodomain trimer in complex with neutralizing antibody 6516,Homo sapiens; Human betacoronavirus 2c EMC/2012,homo sapiens,homo sapiens,human betacoronavirus 2c emc/2012,"Wang, X., Zhao, J., Wang, Z., Wang, Y., Zeng, J.",3.47,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,7v3l_F_G_B,False
8ghk,M,N,0,B,protein,,hemagglutinin,VIRAL PROTEIN/IMMUNE SYSTEM,06/26/24,CryoEM structure of Influenza A virus A/Melbourner/1/1946 (H1N1) hemagglutinin bound to GS10-X6-BE4 Fab,Homo sapiens; Influenza A virus,homo sapiens,homo sapiens,influenza a virus,Seattle Structural Genomics Center for Infectious Disease (SSGCID),3.47,ELECTRON MICROSCOPY,,,False,True,IGHV10,IGKV10,Kappa,,,,,,8ghk_M_N_B,False
9iy2,E,F,0,B,protein,,secreted protein orf2,IMMUNE SYSTEM,08/28/24,"Immune complex of HEV-E2s, nAb 8C11 and nAb 8H3",Hepatitis E virus (strain Pakistan); Mus sp.,mus sp.,mus sp.,hepatitis e virus (strain pakistan),"Minghua, Z., Lizhi, Z., Ying, G., Shaowei, L.",3.476,X-RAY DIFFRACTION,0.269,0.223,False,False,IGHV2,IGKV8,Kappa,,,,,,9iy2_E_F_B,False
7wk9,a,b,0,B,protein,,light chain of s3h3 fab,VIRAL PROTEIN,01/08/22,SARS-CoV-2 Omicron open state spike protein in complex with S3H3 Fab,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; MUS MUSCULUS,mus musculus,mus musculus,severe acute respiratory syndrome coronavirus2 ,"Hong, Q., Cong, Y.",3.48,ELECTRON MICROSCOPY,,,False,False,IGHV1,IGKV3,Kappa,,,,,,7wk9_a_b_B,False
7wk9,c,d,0,C,protein,,heavy chain of s3h3 fab,VIRAL PROTEIN,01/08/22,SARS-CoV-2 Omicron open state spike protein in complex with S3H3 Fab,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; MUS MUSCULUS,mus musculus,mus musculus,severe acute respiratory syndrome coronavirus2 ,"Hong, Q., Cong, Y.",3.48,ELECTRON MICROSCOPY,,,False,False,IGHV1,IGKV3,Kappa,,,,,,7wk9_c_d_C,False
9jzq,A,B,0,E,protein,,envelope glycoprotein e,VIRAL PROTEIN/IMMUNE SYSTEM,09/03/25,The glycoprotein E of Varicella-Zoster Virus in complex with WLL-1/WLL-28 Fab,Homo sapiens; Varicella-zoster virus (strain Oka vaccine),homo sapiens,homo sapiens,varicella-zoster virus (strain oka vaccine),"Wang, L., Zhang, N., Guo, Y.",3.48,ELECTRON MICROSCOPY,,,False,True,IGHV2,IGLV3,Lambda,,,,,,9jzq_A_B_E,False
9jzq,C,D,0,E,protein,,envelope glycoprotein e,VIRAL PROTEIN/IMMUNE SYSTEM,09/03/25,The glycoprotein E of Varicella-Zoster Virus in complex with WLL-1/WLL-28 Fab,Homo sapiens; Varicella-zoster virus (strain Oka vaccine),homo sapiens,homo sapiens,varicella-zoster virus (strain oka vaccine),"Wang, L., Zhang, N., Guo, Y.",3.48,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGKV3,Kappa,,,,,,9jzq_C_D_E,False
6wty,K,L,0,J,protein,,reticulocyte binding protein 2b,CELL INVASION,05/04/20,Plasmodium vivax reticulocyte binding protein 2b (PvRBP2b) bound to human monoclonal antibody 253245,PLASMODIUM VIVAX (STRAIN SALVADOR I); HOMO SAPIENS,homo sapiens,homo sapiens,plasmodium vivax (strain salvador i),"Chan, L.J., Dietrich, M.H., Tham, W.H.",3.481,X-RAY DIFFRACTION,0.301,0.262,False,True,IGHV1,IGLV2,Lambda,,,,,,6wty_K_L_J,False
6mqm,J,K,0,L,peptide,,hiv env fusion peptide residue 512-519,IMMUNE SYSTEM,10/10/18,Vaccine-elicited NHP FP-targeting neutralizing antibody DF1W-a.01 in complex with HIV fusion peptide (residue 512-519),PLATYRRHINI; SYNTHETIC CONSTRUCT,platyrrhini,platyrrhini,human immunodeficiency virus 1,"Xu, K., Wang, Y., Kwong, P.D.",3.484,X-RAY DIFFRACTION,0.246,0.200,False,True,IGHV4,IGKV2,Kappa,,,,,,6mqm_J_K_L,False
8eed,H,L,0,A,protein,,envelope protein e,VIRAL PROTEIN/IMMUNE SYSTEM,08/30/23,Crystal structure of a NHP anti-ZIKV neutralizing antibody rhMZ107-B in complex with ZIKV E glycoprotein,Macaca mulatta; Zika virus ZIKV/H. sapiens/FrenchPolynesia/10087PF/2013,macaca mulatta,macaca mulatta,zika virus zikv/h.sapiens/frenchpolynesia/10087pf/2013 ,"Sankhala, R.S., Joyce, M.G.",3.487,X-RAY DIFFRACTION,0.331,0.289,False,True,IGHV4,IGLV11,Lambda,,,,,,8eed_H_L_A,False
7cai,E,D,0,A,protein,,spike glycoprotein,VIRAL PROTEIN,06/08/20,SARS-CoV-2 S trimer with two RBDs in the open state and complexed with two H014 Fab,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhe, L., Cao, L., Deng, Y., Sun, Y., Wang, N., Xie, L., Wang, Y., Rao, Z., Qin, C., Wang, X.",3.49,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV6,Kappa,,,,,,7cai_E_D_A,False
7rsn,F,K,0,G,protein,,amc018 gp120,VIRAL PROTEIN/IMMUNE SYSTEM,08/11/21,AMC018 SOSIP.v4.2 in complex with PGV04 Fab,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Cottrell, C.A., Ward, A.B.",3.49,ELECTRON MICROSCOPY,,,False,True,unknown,unknown,unknown,,,,,,7rsn_F_K_G,False
6s8d,P,O,0,C,protein,,envelope glycoprotein,VIRAL PROTEIN,07/09/19,Structure of ZEBOV GP in complex with 1T0227 antibody,HOMO SAPIENS; EBOLA VIRUS,homo sapiens,homo sapiens,ebola virus,"Diskin, R., Cohen-Dvashi, H.",3.49,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV1,Lambda,,,,,,6s8d_P_O_C,False
8zua,J,L,0,K,protein,,entry-fusion complex associated protein opg095,ANTIVIRAL PROTEIN/IMMUNE SYSTEM,04/02/25,The complex structure of MPXV M1R and neutralizing antibody A138,Homo sapiens; Monkeypox virus,homo sapiens,homo sapiens,monkeypox virus,"Ge, J.W.",3.49,X-RAY DIFFRACTION,0.286,0.237,False,True,IGHV3,IGKV1,Kappa,,,,,,8zua_J_L_K,False
9s8w,H,L,0,A,protein,,heparanase,CARBOHYDRATE,09/24/25,Human heparanase in complex with neutralizing antibody A54 Fab fragment,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Wu, L.",3.49,X-RAY DIFFRACTION,0.323,0.220,False,True,IGHV1,IGKV3,Kappa,,,,,,9s8w_H_L_A,False
2qr0,N,M,0,O,protein,,vascular endothelial growth factor a,IMMUNE SYSTEM,07/27/07,Structure of VEGF complexed to a Fab containing TYR and SER in the CDRs,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Wiesmann, C.",3.5,X-RAY DIFFRACTION,0.312,0.291,False,False,IGHV3,IGKV1,Kappa,7.8e-09,-11.5,SPR,37.0,17825836,2qr0_N_M_O,False
8j9k,D,B,0,C,protein,,beta-arrestin-2,SIGNALING PROTEIN/IMMUNE SYSTEM,12/27/23,Structure of basal beta-arrestin2,Mus musculus; Rattus norvegicus,mus musculus,mus musculus,rattus norvegicus,"Maharana, J., Sarma, P., Yadav, M.K., Chami, M., Banerjee, R., Shukla, A.K.",3.5,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8j9k_D_B_C,False
6tys,H,L,0,A,protein,,fusion glycoprotein f0,VIRAL PROTEIN/IMMUNE SYSTEM,08/09/19,A potent cross-neutralizing antibody targeting the fusion glycoprotein inhibits Nipah virus and Hendra virus infection,NIPAH VIRUS; MUS MUSCULUS,mus musculus,mus musculus,nipah virus,"Dang, H.V., Chan, Y.P., Park, Y.J., Snijder, J., Da Silva, S.C., Vu, B., Yan, L., Feng, Y.R., Rockx, B., Geisbert, T., Mire, C.E., Broder, C.B., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)",3.5,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGKV12,Kappa,,,,,,6tys_H_L_A,False
7rw2,I,K,0,C,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,08/19/21,Cryo-EM structure of NTD-directed neutralizing antibody 5-7 in complex with prefusion SARS-CoV-2 spike glycoprotein,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Cerutti, G., Shapiro, L.",3.5,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,7rw2_I_K_C,False
6um7,F,G,0,E,protein,,envelope glycoprotein gp120,VIRAL PROTEIN/immune system,10/09/19,Cryo-EM structure of vaccine-elicited HIV-1 neutralizing antibody DH270.mu1 in complex with CH848 10.17DT Env,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Acharya, P., Henderson, R.C., Saunders, K., Haynes, B.F.",3.5,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV2,Lambda,,,,,,6um7_F_G_E,False
6s3t,D,C,0,S,protein,,46 kda surface antigen,PROTEIN BINDING,06/26/19,"P46, an immunodominant surface protein from Mycoplasma hyopneumoniae",MYCOPLASMA HYOPNEUMONIAE J; MUS MUSCULUS,mus musculus,mus musculus,mycoplasma hyopneumoniae j,"Guasch, A., Fita, I.",3.5,X-RAY DIFFRACTION,unknown,unknown,False,True,IGHV3,IGKV3,Kappa,,,,,,6s3t_D_C_S,False
4yzf,E,F,0,A,protein,,band 3 anion transport protein,IMMUNE SYSTEM,03/25/15,Crystal structure of the anion exchanger domain of human erythrocyte Band 3,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Alguel, Y., Arakawa, T., Yugiri, T.K., Iwanari, H., Hatae, H., Iwata, M., Abe, Y., Hino, T., Suno, C.I., Kuma, H., Kang, D., Murata, T., Hamakubo, T., Cameron, A.D., Kobayashi, T., Hamasaki, N., Iwata, S.",3.5,X-RAY DIFFRACTION,0.290,0.274,False,False,IGHV8,IGKV3,Kappa,,,,,,4yzf_E_F_A,False
7cyp,E,D,0,A,protein,,sars-cov-2 spike glycoprotein,VIRAL PROTEIN,09/04/20,Complex of SARS-CoV-2 spike trimer with its neutralizing antibody HB27,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Wang, X., Zhu, L.",3.5,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGKV3,Kappa,,,,,,7cyp_E_D_A,False
8awm,H,L,0,A,protein,,glycoprotein,VIRAL PROTEIN,09/06/23,RVFV GnH with Fab268 bound,Homo sapiens; Rift Valley fever virus,homo sapiens,homo sapiens,rift valley fever virus,"Hulswit, R.J.G., Bowden, T.A., Stass, R.",3.5,X-RAY DIFFRACTION,0.279,0.247,False,True,IGHV3,IGLV3,Lambda,,,,,,8awm_H_L_A,False
7kqh,H,L,0,B,protein,,hemagglutinin,IMMUNE SYSTEM/VIRAL PROTEIN,11/16/20,Antibodies that engage the hemagglutinin receptor-binding site of influenza B viruses,INFLUENZA B VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,influenza b virus,"Bajic, G., Harrison, S.C.",3.5,X-RAY DIFFRACTION,0.300,0.252,False,True,IGHV3,IGKV1,Kappa,,,,,,7kqh_H_L_B,False
6dc5,E,F,0,D,protein,,rsv fusion glycoprotein,IMMUNE SYSTEM,05/04/18,RSV prefusion F in complex with AM22 Fab,HUMAN RESPIRATORY SYNCYTIAL VIRUS A (STRAIN A2); HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,"human respiratory syncytial virus a (straina2), human immunodeficiency virus 1 ","Jones, H.G., McLellan, J.S.",3.5,X-RAY DIFFRACTION,0.280,0.217,False,True,IGHV1,IGKV3,Kappa,,,,,,6dc5_E_F_D,False
7mep,I,G,0,E,protein,,bg505 sosipv5.2(7s) - gp120,VIRAL PROTEIN,04/07/21,BG505 SOSIP.v5.2(7S) in complex with the monoclonal antibodies Rh.33172 mAb.1 and RM19R,MACACA MULATTA; HUMAN IMMUNODEFICIENCY VIRUS,macaca mulatta,macaca mulatta,human immunodeficiency virus,"Antanasijevic, A., Ward, A.B.",3.5,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV3,Kappa,,,,,,7mep_I_G_E,False
6mlm,K,L,0,H,protein,,hemagglutinin ha1 chain,VIRAL PROTEIN/Immune System,09/27/18,H7 HA0 in complex with Fv from H7.5 IgG,INFLUENZA A VIRUS (A/NEW YORK/107/2003(H7N2)); INFLUENZA A VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus (a/new york/107/2003(h7n2)),"Pallesen, J., Turner, H.L., Ward, A.B.",3.5,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,6mlm_K_L_H,False
6opo,I,E,0,D,protein,,envelope glycoprotein gp160,VIRAL PROTEIN/Immune System,04/25/19,Symmetric model of CD4- and 17-bound B41 HIV-1 Env SOSIP in complex with DDM,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Ozorowski, G., Torres, J.L., Ward, A.B.",3.5,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,6opo_I_E_D,False
7te1,C,F,0,E,protein,,spike protein s1,IMMUNE SYSTEM/Viral Protein,01/03/22,SARS-CoV-2 Receptor Binding Domain in Complex with Ab17,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Hauser, B.M., Schmidt, A.G.",3.5,X-RAY DIFFRACTION,0.344,0.297,False,True,IGHV1,IGKV14,Kappa,,,,,,7te1_C_F_E,False
8vdf,H,L,0,A,protein,,erythrocyte membrane protein 1,IMMUNE SYSTEM,10/02/24,Cryo-EM structure of human monoclonal antibody C7 targeting IT4VAR22 CIDRa1.7 (PfEMP1 A),Homo sapiens; Plasmodium falciparum,homo sapiens,homo sapiens,plasmodium falciparum,"Raghavan, S.S.R., Ward, A.B.",3.5,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV3,Lambda,,,,,,8vdf_H_L_A,False
7ej5,I,M,0,B,protein,,spike glycoprotein,VIRAL PROTEIN,04/01/21,Cryo-EM structure of SARS-CoV-2 spike in complex with a neutralizing antibody RBD-chAb-45,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Yang, T.J., Yu, P.Y., Wu, H.C., Hsu, S.T.D.",3.5,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV6,Kappa,,,,,,7ej5_I_M_B,False
8smi,H,L,0,A,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,12/13/23,Crystal structure of antibody WRAIR-2123 in complex with SARS-CoV-2 receptor binding domain,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Sankhala, R.S., Jensen, J.L., Joyce, M.G.",3.5,X-RAY DIFFRACTION,0.295,0.242,False,True,IGHV3,IGKV1,Kappa,,,,,,8smi_H_L_A,False
7kdd,F,G,0,B,protein,,envelope glycoprotein b,VIRAL PROTEIN/IMMUNE SYSTEM,10/08/20,HCMV postfusion gB in complex with SM5-1 Fab,HOMO SAPIENS; HUMAN CYTOMEGALOVIRUS (STRAIN TOWNE),homo sapiens,homo sapiens,human cytomegalovirus (strain towne),"Liu, Y., Heim, P.K., Che, Y., Chi, X., Qiu, X., Han, S., Dormitzer, P.R., Yang, X.",3.5,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV1,Lambda,,,,,,7kdd_F_G_B,False
6ot1,A,C,0,O,protein,,envelope glycoprotein gp41,IMMUNE SYSTEM,05/02/19,Cryo-EM structure of vaccine-elicited antibody 0PV-b.01 in complex with HIV-1 Env BG505 DS-SOSIP and antibodies VRC03 and PGT122,HUMAN IMMUNODEFICIENCY VIRUS 1; MACACA MULATTA; HOMO SAPIENS,macaca mulatta,macaca mulatta,human immunodeficiency virus 1,"Gorman, J., Kwong, P.D.",3.5,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV2,Kappa,,,,,,6ot1_A_C_O,False
7k8z,M,N,0,C,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,09/27/20,"Structure of the SARS-CoV-2 S 2P trimer in complex with the human neutralizing antibody Fab fragment, C135",SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Barnes, C.O., Bjorkman, P.J.",3.5,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7k8z_M_N_C,False
7r8o,M,N,0,E,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,06/26/21,Structure of the SARS-CoV-2 S 6P trimer in complex with neutralizing antibody C548,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"DeLaitsch, A.T., Barnes, C.O., Bjorkman, P.J.",3.5,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV9,Lambda,,,,,,7r8o_M_N_E,False
8uwz,A,B,0,E,protein,,"isoform vegf121 of vascular endothelial growth factor a,long form ",SIGNALING PROTEIN,11/13/24,The structure of Raamsizumab in complex with VEGF121,Homo sapiens; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,homo sapiens,"Singer, A.U., Bruce, H., Blazer, L., Sicheri, F., Adams, J.J., Sidhu, S.S.",3.5,X-RAY DIFFRACTION,0.298,0.237,False,True,IGHV3,IGKV1,Kappa,,,,,,8uwz_A_B_E,False
6z06,H,L,0,A,protein,,envelope polyprotein,VIRAL PROTEIN,05/07/20,Crystal structure of Puumala virus Gc in complex with Fab 4G2,MYODES GLAREOLUS; PUUMALA ORTHOHANTAVIRUS,myodes glareolus,myodes glareolus,puumala orthohantavirus,"Rissanen, I.R., Stass, R., Krumm, S.A., Seow, J., Hulswit, R.J.G., Paesen, G.C., Hepojoki, J., Vapalahti, O., Lundkvist, A., Reynard, O., Volchkov, V., Doores, K.J., Huiskonen, J.T., Bowden, T.A.",3.5,X-RAY DIFFRACTION,0.264,0.217,False,True,IGHV5,unknown,unknown,,,,,,6z06_H_L_A,False
3wsq,H,L,0,A,protein,,receptor tyrosine-protein kinase erbb-2,TRANSFERASE/IMMUNE SYSTEM,03/20/14,Structure of HER2 with an Fab,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Fu, W.Y., Wang, Y.X., Zhou, L.J.",3.5,X-RAY DIFFRACTION,0.258,0.221,False,True,IGHV1,IGLV1,Lambda,,,,,,3wsq_H_L_A,False
7zrc,F,G,0,B,protein,,"spike glycoprotein,fibritin",STRUCTURAL PROTEIN,05/04/22,OMI-38 FAB IN COMPLEX WITH SARS-COV-2 BETA SPIKE,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; ENTEROBACTERIA PHAGE T4; HOMO SAPIENS,homo sapiens,homo sapiens,"severe acute respiratory syndrome coronavirus2, enterobacteria phage t4 ","Duyvesteyn, H.M.E., Ren, J., Stuart, D.I.",3.5,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,7zrc_F_G_B,False
8rvn,H,L,0,F,protein,,fusion glycoprotein f0,VIRAL PROTEIN,09/04/24,Nipah virus (NiV) fusion protein in complex with neutralizing Fab92,Henipavirus nipahense; Oryctolagus cuniculus,oryctolagus cuniculus,oryctolagus cuniculus,henipavirus nipahense,"Avanzato, V.A., Stass, R., Duyvesteyn, H.M.E., Bowden, T.A.",3.5,ELECTRON MICROSCOPY,,,False,False,IGHV1,IGKV1,Kappa,,,,,,8rvn_H_L_F,False
6aj9,D,E,0,A,protein,,capsid protein vp1,VIRUS,08/27/18,The structure of Enterovirus D68 mature virion in complex with Fab 15C5 and 11G1,MUS MUSCULUS; ENTEROVIRUS D68,mus musculus,mus musculus,enterovirus d68,"Zheng, Q.B., Zhu, R., Xu, L.F., He, M.Z., Yan, X.D., Cheng, T., Li, S.W.",3.5,ELECTRON MICROSCOPY,,,False,False,IGHV1,IGKV8,Kappa,,,,,,6aj9_D_E_A,False
7p40,I,H,0,G,protein,,spike glycoprotein,VIRAL PROTEIN,07/09/21,P5C3 is a potent fab neutralizer,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"perez, L.",3.5,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,7p40_I_H_G,False
8fz2,H,L,0,P,peptide,,lys-asp-leu-leu-glu-leu-asp-lys-trp-ala-ser-leu-trp-asn-trp-phe-asp-ile-thr-asn ,IMMUNE SYSTEM,10/11/23,Crystal structure of Fab460 in complex with MPER peptide,Mus musculus; SYNTHETIC CONSTRUCT,mus musculus,mus musculus,homo sapiens,"Tan, K., Kim, M., Reinherz, E.L.",3.5,X-RAY DIFFRACTION,0.310,0.262,False,True,IGHV14,IGKV4,Kappa,,,,,,8fz2_H_L_P,False
6n5b,H,L,0,B,protein,,hemagglutinin,VIRAL PROTEIN/IMMUNE SYSTEM,11/21/18,Broadly protective antibodies directed to a subdominant influenza hemagglutinin epitope,MUS MUSCULUS; INFLUENZA A VIRUS,mus musculus,mus musculus,influenza a virus,"Bajic, G., Maron, M.J., Schmidt, A.G.",3.5,X-RAY DIFFRACTION,0.278,0.236,False,True,IGHV5,IGLV1,Lambda,,,,,,6n5b_H_L_B,False
7uar,D,E,0,A,protein,,spike glycoprotein,VIRAL PROTEIN,03/13/22,"Structure of the SARS-CoV-2 S 6P trimer in complex with the neutralizing antibody Fab fragment, C1717",SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Barnes, C.O.",3.5,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV1,Lambda,,,,,,7uar_D_E_A,False
7ucg,N,O,0,P,protein,,envelope glycoprotein gp160,VIRAL PROTEIN/IMMUNE SYSTEM,08/17/22,Structure of the BG505 SOSIP.664 trimer in complex with neutralizing antibody Fab fragments 10-1074 and BG24,Homo sapiens; Human immunodeficiency virus 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Barnes, C.O., Bjorkman, P.J.",3.5,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV2,Lambda,,,,,,7ucg_N_O_P,False
1ken,H,L,0,A,protein,,hemagglutinin ha1,Viral protein/Immune system,11/16/01,INFLUENZA VIRUS HEMAGGLUTININ COMPLEXED WITH AN ANTIBODY THAT PREVENTS THE HEMAGGLUTININ LOW PH FUSOGENIC TRANSITION,INFLUENZA A VIRUS (A/X-31(H3N2)); MUS MUSCULUS,mus musculus,mus musculus,influenza a virus (a/x-31(h3n2)),"Barbey-Martin, C., Gigant, B., Bizebard, T., Calder, L.J., Wharto, S.A., Skehel, J.J., Knossow, M.",3.5,X-RAY DIFFRACTION,0.323,0.255,False,False,IGHV3,IGKV4,Kappa,,,,,,1ken_H_L_A,False
