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Upload folder using huggingface_hub

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  1. .gitattributes +60 -0
  2. .gitignore +3 -0
  3. ComputeCls.py +130 -0
  4. README.md +87 -0
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.gitattributes ADDED
@@ -0,0 +1,60 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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+ *.7z filter=lfs diff=lfs merge=lfs -text
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+ *.arrow filter=lfs diff=lfs merge=lfs -text
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+ *.avro filter=lfs diff=lfs merge=lfs -text
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+ *.bin filter=lfs diff=lfs merge=lfs -text
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+ *.bz2 filter=lfs diff=lfs merge=lfs -text
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+ *.ckpt filter=lfs diff=lfs merge=lfs -text
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+ *.ftz filter=lfs diff=lfs merge=lfs -text
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+ *.gz filter=lfs diff=lfs merge=lfs -text
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+ *.h5 filter=lfs diff=lfs merge=lfs -text
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+ *.joblib filter=lfs diff=lfs merge=lfs -text
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+ *.lfs.* filter=lfs diff=lfs merge=lfs -text
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+ *.lz4 filter=lfs diff=lfs merge=lfs -text
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+ *.mds filter=lfs diff=lfs merge=lfs -text
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+ *.mlmodel filter=lfs diff=lfs merge=lfs -text
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+ *.model filter=lfs diff=lfs merge=lfs -text
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+ *.msgpack filter=lfs diff=lfs merge=lfs -text
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+ *.npy filter=lfs diff=lfs merge=lfs -text
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+ *.npz filter=lfs diff=lfs merge=lfs -text
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+ *.onnx filter=lfs diff=lfs merge=lfs -text
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+ *.ot filter=lfs diff=lfs merge=lfs -text
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+ *.parquet filter=lfs diff=lfs merge=lfs -text
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+ *.pb filter=lfs diff=lfs merge=lfs -text
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+ *.pickle filter=lfs diff=lfs merge=lfs -text
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+ *.pkl filter=lfs diff=lfs merge=lfs -text
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+ *.pt filter=lfs diff=lfs merge=lfs -text
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+ *.pth filter=lfs diff=lfs merge=lfs -text
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+ *.rar filter=lfs diff=lfs merge=lfs -text
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+ *.safetensors filter=lfs diff=lfs merge=lfs -text
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+ saved_model/**/* filter=lfs diff=lfs merge=lfs -text
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+ *.tar.* filter=lfs diff=lfs merge=lfs -text
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+ *.tar filter=lfs diff=lfs merge=lfs -text
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+ *.tflite filter=lfs diff=lfs merge=lfs -text
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+ *.tgz filter=lfs diff=lfs merge=lfs -text
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+ *.wasm filter=lfs diff=lfs merge=lfs -text
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+ *.xz filter=lfs diff=lfs merge=lfs -text
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+ *.zip filter=lfs diff=lfs merge=lfs -text
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+ *.zst filter=lfs diff=lfs merge=lfs -text
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+ *tfevents* filter=lfs diff=lfs merge=lfs -text
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+ # Audio files - uncompressed
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+ *.pcm filter=lfs diff=lfs merge=lfs -text
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+ *.sam filter=lfs diff=lfs merge=lfs -text
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+ *.raw filter=lfs diff=lfs merge=lfs -text
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+ # Audio files - compressed
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+ *.aac filter=lfs diff=lfs merge=lfs -text
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+ *.flac filter=lfs diff=lfs merge=lfs -text
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+ *.mp3 filter=lfs diff=lfs merge=lfs -text
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+ *.ogg filter=lfs diff=lfs merge=lfs -text
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+ *.wav filter=lfs diff=lfs merge=lfs -text
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+ # Image files - uncompressed
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+ *.bmp filter=lfs diff=lfs merge=lfs -text
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+ *.gif filter=lfs diff=lfs merge=lfs -text
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+ *.png filter=lfs diff=lfs merge=lfs -text
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+ *.tiff filter=lfs diff=lfs merge=lfs -text
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+ # Image files - compressed
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+ *.jpg filter=lfs diff=lfs merge=lfs -text
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+ *.jpeg filter=lfs diff=lfs merge=lfs -text
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+ *.webp filter=lfs diff=lfs merge=lfs -text
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+ # Video files - compressed
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+ *.mp4 filter=lfs diff=lfs merge=lfs -text
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+ *.webm filter=lfs diff=lfs merge=lfs -text
.gitignore ADDED
@@ -0,0 +1,3 @@
 
 
 
 
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+ filtered_images
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+ images
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+ upload.py
ComputeCls.py ADDED
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+ from transformers import pipeline
2
+ import matplotlib.pyplot as plt
3
+ from pathlib import Path
4
+ from PIL import Image
5
+ import argparse
6
+ import shutil
7
+ import json
8
+ import os
9
+
10
+ # Argument parser
11
+ parser = argparse.ArgumentParser(description="Compute image classification")
12
