Datasets:
Update dataset card with paper link, code link, and metadata
Browse filesHi! I'm Niels, part of the community science team at Hugging Face. I'm opening this PR to improve the documentation of the SupraBench dataset.
This PR updates the dataset card with:
- A link to the research paper on Hugging Face.
- A link to the official GitHub repository.
- Corrected license information (`cc-by-4.0`).
- Added `text-generation` to the `task_categories`.
- Added a sample usage section demonstrating how to run the benchmark code.
README.md
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---
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license:
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tags:
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- chemistry
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- supramolecular
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- host-guest
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- molecular-recognition
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- macrocyclic
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- continued-pretraining
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size_categories:
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configs:
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---
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# SupraBench
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tasks plus an auxiliary vision task, and ships a domain text corpus for
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domain-adaptive pretraining (DAPT).
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> Supramolecular chemistry studies non-covalent host-guest assemblies that
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> underpin drug delivery, chemical sensing, and in-vivo toxin sequestration.
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> Designing host-guest systems is slow (days of dry-lab verification per pair);
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CB[7] supplement, for add-on evaluation). Each `base`/`fewshot`/`cot` rendering is
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tagged by the `prompt_strategy` field.
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## Dataset statistics
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| Task | # Samples |
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| Gemini-3-Flash | **1.248** | **1.679** | **0.498** | **0.647** | **0.350** | **0.470** | **0.506** | 0.067 | 0.118 |
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| DeepSeek-v4 | *1.433* | *1.994* | *0.461* | *0.730* | *0.309* | *0.381* | *0.500* | *0.090* | *0.141* |
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### Few-Shot
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| Model | BAP MAE down | BAP RMSE down | TBS ACC up | TBS Regret down | SID F1 up | SID B.Acc up | HGD Recall up | HGD Prec up | HGD F1 up |
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| Qwen3.5-9B | 3.650 | 4.820 | 0.370 | 0.951 | 0.154 | 0.150 | 0.000 | 0.022 | 0.042 |
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| Qwen3.5-27B | 2.258 | 3.256 | 0.392 | 0.889 | 0.178 | 0.257 | 0.636 | **0.585** | **0.580** |
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| Llama3.1-8B | 5.504 | 6.940 | 0.283 | 1.227 | 0.142 | 0.182 | 0.655 | 0.369 | 0.456 |
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| Llama3.1-70B | 1.774 | 2.359 | 0.354 | 1.026 | 0.144 | 0.185 | 0.631 | *0.474* | *0.531* |
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| GPT-5.4-Mini | 1.958 | 2.808 | 0.430 | 0.824 | 0.141 | *0.291* | 0.542 | 0.228 | 0.307 |
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| GPT-5.4-Nano | 2.176 | 2.894 | 0.419 | 0.819 | 0.190 | 0.270 | 0.532 | 0.095 | 0.152 |
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| Gemini-3-Flash | **1.257** | **1.702** | **0.513** | **0.619** | **0.389** | **0.421** | *0.660* | 0.364 | 0.448 |
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| DeepSeek-v4 | *1.618* | *2.276* | *0.470* | *0.713* | *0.203* | 0.225 | **0.720** | 0.303 | 0.352 |
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### CoT
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| Model | BAP MAE down | BAP RMSE down | TBS ACC up | TBS Regret down | SID F1 up | SID B.Acc up | HGD Recall up | HGD Prec up | HGD F1 up |
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| Qwen3.5-9B | 3.664 | 4.885 | 0.382 | 0.944 | 0.167 | 0.197 | 0.300 | 0.039 | 0.068 |
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| Qwen3.5-27B | 2.438 | 3.468 | 0.398 | 0.898 | 0.254 | *0.415* | **0.526** | 0.051 | 0.092 |
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| Llama3.1-8B | 4.911 | 6.279 | 0.293 | 1.220 | 0.154 | 0.153 | 0.380 | **0.102** | **0.144** |
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| Llama3.1-70B | 1.833 | 2.512 | 0.373 | 0.985 | 0.106 | 0.380 | 0.421 | 0.055 | 0.097 |
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| GPT-5.4-Mini | 2.036 | 2.887 | 0.429 | 0.828 | 0.220 | 0.282 | 0.444 | 0.080 | 0.129 |
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| GPT-5.4-Nano | 2.160 | 2.881 | 0.410 | 0.822 | 0.174 | 0.257 | 0.492 | 0.056 | 0.098 |
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| Gemini-3-Flash | **1.261** | **1.723** | **0.510** | **0.609** | **0.331** | **0.432** | 0.512 | 0.062 | 0.110 |
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| DeepSeek-v4 | *1.541* | *2.183* | *0.445* | *0.743* | *0.307* | 0.414 | *0.522* | *0.080* | *0.134* |
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Takeaways: frontier proprietary LLMs (Gemini-3-Flash, DeepSeek-v4) lead the
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quantitative tasks, yet every task leaves substantial headroom; no single
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prompting strategy is universally best; and CoT amplifies rather than fixes the
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[OPSIN](https://github.com/dan2097/opsin).