7mep,H,L,0,A,protein,,bg505 sosipv5.2(7s) - gp120,VIRAL PROTEIN,04/07/21,BG505 SOSIP.v5.2(7S) in complex with the monoclonal antibodies Rh.33172 mAb.1 and RM19R,MACACA MULATTA; HUMAN IMMUNODEFICIENCY VIRUS,macaca mulatta,macaca mulatta,human immunodeficiency virus,"Antanasijevic, A., Ward, A.B.",3.5,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,7mep_H_L_A,False
9o54,D,C,0,A,protein,,disintegrin and metalloproteinase domain-containing protein17 ,IMMUNE SYSTEM,06/25/25,ADAM17 Prodomain-Metalloproteinase Domains bound to MEDI3622 Fab,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Slone, C.E., Maciag, J.J.",3.5,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,9o54_D_C_A,False
9bhh,T,S,0,H,protein,,e2 glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,10/22/25,Cryo-EM structure of Chikungunya virus asymmetric unit with Fab IM-CKV063,Chikungunya virus; Mus musculus,mus musculus,mus musculus,chikungunya virus,"Su, G.C., Galaz-Montoya, J.G., Pintilie, G., Jin, J., Chiu, W.",3.5,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,9bhh_T_S_H,False
9log,B,C,0,A,protein,,envelopment polyprotein,VIRAL PROTEIN/IMMUNE SYSTEM,01/28/26,Cryo-EM structure of SFTSV Gn in complex with ZS01S-65,Homo sapiens; Severe fever with thrombocytopenia syndrome virus,homo sapiens,homo sapiens,severe fever with thrombocytopenia syndromevirus ,"Bi, J.H., Zhang, Y.Y., Zhou, Q., Li, D.P.",3.5,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV1,Lambda,,,,,,9log_B_C_A,False
7t82,D,C,0,A,protein,,leukocidin e,TOXIN,01/11/23,Crystal Structure of LEUKOCIDIN E/CENTYRIN S26/FAB B438,,mus musculus,mus musculus,staphylococcaceae,"Luo, J., Malia, T.J., Buckley, P.T.",3.5,X-RAY DIFFRACTION,0.279,0.229,False,True,IGHV1,IGKV1,Kappa,,,,,,7t82_D_C_A,False
5t3z,D,E,0,G,protein,,envelope glycoprotein gp160,VIRAL PROTEIN/IMMUNE SYSTEM,08/26/16,3.5 Angstrom Crystal Structure of a Fully and Natively Glycosylated BG505 SOSIP.664 HIV-1 Env Trimer in Complex with the Broadly Neutralizing Antibodies IOMA and 10-1074,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Gristick, H.B., Bjorkman, P.J.",3.5,X-RAY DIFFRACTION,0.298,0.275,False,True,IGHV1,IGLV2,Lambda,,,,,,5t3z_D_E_G,False
7ty0,K,O,0,C,protein,,glycoprotein g,VIRAL PROTEIN,03/09/22,Nipah Virus attachment (G) glycoprotein ectodomain in complex with nAH1.3 neutralizing antibody Fab fragment (local refinement of the stalk region),Mus sp.; Nipah henipavirus,mus sp.,mus sp.,nipah henipavirus,"Wang, Z.Q., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler, D.",3.5,ELECTRON MICROSCOPY,,,False,True,IGHV6,IGKV3,Kappa,,,,,,7ty0_K_O_C,False
7ty0,J,N,0,D,protein,,glycoprotein g,VIRAL PROTEIN,03/09/22,Nipah Virus attachment (G) glycoprotein ectodomain in complex with nAH1.3 neutralizing antibody Fab fragment (local refinement of the stalk region),Mus sp.; Nipah henipavirus,mus sp.,mus sp.,nipah henipavirus,"Wang, Z.Q., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler, D.",3.5,ELECTRON MICROSCOPY,,,False,True,IGHV6,IGKV3,Kappa,,,,,,7ty0_J_N_D,False
6nb3,H,L,0,C,protein,,spike glycoprotein,VIRUS,12/06/18,MERS-CoV complex with human neutralizing LCA60 antibody Fab fragment (state 1),MIDDLE EAST RESPIRATORY SYNDROME-RELATED CORONAVIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,middle east respiratory syndrome-relatedcoronavirus ,"Walls, A.C., Xiong, X., Park, Y.J., Tortorici, M.A., Snijder, S., Quispe, J., Cameroni, E., Gopal, R., Mian, D., Lanzavecchia, A., Zambon, M., Rey, F.A., Corti, D., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)",3.5,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV2,Lambda,,,,,,6nb3_H_L_C,False
5vl7,H,L,0,B,protein,,proprotein convertase subtilisin/kexin type 9,HYDROLASE,04/25/17,PCSK9 complex with Fab33,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Eigenbrot, C., Shia, S.",3.5,X-RAY DIFFRACTION,0.245,0.199,False,True,IGHV3,IGKV1,Kappa,,,,,,5vl7_H_L_B,False
7nks,H,L,0,A,protein,,envelope polyprotein,VIRAL PROTEIN,02/18/21,Structure of the Hantaan virus Gn glycoprotein ectodomain in complex with Fab HTN-Gn1,HANTAAN ORTHOHANTAVIRUS; ORYCTOLAGUS CUNICULUS,oryctolagus cuniculus,oryctolagus cuniculus,hantaan orthohantavirus,"Rissanen, I., Bowden, T.A., Huiskonen, J.T., Stass, R.",3.5,X-RAY DIFFRACTION,0.274,0.224,False,True,IGHV1,IGKV1,Kappa,,,,,,7nks_H_L_A,False
8w9j,H,L,0,C,protein,,c-type lectin domain family 12 member a,IMMUNE SYSTEM,03/06/24,Crystal structure of human CLEC12A ectodomain complexed with 50C1 Fab,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Mori, S., Nagae, M., Yamasaki, S.",3.5,X-RAY DIFFRACTION,0.291,0.254,False,False,IGHV1,IGKV3,Kappa,,,,,,8w9j_H_L_C,False
7o9w,C,B,0,A,protein,,multidrug resistance protein 1,TRANSPORT PROTEIN,04/17/21,Encequidar-bound human P-glycoprotein in complex with UIC2-Fab,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Nosol, K., Locher, K.P.",3.5,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,7o9w_C_B_A,False
9fns,E,F,0,B,protein,,secreted protein orf2,VIRAL PROTEIN,05/14/25,Cryo-EM structure of the P domain of the Hepatitis E Virus ORF2 protein in complex with Fab ES1.327,Hepatitis E virus; Homo sapiens,homo sapiens,homo sapiens,hepatitis e virus,"Baquero, E., Molinos, L., Mouquet, H.",3.5,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,9fns_E_F_B,False
8t4b,O,Q,0,E,protein,,md65 n332-gt5 sosip gp120,VIRAL PROTEIN/Immune System,01/08/09,MD65 N332-GT5 SOSIP in complex with RM_N332_32 Fab and RM20A3,Human immunodeficiency virus 1; Macaca mulatta,macaca mulatta,macaca mulatta,human immunodeficiency virus 1,"Ozorowski, G., Torres, J.L., Ward, A.B.",3.5,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV1,Kappa,,,,,,8t4b_O_Q_E,False
8zh7,B,C,0,A,protein,,"glutamate receptor ionotropic, nmda 1",MEMBRANE PROTEIN,05/14/25,Crystal structure of N-terminal domain of N-methyl-D-aspartate receptor subunit NR1 in complex with patient-derived antibody,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Nomura, N., Kumazaki, K., Amano, Y.",3.5,X-RAY DIFFRACTION,0.227,0.186,False,True,IGHV4,IGLV6,Lambda,,,,,,8zh7_B_C_A,False
9fnt,E,F,0,B,protein,,secreted protein orf2,VIRAL PROTEIN,05/14/25,Cryo-EM structure of the P domain of the Hepatitis E Virus ORF2 protein in complex with Fab ES4.431,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Baquero, E., Molinos, L., Mouquet, H.",3.5,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,9fnt_E_F_B,False
7te1,H,L,0,D,protein,,spike protein s1,IMMUNE SYSTEM/Viral Protein,01/03/22,SARS-CoV-2 Receptor Binding Domain in Complex with Ab17,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Hauser, B.M., Schmidt, A.G.",3.5,X-RAY DIFFRACTION,0.344,0.297,False,True,IGHV1,IGKV14,Kappa,,,,,,7te1_H_L_D,False
9oom,J,N,0,f,protein,,unknown,VIRAL PROTEIN,11/12/25,Cryo-EM structure of vaccine-elicited antibody T6_P_H03 in complex with HIV Env trimer Q23-APEX-GT1,Human immunodeficiency virus type 1; Mus musculus,mus musculus,mus musculus,human immunodeficiency virus type 1,"Roark, R.S., Shapiro, L.S., Kwong, P.D.",3.5,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,9oom_J_N_f,False
7y6l,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN,06/21/23,The SARS-CoV-2 receptor binding domain bound with the Fab fragment of a human neutralizing antibody Ab816,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Uchikubo, T., Shirouzu, M.",3.5,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGKV1,Kappa,,,,,,7y6l_H_L_A,False
5tlj,D,C,0,X,protein,,cd27 antigen,IMMUNE SYSTEM,10/11/16,COMPLEX BETWEEN HUMAN CD27 AND FAB FRAGMENTS OF ANTIBODIES M2177 AND M2191,"HOMO SAPIENS; MUS MUSCULUS, HOMO SAPIENS","mus musculus, homo sapiens","mus musculus, homo sapiens",homo sapiens,"Teplyakov, A., Obmolova, G., Malia, T., Gilliland, G.L.",3.5,X-RAY DIFFRACTION,0.356,0.283,False,True,IGHV5,IGKV3,Kappa,,,,,,5tlj_D_C_X,False
8qq0,E,D,0,A,protein,,"spike glycoprotein,fibritin",VIRAL PROTEIN,01/31/24,SARS-CoV-2 S protein bound to neutralising antibody UZGENT_A3,Enterobacteria phage T4; Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,"severe acute respiratory syndrome coronavirus2, enterobacteria phage t4 ","Remaut, H., Reiter, D., Vandenkerckhove, L., Acar, D.D., Witkowski, W., Gerlo, S.",3.5,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV2,Lambda,,,,,,8qq0_E_D_A,False
9ml6,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,06/04/25,Structure of the SARS-CoV-2 Spike 6P in complex with the rabbit M8b-C9 Fab,Oryctolagus cuniculus; Severe acute respiratory syndrome coronavirus 2,oryctolagus cuniculus,oryctolagus cuniculus,severe acute respiratory syndrome coronavirus2 ,"Fan, C., Bjorkman, P.J.",3.5,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,9ml6_H_L_A,False
4m1c,C,D,0,A,protein,,insulin-degrading enzyme,HYDROLASE,08/02/13,Crystal Structure Analysis of Fab-Bound Human Insulin Degrading Enzyme (IDE) in Complex with Amyloid-Beta (1-40),HOMO SAPIENS; SYNTHETIC CONSTRUCT,synthetic construct,synthetic construct,homo sapiens,"McCord, L.M., Liang, W., Farcasanu, M., Scherpelz, K., Meredith, S.C., Koide, S., Tang, W.J.",3.5007,X-RAY DIFFRACTION,0.270,0.228,False,True,IGHV3,IGKV1,Kappa,,,,,,4m1c_C_D_A,False
4m1c,E,F,0,B,protein,,insulin-degrading enzyme,HYDROLASE,08/02/13,Crystal Structure Analysis of Fab-Bound Human Insulin Degrading Enzyme (IDE) in Complex with Amyloid-Beta (1-40),HOMO SAPIENS; SYNTHETIC CONSTRUCT,synthetic construct,synthetic construct,homo sapiens,"McCord, L.M., Liang, W., Farcasanu, M., Scherpelz, K., Meredith, S.C., Koide, S., Tang, W.J.",3.5007,X-RAY DIFFRACTION,0.270,0.228,False,True,IGHV3,IGKV1,Kappa,,,,,,4m1c_E_F_B,False
6dc3,H,L,0,F,protein,,rsv fusion glycoprotein,IMMUNE SYSTEM,05/04/18,RSV prefusion F bound to RSD5 Fab,HOMO SAPIENS; HUMAN RESPIRATORY SYNCYTIAL VIRUS A (STRAIN A2); HUMAN IMMUNODEFICIENCY VIRUS 1; UNIDENTIFIED,homo sapiens,homo sapiens,"human respiratory syncytial virus a (straina2), human immunodeficiency virus 1, unidentified ","Battles, M.B., McLellan, J.S., Jones, H.J.",3.501,X-RAY DIFFRACTION,0.205,0.183,False,True,IGHV3,IGLV2,Lambda,,,,,,6dc3_H_L_F,False
5xbm,E,D,0,F,protein,,lysosome membrane protein 2,IMMUNE SYSTEM/PROTEIN BINDING,03/20/17,Structure of SCARB2-JL2 complex,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Zhang, X., Yang, P., Wang, N., Zhang, J., Li, J., Guo, H., Yin, X., Rao, Z., Wang, X., Zhang, L.",3.501,X-RAY DIFFRACTION,0.293,0.238,False,False,IGHV1,IGKV5,Kappa,,,,,,5xbm_E_D_F,False
5c8j,G,H,0,K,protein,,protein mj0480,MEMBRANE PROTEIN,06/25/15,A YidC-like protein in the archaeal plasma membrane,HOMO SAPIENS; METHANOCALDOCOCCUS JANNASCHII (STRAIN ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440),homo sapiens,homo sapiens,methanocaldococcus jannaschii (strain atcc43067 / dsm 2661 / jal-1 / jcm 10045 / nbrc 100440) ,"Borowska, M.T., Dominik, P.K., Anghel, S.A., Kossiakoff, A.A., Keenan, R.J.",3.502,X-RAY DIFFRACTION,0.302,0.253,False,True,IGHV3,IGKV1,Kappa,,,,,,5c8j_G_H_K,False
8zhg,H,L,0,C,protein,,"spike glycoprotein,fibritin,expression tag",VIRAL PROTEIN/IMMUNE SYSTEM,08/21/24,"SARS-CoV-2 spike trimer (6P) in complex with R1-26 Fab, focused refinement of RBD-Fab region",Enterobacteria phage T6; Homo sapiens; Severe acute respiratory syndrome coronavirus 2; synthetic construct,homo sapiens,homo sapiens,"severe acute respiratory syndrome coronavirus2, enterobacteria phage t6, synthetic construct ","Yan, Q., Gao, X., Liu, B., Hou, R., He, P., Li, Z., Chen, Q., Wang, J., He, J., Chen, L., Zhao, J., Xiong, X.",3.51,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV6,Lambda,,,,,,8zhg_H_L_C,False
8zgu,H,L,0,A,protein,,envelopment polyprotein,VIRAL PROTEIN/IMMUNE SYSTEM,07/24/24,Crystal structural of HTNV Gn and AH100 Fab,Homo sapiens; Orthohantavirus hantanense,homo sapiens,homo sapiens,orthohantavirus hantanense,"Wang, F.R., Wu, Y., Gao, F.",3.51,X-RAY DIFFRACTION,0.295,0.253,False,True,IGHV4,IGLV1,Lambda,,,,,,8zgu_H_L_A,False
9z3q,B,A,0,E,protein,,envelope glycoprotein h,IMMUNE SYSTEM,12/10/25,Cryo-EM structure of KSHV glycoprotein gHgL in complex with MLKH3 and MLKH10 FABs,Human gammaherpesvirus 8; Mus musculus,mus musculus,mus musculus,human gammaherpesvirus 8,"Lang, K., Aldridge, N., Pancera, M.",3.51,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV4,Kappa,,,,,,9z3q_B_A_E,False
9z3q,D,C,0,E,protein,,envelope glycoprotein h,IMMUNE SYSTEM,12/10/25,Cryo-EM structure of KSHV glycoprotein gHgL in complex with MLKH3 and MLKH10 FABs,Human gammaherpesvirus 8; Mus musculus,mus musculus,mus musculus,human gammaherpesvirus 8,"Lang, K., Aldridge, N., Pancera, M.",3.51,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,9z3q_D_C_E,False
4r4f,H,L,0,A,protein,,hiv-1 env gp120,VIRAL PROTEIN/IMMUNE SYSTEM/INHIBITOR,08/19/14,"Crystal structure of non-neutralizing, A32-like antibody 2.2c in complex with HIV-1 YU2 gp120",HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Acharya, P., Kwong, P.D.",3.514,X-RAY DIFFRACTION,0.295,0.251,False,True,IGHV4,IGKV1,Kappa,,,,,,4r4f_H_L_A,False
5kaq,H,L,0,B,protein,,hemagglutinin,IMMUNE SYSTEM,06/01/16,Crystal structure of broadly neutralizing Influenza A antibody 31.a.83 in complex with Hemagglutinin Hong Kong 1968.,INFLUENZA A VIRUS (A/HONG KONG/1-4-MA21-1/1968(H3N2)),influenza a virus (a/hong kong/1-4-ma21-1/1968(h3n2)) ,influenza a virus (a/hong kong/1-4-ma21-1/1968(h3n2)) ,influenza a virus (a/hong kong/1-4-ma21-1/1968(h3n2)) ,"Joyce, M.G., Thomas, P.V., Wheatley, A.K., McDermott, A.B., Mascola, J.R., Kwong, P.D.",3.514,X-RAY DIFFRACTION,0.313,0.270,False,True,IGHV3,IGKV3,Kappa,,,,,,5kaq_H_L_B,False
6vo0,G,J,0,C,protein,,envelope glycoprotein gp120,VIRAL PROTEIN,01/29/20,BG505 SOSIP.v5.2 in complex with rabbit Fab 43A2,ORYCTOLAGUS CUNICULUS; HUMAN IMMUNODEFICIENCY VIRUS 1,oryctolagus cuniculus,oryctolagus cuniculus,human immunodeficiency virus 1,"Nogal, B., Cottrell, C.A., Ward, A.B.",3.52,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,6vo0_G_J_C,False
8cbd,A,B,0,X,protein,,spike protein s1,VIRAL PROTEIN,02/07/24,SARS-CoV-2 Delta-RBD complexed with BA.4/5-1 and EY6A Fabs,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, D., Ren, J., Stuart, D.I.",3.52,X-RAY DIFFRACTION,0.266,0.218,False,True,IGHV4,IGKV1,Kappa,,,,,,8cbd_A_B_X,False
3ulu,H,L,0,A,protein,,toll-like receptor 3,IMMUNE SYSTEM,11/11/11,Structure of quaternary complex of human TLR3ecd with three Fabs (Form1),HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Luo, J., Gilliland, G.L., Obmolova, O., Malia, T., Teplyakov, A.",3.52,X-RAY DIFFRACTION,0.309,0.268,False,True,IGHV5,IGKV1,Kappa,,,,,,3ulu_H_L_A,False
8ukh,K,O,0,D,protein,,cell traversal protein for ookinetes and sporozoites,CELL INVASION,09/11/24,Crystal structure of Plasmodium falciparum CelTOS in complex with antibody 4h12,Mus musculus; Plasmodium falciparum 3D7,mus musculus,mus musculus,plasmodium falciparum 3d7,"Tang, W.K., Tolia, N.H., Urusova, D.",3.52,X-RAY DIFFRACTION,0.294,0.268,False,True,IGHV1,IGKV6,Kappa,,,,,,8ukh_K_O_D,False
7yp2,H,L,0,A,protein,,envelope glycoprotein h,VIRAL PROTEIN,01/31/24,Cryo-EM structure of EBV gHgL-gp42 in complex with mAb 6H2 (localized refinement),Human gammaherpesvirus 4; Mus musculus,mus musculus,mus musculus,human gammaherpesvirus 4,"Liu, L., Sun, H., Jiang, Y., Hong, J., Zheng, Q., Li, S., Chen, Y., Xia, N.",3.52,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV8,Kappa,,,,,,7yp2_H_L_A,False
3ulu,F,E,0,A,protein,,toll-like receptor 3,IMMUNE SYSTEM,11/11/11,Structure of quaternary complex of human TLR3ecd with three Fabs (Form1),HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Luo, J., Gilliland, G.L., Obmolova, O., Malia, T., Teplyakov, A.",3.52,X-RAY DIFFRACTION,0.309,0.268,False,True,IGHV1,IGKV12,Kappa,,,,,,3ulu_F_E_A,False
3ulu,D,C,0,A,protein,,toll-like receptor 3,IMMUNE SYSTEM,11/11/11,Structure of quaternary complex of human TLR3ecd with three Fabs (Form1),HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Luo, J., Gilliland, G.L., Obmolova, O., Malia, T., Teplyakov, A.",3.52,X-RAY DIFFRACTION,0.309,0.268,False,True,IGHV6,IGLV3,Lambda,,,,,,3ulu_D_C_A,False
8xk8,C,D,0,B,protein,,envelopment polyprotein,VIRAL PROTEIN,07/10/24,N1D10 Fab bound to SFTSV glycoprotein-Gn,Mus musculus; Severe fever with thrombocytopenia syndrome virus,mus musculus,mus musculus,severe fever with thrombocytopenia syndromevirus ,"Zhao, H., Deng, Z.",3.53,X-RAY DIFFRACTION,0.324,0.250,False,True,IGHV5,IGKV1,Kappa,,,,,,8xk8_C_D_B,False
8sr0,Y,Z,0,X,protein,,lymphocyte activation gene 3 protein,IMMUNOSUPPRESSANT,09/06/23,CryoEM structure of a therapeutic antibody (favezelimab) bound to human LAG3 local refined,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Mishra, A.K., Shahid, S., Karade, S.S., Mariuzza, R.A.",3.53,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,8sr0_Y_Z_X,False
8csj,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,01/08/09,Cryo-EM structure of NTD-directed non-neutralizing antibody 4-33 in complex with prefusion SARS-CoV-2 spike glycoprotein,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Reddem, E.R., Shapiro, L.",3.53,ELECTRON MICROSCOPY,,,False,True,IGHV7,IGLV1,Lambda,,,,,,8csj_H_L_A,False
8v5s,H,L,0,C,protein,,envelope glycoprotein e,VIRAL PROTEIN,10/09/24,VZV glycoprotein E C-terminal domain (cleaved) in complex with human Fab 5A2,Homo sapiens; Human alphaherpesvirus 3,homo sapiens,homo sapiens,human alphaherpesvirus 3,"Harshbarger, W., Malito, E.",3.53,X-RAY DIFFRACTION,0.307,0.261,False,True,IGHV4,IGKV1,Kappa,,,,,,8v5s_H_L_C,False
7dzx,H,L,0,C,protein,,spike glycoprotein,VIRAL PROTEIN,01/26/21,Spike protein from SARS-CoV2 with Fab fragment of enhancing antibody 8D2,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Liu, Y., Soh, W.T., Li, S., Kishikawa, J., Hirose, M., Kato, T., Standley, D., Okada, M., Arase, H.",3.53,ELECTRON MICROSCOPY / HOMOLOGY MODEL,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7dzx_H_L_C,False
8tth,C,D,0,A,protein,,quinolone resistance protein nora,TRANSPORT PROTEIN/IMMUNE SYSTEM,05/29/24,NorA single mutant - D307N at pH 7.5,Homo sapiens; Staphylococcus aureus,homo sapiens,homo sapiens,staphylococcus aureus,"Li, J.P., Li, Y., Koide, A., Kuang, H.H., Torres, V.J., Koide, S., Wang, D.N., Traaseth, N.J.",3.54,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8tth_C_D_A,False