+ parser.add_argument("input_path", type=str, help="Path to the input directory")
13
+
14
+ args = parser.parse_args()
15
+ input_path = args.input_path
16
+
17
+ checkpoint = "openai/clip-vit-large-patch14"
18
+ detector = pipeline(model=checkpoint, task="zero-shot-image-classification", use_fast=True)
19
+
20
+ # Setting up candidate labels for CLIP
21
+ candidate_labels = ["Archaeological artifact", "Documentation sheet", "Documentation sheet with archaeological artifact", "Archaeological excavation site", "Outdoor", "Landscape", "Archaeological structure", "Floor"]
22
+
23
+ # Define output .json file and target path for filtered images
24
+ output_file = Path(f"results_pred_dataset_{os.path.basename(input_path)}.json")
25
+ target_path = f"filtered_images/{os.path.basename(input_path)}" # Create the dir and subdirs manually
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+
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+ if output_file.exists():
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+ with output_file.open("r") as f:
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+ all_results = json.load(f)
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+ else:
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+ all_results = []
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+
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+ files = sorted([f for f in os.listdir(input_path) if f.endswith(".jpg")])
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+
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+ """
36
+ Classification
37
+ """
38
+ fig = plt.figure(figsize=(9,13))
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+
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+ # Helper funtion to create plots
41
+ def add_image_subplot(rows, columns, subplot_idx, image, fname, prediction_score, prediction_label):
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+ image = image.convert('RGB')
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+ ax = fig.add_subplot(rows, columns, subplot_idx)
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+ ax.imshow(image)
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+ ax.set_title(f"{fname}\n{prediction_label}\n{prediction_score}", fontsize=9)
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+ ax.axis("off")
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+
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+ columns = 4
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+ rows = 5
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+
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+ subplot_idx = 1
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+ plt_cont = 1
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+ cont = 0
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+ cont_arch = 0
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+
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+ for fname in files:
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+ try:
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+ image_path = os.path.join(input_path, fname)
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+
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+ # Load the image
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+ image = Image.open(image_path)
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+
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+ predictions = detector(image, candidate_labels=candidate_labels)
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+
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+ if subplot_idx == 21:
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+ plt.tight_layout()
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+ plt.savefig(f"Result_Images/{os.path.basename(input_path)}_CLIP_predictions_{(subplot_idx-1)*plt_cont}.png", dpi=300, bbox_inches="tight") # Create the Result_Images folder manually
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+
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+ fig = plt.figure(figsize=(9,13))
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+
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+ plt_cont += 1
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+ subplot_idx = 1
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+
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+ if subplot_idx < 21:
75
+ if predictions[0]['label'] == "Archaeological artifact":
76
+ add_image_subplot(rows, columns, subplot_idx, image, fname, predictions[0]['score'], predictions[0]['label'])
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+
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+ cont_arch += 1
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+ subplot_idx += 1
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+
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+ results = {
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+ "ground_truth:": str(fname),
83
+ "prediction_score:": float(predictions[0]['score']),
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+ "prediction_label:": str(predictions[0]['label'])
85
+ }
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+
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+ all_results.append(results)
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+
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+ cont += 1
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+ except:
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+ pass
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+
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+ number_of_images = {
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+ "Original number of images:": int(len(files)),
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+ "Number of images after filtering:": int(cont_arch)
96
+ }
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+
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+ all_results.append(number_of_images)
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+
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+ with output_file.open("w") as f:
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+ json.dump(all_results, f, indent=4)
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+
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+ # Save last 20 images
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+ plt.tight_layout()
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+ plt.savefig(f"Result_Images/{os.path.basename(input_path)}_CLIP_predictions_{(subplot_idx-1)*plt_cont}.png", dpi=300, bbox_inches="tight")
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+
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+ print(cont, "images appended to JSON file.")