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If you use SupraBench, please cite the paper and the upstream data sources.
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---
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license: cc-by-4.0
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size_categories:
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- 100K<n<1M
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task_categories:
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- text-generation
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tags:
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- chemistry
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- supramolecular
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- host-guest
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- molecular-recognition
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- macrocyclic
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- continued-pretraining
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configs:
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- config_name: default
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data_files:
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- split: raw
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path: data/raw-*.parquet
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- split: filtered
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path: data/filtered-*.parquet
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---
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# SupraBench
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tasks plus an auxiliary vision task, and ships a domain text corpus for
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domain-adaptive pretraining (DAPT).
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- 📄 **Paper:** [SupraBench: A Benchmark for Supramolecular Chemistry](https://huggingface.co/papers/2606.13477)
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- 💻 **Code:** [Tianyi-Billy-Ma/SupraBench](https://github.com/Tianyi-Billy-Ma/SupraBench)
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> Supramolecular chemistry studies non-covalent host-guest assemblies that
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> underpin drug delivery, chemical sensing, and in-vivo toxin sequestration.
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> Designing host-guest systems is slow (days of dry-lab verification per pair);
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CB[7] supplement, for add-on evaluation). Each `base`/`fewshot`/`cot` rendering is
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tagged by the `prompt_strategy` field.
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## Sample usage
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To run a task against a model using the provided source code:
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```bash
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uv run python src/main.py \
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--task-config configs/tasks/bap_base.yaml \
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--model-config configs/models/openrouter_qwen35_27b.yaml \
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--output-dir outputs/
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```
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## Dataset statistics
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| Task | # Samples |
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| Gemini-3-Flash | **1.248** | **1.679** | **0.498** | **0.647** | **0.350** | **0.470** | **0.506** | 0.067 | 0.118 |
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| DeepSeek-v4 | *1.433* | *1.994* | *0.461* | *0.730* | *0.309* | *0.381* | *0.500* | *0.090* | *0.141* |
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Takeaways: frontier proprietary LLMs (Gemini-3-Flash, DeepSeek-v4) lead the
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quantitative tasks, yet every task leaves substantial headroom; no single
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prompting strategy is universally best; and CoT amplifies rather than fixes the
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[OPSIN](https://github.com/dan2097/opsin).
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If you use SupraBench, please cite the paper and the upstream data sources.
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## Citation
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```bibtex
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@article{ma2026suprabench,
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title = {SupraBench: A Benchmark for Supramolecular Host--Guest Chemistry Reasoning in Large Language Models},
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author = {Ma, Tianyi and Ma, Yijun and Wang, Zehong and Sun, Weixiang and Li, Ziming and Schmidt, Connor R. and Zhang, Chuxu and Webber, Matthew J. and Ye, Yanfang},
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year = {2026},
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note = {arXiv preprint, link coming soon}
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}
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```
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