7kde,J,I,0,F,protein,,envelope glycoprotein gp120,VIRAL PROTEIN/Immune System,10/08/20,BG505 SOSIP.664 in complex with the V3-targeting rhesus macaque antibody 1485 and human gp120-gp41 interface antibody 8ANC195,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Barnes, C.O., Bjorkman, P.J.",3.55,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGLV1,Lambda,,,,,,7kde_J_I_F,False
8xsd,I,K,0,B,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,02/12/25,BA.5 Spike complex with CR9,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Feng, L.L.",3.55,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV3,Kappa,,,,,,8xsd_I_K_B,False
7r8n,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,06/26/21,Structure of the SARS-CoV-2 S 6P trimer in complex with neutralizing antibody C051,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Barnes, C.O., Bjorkman, P.J.",3.55,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV2,Lambda,,,,,,7r8n_H_L_A,False
7rdw,G,I,0,N,protein,,glycoprotein 120,IMMUNE SYSTEM,07/12/21,Crystal Structure of FH1 Fab bound to HXb2 HIV-1 gp120 core,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Weidle, C., Pancera, M.",3.55,X-RAY DIFFRACTION,0.295,0.260,False,True,IGHV1,IGKV3,Kappa,,,,,,7rdw_G_I_N,False
8jag,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN,12/18/24,Cryo-EM structure of SARS-CoV-1 RBD in complex with W328-6H2 (local refinement),Homo sapiens; Severe acute respiratory syndrome-related coronavirus,homo sapiens,homo sapiens,severe acute respiratory syndrome-relatedcoronavirus ,"Nan, X.Y., Li, Y.J.",3.55,ELECTRON MICROSCOPY,,,False,True,IGHV7,IGKV2,Kappa,,,,,,8jag_H_L_A,False
9cf7,H,L,0,C,protein,,germline-targeting hiv-1 gp120 engineered outer domaineodgt8 ,IMMUNE SYSTEM,06/25/25,Germline-targeting HIV-1 gp120 engineered outer domain eODgt8 in complex with Fab eOD-PL01.1,Homo sapiens; Human immunodeficiency virus 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Sarkar, A., Stanfield, R.L., Wilson, I.A.",3.55,X-RAY DIFFRACTION,0.299,0.265,False,True,IGHV4,IGKV1,Kappa,,,,,,9cf7_H_L_C,False
7l2d,H,L,0,A,protein,,spike glycoprotein,Viral protein/Immune system,12/16/20,Cryo-EM structure of NTD-directed neutralizing antibody 1-87 in complex with prefusion SARS-CoV-2 spike glycoprotein,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Cerutti, G., Shapiro, L.",3.55,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV2,Lambda,,,,,,7l2d_H_L_A,False
8kei,C,E,0,B,protein,,cytochrome b-245 heavy chain,IMMUNE SYSTEM,05/22/24,Cryo-EM structure of NADPH oxidase 2 in complex with p22phox and EROS,Homo sapiens; Oryctolagus cuniculus,oryctolagus cuniculus,oryctolagus cuniculus,homo sapiens,"Liang, S.Y., Liu, A.J., Liu, Y.Z., Ye, R.D.",3.56,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,8kei_C_E_B,False
5w42,H,L,0,A,protein,,hemagglutinin,IMMUNE SYSTEM,06/08/17,Crystal structure of human monoclonal antibody H3v-47 in complex with influenza virus hemagglutinin from A/Minnesota/11/2010 (H3N2),INFLUENZA A VIRUS (A/SWINE/MINNESOTA/A01134337/2010(H3N2)); INFLUENZA A VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus(a/swine/minnesota/a01134337/2010(h3n2)) ,"Zhang, H., Wilson, I.A.",3.569,X-RAY DIFFRACTION,0.228,0.196,False,True,IGHV1,IGKV3,Kappa,4.43e-08,-10.032100252409448,SPR,,TBD,5w42_H_L_A,False
9dzq,H,J,0,B,protein,,hemagglutinin-neuraminidase,VIRAL PROTEIN/IMMUNE SYSTEM,12/04/24,CryoEM structure of the human antibodies PIV3HN-05 and PIV3HN-13 in complex with the parainfluenza virus hemagglutinin-neuraminidase protein,Homo sapiens; Human respirovirus 3,homo sapiens,homo sapiens,human respirovirus 3,"Mousa, J.J., Miller, R.J.",3.57,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV2,Kappa,,,,,,9dzq_H_J_B,False
6p62,C,D,0,B,protein,,hiv-1 env bg505 nfl td+,VIRAL PROTEIN/immune system,05/31/19,HIV Env BG505 NFL TD+ in complex with antibody E70 fragment antigen binding,HUMAN IMMUNODEFICIENCY VIRUS 1; ORYCTOLAGUS CUNICULUS,oryctolagus cuniculus,oryctolagus cuniculus,human immunodeficiency virus 1,"Ozorowski, G., Torres, J.L., Ward, A.B.",3.57,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,6p62_C_D_B,False
7mmn,M,G,0,K,protein,,"fusion glycoprotein f1,fibritin",IMMUNE SYSTEM/VIRAL PROTEIN,04/29/21,Crystal Structure of the Prefusion RSV F Glycoprotein bound by human antibody AM14,HOMO SAPIENS; HUMAN RESPIRATORY SYNCYTIAL VIRUS; ENTEROBACTERIA PHAGE T4,homo sapiens,homo sapiens,"human respiratory syncytial virus,enterobacteria phage t4 ","Harshbarger, W., Malito, E.",3.57,X-RAY DIFFRACTION,0.245,0.202,False,True,IGHV3,IGKV1,Kappa,,,,,,7mmn_M_G_K,False
8v7o,H,L,0,A,protein,,hemagglutinin,VIRAL PROTEIN/IMMUNE SYSTEM,04/10/24,Fab fragment of human mAb #58 in complex with computationally optimized broadly reactive H1 influenza hemagglutinin X6,Homo sapiens; Influenza A virus,homo sapiens,homo sapiens,influenza a virus,"Nagashima, K.A., Mousa, J.J.",3.57,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV3,Kappa,,,,,,8v7o_H_L_A,False
8bbn,C,D,0,Y,protein,,spike protein s1,VIRAL PROTEIN,03/22/23,SARS-CoV-2 Delta-RBD complexed with BA.2-10 and EY6A Fabs,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, D., Ren, J., Stuart, D.I.",3.58,X-RAY DIFFRACTION,0.314,0.265,False,True,IGHV3,IGKV1,Kappa,,,,,,8bbn_C_D_Y,False
9bp1,H,D,0,E,peptide,,envelope glycoprotein gp160,IMMUNE SYSTEM/Viral protein,01/15/25,Rhesus macaque ITS110.01 Fab in complex with SIV Env MPER peptide,Macaca mulatta; SYNTHETIC CONSTRUCT,macaca mulatta,macaca mulatta,simian immunodeficiency virus,"Gorman, J., Kwong, P.D.",3.58,X-RAY DIFFRACTION,0.268,0.220,False,True,IGHV4,IGKV1,Kappa,,,,,,9bp1_H_D_E,False
8kdi,H,L,0,A,protein,,4f2 cell-surface antigen heavy chain,TRANSPORT PROTEIN/IMMUNE SYSTEM,02/12/25,"Structure of apo inward-open LAT1-CD98hc-Fab170 in nanodisc, consensus map",Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Lee, Y.",3.58,ELECTRON MICROSCOPY,,,False,False,IGHV1,IGKV8,Kappa,,,,,,8kdi_H_L_A,False
9nww,D,C,0,B,protein,,probable phosphatidylethanolamine transferase mcr-1,TRANSFERASE,12/17/25,Single-particle cryo-EM structure of the first variant of mobilized colistin resistance (MCR-1) in its ligand-bound state,Escherichia coli; Homo sapiens,homo sapiens,homo sapiens,escherichia coli,"Zinkle, A.P., Bunuro-Batista, M., Herrera, C.M., Erramilli, S.K., Kloss, B., Ashraf, K.U., Nosol, K., Zhang, G., Cater, R.J., Marty, M.T., Kossiakoff, A.A., Trent, M.S., Nygaard, R., Stansfeld, P.J., Mancia, F.",3.58,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,9nww_D_C_B,False
6rcv,C,B,0,A,protein,,reticulocyte binding protein homologue 5,CELL ADHESION,04/11/19,PfRH5 bound to monoclonal antibodies R5.011 and R5.016,PLASMODIUM FALCIPARUM; HOMO SAPIENS,homo sapiens,homo sapiens,plasmodium falciparum,"Alanine, D.W.G., Draper, S.J., Higgins, M.K.",3.582,X-RAY DIFFRACTION,0.305,0.280,False,True,IGHV7,IGLV3,Lambda,,,,,,6rcv_C_B_A,False
8ee5,H,L,0,Z,protein,,envelope protein e,VIRAL PROTEIN/IMMUNE SYSTEM,08/30/23,Crystal structure of a NHP anti-ZIKV neutralizing antibody rhMZ119-D in complex with ZIKV E glycoprotein,Macaca mulatta; Zika virus ZIKV/H. sapiens/FrenchPolynesia/10087PF/2013,macaca mulatta,macaca mulatta,zika virus zikv/h.sapiens/frenchpolynesia/10087pf/2013 ,"Sankhala, R.S., Joyce, M.G.",3.583,X-RAY DIFFRACTION,0.296,0.249,False,True,IGHV5,IGLV3,Lambda,,,,,,8ee5_H_L_Z,False
7so7,H,L,0,A,protein,,toxin b,TOXIN/IMMUNE SYSTEM,10/29/21,Novel structural insights for a pair of monoclonal antibodies recognizing non-overlapping epitopes of the glucosyltransferase domain of Clostridium difficile toxin B,CLOSTRIDIOIDES DIFFICILE; HOMO SAPIENS,homo sapiens,homo sapiens,clostridioides difficile,"Liu, J.",3.59,X-RAY DIFFRACTION,0.258,0.209,False,True,IGHV3,IGLV5,Lambda,,,,,,7so7_H_L_A,False
9mr1,A,B,0,C,protein,,spike protein s2,VIRUS,11/26/25,SARS-CoV-2 S2 monomer in complex with R125-61 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Park, S., Bangaru, B., Ward, A.B.",3.59,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV4,Kappa,,,,,,9mr1_A_B_C,False
7e5y,C,B,0,A,protein,,spike protein s1,VIRAL PROTEIN,02/21/21,Molecular basis for neutralizing antibody 2B11 targeting SARS-CoV-2 RBD,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Wu, H., Yu, F., Wang, Q.S., Zhou, H., Wang, W.W., Zhao, T., Pan, Y.B., Yang, X.M.",3.59,X-RAY DIFFRACTION,0.277,0.232,False,True,IGHV3,IGLV1,Lambda,,,,,,7e5y_C_B_A,False
8tvh,I,H,0,C,protein,,fusion glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,05/08/24,"Langya henipavirus postfusion F protein in complex with 4G5 Fab, local refinement of the viral membrane proximal region",Langya virus; Mus musculus,mus musculus,mus musculus,langya virus,"Wang, Z., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler, D.",3.6,ELECTRON MICROSCOPY,,,False,True,IGHV14,IGKV12,Kappa,,,,,,8tvh_I_H_C,False
9omg,H,L,0,A,protein,,hiv env gp120,VIRAL PROTEIN/IMMUNE SYSTEM,11/05/25,Cryo-EM structure of rhesus antibody V033-a.I1 in complex with HIV Env trimer Q23.17 MD39,Homo sapiens; Macaca mulatta,macaca mulatta,macaca mulatta,homo sapiens,"Roark, R.S., Shapiro, L., Kwong, P.D.",3.6,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,9omg_H_L_A,False
6cdi,3,4,0,A,protein,,glycoprotein gp41,VIRAL PROTEIN,02/08/18,"Cryo-EM structure at 3.6 A resolution of vaccine-elicited antibody vFP16.02 in complex with HIV-1 Env BG505 DS-SOSIP, and antibodies VRC03 and PGT122",HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Acharya, P., Xu, K., Liu, K., Carragher, B., Potter, C.S., Kwong, P.D.",3.6,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,6cdi_3_4_A,False
5vn8,I,K,0,E,protein,,envelope glycoprotein gp160,IMMUNE SYSTEM,04/28/17,Cryo-EM model of B41 SOSIP.664 in complex with fragment antigen binding variable domain of b12,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Ozorowski, G., Pallesen, J., Ward, A.B., Cottrell, C.A.",3.6,ELECTRON MICROSCOPY / HOMOLOGY MODEL,,,False,True,IGHV1,IGKV3,Kappa,,,,,,5vn8_I_K_E,False
7lex,G,I,0,A,protein,,arginase-1,HYDROLASE/IMMUNE SYSTEM,01/15/21,Trimeric human Arginase 1 in complex with mAb1 - 2 hArg:3 mAb1 complex,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Gomez-Llorente, Y., Scapin, G., Palte, R.L.",3.6,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,7lex_G_I_A,False
5uqy,D,C,0,A,protein,,envelope glycoprotein gp1,VIRAL PROTEIN/IMMUNE SYSTEM,02/08/17,Crystal structure of Marburg virus GP in complex with the human survivor antibody MR78,LAKE VICTORIA MARBURGVIRUS (STRAIN RAVN-87); HOMO SAPIENS,homo sapiens,homo sapiens,lake victoria marburgvirus (strain ravn-87),"Hashiguchi, T., Fusco, M.L., Hastie, K.M., Bomholdt, Z.A., Lee, J.E., Flyak, A.I., Matsuoka, R., Kohda, D., Yanagi, Y., Hammel, M., Crowe, J.E., Saphire, E.O.",3.6,X-RAY DIFFRACTION,0.262,0.221,False,False,IGHV4,IGKV1,Kappa,,,,,,5uqy_D_C_A,False
7l56,J,K,0,B,protein,,spike glycoprotein,VIRAL PROTEIN/Immune System,12/21/20,Cryo-EM structure of the SARS-CoV-2 spike glycoprotein bound to Fab 2-43,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Rapp, M., Shapiro, L.",3.6,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV2,Lambda,,,,,,7l56_J_K_B,False
7jva,H,L,0,A,protein,,sars-cov-2 spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,08/20/20,SARS-CoV-2 spike in complex with the S2A4 neutralizing antibody Fab fragment (local refinement of the receptor-binding domain and Fab variable domains),HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Park, Y.J., Tortorici, M.A., Walls, A.C., Czudnochowski, N., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Snell, G., Veesler, D.",3.6,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV6,Lambda,,,,,,7jva_H_L_A,False
9b6w,H,I,0,C,protein,,envelope protein,VIRUS/IMMUNE SYSTEM,09/03/25,Envelope protein ASU of YFV-ES504 with YFV-17D DIII in complex with 2C9 Fab,Mus musculus; Yellow fever virus,mus musculus,mus musculus,yellow fever virus,"Bibby, S., James, J., Modhiran, N., Watterson, D.",3.6,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGKV14,Kappa,,,,,,9b6w_H_I_C,False
9n5h,D,E,0,A,protein,,gametocyte surface protein p230,IMMUNE SYSTEM,10/15/25,"Endogenous Pfs230D1-6 in complex with RUPA-97, LMIV230-01, and 2A2 Fab domains",Homo sapiens; Mus musculus; Plasmodium falciparum 3D7,homo sapiens,homo sapiens,plasmodium falciparum 3d7,"Heide, F., Yoo, R., Ivanochko, D., Hailemariam, S., Bekkering, E., Julien, J.P.",3.6,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,9n5h_D_E_A,False
9n5h,B,C,0,A,protein,,gametocyte surface protein p230,IMMUNE SYSTEM,10/15/25,"Endogenous Pfs230D1-6 in complex with RUPA-97, LMIV230-01, and 2A2 Fab domains",Homo sapiens; Mus musculus; Plasmodium falciparum 3D7,mus musculus,mus musculus,plasmodium falciparum 3d7,"Heide, F., Yoo, R., Ivanochko, D., Hailemariam, S., Bekkering, E., Julien, J.P.",3.6,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV6,Kappa,,,,,,9n5h_B_C_A,False
7dx4,H,L,0,E,protein,,spike protein s1,VIRAL PROTEIN,01/18/21,The structure of FC08 Fab-hA.CE2-RBD complex,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Cao, L., Wang, X.",3.6,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV1,Lambda,,,,,,7dx4_H_L_E,False
5w9i,C,D,0,A,protein,,spike glycoprotein,VIRAL PROTEIN,06/23/17,MERS S ectodomain trimer in complex with variable domain of neutralizing antibody G4,MIDDLE EAST RESPIRATORY SYNDROME-RELATED CORONAVIRUS; MUS MUSCULUS,mus musculus,mus musculus,middle east respiratory syndrome-relatedcoronavirus ,"Pallesen, J., Ward, A.B.",3.6,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,5w9i_C_D_A,False
6pzz,I,G,0,C,protein,,neuraminidase,VIRAL PROTEIN/IMMUNE SYSTEM,08/01/19,CryoEM derived model of NA-80 Fab in complex with N9 Shanghai2,INFLUENZA A VIRUS (A/ENVIRONMENT/SHANGHAI/S1439/2013(H7N9)); HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus(a/environment/shanghai/s1439/2013(h7n9)) ,"Ward, A.B., Turner, H.L., Zhu, X.",3.6,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,6pzz_I_G_C,False
8xbf,D,E,0,A,protein,,spike glycoprotein,VIRAL PROTEIN,06/19/24,Cryo-EM structure of SARS-CoV-2 S-BQ.1 in complex with antibody O5C2,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Hsu, H.F., Wu, M.H., Chang, Y.C., Hsu, S.T.D.",3.6,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8xbf_D_E_A,False
7ej4,I,M,0,B,protein,,spike glycoprotein,VIRAL PROTEIN,04/01/21,Cryo-EM structure of SARS-CoV-2 spike in complex with a neutralizing antibody RBD-chAb-25,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Yang, T.J., Yu, P.Y., Wu, H.C., Hsu, S.T.D.",3.6,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGKV4,Kappa,,,,,,7ej4_I_M_B,False
7rbv,h,l,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,07/06/21,SARS-CoV-2 Spike in complex with PVI.V6-14 Fab,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Altomare, C.G., Bajic, G.",3.6,ELECTRON MICROSCOPY,,,False,False,IGHV4,IGKV1,Kappa,,,,,,7rbv_h_l_A,False
8zpp,H,L,0,A,protein,,"spike glycoprotein,fibritin",VIRAL PROTEIN,12/25/24,Local CryoEM structure of the SARS-CoV-2 BA.5 in complex with ORB10 Fab,Mus musculus; Severe acute respiratory syndrome coronavirus 2,mus musculus,mus musculus,severe acute respiratory syndrome coronavirus2 ,"Cao, S., Leng, C., Hu, H.",3.6,ELECTRON MICROSCOPY,,,False,False,IGHV1,IGKV4,Kappa,,,,,,8zpp_H_L_A,False
7q9f,J,K,0,C,protein,,surface glycoprotein,Viral Protein/Immune System,11/12/21,Beta-50 fab in complex with SARS-CoV-2 beta-Spike glycoprotein,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Duyvesteyn, H.M.E., Ren, J., Stuart, D.I.",3.6,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,7q9f_J_K_C,False
7dzy,H,L,0,B,protein,,spike glycoprotein,VIRAL PROTEIN,01/26/21,Spike protein from SARS-CoV2 with Fab fragment of enhancing antibody 2490,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Liu, Y., Soh, W.T., Li, S., Kishikawa, J., Hirose, M., Kato, T., Standley, D., Okada, M., Arase, H.",3.6,ELECTRON MICROSCOPY / HOMOLOGY MODEL,,,False,True,IGHV3,IGKV3,Kappa,,,,,,7dzy_H_L_B,False
7ntc,H,L,0,C,protein,,spike glycoprotein,VIRAL PROTEIN,03/09/21,Trimeric SARS-CoV-2 spike ectodomain bound to P008_056 Fab,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Rosa, A., Pye, V.E., Nans, A., Cherepanov, P.",3.6,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7ntc_H_L_C,False
7nd7,F,G,0,B,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,01/30/21,EM structure of SARS-CoV-2 Spike glycoprotein in complex with COVOX-316 Fab,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Duyvesteyn, H.M.E., Zhao, Y., Ren, J., Stuart, D.",3.6,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV2,Lambda,,,,,,7nd7_F_G_B,False
8elj,W,X,0,C,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,07/19/23,SARS-CoV-2 spike glycoprotein in complex with the ICO-hu23 neutralizing antibody Fab fragment,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Yee, A.W., Morizumi, T., Kim, K., Kuo, A., Ernst, O.P.",3.6,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV2,Lambda,,,,,,8elj_W_X_C,False
7mdt,H,L,0,A,protein,,surface protein gp120,VIRAL PROTEIN,04/06/21,BG505 SOSIP.v5.2 in complex with the monoclonal antibody Rh4O9.8 (as Fab fragment),HUMAN IMMUNODEFICIENCY VIRUS 1; MACACA MULATTA,macaca mulatta,macaca mulatta,human immunodeficiency virus 1,"Antanasijevic, A., Ozorowski, G., Nogal, B., Ward, A.B.",3.6,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV1,Lambda,,,,,,7mdt_H_L_A,False
7niv,C,B,0,A,protein,,isoform 2 of phosphatidylcholine translocator abcb4,PROTEIN TRANSPORT,02/14/21,"Nanodisc reconstituted human ABCB4 in complex with 4B1-Fab and QA2-Fab (phosphatidylcholine-bound, occluded conformation)",HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Nosol, K., Locher, K.P.",3.6,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7niv_C_B_A,False
4xx1,M,O,0,J,protein,,phosphatidylcholine-sterol acyltransferase,Hydrolase/Immune system,01/29/15,Low resolution structure of LCAT in complex with Fab1,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Piper, D.E., Walker, N.P.C., Romanow, W.G., Thibault, S.T.",3.6,X-RAY DIFFRACTION,0.280,0.196,False,True,IGHV3,IGLV3,Lambda,,,,,,4xx1_M_O_J,False
8gdr,C,D,0,F,protein,,spike glycoprotein,VIRAL PROTEIN,03/13/24,SARS-Cov2 S protein structure in complex with neutralizing monoclonal antibody 002-S21B10,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Patel, A., Ortlund, E.A.",3.6,ELECTRON MICROSCOPY,,,False,True,IGHV2,IGLV2,Lambda,,,,,,8gdr_C_D_F,False