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+
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+ """
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+ Move Images
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+ """
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+ labeled_data = Path(f"results_pred_dataset_{os.path.basename(input_path)}.json")
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+
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+ lst_labeled_data = []
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+ cont = 0
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+
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+ with labeled_data.open("r") as f:
118
+ lst_labeled_data = json.load(f)
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+
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+ source_files = sorted([f for f in os.listdir(input_path) if f.endswith(".jpg")])
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+
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+ for i in range(len(lst_labeled_data)):
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+ if lst_labeled_data[i].get('prediction_label:') == "Archaeological artifact":
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+ source_file_path = os.path.join(input_path, lst_labeled_data[i]['ground_truth:'])
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+ cont += 1
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+ shutil.copy2(source_file_path, target_path)
127
+ elif not lst_labeled_data[i].get('prediction_label:'):
128
+ continue
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+
130
+ print("Done!", cont)
README.md ADDED
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+ # Artifact Images Without Background
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+
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+ This dataset contains images of **archaeological artifacts with the background removed**.
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+ The images were generated by filtering and processing the original dataset:
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+
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+ https://huggingface.co/datasets/archaia/dataset_v1
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+
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+ The following sections describe the processing pipeline used to obtain the final dataset, including:
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+
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+ 1. Image filtering using **CLIP**
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+ 2. **Object detection and background removal**
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+
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+ ---
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+
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+ # Processing Pipeline
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+
17
+ ## 1. Image Filtering with CLIP
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+
19
+ The first step filters the images from the original dataset to retain only those containing archaeological artifacts.
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+
21
+ The filtering process is implemented in [`ComputeCls.py`](ComputeCls.py).
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+
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+ ### Execution
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+
25
+ Run the following command:
26
+
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+ ```bash
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+ python ComputeCls.py --input_path [path_to_input_dir]
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+ ```
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+
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+ ### Output
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+
33
+ The script performs the following operations:
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+
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+ - Classifies images using CLIP
36
+ - Generates a JSON file containing classification results
37
+ - Moves images classified as artifacts to a new directory
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+ - Saves visualization plots of images identified as artifacts
39
+ - This step produces a filtered subset containing only artifact-related images.
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+
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+ ## 2. Object Detection and Background Removal
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+
43
+ The second stage detects artifacts in the images and removes their backgrounds.
44
+
45
+ The code is implemented in [`test_finetuned_removebg.py`](test_finetuned_removebg.py).
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+
47
+ ### Execution
48
+
49
+ Run the following command:
50
+
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+ ```bash
52
+ python test_finetuned_removebg.py --input_path [path_to_input_dir] --output_path [path_to_output_dir]
53
+ ```
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+
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+ ### Processing Steps
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+
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+ - The script iterates over each image in the input directory.
58
+ - An object detection model detects potential artifacts in the image.
59
+ - The detection model is a fine-tuned DETR model trained on 303 labeled images.
60
+ Details about the training data and the model checkpoint will be provided in a separate repository.
61
+ - Only detections labeled as "*Archaeological artifacts*" are retained.
62
+ - The detected bounding boxes are used to crop the original images.
63
+ - Since a single image may contain multiple artifacts, each detection is processed independently.
64
+ - For every cropped artifact, the BRIAAI background removal model is applied to remove the background.
65
+
66
+ ### Output
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+
68
+ - The processed images are saved in the specified output directory.
69
+ - If multiple artifacts are detected in the same image, each artifact is saved separately using the following naming convention: original_filename_[detection_id].png
70
+
71
+ - Example:
72
+ - 000000029_0.png
73
+ - 000000029_1.png
74
+ - 000000029_2.png
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+
76
+ - Each output image contains a single archaeological artifact with the background removed.
