raw_data/life/L017/0007-RF01014.stockholm

# STOCKHOLM 1.0
#=GF ID mir-1306
#=GF AC RF01014
#=GF DE microRNA mir-1306
#=GF AU Griffiths-Jones SR; 0000-0001-6043-807X
#=GF GA 70.0
#=GF NC 60.1
#=GF TC 75.7
#=GF SE Griffiths-Jones SR
#=GF SS Predicted; RNAalifold
#=GF TP Gene; miRNA;
#=GF BM cmbuild -F CM SEED
#=GF CB cmcalibrate --mpi CM
#=GF SM cmsearch --cpu 4 --verbose --nohmmonly -T 30.00 -Z 2958934 CM SEQDB
#=GF DR MIPF; MIPF0000531;
#=GF DR SO; 0001244; pre_miRNA;
#=GF DR GO; 0016442; RISC complex;
#=GF DR GO; 0035195; miRNA-mediated post-transcriptional gene silencing;
#=GF RN [1]
#=GF RM 18285502
#=GF RT Application of massively parallel sequencing to microRNA profiling and
#=GF RT discovery in human embryonic stem cells.
#=GF RA Morin RD, O'Connor MD, Griffith M, Kuchenbauer F, Delaney A, Prabhu AL,
#=GF RA Zhao Y, McDonald H, Zeng T, Hirst M, Eaves CJ, Marra MA
#=GF RL Genome Res. 2008;18:610-621.
#=GF RN [2]
#=GF RM 18849523
#=GF RT In-depth characterization of the microRNA transcriptome in a leukemia
#=GF RT progression model.
#=GF RA Kuchenbauer F, Morin RD, Argiropoulos B, Petriv OI, Griffith M, Heuser M,
#=GF RA Yung E, Piper J, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst
#=GF RA M, Hansen CL, Marra MA, Humphries RK
#=GF RL Genome Res. 2008;18:1787-1797.
#=GF RN [3]
#=GF RM 20413612
#=GF RT Mammalian microRNAs: experimental evaluation of novel and previously
#=GF RT annotated genes.
#=GF RA Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston
#=GF RA WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel
#=GF RA DP
#=GF RL Genes Dev. 2010;24:992-1009.
#=GF RN [4]
#=GF RM 30423142
#=GF RT miRBase: from microRNA sequences to function.
#=GF RA Kozomara A, Birgaoanu M, Griffiths-Jones S
#=GF RL Nucleic Acids Res. 2019;47:D155.
#=GF WK MicroRNA
#=GF SQ 19

URS000075D15D_7955/1-69   ---UCCACCACCUCCCCUGCAAACGUCCAGUGACGCAGAGGAAAUGGACGUUAGCUCUGGUGGUGAUGGACA
URS0000D505CF_8665/10-81  GCCUCCACCACCUCCCCUGCAAACGUCCAGUGACGCAGAGGUAAUGGACGUUAGCUCCGGUGGUGAUGGACA
URS0000D51755_8355/8-79   GCCUCCACCACCUCCCCUGCAAACGUCCAGUGACGCAGAGGUAAUGGACGUUGGCUCUGGUGGUGAUGGACA
URS000075E89E_9031/1-69   ---UCCACCACCUCCCCUGCAAACGUCCAGUGACGCAGAGGUAAUGGACGUUGGCUCUGGUGGUGAUGGACA
URS000075E89E_28377/1-69  ---UCCACCACCUCCCCUGCAAACGUCCAGUGACGCAGAGGUAAUGGACGUUGGCUCUGGUGGUGAUGGACA
URS000075B769_9600/8-79   GUCUCCACCACCUCCCCUGCAAACGUCCAGUGGUGCAGAGGUAAUGGACGUUGGCUCUGGUGGUGAUGGACA
URS0000D5216A_9544/1-58   -------CCACCUCCCCUGCAAACGUCCAGUGGUGCAGAGGUAAUGGACGUUGGCUCUGGUGGUG-------
URS000075B769_9606/8-79   GUCUCCACCACCUCCCCUGCAAACGUCCAGUGGUGCAGAGGUAAUGGACGUUGGCUCUGGUGGUGAUGGACA
URS000075BFC1_9598/7-78   GUCUCCACCACCUCCCCUGCAAACGUCCAGUGGUGCAGAGGUAAUGGACGUUGGCUCUGGUGGUGAUGGACA
URS000075C7E3_9593/24-95  GUCUCCACCACCUCCCCUGCAAACGUCCAGUGGUGCAGAGGUAAUGGACGUUGGCUCUGGUGGUGAUGGACA
URS000075ADA3_10029/3-74  GUCUCCACCACCUCCCCUGCAAACGUCCAGUGAUGCAGAGGUAAUGGACGUUGGCUCUGGUGGUGAUGGACA
URS000075EDCD_10090/3-74  GUCUCCACCACCUCCCCUGCAAACGUCCAGUGAUGCAGAGGUAAUGGACGUUGGCUCUGGUGGUGAUGGACA
URS000075EBF6_10116/2-73  GUCUCCACCACCUCCCCUGCAAACGUCCAGUGAUGCAGAGGUAAUGGACGUUGGCUCUGGUGGUGAUGGACA
URS000075E1B7_9823/1-72   GUCUCCACCACCUCCCCUGCAAACGUCCAGUGAUGCAGAGGUAAUGGACGUUGGCUCUGGUGGUGAUGGACA
URS00007E45CD_9925/18-89  GUCUCCACCACCUCCCCUGCAAACGUCCAGUGAUGCAGACGUAAUGGACGUUGGCUCUGGUGGUGAUGGACA
URS00007E3A5A_246437/1-61 -------CCACCUCCCCUGCAAACGUCCAGUGAUGCAGAGGUAAUGGACGUUGGCUCUGGUGGUGAUG----
URS000075B587_9913/1-58   -------CCACCUCCCCUGCAAACGUCCAGUGAUGCAGAGGUAAUGGACGUUGGCUCUGGUGGUG-------
URS000075B587_9615/1-58   -------CCACCUCCCCUGCAAACGUCCAGUGAUGCAGAGGUAAUGGACGUUGGCUCUGGUGGUG-------
URS000075BCD8_8090/48-110 ACCUCCACCACCUCCCCUGCAAACGUCCAGUGACGCAGAGGUAAUGGACGUUAGCUCUGGUGG---------
#=GC SS_cons              ::::::::<<<<-<<---<<-<<<<<<<<---<<______>>-->>>>>>>>->>--->>->>>>:::::::
#=GC RF                   GuCUCCACCACCUCCCCUGCAAACGUCCAGUGacGCAGAGguAAUGGACGUUGGCUCUGGUGGUGAUGGACA
//