8ekd,E,F,0,G,protein,,spike protein s2',IMMUNE SYSTEM,02/21/24,Cryo-EM map of SARS-CoV-2 Omicron BA.2 spike in complex with LLNL-199,Homo sapiens; Severe acute respiratory syndrome coronavirus,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus,"Binshtein, E., Crowe, J.E.",3.6,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV4,Kappa,,,,,,8ekd_E_F_G,False
7tri,Z,Y,0,B,protein,,hemagglutinin,IMMUNE SYSTEM/VIRAL PROTEIN,08/02/23,Human antibody S8V1-172 in complex with the influenza hemagglutinin head domain of A/Sydney/05/1997(H3N2),Homo sapiens; Influenza A virus (A/Sydney/5/1997(H3N2)),homo sapiens,homo sapiens,influenza a virus (a/sydney/5/1997(h3n2)),"McCarthy, K.R.",3.6,X-RAY DIFFRACTION,0.268,0.233,False,True,IGHV4,IGKV3,Kappa,,,,,,7tri_Z_Y_B,False
7rd5,D,C,0,E,protein,,tetraspanin-15,CELL ADHESION,07/09/21,Crystal structure of Tspan15 large extracellular loop (Tspan15 LEL) in complex with 1C12 Fab,MUS MUSCULUS; HOMO SAPIENS,mus musculus,mus musculus,homo sapiens,"Lipper, C.H., Gabriel, K.H., Seegar, T.C.M., Durr, K.L., Tomlinson, M.G., Blacklow, S.C.",3.6,X-RAY DIFFRACTION,0.309,0.271,False,True,IGHV1,IGKV15,Kappa,,,,,,7rd5_D_C_E,False
8gau,H,L,0,A,protein,,"vasodilator-stimulated phosphoprotein, neuraminidasechimera ",VIRAL PROTEIN/IMMUNE SYSTEM,02/28/24,Structure of human NDS.1 Fab and 1G01 Fab in complex with influenza virus neuraminidase from A/Indiana/10/2011 (H3N2v),Homo sapiens; Influenza A virus (A/Indiana/10/2011(H3N2)),homo sapiens,homo sapiens,"homo sapiens, influenza a virus(a/indiana/10/2011(h3n2)) ","Tsybovsky, Y., Lederhofer, J., Kwong, P.D., Kanekiyo, M.",3.6,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV1,Kappa,,,,,,8gau_H_L_A,False
7yvj,C,A,0,B,protein,,spike glycoprotein,ANTIVIRAL PROTEIN/VIRAL PROTEIN,06/28/23,Omicron BA.4/5 SARS-CoV-2 S RBD in complex with TH236 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Guo, Y., Zhang, G., Liang, J., Liu, F., Rao, Z.",3.6,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV2,Lambda,,,,,,7yvj_C_A_B,False
8i3u,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,10/04/23,Local CryoEM structure of the SARS-CoV-2 S6P in complex with 14B1 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Li, Z., Yu, F., Cao, S.",3.6,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV3,Kappa,,,,,,8i3u_H_L_A,False
7k8w,N,S,0,G,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,09/27/20,"Structure of the SARS-CoV-2 S 2P trimer in complex with the human neutralizing antibody Fab fragment, C119",SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Sharaf, N.G., Barnes, C.O., Bjorkman, P.J.",3.6,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV2,Lambda,,,,,,7k8w_N_S_G,False
8phw,H,L,0,A,protein,,solute carrier organic anion transporter family member 1b1,TRANSPORT PROTEIN,09/27/23,Human OATP1B1,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Ciuta, A.-D., Nosol, K., Kowal, J., Mukherjee, S., Ramirez, A.S., Stieger, B., Kossiakoff, A.A., Locher, K.P.",3.6,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8phw_H_L_A,False
7n4l,H,L,0,A,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,06/04/21,Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing human antibody WRAIR-2125.,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Sankhala, R.S., Joyce, M.G.",3.601,X-RAY DIFFRACTION,0.329,0.262,False,True,IGHV3,IGKV1,Kappa,,,,,,7n4l_H_L_A,False
6xpy,B,C,0,A,protein,,hemagglutinin,IMMUNE SYSTEM/VIRAL PROTEIN,07/09/20,Human antibody S1V2-58 in complex with the influenza hemagglutinin head domain of A/Texas/50/2012(H3N2),INFLUENZA A VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus,"McCarthy, K.R., Harrison, S.C.",3.603,X-RAY DIFFRACTION,0.304,0.256,False,True,IGHV4,IGKV1,Kappa,,,,,,6xpy_B_C_A,False
4o02,H,L,0,A,protein,,integrin alpha-v,Protein binding,12/13/13,AlphaVBeta3 integrin in complex with monoclonal antibody FAB fragment.,HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Mahalingam, B., van Agthoven, J., Xiong, J., Arnaout, M.A.",3.605,"X-RAY DIFFRACTION, 1",0.312,0.246,False,False,IGHV1,IGKV10,Kappa,,,,,,4o02_H_L_A,False
7ew5,Q,R,0,b,protein,,unknown,VIRAL PROTEIN,05/24/21,immune complex of HPV6 L1 pentamer and neutralizing antibody 13H5,HUMAN PAPILLOMAVIRUS TYPE 6; MUS MUSCULUS,mus musculus,mus musculus,human papillomavirus type 6,"Wang, Z.P., Wang, D.N., Gu, Y., Li, S.W.",3.606,X-RAY DIFFRACTION,0.293,0.252,False,False,IGHV14,IGKV6,Kappa,,,,,,7ew5_Q_R_b,False
8so3,Y,Z,0,X,protein,,lymphocyte activation gene 3 protein,IMMUNOSUPPRESSANT,09/06/23,CryoEM structure of a therapeutic antibody (favezelimab) bound to human LAG3,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Mishra, A.K., Shahid, S., Karade, S.S., Mariuzza, R.A.",3.61,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,8so3_Y_Z_X,False
9j83,H,L,0,A,protein,,putative zinc metalloprotease aq_1964,HYDROLASE,03/05/25,Cryo-EM structure of intramembrane protease,Aquifex aeolicus VF5; Escherichia coli; Mus musculus,mus musculus,mus musculus,aquifex aeolicus vf5,"Asahi, K., Hirose, M., Aruga, R., Kato, T., Nogi, T.",3.61,ELECTRON MICROSCOPY,,,False,True,IGHV7,IGKV6,Kappa,,,,,,9j83_H_L_A,False
8dyy,A,B,0,I,protein,,circumsporozoite protein,IMMUNE SYSTEM,08/02/23,Cryo-EM structure of 334 Fab in complex with recombinant shortened Plasmodium falciparum circumsporozoite protein (rsCSP),Homo sapiens; Plasmodium falciparum,homo sapiens,homo sapiens,plasmodium falciparum,"Martin, G.M., Ward, A.B.",3.62,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8dyy_A_B_I,False
8tnl,A,B,0,C,protein,,hemagglutinin,VIRAL PROTEIN/IMMUNE SYSTEM,05/15/24,CryoEM structure of H7 hemagglutinin from A/Shanghai2/2013 H7N9 in complex with a human neutralizing antibody H7.HK1,Homo sapiens; Influenza A virus (A/Shanghai/02/2013(H7N9)),homo sapiens,homo sapiens,influenza a virus (a/shanghai/02/2013(h7n9)),"Morano, N.C., Wu, X., Shapiro, L.",3.62,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV2,Kappa,,,,,,8tnl_A_B_C,False
8dcy,A,B,0,C,protein,,envelopment polyprotein,VIRAL PROTEIN,12/07/22,CCHFV GP38 Hoti/Kosovo bound with 13G8 Fab,Crimean-Congo hemorrhagic fever orthonairovirus; Mus musculus,mus musculus,mus musculus,crimean-congo hemorrhagic feverorthonairovirus ,"Durie, I.A., Bergeron, E., Pegan, S.D., McGuire, J.",3.62,X-RAY DIFFRACTION,0.299,0.281,False,True,IGHV2,IGKV4,Kappa,,,,,,8dcy_A_B_C,False
8dg8,H,L,0,B,protein,,fusion glycoprotein f0,IMMUNE SYSTEM,02/22/23,Cryo-EM Structure of HPIV3 prefusion F trimer in complex with 3x1 Fab,Homo sapiens; Human parainfluenza 3 virus (strain NIH 47885),homo sapiens,homo sapiens,human parainfluenza 3 virus (strain nih 47885),"Rodarte, J.V., Pancera, M.",3.62,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV3,Lambda,,,,,,8dg8_H_L_B,False
8hlb,B,C,0,A,protein,,"tumor necrosis factor receptor superfamily member 1b,maltose/maltodextrin-binding periplasmic protein ",IMMUNE SYSTEM,10/04/23,Cryo-EM structure of biparatopic antibody Bp109-92 in complex with TNFR2,Escherichia coli (strain K12); Homo sapiens,homo sapiens,homo sapiens,"homo sapiens, escherichia coli (strain k12)","Akiba, H., Fujita, J., Ise, T., Nishiyama, K., Miyata, T., Kato, T., Namba, K., Ohno, H., Kamada, H., Nagata, S., Tsumoto, K.",3.63,ELECTRON MICROSCOPY,,,False,True,IGHV2,IGKV3,Kappa,,,,,,8hlb_B_C_A,False
9mq7,I,M,0,C,protein,,hemagglutinin ha1 chain,VIRAL PROTEIN/IMMUNE SYSTEM,08/13/25,Cryo-EM structure of hemagglutinin H5N1 in complex with Fab 326-366.26,Homo sapiens; Influenza A virus,homo sapiens,homo sapiens,influenza a virus,"Malla, T.N., Tsybovsky, Y., Zhou, T.",3.63,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV3,Kappa,,,,,,9mq7_I_M_C,False
8hlb,D,E,0,A,protein,,"tumor necrosis factor receptor superfamily member 1b,maltose/maltodextrin-binding periplasmic protein ",IMMUNE SYSTEM,10/04/23,Cryo-EM structure of biparatopic antibody Bp109-92 in complex with TNFR2,Escherichia coli (strain K12); Homo sapiens,homo sapiens,homo sapiens,"homo sapiens, escherichia coli (strain k12)","Akiba, H., Fujita, J., Ise, T., Nishiyama, K., Miyata, T., Kato, T., Namba, K., Ohno, H., Kamada, H., Nagata, S., Tsumoto, K.",3.63,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV6,Kappa,,,,,,8hlb_D_E_A,False
5ezo,H,L,0,A,protein,,uncharacterized protein,IMMUNE SYSTEM,11/26/15,Crystal Structure of PfCyRPA,PLASMODIUM FALCIPARUM (ISOLATE 3D7); MUS MUSCULUS; HOMO SAPIENS,homo sapiens,mus musculus,plasmodium falciparum (isolate 3d7),"Favuzza, P., Pluschke, G., Rudolph, M.G.",3.63,X-RAY DIFFRACTION,0.330,0.274,False,True,IGHV4,IGKV6,Kappa,,,,,,5ezo_H_L_A,False
8bg8,H,L,0,A,protein,,spike glycoprotein,PROTEIN BINDING,11/08/23,SARS-CoV-2 S protein in complex with pT1696 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Hansen, G., Benecke, T., Vollmer, B., Gruenewald, K., Krey, T.",3.64,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,8bg8_H_L_A,False
7yoy,F,J,0,C,protein,,soluble gp42,VIRAL PROTEIN,01/31/24,Cryo-EM structure of EBV gHgL-gp42 in complex with mAbs 3E8 and 5E3 (localized refinement),Human gammaherpesvirus 4; Oryctolagus cuniculus,oryctolagus cuniculus,oryctolagus cuniculus,human gammaherpesvirus 4,"Liu, L., Sun, H., Jiang, Y., Hong, J., Zheng, Q., Li, S., Chen, Y., Xia, N.",3.64,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,7yoy_F_J_C,False
7yoy,E,I,0,C,protein,,soluble gp42,VIRAL PROTEIN,01/31/24,Cryo-EM structure of EBV gHgL-gp42 in complex with mAbs 3E8 and 5E3 (localized refinement),Human gammaherpesvirus 4; Oryctolagus cuniculus,oryctolagus cuniculus,oryctolagus cuniculus,human gammaherpesvirus 4,"Liu, L., Sun, H., Jiang, Y., Hong, J., Zheng, Q., Li, S., Chen, Y., Xia, N.",3.64,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,7yoy_E_I_C,False
4q6i,E,D,0,J,protein,,t-cell surface glycoprotein cd4,IMMUNE SYSTEM,04/22/14,"Crystal structure of murine 2D5 Fab, a potent anti-CD4 HIV-1-neutralizing antibody in complex with CD4",HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,homo sapiens,"Boyington, J.C., Nabel, G.J., Mascola, J.R.",3.65,X-RAY DIFFRACTION,0.257,0.226,False,False,IGHV9,IGKV3,Kappa,,,,,,4q6i_E_D_J,False
8fsj,C,B,0,E,protein,,"hcv e2 ectodomain, synzip2 scaffold fusion",VIRAL PROTEIN,07/19/23,"Cryo-EM structure of engineered hepatitis C virus E1E2 ectodomain in complex with antibodies AR4A, HEPC74, and IGH520",Hepacivirus C; Homo sapiens; synthetic construct,homo sapiens,homo sapiens,"hepacivirus c, synthetic construct","Metcalf, M.C., Ofek, G.",3.65,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGKV3,Kappa,,,,,,8fsj_C_B_E,False
6x97,J,K,0,G,protein,,bg505 hiv-1 env gp120,VIRAL PROTEIN/IMMUNE SYSTEM,06/02/20,Cryo-EM model of HIV-1 Env BG505 SOSIP.664 in complex with rabbit monoclonal antibody 11A fragment antigen binding variable domain,HUMAN IMMUNODEFICIENCY VIRUS 1; ORYCTOLAGUS CUNICULUS,oryctolagus cuniculus,oryctolagus cuniculus,human immunodeficiency virus 1,"Ozorowski, G., Cottrell, C.A., Ward, A.B.",3.65,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,6x97_J_K_G,False
7l2c,C,D,0,B,protein,,spike glycoprotein,IMMUNE SYSTEM/Viral Protein,12/16/20,Crystallographic structure of neutralizing antibody 2-51 in complex with SARS-CoV-2 spike N-terminal domain (NTD),SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Cerutti, G., Reddem, E.R., Shapiro, L.",3.65,X-RAY DIFFRACTION,0.272,0.216,False,True,IGHV1,IGLV2,Lambda,,,,,,7l2c_C_D_B,False
7ljr,S,T,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,01/30/21,SARS-CoV-2 Spike Protein Trimer bound to DH1043 fab,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Gobeil, S., Acharya, P.",3.66,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,7ljr_S_T_A,False
6woq,G,H,0,F,protein,,envelope glycoprotein e2,IMMUNE SYSTEM/Viral Protein,04/25/20,Structure of Hepatitis C Virus Envelope Glycoprotein E2 core from genotype 1a bound to neutralizing antibody HC1AM and non neutralizing antibody E1,HOMO SAPIENS; HEPATITIS C VIRUS (ISOLATE H),homo sapiens,homo sapiens,hepatitis c virus (isolate h),"Tzarum, N., Wilson, I.A., Law, M.",3.667,X-RAY DIFFRACTION,0.277,0.227,False,True,IGHV1,IGKV3,Kappa,,,,,,6woq_G_H_F,False
6woq,J,K,0,E,protein,,envelope glycoprotein e2,IMMUNE SYSTEM/Viral Protein,04/25/20,Structure of Hepatitis C Virus Envelope Glycoprotein E2 core from genotype 1a bound to neutralizing antibody HC1AM and non neutralizing antibody E1,HOMO SAPIENS; HEPATITIS C VIRUS (ISOLATE H),homo sapiens,homo sapiens,hepatitis c virus (isolate h),"Tzarum, N., Wilson, I.A., Law, M.",3.667,X-RAY DIFFRACTION,0.277,0.227,False,True,IGHV1,IGKV3,Kappa,,,,,,6woq_J_K_E,False
8zby,I,F,0,C,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,05/15/24,SARS-CoV-2 Omicron BA.1 spike trimer (x2-4P) in complex with 3 D1F6 Fabs (0 RBD up),Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Liu, B., Gao, X., Li, Z., Chen, Q., He, J., Xiong, X.",3.67,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV1,Lambda,,,,,,8zby_I_F_C,False
6jhr,E,D,0,C,protein,,vp3,VIRUS,02/18/19,The cryo-EM structure of HAV bound to a neutralizing antibody-F6,HUMAN HEPATITIS A VIRUS HU/AUSTRALIA/HM175/1976; MUS MUSCULUS,mus musculus,mus musculus,human hepatitis a virushu/australia/hm175/1976 ,"Cao, L., Liu, P., Yang, P., Gao, Q., Li, H., Sun, Y., Zhu, L., Lin, J., Su, D., Rao, Z., Wang, X.",3.68,ELECTRON MICROSCOPY,,,False,False,IGHV5,IGKV4,Kappa,,,,,,6jhr_E_D_C,False
7d3l,H,L,0,2,protein,,o/tibet/99 vp2,VIRUS,09/19/20,FOOT AND MOUTH DISEASE VIRUS O/TIBET/99-BOUND THE SINGLE CHAIN FRAGMEN ANTIBODY F145,BOS TAURUS; FOOT-AND-MOUTH DISEASE VIRUS,bos taurus,bos taurus,foot-and-mouth disease virus,"He, Y., Lou, Z.",3.68,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV1,Lambda,,,,,,7d3l_H_L_2,False
9d7i,J,I,0,C,protein,,surface protein gp120,VIRAL PROTEIN/IMMUNE SYSTEM,06/04/25,Cryo-EM structure of BG505 DS-SOSIP.664 with 2 CH103 KN Fabs bound,Homo sapiens; Human immunodeficiency virus 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Parsons, R.J., Acharya, P.",3.68,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGLV3,Lambda,,,,,,9d7i_J_I_C,False
8k18,C,D,0,E,protein,,spike protein s1,VIRAL PROTEIN,10/09/24,Neutralization antibody ZCP4C9 bound with SARS-CoV-2 Omicron BA.5 RBD,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Bingjie, T., Shangyu, D.",3.68,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8k18_C_D_E,False
6n7j,A,B,0,D,peptide,,envelope glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,11/27/18,BDBV223 Fab bound to synthetic peptide of Bundibugyo virus Glycoprotein Stalk,HOMO SAPIENS; SYNTHETIC CONSTRUCT,homo sapiens,homo sapiens,bundibugyo ebolavirus,"King, L.B., West, B.R., Saphire, E.O.",3.684,X-RAY DIFFRACTION,0.254,0.228,False,True,IGHV4,IGKV3,Kappa,,,,,,6n7j_A_B_D,False
8toa,H,L,0,C,protein,,hemagglutinin,VIRAL PROTEIN/IMMUNE SYSTEM,05/15/24,CryoEM structure of H7 hemagglutinin from A/Shanghai2/2013 H7N9 in complex with a human neutralizing antibody H7.HK2,Homo sapiens; Influenza A virus (A/Shanghai/02/2013(H7N9)),homo sapiens,homo sapiens,influenza a virus (a/shanghai/02/2013(h7n9)),"Morano, N.C., Becker, J.E., Wu, X., Shapiro, L.",3.69,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV2,Kappa,,,,,,8toa_H_L_C,False
8vuv,H,L,0,A,protein,,"glutamate receptor ionotropic, nmda 1",MEMBRANE PROTEIN/IMMUNE SYSTEM,09/11/24,Human GluN1-2B with Fab 007-168 Local refinement of ATD,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Michalski, K., Furukawa, H.",3.69,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGKV3,Kappa,,,,,,8vuv_H_L_A,False
7zwm,D,E,0,A,protein,,gametocyte surface protein p45/48,CELL ADHESION,05/19/22,Pfs48/45 central and C-terminal domains bound to Fab fragments of monoclonal antibody 10D8 and 32F3,Mus musculus; Plasmodium falciparum,mus musculus,mus musculus,plasmodium falciparum,"Ko, K.T., Lennartz, F.L., Higgins, M.K.",3.69,X-RAY DIFFRACTION,0.280,0.255,False,True,IGHV5,IGKV8,Kappa,,,,,,7zwm_D_E_A,False
5dmi,H,L,0,A,protein,,tumor necrosis factor receptor superfamily member 5,IMMUNE SYSTEM/SIGNALING PROTEIN,09/08/15,Structure of the extracellular domain of the CD40 in complex with CHI220 FAB,"MUS MUSCULUS, HOMO SAPIENS; HOMO SAPIENS","mus musculus, homo sapiens","mus musculus, homo sapiens",homo sapiens,"Sheriff, S.",3.69,X-RAY DIFFRACTION,0.207,0.168,False,True,IGHV9,IGKV5,Kappa,9.1e-10,-12.33407434312871,SPR,,TBD,5dmi_H_L_A,False
9ccw,C,B,0,A,protein,,type 1 fimbiral adhesin fimh,CELL ADHESION,07/02/25,CryoEM Structure of Escherichia coli FimCH in complex with 2C07 Fab,Escherichia coli UTI89; Mus musculus,mus musculus,mus musculus,escherichia coli uti89,"Lopatto, E.D.B., Hultgren, S.J.",3.69,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGKV6,Kappa,,,,,,9ccw_C_B_A,False
6m3c,K,J,0,G,protein,,vitamin k-dependent protein c heavy chain,BLOOD CLOTTING/IMMUNE SYSTEM,03/03/20,hAPC-h1573 Fab complex,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Wang, X., Wang, D., Zhao, X., Egner, U.",3.7,X-RAY DIFFRACTION,0.302,0.278,False,True,IGHV3,IGKV3,Kappa,,,,,,6m3c_K_J_G,False
8d0z,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,03/22/23,S728-1157 IgG in complex with SARS-CoV-2-6P-Mut7 Spike protein (focused refinement),Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Ozorowski, G., Torres, J.L., Ward, A.B.",3.7,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV3,Lambda,,,,,,8d0z_H_L_A,False
7m6g,H,L,0,C,protein,,spike glycoprotein,VIRAL PROTEIN/ANTIVIRAL PROTEIN,03/25/21,"Structure of the SARS-CoV-2 S 6P trimer in complex with the human neutralizing antibody Fab fragment, BG7-15",SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Barnes, C.O., Bjorkman, P.J.",3.7,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,7m6g_H_L_C,False
7pnm,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN,09/07/21,Human coronavirus OC43 spike glycoprotein ectodomain in complex with the 46C12 antibody Fab fragment,HUMAN CORONAVIRUS OC43; HOMO SAPIENS,homo sapiens,homo sapiens,human coronavirus oc43,"Hurdiss, D.L.",3.7,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV2,Kappa,,,,,,7pnm_H_L_A,False
9c2h,B,C,0,D,protein,,nucleoprotein,VIRAL PROTEIN,05/14/25,SARS-CoV-2 Nucleocapsid Dimerization Domain bound to Fab-NP1E9 and Fab-NP3B4,Mus sp.; Severe acute respiratory syndrome coronavirus 2,mus sp.,mus sp.,severe acute respiratory syndrome coronavirus2 ,"Landeras-Bueno, S., Hariharan, C., Diaz Avalos, R., Ollmann Saphire, E.",3.7,ELECTRON MICROSCOPY,,,False,True,IGHV6,IGKV4,Kappa,,,,,,9c2h_B_C_D,False