77
+
78
+ # Result
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+
80
+ The final dataset consists of:
81
+
82
+ - Images containing individual archaeological artifacts
83
+ - Background removed
84
+ - Artifacts automatically extracted from the original dataset using a pipeline based on:
85
+ - CLIP image filtering
86
+ - DETR object detection
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+ - BRIAAI background removal
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Git LFS Details

  • SHA256: d5f44d266ae1ba046a1f9c1b5f8f9c5beb20720b769029cf2a2223fc3607404d
  • Pointer size: 131 Bytes
  • Size of remote file: 767 kB
nobg_filtered_images/00000/000001528_0.png ADDED

Git LFS Details

  • SHA256: dd18c2e7038b8f0f72c9b3cc393dd8d930a05f347da5f172ba81c86e64924418
  • Pointer size: 132 Bytes
  • Size of remote file: 1.15 MB
nobg_filtered_images/00000/000001538_0.png ADDED

Git LFS Details

  • SHA256: 28216db6f04c2f9dc6cd183bed6f503a3395c6e12311b80d1019234170578c0c
  • Pointer size: 131 Bytes
  • Size of remote file: 271 kB
nobg_filtered_images/00000/000001540_0.png ADDED

Git LFS Details

  • SHA256: 24001123ca76a1fd0a3d3a4144bf30dd095c2a494de15c3d9f5f4c9fbe69da72
  • Pointer size: 131 Bytes
  • Size of remote file: 901 kB
nobg_filtered_images/00000/000001758_0.png ADDED

Git LFS Details

  • SHA256: 5427a9b4d1ed9baa0757f679e95084802e45beab900a6e411d99c4df06495cf8
  • Pointer size: 131 Bytes
  • Size of remote file: 260 kB
nobg_filtered_images/00000/000001759_0.png ADDED
nobg_filtered_images/00000/000001782_0.png ADDED

Git LFS Details

  • SHA256: e8418582018821da36f7ee7aa5ca180103f2ef27433c6095cd1a1106409ea987
  • Pointer size: 131 Bytes
  • Size of remote file: 950 kB
nobg_filtered_images/00000/000001783_0.png ADDED

Git LFS Details

  • SHA256: 69d2ed432b363b5772afba887dcddbaee1a546461ce7222034fc604712d687dc
  • Pointer size: 131 Bytes
  • Size of remote file: 703 kB
nobg_filtered_images/00000/000001951_0.png ADDED

Git LFS Details

  • SHA256: 25e5b6f092cc278505eabf28d27279ea10919cafa67863459240faa799bd9618
  • Pointer size: 131 Bytes
  • Size of remote file: 918 kB
nobg_filtered_images/00000/000001964_0.png ADDED
nobg_filtered_images/00000/000001969_0.png ADDED

Git LFS Details

  • SHA256: 8a727972148b74ec0ffef4c9ccb4f11f5002bdfe640d3532b7e9764eb2aa4cf3
  • Pointer size: 132 Bytes
  • Size of remote file: 1.12 MB
nobg_filtered_images/00000/000001972_0.png ADDED

Git LFS Details

  • SHA256: feac8b04481f8edfc79485d536a9fbee577cda3569c717172eb5f7e1bc96ee9a
  • Pointer size: 131 Bytes
  • Size of remote file: 899 kB
nobg_filtered_images/00000/000002018_0.png ADDED

Git LFS Details

  • SHA256: 4a3812c1791f078b34a040868eafb79cef538b3b01d9dd0a01f261fdecf33cda
  • Pointer size: 131 Bytes
  • Size of remote file: 242 kB
nobg_filtered_images/00000/000002028_0.png ADDED

Git LFS Details

  • SHA256: eae4dbbc5fb96f90a60b99a1bf0d5f340677e5516bab4142d5f44ec671e5abe6
  • Pointer size: 131 Bytes
  • Size of remote file: 650 kB
nobg_filtered_images/00000/000002028_1.png ADDED

Git LFS Details

  • SHA256: 50e12dbfc8363b58d96871dfb525dce3d2d3601ad843e14a2e69bf42b60d922a
  • Pointer size: 131 Bytes
  • Size of remote file: 626 kB
nobg_filtered_images/00000/000002033_0.png ADDED

Git LFS Details

  • SHA256: 2f6c7926152273e2244840f43c3b8f49abeb9d42304de50cb9b1cb5c1be3aadb
  • Pointer size: 131 Bytes
  • Size of remote file: 208 kB
nobg_filtered_images/00000/000002033_1.png ADDED

Git LFS Details

  • SHA256: bfddada60652e7567a0b227c5562b81ce0339e624a3931d50987b9d3be06e062
  • Pointer size: 131 Bytes
  • Size of remote file: 208 kB
nobg_filtered_images/00000/000002034_0.png ADDED
nobg_filtered_images/00000/000002068_0.png ADDED

Git LFS Details

  • SHA256: 0a44a785c3ef9f12ce08192d0af7038e01ab2cc54b6a9ef37c031a29a0e791b7
  • Pointer size: 131 Bytes
  • Size of remote file: 565 kB
nobg_filtered_images/00000/000002074_0.png ADDED