6eyo,I,M,0,B,protein,,immunoglobulin heavy constant epsilon,IMMUNE SYSTEM,11/13/17,Structure of extended IgE-Fc in complex with two anti-IgE Fabs,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Chen, J.B., Ramadani, F., Pang, M.O.Y., Beavil, R.L., Holdom, M.D., Mitropoulou, A.N., Beavil, A.J., Gould, H.J., Chang, T.W., Sutton, B.J., McDonnell, J.M., Davies, A.M.",3.7,X-RAY DIFFRACTION,0.288,0.247,False,True,IGHV1,IGKV3,Kappa,2e-11,-14.596006591193015,SPR,,TBD,6eyo_I_M_B,False
8us0,B,C,0,A,protein,,hemagglutinin,Viral Protein/IMMUNE SYSTEM,10/30/24,Human antibody S8V1-157 in complex with the A/American black duck/New Brunswick/00464/2010(H4N6) HA head domain,Homo sapiens; Influenza A virus,homo sapiens,homo sapiens,influenza a virus,"McCarthy, K.R.",3.7,X-RAY DIFFRACTION,0.293,0.246,False,True,IGHV1,IGKV2,Kappa,,,,,,8us0_B_C_A,False
6b70,C,D,0,A,protein,,insulin,HYDROLASE/IMMUNE SYSTEM/HORMONE,10/03/17,"Cryo-EM structure of human insulin degrading enzyme in complex with FAB H11-E heavy chain, FAB H11-E light chain and insulin",HOMO SAPIENS; MUS MUSCULUS,"mus musculus, homo sapiens","mus musculus, homo sapiens",homo sapiens,"Liang, W.G., Zhang, Z., Bailey, L.J., Kossiakoff, A.A., Tan, Y.Z., Wei, H., Carragher, B., Potter, S.C., Tang, W.J.",3.7,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,6b70_C_D_A,False
6nf2,W,X,0,R,protein,,envelope glycoprotein gp41,IMMUNE SYSTEM,12/18/18,Cryo-EM structure of vaccine-elicited antibody 0PV-c.01 in complex with HIV-1 Env BG505 DS-SOSIP and antibodies VRC03 and PGT122,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Gorman, J., Kwong, P.D.",3.7,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV2,Kappa,,,,,,6nf2_W_X_R,False
7q9m,E,F,0,B,protein,,surface glycoprotein,Viral Protein/Immune System,11/12/21,Beta-53 fab in complex with SARS-CoV-2 beta-Spike glycoprotein,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Duyvesteyn, H.M.E., Ren, J., Stuart, D.I.",3.7,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGKV3,Kappa,,,,,,7q9m_E_F_B,False
8vut,H,L,0,A,protein,,"glutamate receptor ionotropic, nmda 1",MEMBRANE PROTEIN/IMMUNE SYSTEM,09/11/24,Human GluN1-2A with IgG 008-218,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Michalski, K., Furukawa, H.",3.7,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV6,Lambda,,,,,,8vut_H_L_A,False
9c2h,I,J,0,D,protein,,nucleoprotein,VIRAL PROTEIN,05/14/25,SARS-CoV-2 Nucleocapsid Dimerization Domain bound to Fab-NP1E9 and Fab-NP3B4,Mus sp.; Severe acute respiratory syndrome coronavirus 2,mus sp.,mus sp.,severe acute respiratory syndrome coronavirus2 ,"Landeras-Bueno, S., Hariharan, C., Diaz Avalos, R., Ollmann Saphire, E.",3.7,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV6,Kappa,,,,,,9c2h_I_J_D,False
7zr7,H,L,0,B,protein,,"spike glycoprotein,fibritin",STRUCTURAL PROTEIN,05/03/22,OMI-42 FAB IN COMPLEX WITH SARS-COV-2 BETA SPIKE GLYCOPROTEIN,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; TEQUATROVIRUS T4; HOMO SAPIENS,homo sapiens,homo sapiens,"severe acute respiratory syndrome coronavirus2, tequatrovirus t4 ","Duyvesteyn, H.M.E., Ren, J., Stuart, D.I.",3.7,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV2,Lambda,,,,,,7zr7_H_L_B,False
7mzl,H,L,0,A,protein,,spike protein s1,VIRAL PROTEIN,05/24/21,SARS-CoV-2 receptor binding domain bound to Fab PDI 210,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Pymm, P., Chan, L.J., Dietrich, M.H., Tan, L.L., Tham, W.H.",3.7,X-RAY DIFFRACTION,0.256,0.222,False,True,IGHV4,IGKV3,Kappa,,,,,,7mzl_H_L_A,False
1afv,K,M,0,B,protein,,human immunodeficiency virus type 1 capsidprotein ,VIRAL PROTEIN/IMMUNE SYSTEM,03/14/97,HIV-1 CAPSID PROTEIN (P24) COMPLEX WITH FAB25.3,HUMAN IMMUNODEFICIENCY VIRUS 1; MUS MUSCULUS,mus musculus,mus musculus,human immunodeficiency virus 1,"Momany, C., Kovari, L.C., Prongay, A.J., Keller, W., Gitti, R.K., Lee, B.M., Gorbalenya, A.E., Tong, L., Mcclure, J., Ehrlich, L.S., Summers, M.F., Carter, C., Rossmann, M.G.",3.7,X-RAY DIFFRACTION,0.324,0.217,False,False,IGHV1,IGKV3,Kappa,,,,,,1afv_K_M_B,False
7pnq,D,F,0,B,protein,,spike glycoprotein,VIRAL PROTEIN,09/07/21,Human coronavirus OC43 spike glycoprotein ectodomain in complex with the 43E6 antibody Fab fragment,HOMO SAPIENS; HUMAN CORONAVIRUS OC43,homo sapiens,homo sapiens,human coronavirus oc43,"Hurdiss, D.L.",3.7,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV3,Kappa,,,,,,7pnq_D_F_B,False
6eyo,H,L,0,A,protein,,immunoglobulin heavy constant epsilon,IMMUNE SYSTEM,11/13/17,Structure of extended IgE-Fc in complex with two anti-IgE Fabs,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Chen, J.B., Ramadani, F., Pang, M.O.Y., Beavil, R.L., Holdom, M.D., Mitropoulou, A.N., Beavil, A.J., Gould, H.J., Chang, T.W., Sutton, B.J., McDonnell, J.M., Davies, A.M.",3.7,X-RAY DIFFRACTION,0.288,0.247,False,True,IGHV1,IGKV3,Kappa,2e-11,-14.596006591193015,SPR,,TBD,6eyo_H_L_A,False
6lbh,C,D,0,B,protein,,magnesium transporter mgte,TRANSPORT PROTEIN/IMMUNE SYSTEM,11/14/19,Cryo-EM structure of the MgtE Mg2+ channel under Mg2+-free conditions,THERMUS THERMOPHILUS HB8; MUS MUSCULUS,mus musculus,mus musculus,thermus thermophilus hb8,"Hattori, M., Jin, F.",3.7,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,6lbh_C_D_B,False
8qrf,H,L,0,E,protein,,spike protein s1,VIRAL PROTEIN,05/08/24,SARS-CoV-2 delta RBD complexed with XBB-6 and beta-49 Fabs,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, D., Ren, J., Stuart, D.I.",3.7,X-RAY DIFFRACTION,0.317,0.272,False,True,IGHV3,IGLV2,Lambda,,,,,,8qrf_H_L_E,False
7dkj,K,L,0,I,protein,,hemagglutinin,VIRAL PROTEIN,11/24/20,Hemagglutinin Influenza A virus (A/Okuda/1957(H2N2) bound with a neutralizing antibody,INFLUENZA A VIRUS (A/OKUDA/1957(H2N2)); MUS MUSCULUS,mus musculus,mus musculus,influenza a virus (a/okuda/1957(h2n2)),"Kamada, K., Shirouzu, M.",3.7,ELECTRON MICROSCOPY,,,False,True,IGHV7,IGKV12,Kappa,,,,,,7dkj_K_L_I,False
7mxe,R,W,0,J,protein,,envelope glycoprotein bg505 sosip.664 gp120,ANTIVIRAL PROTEIN/VIRAL PROTEIN,05/19/21,Ab1245 Fab in complex with BG505 SOSIP.664 and 8ANC195 Fab,HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1; MACACA MULATTA,macaca mulatta,macaca mulatta,human immunodeficiency virus 1,"Abernathy, M.E., Bjorkman, P.J.",3.7,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGLV9,Lambda,,,,,,7mxe_R_W_J,False
7e39,C,B,0,A,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,02/08/21,SARS-CoV-2 spike in complex with the Ab4 neutralizing antibody (State 3),SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Liu, C.",3.7,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7e39_C_B_A,False
8f0i,C,D,0,A,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,09/13/23,Crystal structure of SARS-CoV-2 receptor binding domain in complex with human antibody COVA309-22,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Yuan, M., Wilson, I.A.",3.7,X-RAY DIFFRACTION,0.275,0.226,False,True,IGHV3,IGKV1,Kappa,,,,,,8f0i_C_D_A,False
9l1o,H,L,0,E,protein,,butyrophilin subfamily 3 member a2,IMMUNE SYSTEM,12/17/25,"Cryo-EM structure of the ICT01-BTN3A1/BTN3A2 complex, local refinement",Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Xin, W.Z., Huang, B.D., Zhou, Q.",3.7,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV15,Kappa,,,,,,9l1o_H_L_E,False
7t4g,H,L,0,A,protein,,envelope glycoprotein gp120,VIRAL PROTEIN/IMMUNE SYSTEM,10/19/22,The Envelope Glycoprotein SIVmac239.K180S SOSIP trimer in complex with 3 copies of the neutralizing antibody K11,Macaca mulatta; Simian immunodeficiency virus,macaca mulatta,macaca mulatta,simian immunodeficiency virus,"Berndsen, Z.T.",3.7,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV1,Kappa,,,,,,7t4g_H_L_A,False
7nd3,H,L,0,B,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,01/30/21,EM structure of SARS-CoV-2 Spike glycoprotein in complex with COVOX-40 Fab,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Duyvesteyn, H.M.E., Zhao, Y., Ren, J., Stuart, D.",3.7,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7nd3_H_L_B,False
9px5,H,L,0,A,protein,,"maltose/maltodextrin-binding periplasmic protein,triggeringreceptor expressed on myeloid cells 2 ",IMMUNE SYSTEM,09/10/25,Crystal structure of Fab 7268 in complex with MBP-TREM2 Ig domain fusion,Escherichia coli; Homo sapiens,homo sapiens,homo sapiens,"escherichia coli, homo sapiens","Arndt, J.W., Chao, Q., Cooke, H.A., Almeida, A.D.S.",3.7,X-RAY DIFFRACTION,0.268,0.248,False,True,IGHV4,IGKV1,Kappa,,,,,,9px5_H_L_A,False
6nf5,O,P,0,J,protein,,hiv-1 env bg505 md64 n332-gt5 sosip gp120,VIRAL PROTEIN/immune system,12/18/18,BG505 MD64 N332-GT5 SOSIP trimer in complex with BG18-like precursor HMP1 fragmentantigen binding and base-binding RM20A3 fragment antigen binding,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS; MACACA MULATTA,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Ozorowski, G., Torres, J.L., Steichen, J.M., Schief, W.R., Ward, A.B.",3.71,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGLV3,Lambda,,,,,,6nf5_O_P_J,False
8dyw,M,N,0,I,protein,,circumsporozoite protein,IMMUNE SYSTEM,08/02/23,Cryo-EM structure of 239 Fab in complex with recombinant shortened Plasmodium falciparum circumsporozoite protein (rsCSP),Homo sapiens; Plasmodium falciparum,homo sapiens,homo sapiens,plasmodium falciparum,"Martin, G.M., Ward, A.B.",3.72,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8dyw_M_N_I,False
8grr,H,L,0,2,protein,,a/wh/cha/09 vp2,VIRUS,10/11/23,Complex of FMDV A/WH/CHA/09 and bovine neutralizing scFv antibody W125,Bos taurus; Foot-and-mouth disease virus A,bos taurus,bos taurus,foot-and-mouth disease virus a,"He, Y., Kun, L.",3.72,ELECTRON MICROSCOPY,,,True,True,IGHV1,IGLV1,Lambda,,,,,,8grr_H_L_2,False
7lss,H,L,0,B,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,02/18/21,Cryo-EM structure of the SARS-CoV-2 spike glycoprotein bound to Fab 2-7,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Rapp, M., Shapiro, L.",3.72,ELECTRON MICROSCOPY,,,False,True,IGHV2,IGLV2,Lambda,,,,,,7lss_H_L_B,False
7lf2,K,L,0,J,protein,,arginase-1,HYDROLASE/IMMUNE SYSTEM,01/15/21,Trimeric human Arginase 1 in complex with mAb4,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Gomez-Llorente, Y., Scapin, G., Palte, R.L.",3.72,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,7lf2_K_L_J,False
7ll1,H,L,0,A,protein,,envelope glycoprotein gp120,IMMUNE SYSTEM/VIRAL PROTEIN,02/03/21,Cryo-EM structure of BG505 DS-SOSIP in complex with glycan276-dependent broadly neutralizing antibody VRC40.01 Fab,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Manne, K., Acharya, P.",3.73,ELECTRON MICROSCOPY,,,False,True,unknown,unknown,unknown,,,,,,7ll1_H_L_A,False
9ms8,H,L,0,A,protein,,protein patched homolog 1,MEMBRANE PROTEIN/IMMUNE SYSTEM,04/02/25,PTCH1 in complex with Fab6H3,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Hu, Q., Qi, X., Li, X.",3.73,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGKV4,Kappa,,,,,,9ms8_H_L_A,False
6vca,P,O,0,D,protein,,"5'-nucleotidase, ecto (cd73), isoform cra_a",IMMUNE SYSTEM,12/20/19,TB38 complex,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Zhou, Y.F., Lord, D.M.",3.73,X-RAY DIFFRACTION,0.264,0.224,False,True,IGHV3,IGLV8,Lambda,,,,,,6vca_P_O_D,False
7ll2,H,L,0,A,protein,,envelope glycoprotein gp120,IMMUNE SYSTEM/VIRAL PROTEIN,02/03/21,Cryo-EM structure of BG505 DS-SOSIP in complex with Glycan276-Dependent Broadly Neutralizing Antibody VRC33.01 Fab,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Manne, K., Acharya, P.",3.73,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV1,Kappa,,,,,,7ll2_H_L_A,False
6vca,K,J,0,C,protein,,"5'-nucleotidase, ecto (cd73), isoform cra_a",IMMUNE SYSTEM,12/20/19,TB38 complex,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Zhou, Y.F., Lord, D.M.",3.73,X-RAY DIFFRACTION,0.264,0.224,False,True,IGHV3,IGLV8,Lambda,,,,,,6vca_K_J_C,False
9mq8,J,N,0,E,protein,,hemagglutinin ha1 chain,VIRAL PROTEIN/IMMUNE SYSTEM,08/13/25,Cryo-EM structure of hemagglutinin H5N1 in complex with Fab 310-33-1_H02,Homo sapiens; Influenza A virus,homo sapiens,homo sapiens,influenza a virus,"Malla, T.N., Tsybovsky, Y., Zhou, T.",3.73,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV2,Lambda,,,,,,9mq8_J_N_E,False
4rau,N,M,0,O,protein,,platelet factor 4,IMMUNE SYSTEM,09/11/14,crystal structure of RTOFab in complex with human PF4,MUS MUSCULUS; HOMO SAPIENS,mus musculus,mus musculus,homo sapiens,"Cai, Z., Zhu, Z., Liu, Q., Greene, M.I.",3.74,X-RAY DIFFRACTION,0.284,0.243,False,True,IGHV5,IGKV10,Kappa,,,,,,4rau_N_M_O,False
8tr3,H,L,0,A,protein,,cne40 sosip envelope glycoprotein gp120,IMMUNE SYSTEM/VIRAL PROTEIN,06/19/24,Cryo-EM structure of HmAb64 scFv in complex with CNE40 SOSIP trimer,Homo sapiens; Human immunodeficiency virus 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Chan, K.-W., Kong, X.P.",3.74,ELECTRON MICROSCOPY,,,True,True,IGHV1,IGKV1,Kappa,,,,,,8tr3_H_L_A,False
8gnh,H,L,0,B,protein,,spike glycoprotein,VIRAL PROTEIN/ANTIVIRAL PROTEIN,08/30/23,Complex structure of BD-218 and Spike protein,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Wang, B., Xu, H., Su, X.D.",3.74,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV3,Kappa,,,,,,8gnh_H_L_B,False
8y4c,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,09/04/24,BA.2.86 S-trimer in complex with Nab XGv280,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhu, Q., Liu, P.",3.75,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGLV1,Lambda,,,,,,8y4c_H_L_A,False
9v0n,H,F,0,D,protein,,rsv pre-fusion protein,VIRAL PROTEIN,12/31/25,Cryo-EM structure of RSV pre-F in complex with antibody CNR2042,Homo sapiens; Respiratory syncytial virus A2,homo sapiens,homo sapiens,respiratory syncytial virus a2,"Zhai, H., Deng, J., Yu, W.",3.75,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV1,Lambda,,,,,,9v0n_H_F_D,False
7eo0,H,L,0,3,protein,,o/tibet/99 vp3,VIRUS,04/21/21,FOOT AND MOUTH DISEASE VIRUS O/TIBET/99-BOUND THE SINGLE CHAIN FRAGMEN ANTIBODY C4,BOS TAURUS; FOOT-AND-MOUTH DISEASE VIRUS,bos taurus,bos taurus,foot-and-mouth disease virus,"He, Y., Li, K.",3.75,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV1,Lambda,,,,,,7eo0_H_L_3,False
8tgv,E,F,0,A,protein,,envelope glycoprotein e2,ANTIVIRAL PROTEIN,07/24/24,CryoEM structure of Fab HC84.26-HCV E2 complex,Hepacivirus C; Homo sapiens,homo sapiens,homo sapiens,hepacivirus c,"Shahid, S., Liqun, J., LIu, Y., Hasan, S.S., Mariuzza, R.A.",3.75,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV3,Lambda,,,,,,8tgv_E_F_A,False
5tqq,I,M,0,B,protein,,chloride channel protein,TRANSPORT PROTEIN,10/24/16,"Cryo-electron microscopy structure of a bovine CLC-K chloride channel, main (class 1) conformation",MUS MUSCULUS; BOS TAURUS,mus musculus,mus musculus,bos taurus,"Park, E., MacKinnon, R.",3.76,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV6,Kappa,,,,,,5tqq_I_M_B,False
8dxs,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,12/07/22,Cryo-EM structure of RBD-directed neutralizing antibody P2B4 in complex with prefusion SARS-CoV-2 spike glycoprotein,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Reddem, E.R., Shapiro, L.",3.76,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8dxs_H_L_A,False
7eya,H,L,0,R,protein,,spike glycoprotein,VIRAL PROTEIN,05/30/21,Local CryoEM structure of the SARS-CoV-2 S6PV2 in complex with BD-804 Fab,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Du, S., Xiao, J.",3.77,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7eya_H_L_R,False
9xgo,H,L,0,N,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,12/03/25,Omicron-specific ultra-potent SARS-CoV-2 neutralizing antibodies targeting the N1/N2 loop of Spike N-terminal domain,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Li, Z.Q., Niu, X.",3.77,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV2,Lambda,,,,,,9xgo_H_L_N,False
8jj1,E,F,0,B,protein,,"glutamate receptor ionotropic, nmda 1",MEMBRANE PROTEIN,06/05/24,Cryo-EM structure of GluN1-2A NMDAR in complex with human Fab2G7 in two fab conformation,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Wang, H., Zhu, S.",3.77,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,8jj1_E_F_B,False
8dtk,C,B,0,A,protein,,spike protein s1,Viral Protein/Immune System,08/02/23,Structure of RBD directed antibody DH1047 in complex with SARS-CoV-2 spike: Local refinement of RBD-Fab interace,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"May, A.J., Manne, K., Acharya, P.",3.77,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV4,Kappa,,,,,,8dtk_C_B_A,False
6att,H,L,0,A,protein,,receptor tyrosine-protein kinase erbb-2,IMMUNE SYSTEM,08/29/17,39S Fab bound to HER2 ecd,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Oganesyan, V.Y., Dall'Acqua, W.F.",3.77,X-RAY DIFFRACTION,0.289,0.251,False,True,IGHV3,IGKV2,Kappa,,,,,,6att_H_L_A,False
8qzr,A,B,0,E,protein,,spike protein s1,VIRAL PROTEIN,04/03/24,SARS-CoV-2 delta RBD complexed with BA.4/5-9 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, D., Ren, J., Stuart, D.I.",3.77,X-RAY DIFFRACTION,0.300,0.251,False,True,IGHV1,IGKV3,Kappa,,,,,,8qzr_A_B_E,False
8qzr,H,L,0,C,protein,,spike protein s1,VIRAL PROTEIN,04/03/24,SARS-CoV-2 delta RBD complexed with BA.4/5-9 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, D., Ren, J., Stuart, D.I.",3.77,X-RAY DIFFRACTION,0.300,0.251,False,True,IGHV1,IGKV3,Kappa,,,,,,8qzr_H_L_C,False
9v0s,G,I,0,C,protein,,rsv pre-fusion protein,VIRAL PROTEIN,12/31/25,Cryo-EM structure of RSV pre-F in complex with antibody CNR2047,Homo sapiens; Respiratory syncytial virus A2,homo sapiens,homo sapiens,respiratory syncytial virus a2,"Zhai, H., Deng, J., Yu, W.",3.78,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV1,Lambda,,,,,,9v0s_G_I_C,False
5nj3,C,D,0,B,protein,,atp-binding cassette sub-family g member 2,TRANSPORT PROTEIN,03/28/17,Structure of an ABC transporter: complete structure,MUS MUSCULUS; HOMO SAPIENS,mus musculus,mus musculus,homo sapiens,"Taylor, N.M.I., Manolaridis, I., Jackson, S.M., Kowal, J., Stahlberg, H., Locher, K.P.",3.78,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV13,Kappa,,,,,,5nj3_C_D_B,False
9mr2,A,B,0,C,protein,,spike protein s2,VIRUS,11/26/25,SARS-CoV-2 S2 monomer in complex with NICA01A-1401 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Park, S., Bangaru, B., Ward, A.B.",3.79,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV1,Lambda,,,,,,9mr2_A_B_C,False
7n4m,H,L,0,A,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,06/04/21,Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing human antibody WRAIR-2151.,HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Sankhala, R.S., Joyce, M.G.",3.79,X-RAY DIFFRACTION,0.317,0.258,False,True,IGHV4,IGLV6,Lambda,,,,,,7n4m_H_L_A,False
6jht,E,D,0,C,protein,,vp3,VIRUS,02/19/19,The cryo-EM structure of HAV bound to a neutralizing antibody-F9,HUMAN HEPATITIS A VIRUS HU/AUSTRALIA/HM175/1976,human hepatitis a virushu/australia/hm175/1976 ,human hepatitis a virushu/australia/hm175/1976 ,human hepatitis a virushu/australia/hm175/1976 ,"Cao, L., Liu, P., Yang, P., Gao, Q., Li, H., Sun, Y., Zhu, L., Lin, J., Su, D., Rao, Z., Wang, X.",3.79,ELECTRON MICROSCOPY,,,False,False,IGHV5,IGKV4,Kappa,,,,,,6jht_E_D_C,False
5uoe,V,W,0,E,protein,,insulin-degrading enzyme,Hydrolase/Immune System,01/31/17,Crystal Structure Analysis of Elbow-Engineered-Fab-Bound Human Insulin Degrading Enzyme (IDE),HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Liang, W.G., Bailey, L., Kossiakoff, T., Tang, W.J.",3.8,X-RAY DIFFRACTION,0.270,0.220,False,True,IGHV3,IGKV1,Kappa,,,,,,5uoe_V_W_E,False
8ulu,K,G,0,E,protein,,envelope glycoprotein gp120,Viral Protein/Immune System,04/16/25,Cryo-EM structure of the BG505 SOSIPv2 in complex with bNAb 04_A06 and PGDM1400 Fabs,Homo sapiens; Human immunodeficiency virus 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"DeLaitsch, A.T., Bjorkman, P.J.",3.8,ELECTRON MICROSCOPY,,,False,True,unknown,IGKV2,Kappa,,,,,,8ulu_K_G_E,False
7d0d,G,F,0,B,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,09/09/20,S protein of SARS-CoV-2 in complex bound with P5A-3C12_2B,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Yan, R.H., Wang, R.K., Ju, B., Yu, J.F., Zhang, Y.Y., Liu, N., Wang, H.W., Wang, X.Q., Zhang, L.Q., Zhou, Q.",3.8,ELECTRON MICROSCOPY,,,False,True,IGHV2,IGKV4,Kappa,,,,,,7d0d_G_F_B,False
7akj,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN,10/01/20,Structure of the SARS-CoV spike glycoprotein in complex with the 47D11 neutralizing antibody Fab fragment,SARS CORONAVIRUS WH20; HOMO SAPIENS,homo sapiens,homo sapiens,sars coronavirus wh20,"Fedry, J., Hurdiss, D.L., Wang, C., Li, W., Obal, G., Drulyte, I., Howes, S.C., van Kuppeveld, F.J.M., Foerster, F., Bosch, B.J.",3.8,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV3,Kappa,,,,,,7akj_H_L_A,False
8gpx,H,L,0,E,protein,,envelope protein,ANTIVIRAL PROTEIN,11/02/22,YFV_E_YD73Fab_postfusion,Homo sapiens; Yellow fever virus,homo sapiens,homo sapiens,yellow fever virus,"Li, Y., Wu, L., Chai, Y., Qi, J., Yan, J., Gao, G.F.",3.8,X-RAY DIFFRACTION,0.306,0.261,False,True,IGHV1,IGKV3,Kappa,,,,,,8gpx_H_L_E,False
7kej,H,K,0,B,protein,,virion spike glycoprotein,VIRAL PROTEIN/Immune System,10/11/20,BDBV-289 bound to EBOV GPdMuc Makona,EBOLA VIRUS; HOMO SAPIENS; ZAIRE EBOLAVIRUS,homo sapiens,homo sapiens,ebola virus,"Murin, C.D., Ward, A.B.",3.8,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV3,Lambda,,,,,,7kej_H_K_B,False
6utk,H,L,0,G,protein,,envelope glycoprotein gp120,VIRAL PROTEIN/IMMUNE SYSTEM,10/29/19,Crystal structure of 438-B11 Fab in complex with an uncleaved prefusion optimized (UFO) soluble BG505 trimer and Fab 35O22 at 3.80 Angstrom,HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Kumar, S., Wilson, I.A.",3.8,X-RAY DIFFRACTION,0.317,0.299,False,True,unknown,IGKV3,Kappa,,,,,,6utk_H_L_G,False
6cde,h,l,0,d,protein,,unknown,VIRAL PROTEIN,02/08/18,"Cryo-EM structure at 3.8 A resolution of vaccine-elicited antibody vFP20.01 in complex with HIV-1 Env BG505 DS-SOSIP, and antibodies VRC03 and PGT122",HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Acharya, P., Xu, K., Liu, K., Carragher, B., Potter, C.S., Kwong, P.D.",3.8,ELECTRON MICROSCOPY,,,False,False,IGHV1,IGKV1,Kappa,,,,,,6cde_h_l_d,False
4ffz,Z,Y,0,X,protein,,envelope protein e,IMMUNE SYSTEM/VIRAL PROTEIN,06/01/12,Crystal Structure of DENV1-E111 fab fragment bound to DENV-1 DIII (Western Pacific-74 strain).,DENGUE VIRUS 1; MUS MUSCULUS,mus musculus,mus musculus,dengue virus 1,"Austin, S.K., Nelson, C.A., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID)",3.8,X-RAY DIFFRACTION,0.278,0.237,False,False,IGHV1,IGKV3,Kappa,4.16e-07,-8.705114208770938,SPR,,TBD,4ffz_Z_Y_X,False
6myy,G,F,0,E,protein,,426c ds-sosip d3,VIRAL PROTEIN/IMMUNE SYSTEM,11/02/18,"Germline VRC01 antibody recognition of a modified clade C HIV-1 envelope trimer, 3 Fabs bound, sharpened map",HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Borst, A.J., Weidle, C.E., Gray, M.D., Frenz, B., Snijder, J., Joyce, M.G., Georgiev, I.S., Stewart-Jones, G.B.E., Kwong, P.D., McGuire, A.T., DiMaio, F., Stamatatos, L., Pancera, M., Veesler, D.",3.8,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,6myy_G_F_E,False
9ccu,C,B,0,A,protein,,type 1 fimbiral adhesin fimh,CELL ADHESION,07/02/25,CryoEM Structure of Escherichia coli FimCH in complex with F7 Fab,Escherichia coli UTI89; Mus musculus,mus musculus,mus musculus,escherichia coli uti89,"Lopatto, E.D.B., Hultgren, S.J.",3.8,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV4,Kappa,,,,,,9ccu_C_B_A,False
7dk4,e,f,0,C,protein,,spike glycoprotein,VIRAL PROTEIN,11/23/20,"S-2H2-F3a structure, two RBDs are up and one RBD is down, each RBD binds with a 2H2 Fab.",SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; MUS MUSCULUS,mus musculus,mus musculus,severe acute respiratory syndrome coronavirus2 ,"Cong, Y., Wang, Y.F.",3.8,ELECTRON MICROSCOPY,,,False,False,IGHV2,IGKV3,Kappa,,,,,,7dk4_e_f_C,False
5xs7,H,L,0,A,protein,,genome polyprotein,VIRUS,06/12/17,Structure of Coxsackievirus A6 (CVA6) virus A-particle in complex with the neutralizing antibody fragment 1D5,MUS MUSCULUS; COXSACKIEVIRUS A6,mus musculus,mus musculus,coxsackievirus a6,"Zheng, Q.B., He, M.Z., Xu, L.F., Yu, H., Li, S.W., Cheng, T.",3.8,ELECTRON MICROSCOPY,,,False,False,IGHV5,IGKV6,Kappa,,,,,,5xs7_H_L_A,False
7e7e,H,L,0,A,protein,,processed angiotensin-converting enzyme 2,ANTIVIRAL PROTEIN,02/26/21,The co-crystal structure of ACE2 with Fab,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Xiao, J.Y., Zhang, Y.",3.8,X-RAY DIFFRACTION,0.327,0.276,False,True,IGHV3,IGKV1,Kappa,,,,,,7e7e_H_L_A,False
6mph,3,4,0,E,protein,,envelope glycoprotein gp41,VIRAL PROTEIN,10/06/18,"Cryo-EM structure at 3.8 A resolution of HIV-1 fusion peptide-directed antibody, DF1W-a.01, elicited by vaccination of Rhesus macaques, in complex with stabilized HIV-1 Env BG505 DS-SOSIP, which was also bound to antibodies VRC03 and PGT122",MACACA MULATTA; HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,macaca mulatta,macaca mulatta,human immunodeficiency virus 1,"Acharya, P., Xu, K., Kwong, P.D.",3.8,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV2,Kappa,,,,,,6mph_3_4_E,False
9ook,H,L,0,h,protein,,unknown,VIRAL PROTEIN/IMMUNE SYSTEM,11/05/25,Cryo-EM structure of vaccine-elicited antibody T3_QB_G12 in complex with HIV Env trimer Q23-APEX-GT1,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Roark, R.S., Shapiro, L.S., Kwong, P.D.",3.8,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV4,Kappa,,,,,,9ook_H_L_h,False
7kfh,I,L,0,C,protein,,virion spike glycoprotein 1,VIRAL PROTEIN/IMMUNE SYSTEM,10/13/20,"Ebola virus GP (mucin deleted, Makona strain) bound to antibody Fab EBOV-437",EBOLA VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,ebola virus,"Murin, C.D., Ward, A.B.",3.8,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,7kfh_I_L_C,False
9mew,E,D,0,B,protein,,junv gp1,VIRAL PROTEIN/IMMUNE SYSTEM,07/23/25,"JUNV GP1, GP2, SSP and CR1-28 Fab complex in a pseudotyped virus membrane",Homo sapiens; Mammarenavirus juninense,homo sapiens,homo sapiens,mammarenavirus juninense,"Taylor, L.J., Sawaya, M.R., Castells-Graells, R., Rodriguez, J.A.",3.8,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,9mew_E_D_B,False
9fq3,I,J,0,A,protein,,secreted protein orf2,VIRAL PROTEIN,05/14/25,HEV ORF2 protein in complex with Fabs Es1.114 and Es5.127,Hepatitis E virus; Homo sapiens,homo sapiens,homo sapiens,hepatitis e virus,"Baquero, E., Molinos, L., Mouquet, H.",3.8,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,9fq3_I_J_A,False
9n0d,E,D,0,B,protein,,pre-glycoprotein polyprotein gp complex,VIRAL PROTEIN,07/23/25,"JUNV GP1, GP2, SSP complex with neutralizing antibody in a pseudotyped virus membrane",Mammarenavirus juninense; Mus musculus,mus musculus,mus musculus,mammarenavirus juninense,"Taylor, L.J., Sawaya, M.R., Castells-Graells, R., Rodriguez, J.A.",3.8,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGKV4,Kappa,,,,,,9n0d_E_D_B,False
9fq3,E,F,0,A,protein,,secreted protein orf2,VIRAL PROTEIN,05/14/25,HEV ORF2 protein in complex with Fabs Es1.114 and Es5.127,Hepatitis E virus; Homo sapiens,homo sapiens,homo sapiens,hepatitis e virus,"Baquero, E., Molinos, L., Mouquet, H.",3.8,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGLV1,Lambda,,,,,,9fq3_E_F_A,False
7bu8,H,L,0,A,protein,,genome polyprotein,VIRUS,05/13/20,Cryo-EM structure of zika virus complexed with Fab SIgN-3C at pH 6.5,HOMO SAPIENS; ZIKA VIRUS ZIKV/H. SAPIENS/FRENCHPOLYNESIA/10087PF/2013,homo sapiens,homo sapiens,zika virus zikv/h.sapiens/frenchpolynesia/10087pf/2013 ,"Zhang, S., Chew, S.V., Lim, X.N., Ng, T.S., Kostyuchenko, V.A., Lok, S.M.",3.8,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,7bu8_H_L_A,False
7sq1,H,L,0,E,protein,,envelope glycoprotein gp160,Viral Protein/Immune System,11/04/21,BG505.MD39TS Env trimer in complex with Fab from antibody C05,Human immunodeficiency virus 1; Mus musculus,mus musculus,mus musculus,human immunodeficiency virus 1,"Moore, A., Du, J., Xu, Z., Walker, S., Kulp, D.W., Pallesen, J.",3.8,ELECTRON MICROSCOPY,,,False,True,IGHV6,IGKV3,Kappa,,,,,,7sq1_H_L_E,False
8gh4,H,L,0,E,protein,,disintegrin and metalloproteinase domain-containing protein10 ,IMMUNE SYSTEM,08/30/23,Complex of Adam 10 disentegrin cysteine rich domains with human monoclonal antibody,Bos taurus; Homo sapiens,homo sapiens,homo sapiens,bos taurus,"Nikolov, D.B., Saha, N., Xu, K., Goldgur, Y.",3.8,X-RAY DIFFRACTION,0.312,0.288,False,True,IGHV3,IGKV1,Kappa,,,,,,8gh4_H_L_E,False
7swp,H,L,0,A,protein,,spike protein s1,VIRAL PROTEIN/Immune System,11/20/21,G32Q4 Fab in complex with SARS-CoV-2 Spike 6P (RBD local reconstruction),SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Windsor, I.W., Tong, P., Wesemann, D.R., Harrison, S.C.",3.8,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV1,Lambda,,,,,,7swp_H_L_A,False
8tzy,A,B,0,C,protein,,envelope glycoprotein e2,VIRAL PROTEIN/IMMUNE SYSTEM,09/04/24,CryoEM structure of non-neutralizing bivalent antibody CBH-4B in complex with Hepatitis C virus envelope glycoprotein E2,Hepatitis C virus (isolate 1); Homo sapiens,homo sapiens,homo sapiens,hepatitis c virus (isolate 1),"Shahid, S., Liqun, J., Liu, Y., Hasan, S.S., Mariuzza, R.A.",3.8,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,8tzy_A_B_C,False
2r69,H,L,0,A,protein,,major envelope protein e,viral protein/Immune system,09/05/07,Crystal structure of Fab 1A1D-2 complexed with E-DIII of Dengue virus at 3.8 angstrom resolution,DENGUE VIRUS 2 THAILAND/16681/84; MUS MUSCULUS,mus musculus,mus musculus,dengue virus 2 thailand/16681/84,"Lok, S.M., Kostyuchenko, V.K., Nybakken, G.E., Holdaway,H.A, Battisti, A.J., Sukupolvi-petty, S., Sedlak, D., Fremont, D.H., Chipman, P.R., Roehrig, J.T., Diamond, M.S., Kuhn, R.J., Rossmann, M.G.",3.8,X-RAY DIFFRACTION,0.363,0.313,False,True,IGHV14,IGKV3,Kappa,,,,,,2r69_H_L_A,False
7k8v,M,N,0,C,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,09/27/20,"Structure of the SARS-CoV-2 S 2P trimer in complex with the human neutralizing antibody Fab fragment, C110",SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Dam, K.A., Barnes, C.O., Bjorkman, P.J.",3.8,ELECTRON MICROSCOPY,,,False,True,IGHV5,IGKV1,Kappa,,,,,,7k8v_M_N_C,False
6ch7,Q,R,0,G,protein,,envelope glycoprotein gp120,IMMUNE SYSTEM,02/22/18,XFEL crystal structure of a natively-glycosylated BG505 SOSIP.664 HIV-1 Envelope Trimer in complex with the broadly-neutralizing antibodies BG18 and 35O22,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Barnes, C.O., Bjorkman, P.J.",3.8,X-RAY DIFFRACTION,0.262,0.232,False,True,unknown,IGLV3,Lambda,,,,,,6ch7_Q_R_G,False
8uzc,H,L,0,A,protein,,hemagglutinin,IMMUNE SYSTEM,11/27/24,Structure of UT14 Fab in complex with the head domain of H3 (A/Singapore/INFIMH-16-0019/2016),Homo sapiens; Influenza A virus,homo sapiens,homo sapiens,influenza a virus,"Park, J., Georgiou, G.",3.8,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV3,Kappa,,,,,,8uzc_H_L_A,False
9js4,B,A,0,C,protein,,spike glycoprotein,VIRAL PROTEIN,01/22/25,Cryo-EM structure of neutralizing antibody 8G3 in complex with BA.1 RBD,Homo heidelbergensis; Homo sapiens; Severe acute respiratory syndrome coronavirus,homo heidelbergensis,homo sapiens,severe acute respiratory syndrome coronavirus,"Li, J., Li, H.",3.8,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,9js4_B_A_C,False
7y0n,F,K,0,D,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,09/13/23,SARS-CoV-2 WT Spike in complex with R15 Fab and P14 Nanobody,Homo sapiens; Severe acute respiratory syndrome coronavirus 2; Vicugna pacos,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Wang, L.",3.8,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,7y0n_F_K_D,False
8qpr,E,D,0,A,protein,,"spike glycoprotein,fibritin",VIRAL PROTEIN,01/31/24,SARS-CoV-2 S protein bound to human neutralising antibody UZGENT_G5,Homo sapiens; Severe acute respiratory syndrome coronavirus 2; Tequatrovirus T4,homo sapiens,homo sapiens,"severe acute respiratory syndrome coronavirus2, tequatrovirus t4 ","Remaut, H., Reiter, D., Vandenkerckhove, L., Acar, D.D., Witkowski, W., Gerlo, S.",3.8,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV2,Lambda,,,,,,8qpr_E_D_A,False
8jiz,E,F,0,B,protein,,"glutamate receptor ionotropic, nmda 1",MEMBRANE PROTEIN,06/05/24,Cryo-EM structure of GluN1-2A NMDAR in complex with human Fab5F6 in two fab bind conformation,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Wang, H., Zhu, S.",3.8,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8jiz_E_F_B,False
8s2e,H,L,0,C,protein,,envelope glycoprotein gp120,VIRAL PROTEIN,01/08/09,Fab4251-DS-SOSIP complex,HIV whole-genome vector AA1305#18; Homo sapiens,homo sapiens,homo sapiens,hiv whole-genome vector aa1305#18,"Nortier, P., Perez, L.",3.8,ELECTRON MICROSCOPY,,,False,True,unknown,IGKV1,Kappa,,,,,,8s2e_H_L_C,False
7vng,H,L,0,D,protein,,spike glycoprotein s1,VIRAL PROTEIN/IMMUNE SYSTEM,10/26/22,Crystal structure of human coronavirus 229E spike protein receptor-binding domain in complex with S11 Fab,Homo sapiens; Human coronavirus 229E,homo sapiens,homo sapiens,human coronavirus 229e,"Xiang, J.C., Zhao, W.W., Yang, B.",3.8,X-RAY DIFFRACTION,0.318,0.280,False,True,IGHV3,IGKV1,Kappa,,,,,,7vng_H_L_D,False
7wp6,D,C,0,F,protein,,spike protein s1,IMMUNE SYSTEM/VIRAL PROTEIN,03/01/23,Cryo-EM structure of SARS-CoV-2 recombinant spike protein STFK in complex with three neutralizing antibodies,Mus musculus; Severe acute respiratory syndrome coronavirus 2,mus musculus,mus musculus,severe acute respiratory syndrome coronavirus2 ,"Zheng, Q., Sun, H., Yuan, Q., Li, S., Xia, N.",3.81,ELECTRON MICROSCOPY,,,False,False,IGHV1,IGKV6,Kappa,,,,,,7wp6_D_C_F,False
7m30,M,N,0,C,protein,,envelope protein ul128,VIRAL PROTEIN/IMMUNE SYSTEM,03/17/21,"Cryo-EM structure of the HCMV pentamer bound by antibodies 1-103, 1-32 and 2-25",HUMAN CYTOMEGALOVIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,human cytomegalovirus,"Wrapp, D., McLellan, J.S.",3.81,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV1,Kappa,,,,,,7m30_M_N_C,False
8eji,H,L,0,A,protein,,glycoprotein g2,VIRAL PROTEIN,06/07/23,Lassa virus glycoprotein complex (Josiah) bound to 19.7E Fab,Homo sapiens; Lassa mammarenavirus,homo sapiens,homo sapiens,lassa mammarenavirus,"Perrett, H.R., Ward, A.B.",3.81,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8eji_H_L_A,False
7wp6,B,I,0,F,protein,,spike protein s1,IMMUNE SYSTEM/VIRAL PROTEIN,03/01/23,Cryo-EM structure of SARS-CoV-2 recombinant spike protein STFK in complex with three neutralizing antibodies,Mus musculus; Severe acute respiratory syndrome coronavirus 2,mus musculus,mus musculus,severe acute respiratory syndrome coronavirus2 ,"Zheng, Q., Sun, H., Yuan, Q., Li, S., Xia, N.",3.81,ELECTRON MICROSCOPY,,,False,False,IGHV1,IGKV8,Kappa,,,,,,7wp6_B_I_F,False
8d4r,D,E,0,B,protein,,envelope glycoprotein gp41,VIRAL PROTEIN/IMMUNE SYSTEM,12/13/23,Crystal Structure of Mosaic HIV-1 Envelope (MosM3.2) in Complex with antibodies PGT124 and 35O22 at 3.8 Angstrom,Homo sapiens; Human immunodeficiency virus 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Xian, Y., Wilson, A.",3.81,X-RAY DIFFRACTION,0.296,0.277,False,True,unknown,unknown,unknown,,,,,,8d4r_D_E_B,False
7m30,H,L,0,B,protein,,envelope glycoprotein l,VIRAL PROTEIN/IMMUNE SYSTEM,03/17/21,"Cryo-EM structure of the HCMV pentamer bound by antibodies 1-103, 1-32 and 2-25",HUMAN CYTOMEGALOVIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,human cytomegalovirus,"Wrapp, D., McLellan, J.S.",3.81,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7m30_H_L_B,False
8vuy,J,K,0,C,protein,,"glutamate receptor ionotropic, nmda 1",MEMBRANE PROTEIN,09/11/24,Rat GluN1-2B with Fab 003-102,Homo sapiens; Rattus norvegicus,homo sapiens,homo sapiens,rattus norvegicus,"Michalski, K., Furukawa, H.",3.81,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGLV6,Lambda,,,,,,8vuy_J_K_C,False
7wp6,H,L,0,F,protein,,spike protein s1,IMMUNE SYSTEM/VIRAL PROTEIN,03/01/23,Cryo-EM structure of SARS-CoV-2 recombinant spike protein STFK in complex with three neutralizing antibodies,Mus musculus; Severe acute respiratory syndrome coronavirus 2,mus musculus,mus musculus,severe acute respiratory syndrome coronavirus2 ,"Zheng, Q., Sun, H., Yuan, Q., Li, S., Xia, N.",3.81,ELECTRON MICROSCOPY,,,False,False,IGHV1,IGKV4,Kappa,,,,,,7wp6_H_L_F,False
8e1p,H,L,0,G,protein,,bg505-sosip.v4.1-gt1.2gp120,VIRAL PROTEIN/IMMUNE SYSTEM,01/08/09,Crystal structure of BG505 SOSIP.v4.1-GT1.2 trimer in complex with gl-PGV20 and PGT124 Fabs,Homo sapiens; Human immunodeficiency virus 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Sarkar, A., Kumar, S., Wilson, I.A.",3.82,X-RAY DIFFRACTION,0.301,0.271,False,True,IGHV1,IGLV2,Lambda,,,,,,8e1p_H_L_G,False
8vur,H,L,0,A,protein,,"glutamate receptor ionotropic, nmda 1",MEMBRANE PROTEIN/IMMUNE SYSTEM,09/11/24,Human GluN1-2A with IgG 003-102 WT conformation,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Michalski, K., Furukawa, H.",3.84,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGLV6,Lambda,,,,,,8vur_H_L_A,False
8dz5,M,N,0,I,peptide,,circumsporozoite protein,IMMUNE SYSTEM,08/02/23,Cryo-EM structure of 364 Fab in complex with recombinant shortened Plasmodium falciparum circumsporozoite protein (rsCSP),Homo sapiens; Plasmodium falciparum,homo sapiens,homo sapiens,plasmodium falciparum,"Martin, G.M., Ward, A.B.",3.84,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8dz5_M_N_I,False
7tca,D,E,0,C,protein,,spike glycoprotein,VIRAL PROTEIN/Immune System,12/23/21,Cryo-EM structure of SARS-CoV-2 Omicron spike in complex with antibody A19-46.1,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, T., Kwong, P.D.",3.85,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV8,Lambda,,,,,,7tca_D_E_C,False
6ofi,H,L,0,G,protein,,clade a/e 93th057 hiv-1 gp120 core,IMMUNE SYSTEM,03/29/19,CRYSTAL STRUCTURE OF the RV144 C1-C2 SPECIFIC ANTIBODY CH55 FAB IN COMPLEX WITH HIV-1 CLADE A/E GP120,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Tolbert, W.D., Yan, F., Van, V., Pazgier, M.",3.85,X-RAY DIFFRACTION,0.326,0.271,False,True,IGHV1,IGKV3,Kappa,,,,,,6ofi_H_L_G,False
9v0q,A,C,0,B,protein,,rsv pre-fusion protein,VIRAL PROTEIN,12/31/25,Cryo-EM structure of RSV pre-F in complex with antibody CNR2056,Homo sapiens; Respiratory syncytial virus A2,homo sapiens,homo sapiens,respiratory syncytial virus a2,"Zhai, H., Deng, J., Yu, W.",3.85,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV2,Lambda,,,,,,9v0q_A_C_B,False
4utb,H,L,0,A,protein,,envelope glycoprotein e,IMMUNE SYSTEM/VIRAL PROTEIN,07/18/14,Crystal structure of dengue 2 virus envelope glycoprotein in complex  with the Fab fragment of the broadly neutralizing human antibody EDE2  A11,HOMO SAPIENS; DENGUE VIRUS 2,homo sapiens,homo sapiens,dengue virus 2,"Rouvinski, A., Guardado-Calvo, P., Barba-Spaeth, G., Duquerroy, S., Vaney, M.C., Rey, F.A.",3.85,X-RAY DIFFRACTION,0.2567,0.2297,False,True,IGHV3,IGLV2,Lambda,,,,,,4utb_H_L_A,False
6dfh,H,L,0,A,protein,,envelope glycoprotein gp160,VIRAL PROTEIN/IMMUNE SYSTEM,05/14/18,BG505 MD64 N332-GT2 SOSIP trimer in complex with germline-reverted BG18 fragment antigen binding,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Ozorowski, G., Steichen, J.M., Schief, W.R., Ward, A.B.",3.85,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGLV3,Lambda,,,,,,6dfh_H_L_A,False
4utb,I,M,0,B,protein,,envelope glycoprotein e,IMMUNE SYSTEM/VIRAL PROTEIN,07/18/14,Crystal structure of dengue 2 virus envelope glycoprotein in complex  with the Fab fragment of the broadly neutralizing human antibody EDE2  A11,HOMO SAPIENS; DENGUE VIRUS 2,homo sapiens,homo sapiens,dengue virus 2,"Rouvinski, A., Guardado-Calvo, P., Barba-Spaeth, G., Duquerroy, S., Vaney, M.C., Rey, F.A.",3.85,X-RAY DIFFRACTION,0.2567,0.2297,False,True,IGHV3,IGLV2,Lambda,,,,,,4utb_I_M_B,False
8pq2,H,L,0,C,protein,,spike protein s2',VIRAL PROTEIN,11/01/23,XBB 1.0 RBD bound to P4J15 (Local),Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Duhoo, Y., Lau, K.",3.85,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV1,Kappa,,,,,,8pq2_H_L_C,False
6u59,K,J,0,G,protein,,"sosip.664 gp120,sosip.664 gp120",VIRAL PROTEIN/IMMUNE SYSTEM,08/27/19,HIV-1 B41 SOSIP.664 in complex with rabbit antibody 13B,HUMAN IMMUNODEFICIENCY VIRUS 1; ORYCTOLAGUS CUNICULUS,oryctolagus cuniculus,oryctolagus cuniculus,human immunodeficiency virus 1,"Yang, Y.R., Ward, A.B.",3.86,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,6u59_K_J_G,False
7tcc,H,L,0,B,protein,,spike glycoprotein,VIRAL PROTEIN/Immune System,12/23/21,Cryo-EM structure of SARS-CoV-2 Omicron spike in complex with antibodies A19-46.1 and B1-182.1,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, T., Kwong, P.D.",3.86,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV8,Lambda,,,,,,7tcc_H_L_B,False
8ddk,A,B,0,C,protein,,envelopment polyprotein,VIRAL PROTEIN,12/14/22,CCHFV GP38 Hoti/Kosovo bound with CC5_17,Crimean-Congo hemorrhagic fever orthonairovirus; Homo sapiens,homo sapiens,homo sapiens,crimean-congo hemorrhagic feverorthonairovirus ,"Durie, I.A., Bergeron, E., Pegan, S.D., McGuire, J.",3.86,X-RAY DIFFRACTION,0.335,0.304,False,True,IGHV5,IGKV1,Kappa,,,,,,8ddk_A_B_C,False
9dpe,H,L,0,A,protein,,butyrophilin subfamily 2 member a1,IMMUNE SYSTEM,04/23/25,CryoEM Structure of Human BTN2A1 ectodomain in complex with TCR-blocking 2A1.12 Fab,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Ramesh, A., Fuller, J.R., Roy, S., Adams, E.",3.86,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,9dpe_H_L_A,False
9v0p,H,L,0,A,protein,,rsv pre-fusion protein,VIRAL PROTEIN,12/31/25,Cryo-EM structure of RSV pre-F in complex with antibody CNR2053,Homo sapiens; Respiratory syncytial virus A2,homo sapiens,homo sapiens,respiratory syncytial virus a2,"Zhai, H., Deng, J., Yu, W.",3.87,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV2,Kappa,,,,,,9v0p_H_L_A,False
6vo1,G,J,0,C,protein,,envelope glycoprotein gp120,VIRAL PROTEIN,01/29/20,BG505 SOSIP.v5.2 in complex with rhesus macaque Fab RM20J,HUMAN IMMUNODEFICIENCY VIRUS 1; MACACA MULATTA,macaca mulatta,macaca mulatta,human immunodeficiency virus 1,"Cottrell, C.A., Ward, A.B.",3.88,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV1,Kappa,,,,,,6vo1_G_J_C,False
7wp8,E,G,0,F,protein,,spike glycoprotein,IMMUNE SYSTEM/VIRAL PROTEIN,03/08/23,Cryo-EM structure of SARS-CoV-2 recombinant spike protein STFK1628x in complex with three neutralizing antibodies,Mus musculus; Severe acute respiratory syndrome coronavirus 2,mus musculus,mus musculus,severe acute respiratory syndrome coronavirus2 ,"Zheng, Q., Sun, H., Yuan, Q., Li, S., Xia, N.",3.88,ELECTRON MICROSCOPY,,,False,False,IGHV1,IGKV8,Kappa,,,,,,7wp8_E_G_F,False
8k19,A,B,0,E,protein,,spike protein s1,VIRAL PROTEIN,10/09/24,Neutralization antibody ZCP3B4 bound with SARS-CoV-2 Omicron BA.5 RBD,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Tang, B., Dang, S.",3.88,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8k19_A_B_E,False
8swh,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,05/22/24,Local refinement of SARS-CoV-2 (HP-GSAS-Mut7) spike NTD in complex with TXG-0078 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Bangaru, B., Ward, A.",3.88,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV2,Kappa,,,,,,8swh_H_L_A,False
9ei9,A,D,0,C,protein,,hemagglutinin ha1,IMMUNE SYSTEM,07/16/25,Cryo-EM structure of 5E10 Fab in complex with H3 influenza Victoria 2011 HA trimer,Influenza A virus; Mus musculus,mus musculus,mus musculus,influenza a virus,"Gorman, J., Kwong, P.D.",3.89,ELECTRON MICROSCOPY,,,False,True,IGHV8,IGLV2,Lambda,,,,,,9ei9_A_D_C,False
9ehl,I,L,0,C,protein,,"hiv-1 bg505 sosip gp120,envelope glycoprotein gp120",VIRAL PROTEIN/IMMUNE SYSTEM,05/21/25,Structure of HIV-1 BG505 SOSIP.664 Env trimer in complex with IOMAmin5 and 10-1074 Broadly Neutralizing Antibodies - Class I,Homo sapiens; Human immunodeficiency virus 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Dam, K.A., Yang, Z., Bjorkman, P.J.",3.9,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV2,Lambda,,,,,,9ehl_I_L_C,False
6oro,J,K,0,I,protein,,rc1 variant of hiv-1 env glycoprotein gp120,VIRAL PROTEIN/Immune System,04/30/19,Modified BG505 SOSIP-based immunogen RC1 in complex with the elicited V3-glycan patch antibody Ab874NHP,HUMAN IMMUNODEFICIENCY VIRUS 1; MACACA MULATTA,macaca mulatta,macaca mulatta,human immunodeficiency virus 1,"Abernathy, M.E., Gristick, H.B., Bjorkman, P.J.",3.9,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV3,Lambda,,,,,,6oro_J_K_I,False
7kfb,H,K,0,B,protein,,virion spike glycoprotein 1,VIRAL PROTEIN/IMMUNE SYSTEM,10/13/20,"Ebola virus GP (mucin deleted, Makona strain) bound to antibody Fab EBOV-442",EBOLA VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,ebola virus,"Murin, C.D., Ward, A.B.",3.9,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV3,Kappa,,,,,,7kfb_H_K_B,False
7tug,H,L,0,D,protein,,tapasin,IMMUNE SYSTEM,09/07/22,Crystal structure of Tapasin in complex with PaSta2-Fab,Homo sapiens; Mus musculus,mus musculus,mus musculus,homo sapiens,"Jiang, J., Natarajan, K., Taylor, D.K., Boyd, L.F., Margulies, D.H.",3.9,X-RAY DIFFRACTION,0.332,0.282,False,True,IGHV1,IGKV8,Kappa,,,,,,7tug_H_L_D,False
7cec,H,I,0,B,protein,,integrin beta-1,CELL ADHESION/IMMUNE SYSTEM,06/22/20,Structure of alpha6beta1 integrin in complex with laminin-511,HOMO SAPIENS; MUS MUSCULUS,"mus musculus, homo sapiens","mus musculus, homo sapiens",homo sapiens,"Arimori, T., Miyazaki, N., Takagi, J.",3.9,ELECTRON MICROSCOPY,,,False,True,IGHV8,IGKV4,Kappa,,,,,,7cec_H_I_B,False
6jhq,D,E,0,C,protein,,vp3,VIRUS,02/18/19,The cryo-EM structure of HAV bound to a neutralizing antibody-F4,HUMAN HEPATITIS A VIRUS HU/AUSTRALIA/HM175/1976; MUS MUSCULUS,mus musculus,mus musculus,human hepatitis a virushu/australia/hm175/1976 ,"Cao, L., Liu, P., Yang, P., Gao, Q., Li, H., Sun, Y., Zhu, L., Lin, J., Su, D., Rao, Z., Wang, X.",3.9,ELECTRON MICROSCOPY,,,False,False,IGHV5,IGKV4,Kappa,,,,,,6jhq_D_E_C,False
9mih,H,L,0,A,protein,,hiv-1 envelope glycoprotein bg505 sosip.664 gp120,VIRAL PROTEIN,05/21/25,273-4D01 Fab in complex with HIV-1 BG505 SOSIP Env trimer and RM20A3 Fab,Homo sapiens; Human immunodeficiency virus 1; Macaca mulatta,human immunodeficiency virus 1,homo sapiens,human immunodeficiency virus 1,"Phulera, S., Ozorowski, G., Ward, A.B.",3.9,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,9mih_H_L_A,False
7m6f,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/ANTIVIRAL PROTEIN,03/25/21,"Structure of the SARS-CoV-2 S 6P trimer in complex with the human neutralizing antibody Fab fragment, BG1-22",SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Barnes, C.O., Bjorkman, P.J.",3.9,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV1,Lambda,,,,,,7m6f_H_L_A,False
6udk,M,N,0,R,protein,,rc1 variant of hiv-1 env glycoprotein gp120,VIRAL PROTEIN/IMMUNE SYSTEM,09/19/19,HIV-1 bNAb 1-55 in complex with modified BG505 SOSIP-based immunogen RC1 and 10-1074,HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Abernathy, M.E., Barnes, C.O., Gristick, H.B., Bjorkman, P.J.",3.9,ELECTRON MICROSCOPY,,,False,True,unknown,IGKV3,Kappa,,,,,,6udk_M_N_R,False
5njd,N,M,0,K,protein,,interleukin-12 subunit beta,IMMUNE SYSTEM,03/28/17,Structure of Interleukin 23 in complex with Briakinumab FAb,HOMO SAPIENS,homo sapiens,homo sapiens,homo sapiens,"Bloch, Y., Savvides, S.N.",3.9,X-RAY DIFFRACTION,0.312,0.272,False,True,IGHV3,IGLV1,Lambda,,,,,,5njd_N_M_K,False
9aru,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN,01/29/25,COVA2-15 fragment antigen binding in complex with SARS-CoV-2 6P-mut7 S protein,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Ozorowski, G., Turner, H.L., Ward, A.B.",3.9,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV2,Kappa,,,,,,9aru_H_L_A,False
6xdg,B,D,0,E,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,06/10/20,Complex of SARS-CoV-2 receptor binding domain with the Fab fragments of two neutralizing antibodies,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; MUS MUSCULUS; HOMO SAPIENS,mus musculus,mus musculus,severe acute respiratory syndrome coronavirus2 ,"Franklin, M.C., Saotome, K., Romero Hernandez, A., Zhou, Y.",3.9,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,6xdg_B_D_E,False
7k8x,E,G,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,09/27/20,"Structure of the SARS-CoV-2 S 2P trimer in complex with the human neutralizing antibody Fab fragment, C121 (State 1)",SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Abernathy, M.E., Barnes, C.O., Bjorkman, P.J.",3.9,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV2,Lambda,,,,,,7k8x_E_G_A,False
8vww,H,L,0,A,protein,,gp38,VIRAL PROTEIN/IMMUNE SYSTEM,07/24/24,CCHFV GP38 bound to ADI-46152 and ADI-58048 Fabs,Crimean-Congo hemorrhagic fever virus strain IbAr10200; Homo sapiens,homo sapiens,homo sapiens,crimean-congo hemorrhagic fever virus strainibar10200 ,"Hjorth, C.K., McLellan, J.S.",3.9,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV1,Kappa,,,,,,8vww_H_L_A,False
8i3s,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,10/04/23,Local CryoEM structure of the SARS-CoV-2 S6P in complex with 7B3 Fab,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Li, Z., Yu, F., Cao, S., ZHao, H.",3.9,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,8i3s_H_L_A,False
9pv5,A,B,0,C,protein,,10e8-gt10.2 immunogen,VIRAL PROTEIN/IMMUNE SYSTEM,12/10/25,10E8-GT10.2 immunogen in complex with Rhesus macaque Fab W3-05 and mouse Fab W6-03,Macaca mulatta; Mus musculus; synthetic construct,macaca mulatta,macaca mulatta,synthetic construct,"Huang, J., Ward, A.B.",3.9,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV3,Lambda,,,,,,9pv5_A_B_C,False
8vti,D,C,0,A,protein,,isoform 4 of adhesion g protein-coupled receptor l3,SIGNALING PROTEIN,12/11/24,Latrophilin-3 (ADGRL3) HormR and GAIN domains in the context of the holoreceptor,Homo sapiens; synthetic construct,synthetic construct,synthetic construct,homo sapiens,"Kordon, S.P., Bandekar, S.J., Arac, D.",3.9,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8vti_D_C_A,False
9pv5,H,L,0,C,protein,,10e8-gt10.2 immunogen,VIRAL PROTEIN/IMMUNE SYSTEM,12/10/25,10E8-GT10.2 immunogen in complex with Rhesus macaque Fab W3-05 and mouse Fab W6-03,Macaca mulatta; Mus musculus; synthetic construct,mus musculus,mus musculus,synthetic construct,"Huang, J., Ward, A.B.",3.9,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV8,Kappa,,,,,,9pv5_H_L_C,False
7l2f,H,L,0,A,protein,,spike glycoprotein,Viral Protein/IMMUNE SYSTEM,12/16/20,Cryo-EM structure of NTD-directed neutralizing antibody 5-24 in complex with prefusion SARS-CoV-2 spike glycoprotein,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Cerutti, G., Shapiro, L.",3.9,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV3,Kappa,,,,,,7l2f_H_L_A,False
7m8l,O,R,0,F,protein,,virion spike glycoprotein 2,VIRAL PROTEIN/IMMUNE SYSTEM,03/30/21,EBOV GP bound to rEBOV-442 and rEBOV-515 Fabs,EBOLA VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,ebola virus,"Murin, C.D., Ward, A.B.",3.9,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGKV3,Kappa,,,,,,7m8l_O_R_F,False
7ps7,A,B,0,E,protein,,surface glycoprotein,VIRAL PROTEIN,09/22/21,Crystal structure of the receptor binding domain of SARS-CoV-2 beta variant spike glycoprotein in complex with Beta-40 Fab,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Zhou, D., Ren, J., Stuart, D.I.",3.9,X-RAY DIFFRACTION,0.284,0.233,False,True,IGHV4,IGLV3,Lambda,,,,,,7ps7_A_B_E,False
7d3k,H,L,0,2,protein,,o/tibet/99 vp2,VIRUS,09/19/20,FOOT AND MOUTH DISEASE VIRUS O/TIBET/99-BOUND THE SINGLE CHAIN FRAGMEN ANTIBODY B77,BOS TAURUS; FOOT-AND-MOUTH DISEASE VIRUS,bos taurus,bos taurus,foot-and-mouth disease virus,"He, Y., Lou, Z.",3.9,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV1,Lambda,,,,,,7d3k_H_L_2,False
7oh0,C,B,0,A,protein,,tetanus toxin,TOXIN,05/07/21,Tetanus neurotoxin HC domain in complex with TT104-Fab1,CLOSTRIDIUM TETANI; HOMO SAPIENS,homo sapiens,homo sapiens,clostridium tetani,"Grinzato, A., Kandiah, E., Zanotti, G.",3.9,ELECTRON MICROSCOPY,,,False,False,IGHV4,IGKV3,Kappa,,,,,,7oh0_C_B_A,False
9b13,H,L,0,A,protein,,"1-phosphatidylinositol 4,5-bisphosphate phosphodiesteraseepsilon-1 ",MEMBRANE PROTEIN,03/26/25,Cryo-EM structure of phospholipase Cepsilon PH-COOH in complex with an antigen-binding fragment (composite structure),Homo sapiens; Rattus norvegicus,homo sapiens,homo sapiens,rattus norvegicus,"Samassekou, K., Lyon, A.M.",3.9,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,9b13_H_L_A,False
2a0l,F,E,0,B,protein,,voltage-gated potassium channel,Membrane Protein,06/16/05,Crystal structure of KvAP-33H1 Fv complex,AEROPYRUM PERNIX; MUS MUSCULUS,mus musculus,mus musculus,aeropyrum pernix,"Lee, S.Y., Lee, A., Chen, J., Mackinnon, R.",3.9,X-RAY DIFFRACTION,0.392,0.358,False,False,IGHV3,IGKV4,Kappa,,,,,,2a0l_F_E_B,False
9l3z,H,L,0,A,protein,,"chemerin-like receptor 1,soluble cytochrome b562",MEMBRANE PROTEIN/IMMUNE SYSTEM,03/12/25,Cryo-EM structure of the inactive chemokine-like receptor 1 (CMKLR1),Escherichia coli; Homo sapiens; Mus musculus,mus musculus,mus musculus,"homo sapiens, escherichia coli","Zhu, Y., He, M., Wu, B., Zhao, Q.",3.9,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,9l3z_H_L_A,False
6xdg,C,A,0,E,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,06/10/20,Complex of SARS-CoV-2 receptor binding domain with the Fab fragments of two neutralizing antibodies,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; MUS MUSCULUS; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Franklin, M.C., Saotome, K., Romero Hernandez, A., Zhou, Y.",3.9,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV2,Lambda,,,,,,6xdg_C_A_E,False
7fbi,N,M,0,A,protein,,envelope glycoprotein b,VIRAL PROTEIN,07/13/22,Cryo-EM structure of EBV gB in complex with nAbs 3A3 and 3A5,Epstein-Barr virus (strain GD1); Oryctolagus cuniculus,oryctolagus cuniculus,oryctolagus cuniculus,epstein-barr virus (strain gd1),"Zheng, Q., Li, S., Zha, Z., Hong, J., Chen, Y., Zhang, X.",3.9,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,7fbi_N_M_A,False
7fbi,H,L,0,A,protein,,envelope glycoprotein b,VIRAL PROTEIN,07/13/22,Cryo-EM structure of EBV gB in complex with nAbs 3A3 and 3A5,Epstein-Barr virus (strain GD1); Oryctolagus cuniculus,oryctolagus cuniculus,oryctolagus cuniculus,epstein-barr virus (strain gd1),"Zheng, Q., Li, S., Zha, Z., Hong, J., Chen, Y., Zhang, X.",3.9,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,7fbi_H_L_A,False
7jix,H,L,0,A,protein,,hemagglutinin ha1 chain,Viral protein/IMMUNE SYSTEM,07/23/20,Murine antibody that engages the influenza hemagglutinin receptor binding site,INFLUENZA A VIRUS (A/SOLOMON ISLANDS/3/2006 (EGG PASSAGE)(H1N1)); INFLUENZA A VIRUS (A/MEXICO/UASLP-006/2008(H1N1)); MUS MUSCULUS,mus musculus,mus musculus,influenza a virus (a/solomon islands/3/2006(egg passage)(h1n1)) ,"Bajic, G., Schmidt, A.G.",3.901,X-RAY DIFFRACTION,0.255,0.215,False,True,IGHV1,IGKV3,Kappa,,,,,,7jix_H_L_A,False
5w1m,H,G,0,S,protein,,pre-glycoprotein polyprotein gp complex,VIRAL PROTEIN/IMMUNE SYSTEM,06/03/17,MACV GP1 CR1-07 Fab complex,HOMO SAPIENS; MACHUPO VIRUS,homo sapiens,homo sapiens,machupo virus,"Raymond, D.D., Clark, L.E., Abraham, J.",3.91,X-RAY DIFFRACTION,0.264,0.248,False,True,IGHV3,IGKV4,Kappa,1.63e-08,-10.624477030127814,SPR,,TBD,5w1m_H_G_S,False
8zc5,E,C,0,B,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,05/15/24,"SARS-CoV-2 Omicron BA.4 spike trimer (6P) in complex with D1F6 Fab, focused refinement of RBD region",Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Liu, B., Gao, X., Li, Z., Chen, Q., He, J., Xiong, X.",3.91,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV1,Lambda,,,,,,8zc5_E_C_B,False
7ly9,H,L,0,D,protein,,envelope glycoprotein gp120,VIRAL PROTEIN/IMMUNE SYSTEM,03/06/21,Cryo-EM structure of 2909 Fab in complex with 3BNC117 Fab and CAP256.wk34.c80 SOSIP.RnS2 N160K HIV-1 Env trimer,HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Gorman, J., Kwong, P.D.",3.91,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV3,Lambda,,,,,,7ly9_H_L_D,False
9d90,G,H,0,D,protein,,transmembrane protein gp41,VIRAL PROTEIN/IMMUNE SYSTEM,04/30/25,"Cryo-EM structure of partially open HIV-1 BG505 SOSIP.664 Env bound to 3-sCD4, 3-17b Fab and 3-VRC34.01 Fab",Homo sapiens; Human immunodeficiency virus 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Thakur, B., Acharya, P.",3.91,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,9d90_G_H_D,False
9pzv,J,K,0,B,protein,,"glutamate receptor ionotropic, nmda 2a",TRANSPORT PROTEIN,12/17/25,"Native GluN1/GluN2A in complex with 5F11 and 3D2 Fabs, local ATD dimer",Mus musculus,mus musculus,mus musculus,mus musculus,"Kim, J., Gouaux, E.",3.92,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,9pzv_J_K_B,False
7te9,H,L,0,D,protein,,"glutamate receptor ionotropic, nmda 2b",SIGNALING PROTEIN/IMMUNE SYSTEM,01/04/22,Cryo-EM structure of GluN1b-2B NMDAR complexed to Fab2 class1,RATTUS NORVEGICUS; MUS MUSCULUS,mus musculus,mus musculus,rattus norvegicus,"Tajima, N., Furukawa, H.",3.92,ELECTRON MICROSCOPY,,,False,False,IGHV5,IGKV19,Kappa,,,,,,7te9_H_L_D,False
7k66,B,C,0,A,protein,,"coagulation factor viii,coagulation factor viii,coagulationfactor viii,coagulation factor viii ",BLOOD CLOTTING/Immune System,09/18/20,Structure of Blood Coagulation Factor VIII in Complex with an Anti-C1 Domain Pathogenic Antibody Inhibitor,SUS SCROFA; HOMO SAPIENS; MUS MUSCULUS,mus musculus,mus musculus,"sus scrofa, homo sapiens","Childers, K.C., Gish, J., Jarvis, L., Peters, S., Garrels, C., Smith, I.W., Spencer, H.T., Spiegel, P.C.",3.92,X-RAY DIFFRACTION,0.322,0.226,False,True,IGHV9,IGKV4,Kappa,,,,,,7k66_B_C_A,False
9pzv,H,I,0,A,protein,,"glutamate receptor ionotropic, nmda 1",TRANSPORT PROTEIN,12/17/25,"Native GluN1/GluN2A in complex with 5F11 and 3D2 Fabs, local ATD dimer",Mus musculus,mus musculus,mus musculus,mus musculus,"Kim, J., Gouaux, E.",3.92,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV8,Kappa,,,,,,9pzv_H_I_A,False
8yz5,G,K,0,D,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,06/05/24,SARS-CoV-2 Delta Spike in complex with Fab of JE-5C,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Chen, X., Wu, Y.-M.",3.93,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8yz5_G_K_D,False
9pf9,H,L,0,G,protein,,bllf1,IMMUNE SYSTEM,12/24/25,X-ray crystal structure of ATX-350-2 Fab bound to Epstein-Barr virus glycoprotein 350,human gammaherpesvirus 4; Mus musculus,mus musculus,mus musculus,human gammaherpesvirus 4,"Lang, K., Kher, G., Aldridge, N.T., Pancera, M.",3.93,X-RAY DIFFRACTION,0.282,0.242,False,True,IGHV2,IGKV3,Kappa,,,,,,9pf9_H_L_G,False
9ua5,G,K,0,C,protein,,glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,01/07/26,RABV G binding with CTB011 Fab and CTB012 Fab,Lyssavirus rabies; Mus musculus,mus musculus,mus musculus,lyssavirus rabies,"Cao, L., Zhang, C.",3.94,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,9ua5_G_K_C,False
6p65,H,L,0,A,protein,,hiv env 16055 nfl td 2cc+,VIRAL PROTEIN/immune system,05/31/19,HIV Env 16055 NFL TD 2CC+ in complex with antibody 1C2 fragment antigen binding,HUMAN IMMUNODEFICIENCY VIRUS 1; ORYCTOLAGUS CUNICULUS,oryctolagus cuniculus,oryctolagus cuniculus,human immunodeficiency virus 1,"Ozorowski, G., Torres, J.L., Ward, A.B.",3.94,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,6p65_H_L_A,False
9ua5,H,D,0,C,protein,,glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,01/07/26,RABV G binding with CTB011 Fab and CTB012 Fab,Lyssavirus rabies; Mus musculus,mus musculus,mus musculus,lyssavirus rabies,"Cao, L., Zhang, C.",3.94,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,9ua5_H_D_C,False
6d9w,H,L,0,A,protein,,divalent metal cation transporter mnth,TRANSPORT PROTEIN,04/30/18,"Crystal structure of Deinococcus radiodurans MntH, an Nramp-family transition metal transporter, in the inward-open apo state",DEINOCOCCUS RADIODURANS; MUS MUSCULUS,mus musculus,mus musculus,deinococcus radiodurans,"Gaudet, R., Bane, L.B., Weihofen, W.A., Singharoy, A., Zimanyi, C.M., Bozzi, A.T.",3.941,X-RAY DIFFRACTION,0.309,0.271,False,True,IGHV2,IGKV5,Kappa,,,,,,6d9w_H_L_A,False
5wob,Q,R,0,E,protein,,insulin,HYDROLASE,08/01/17,Crystal Structure Analysis of Fab1-Bound Human Insulin Degrading Enzyme (IDE) in Complex with Insulin,HOMO SAPIENS; MUS MUSCULOIDES,mus musculoides,mus musculoides,homo sapiens,"McCord, L.A., Liang, W.G., Farcasanu, M., Wang, A.G., Koide, S., Tang, W.J.",3.95,X-RAY DIFFRACTION,0.291,0.243,False,True,IGHV3,IGKV1,Kappa,,,,,,5wob_Q_R_E,False
5wob,U,V,0,G,protein,,insulin,HYDROLASE,08/01/17,Crystal Structure Analysis of Fab1-Bound Human Insulin Degrading Enzyme (IDE) in Complex with Insulin,HOMO SAPIENS; MUS MUSCULOIDES,mus musculoides,mus musculoides,homo sapiens,"McCord, L.A., Liang, W.G., Farcasanu, M., Wang, A.G., Koide, S., Tang, W.J.",3.95,X-RAY DIFFRACTION,0.291,0.243,False,True,IGHV3,IGKV1,Kappa,,,,,,5wob_U_V_G,False
9pv3,B,C,0,D,protein,,10e8-gt12 immunogen,VIRAL PROTEIN/IMMUNE SYSTEM,12/10/25,10E8-GT12 immunogen in complex with mouse Fabs SA2911 and W6-10,Mus musculus; synthetic construct,mus musculus,mus musculus,synthetic construct,"Huang, J., Ward, A.B.",3.95,ELECTRON MICROSCOPY,,,False,True,IGHV8,IGKV12,Kappa,,,,,,9pv3_B_C_D,False
9pv3,H,L,0,D,protein,,10e8-gt12 immunogen,VIRAL PROTEIN/IMMUNE SYSTEM,12/10/25,10E8-GT12 immunogen in complex with mouse Fabs SA2911 and W6-10,Mus musculus; synthetic construct,mus musculus,mus musculus,synthetic construct,"Huang, J., Ward, A.B.",3.95,ELECTRON MICROSCOPY,,,False,True,IGHV2,IGKV8,Kappa,,,,,,9pv3_H_L_D,False
7r7n,H,L,0,E,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,06/25/21,SARS-CoV-2 spike in complex with the S2D106 neutralizing antibody Fab fragment (local refinement of the RBD and S2D106),HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Park, Y.J., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)",3.95,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,7r7n_H_L_E,False
5wob,O,P,0,D,protein,,insulin,HYDROLASE,08/01/17,Crystal Structure Analysis of Fab1-Bound Human Insulin Degrading Enzyme (IDE) in Complex with Insulin,HOMO SAPIENS; MUS MUSCULOIDES,mus musculoides,mus musculoides,homo sapiens,"McCord, L.A., Liang, W.G., Farcasanu, M., Wang, A.G., Koide, S., Tang, W.J.",3.95,X-RAY DIFFRACTION,0.291,0.243,False,True,IGHV3,IGKV1,Kappa,,,,,,5wob_O_P_D,False
6uye,G,J,0,A,protein,,sgp,VIRAL PROTEIN/IMMUNE SYSTEM,11/13/19,EBOV GPdMuc Makona bound to rEBOV-548 Fab,EBOLA VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,ebola virus,"Murin, C.D., Ward, A.B.",3.96,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,6uye_G_J_A,False
8blq,E,C,0,D,protein,,"interleukin-13, human",IMMUNE SYSTEM,06/07/23,Cryo-EM structure of the CODV-IL13-RefAb triple complex,Homo sapiens,homo sapiens,homo sapiens,homo sapiens,"Fernandez-Martinez, D., Kandiah, E.",3.97,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV3,Lambda,,,,,,8blq_E_C_D,False
8ix3,H,L,0,G,protein,,ba.4/5 variant spike protein,VIRAL PROTEIN/IMMUNE SYSTEM,11/15/23,Cryo-EM structure of SARS-CoV-2 BA.4/5 spike protein in complex with 1G11 (local refinement),Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Sun, H., Jiang, Y., Zheng, Z., Zheng, Q., Li, S.",3.98,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,8ix3_H_L_G,False
5w1k,Q,M,0,R,protein,,pre-glycoprotein polyprotein gp complex,VIRAL PROTEIN/IMMUNE SYSTEM,06/03/17,JUNV GP1 CR1-10 Fab CR1-28 Fab complex,HOMO SAPIENS; JUNIN MAMMARENAVIRUS,homo sapiens,homo sapiens,junin mammarenavirus,"Raymond, D.D., Clark, L.E., Abraham, J.",3.99,X-RAY DIFFRACTION,0.288,0.237,False,True,IGHV4,IGKV3,Kappa,,,,,,5w1k_Q_M_R,False
8gsb,H,K,0,A,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,09/06/23,SARS-COV-2 BA.1 Spike incomplex with VacBB-665,Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Liu, C.C., Ju, B., Shen, S.L., Zhang, Z.",3.99,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,8gsb_H_K_A,False
7v6n,E,D,0,A,protein,,spike glycoprotein,PROTEIN BINDING,09/14/22,MERS S ectodomain trimer in complex with neutralizing antibody 111 state1,Homo sapiens; Human betacoronavirus 2c EMC/2012,homo sapiens,homo sapiens,human betacoronavirus 2c emc/2012,"Wang, X., Zhao, J., Wang, Z., Zeng, J., Zhang, S., Wang, Y.",3.99,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV1,Kappa,,,,,,7v6n_E_D_A,False
6pdx,O,P,0,C,protein,,hemagglutinin,IMMUNE SYSTEM,06/19/19,Crystal structure of C585 Fab in complex with influenza virus hemagglutinin from A/Switzerland/9715293/2013 (H3N2),INFLUENZA A VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus,"Qiu, Y., Zhou, Y.",3.993,X-RAY DIFFRACTION,0.242,0.212,False,True,IGHV4,IGLV1,Lambda,,,,,,6pdx_O_P_C,False
8qks,V,U,0,T,protein,,reticulocyte-binding protein-like protein 5,IMMUNE SYSTEM,07/31/24,Plasmodium falciparum reticulocyte-binding protein homologue 5 (PfRH5) bound to R5.034,Homo sapiens; Plasmodium falciparum,homo sapiens,homo sapiens,plasmodium falciparum,"Wright, N.D., Barrett, J.R., Bradshaw, W.J., Paterson, N.G., MacLean, E.M., Ferreira, L., McHugh, K., Von Delft, F., Koekemoer, L., Draper, S.J.",3.994,X-RAY DIFFRACTION,0.458,0.441,False,True,IGHV3,IGLV1,Lambda,,,,,,8qks_V_U_T,False
6p3s,I,J,0,K,protein,,hemagglutinin,IMMUNE SYSTEM/VIRAL PROTEIN,05/27/20,Crystal structure of human Fab H5.28 in complex with influenza A H5N1 Vietnam hemagglutinin head domain,HOMO SAPIENS; INFLUENZA A VIRUS (A/CHICKEN/VIETNAM/32/2004(H5N1)),homo sapiens,homo sapiens,influenza a virus(a/chicken/vietnam/32/2004(h5n1)) ,"Dong, J., Crowe, J.E.",4.0,X-RAY DIFFRACTION,0.326,0.281,False,True,IGHV3,IGKV1,Kappa,,,,,,6p3s_I_J_K,False
3whe,1,2,0,H,protein,,hemagglutinin,VIRAL PROTEIN/IMMUNE SYSTEM,08/25/13,A new conserved neutralizing epitope at the globular head of hemagglutinin in H3N2 influenza viruses,INFLUENZA A VIRUS; HOMO SAPIENS,homo sapiens,homo sapiens,influenza a virus,"Fujii, Y., Sumida, T., Shirouzu, M., Yokoyama, S.",4.0,X-RAY DIFFRACTION,0.308,0.235,False,True,IGHV1,IGLV1,Lambda,,,,,,3whe_1_2_H,False
7tfn,H,L,0,A,protein,,envelope glycoprotein bg505 sosip.664 - gp120,VIRAL PROTEIN/IMMUNE SYSTEM,01/06/22,Cryo-EM structure of CD4bs antibody Ab1303 in complex with HIV-1 Env trimer BG505 SOSIP.664,HUMAN IMMUNODEFICIENCY VIRUS 1; MACACA MULATTA,macaca mulatta,macaca mulatta,human immunodeficiency virus 1,"Yang, Z., Bjorkman, P.J.",4.0,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGLV4,Lambda,,,,,,7tfn_H_L_A,False
5nj6,H,L,0,A,protein,,"proteinase-activated receptor 2,soluble cytochrome b562,proteinase-activated receptor 2 ",MEMBRANE PROTEIN,03/28/17,Crystal structure of a thermostabilised human protease-activated receptor-2 (PAR2) in ternary complex with Fab3949 and AZ7188 at 4.0 angstrom resolution,MUS MUSCULUS; HOMO SAPIENS,mus musculus,mus musculus,"homo sapiens, escherichia coli","Cheng, R.K.Y., Fiez-Vandal, C., Schlenker, O., Edman, K., Aggeler, B., Brown, D.G., Brown, G., Cooke, R.M., Dumelin, C.E., Dore, A.S., Geschwindner, S., Grebner, C., Hermansson, N.-O., Jazayeri, A., Johansson, P., Leong, L., Prihandoko, R., Rappas, M., Soutter, H., Snijder, A., Sundstrom, L., Tehan, B., Thornton, P., Troast, D., Wiggin, G., Zhukov, A., Marshall, F.H., Dekker, N.",4.0,X-RAY DIFFRACTION,0.319,0.263,False,True,IGHV5,IGKV4,Kappa,,,,,,5nj6_H_L_A,False
7sfv,O,P,0,E,protein,,spike glycoprotein e2,VIRUS/IMMUNE SYSTEM,10/04/21,CryoEM structure of Venezuelan Equine Encephalitis virus (VEEV) TC-83 strain VLP in complex with Fab hVEEV-63,VENEZUELAN EQUINE ENCEPHALITIS VIRUS (STRAIN TC-83); HOMO SAPIENS,homo sapiens,homo sapiens,venezuelan equine encephalitis virus (straintc-83) ,"Binshtein, E., Crowe, J.E.",4.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV3,Lambda,,,,,,7sfv_O_P_E,False
8sxj,C,D,0,A,protein,,envelope glycoprotein gp160,VIRAL PROTEIN/Immune System,01/08/09,CH505 Disulfide Stapled SOSIP Bound to CH235.12 Fab,Homo sapiens; Human immunodeficiency virus 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Henderson, R.",4.0,ELECTRON MICROSCOPY,,,False,True,unknown,unknown,unknown,,,,,,8sxj_C_D_A,False
7zr9,D,E,0,C,protein,,"spike glycoprotein,fibritin",STRUCTURAL PROTEIN,05/03/22,OMI-2 FAB IN COMPLEX WITH SARS-COV-2 BETA SPIKE GLYCOPROTEIN,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; ENTEROBACTERIA PHAGE T4; HOMO SAPIENS,homo sapiens,homo sapiens,"severe acute respiratory syndrome coronavirus2, enterobacteria phage t4 ","Duyvesteyn, H.M.E., Ren, J., Stuart, D.I.",4.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,7zr9_D_E_C,False
7ucf,D,E,0,G,protein,,envelope glycoprotein gp120,VIRAL PROTEIN/IMMUNE SYSTEM,08/17/22,Structure of the BG505 SOSIP.664 trimer in complex with neutralizing antibody Fab fragments 10-1074 and BG24,Homo sapiens; Human immunodeficiency virus 1,homo sapiens,homo sapiens,human immunodeficiency virus 1,"Barnes, C.O., Bjorkman, P.J.",4.0,X-RAY DIFFRACTION,0.277,0.246,False,True,IGHV1,IGLV2,Lambda,,,,,,7ucf_D_E_G,False
6cue,3,4,0,1,protein,,envelope glycoprotein gp41,VIRAL PROTEIN,03/26/18,"Cryo-EM structure at 4.0 A resolution of vaccine-elicited antibody vFP7.04 in complex with HIV-1 Env BG505 DS-SOSIP, and antibodies VRC03 and PGT122",HUMAN IMMUNODEFICIENCY VIRUS 1; MUS MUSCULUS; HOMO SAPIENS,mus musculus,mus musculus,human immunodeficiency virus 1,"Acharya, P., Carragher, B., Potter, C.S., Kwong, P.D.",4.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV1,Kappa,,,,,,6cue_3_4_1,False
7m6h,E,G,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/ANTIVIRAL PROTEIN,03/25/21,"Structure of the SARS-CoV-2 S 2P trimer in complex with the human neutralizing antibody Fab fragment, BG7-20",SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Barnes, C.O., Bjorkman, P.J.",4.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV1,Lambda,,,,,,7m6h_E_G_A,False
9c7s,H,L,0,C,protein,,spike protein s2',VIRAL PROTEIN/IMMUNE SYSTEM,10/08/25,Cryo EM structure of SARS-COV-2 (BQ 1.1) RBD in complex with Fab COV2-3891 (local refine),Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Binshtein, E., Crowe, J.E.",4.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGLV1,Lambda,,,,,,9c7s_H_L_C,False
7eh5,D,O,0,A,protein,,spike glycoprotein,VIRAL PROTEIN,03/28/21,"Cryo-EM structure of SARS-CoV-2 S-D614G variant in complex with neutralizing antibodies, RBD-chAb15 and RBD-chAb45",SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Yang, T.J., Yu, P.Y., Chang, Y.C., Wu, H.C., Hsu, S.T.D.",4.0,ELECTRON MICROSCOPY,,,False,True,IGHV2,IGKV5,Kappa,,,,,,7eh5_D_O_A,False
7m6i,M,N,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/ANTIVIRAL PROTEIN,03/25/21,"Structure of the SARS-CoV-2 S 2P trimer in complex with the human neutralizing antibody Fab fragment, BG1-24",SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Barnes, C.O., Bjorkman, P.J.",4.0,ELECTRON MICROSCOPY,,,False,True,IGHV1,IGKV3,Kappa,,,,,,7m6i_M_N_A,False
7q9j,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN,11/12/21,Beta-26 fab in complex with SARS-CoV-2 beta-Spike glycoprotein,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Duyvesteyn, H.M.E., Ren, J., Stuart, D.I.",4.0,ELECTRON MICROSCOPY,,,False,True,IGHV4,IGLV3,Lambda,,,,,,7q9j_H_L_A,False
6p3s,V,W,0,X,protein,,hemagglutinin,IMMUNE SYSTEM/VIRAL PROTEIN,05/27/20,Crystal structure of human Fab H5.28 in complex with influenza A H5N1 Vietnam hemagglutinin head domain,HOMO SAPIENS; INFLUENZA A VIRUS (A/CHICKEN/VIETNAM/32/2004(H5N1)),homo sapiens,homo sapiens,influenza a virus(a/chicken/vietnam/32/2004(h5n1)) ,"Dong, J., Crowe, J.E.",4.0,X-RAY DIFFRACTION,0.326,0.281,False,True,IGHV3,IGKV1,Kappa,,,,,,6p3s_V_W_X,False
9pv4,H,L,0,C,protein,,10e8-gt12 immunogen,VIRAL PROTEIN/IMMUNE SYSTEM,12/10/25,MPER-GT12 immunogen in complex with human Fab 10E8 and mouse Fab W6-10,Homo sapiens; Mus musculus; synthetic construct,homo sapiens,homo sapiens,synthetic construct,"Huang, J., Ward, A.B.",4.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGLV3,Lambda,,,,,,9pv4_H_L_C,False
8dw9,H,L,0,A,protein,,spike protein s1,VIRAL PROTEIN/IMMUNE SYSTEM,12/07/22,Crystal structure of neutralizing antibody D29 Fab in complex with SARS-CoV-2 spike receptor binding domain (RBD),Homo sapiens; Severe acute respiratory syndrome coronavirus 2,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Reddem, E.R., Shapiro, L.",4.0,X-RAY DIFFRACTION,0.381,0.300,False,True,IGHV1,IGKV3,Kappa,,,,,,8dw9_H_L_A,False
7wee,H,L,0,E,protein,,spike glycoprotein,VIRAL PROTEIN/IMMUNE SYSTEM,12/23/21,SARS-CoV-2 Omicron variant spike RBD in complex with Fab XGv265,SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Wang, X., Wang, L.",4.0,ELECTRON MICROSCOPY,,,False,True,IGHV2,IGLV2,Lambda,,,,,,7wee_H_L_E,False
7n62,H,L,0,A,protein,,spike glycoprotein,VIRAL PROTEIN/Immune System,06/07/21,SARS-CoV-2 Spike (2P) in complex with C12C9 Fab (NTD local reconstruction),SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS,homo sapiens,homo sapiens,severe acute respiratory syndrome coronavirus2 ,"Windsor, I.W., Jenni, S., Bajic, G., Tong, P., Gautam, A.K., Wesemann, D.R., Harrison, S.C.",4.0,ELECTRON MICROSCOPY,,,False,True,IGHV3,IGKV3,Kappa,,,,,,7n62_H_L_A,False