diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0001_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0001_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..5b37f932f96841cdc03c66a88c0d29ef8f81fc3c --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0001_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0001_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.48951894296283, + "lat": 13.840037620485688 + }, + "bbox": [ + 100.46636364329925, + 13.81755458033772, + 100.51267424262642, + 13.862520660633656 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0001_label_positive_jitter_packet.png", + "sha256": "c371e9aac09456e088470a3cfd62350fbf3e0a337d27bc5f855b88691ed2d9ce", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0001_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0001_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0001_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0001_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0001_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0001_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0001_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 57.8672, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 244463, + "min": 8.8642, + "max": 91.6156, + "mean": 37.7287, + "median": 34.3835, + "p90": 63.1234 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 29, + "major_roads": 4670, + "schools_waterpoints": 71, + "urban_landuse": 3901, + "water_surface": 7, + "waterways": 41 + }, + "label_counts": { + "vector_label": 23, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0003_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0003_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..58d06cd9b636a14fe7c0dd1b8a56ea970a866350 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0003_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0003_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.53002330911796, + "lat": 13.752986253142012 + }, + "bbox": [ + 100.50687664676062, + 13.730503212994044, + 100.55316997147531, + 13.77546929328998 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0003_label_positive_jitter_packet.png", + "sha256": "f6b7cdbacccee75e9330b5f7719716953ec437099f7aa3392cce533c22fb8b9b", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0003_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0003_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0003_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0003_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0003_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0003_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0003_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 59.8567, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 259137, + "min": 24.649, + "max": 137.0776, + "mean": 82.9951, + "median": 83.9286, + "p90": 114.1602 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 158, + "major_roads": 6875, + "schools_waterpoints": 173, + "urban_landuse": 17377, + "water_surface": 195, + "waterways": 110 + }, + "label_counts": { + "vector_label": 22, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0005_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0005_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..349b7feb56d7a192b82862dfcada55420c269091 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0005_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0005_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.51789641122168, + "lat": 13.7391296435118 + }, + "bbox": [ + 100.49475111820546, + 13.716646603363833, + 100.54104170423791, + 13.761612683659768 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0005_label_positive_jitter_packet.png", + "sha256": "2aa1f1210e3503c833f7a1a71596fc677484ab8fc56c23d3584182c14d8d9245", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0005_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0005_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0005_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0005_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0005_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0005_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0005_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 58.7496, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 252059, + "min": 27.8653, + "max": 162.5874, + "mean": 92.9799, + "median": 89.7957, + "p90": 122.8517 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 198, + "major_roads": 7350, + "schools_waterpoints": 217, + "urban_landuse": 25681, + "water_surface": 131, + "waterways": 182 + }, + "label_counts": { + "vector_label": 25, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0006_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0006_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..f523abfa24461e188b97e5a77e7b3e3e395d6b57 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0006_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0006_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.88489642933703, + "lat": 13.747071640604796 + }, + "bbox": [ + 100.86175035166033, + 13.724588600456828, + 100.90804250701373, + 13.769554680752764 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0006_label_positive_jitter_packet.png", + "sha256": "080423a14a68f197e1e874273d554e63138b6d1d599157fae1e73515f12ef172", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0006_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0006_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0006_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0006_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0006_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0006_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0006_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 56.0607, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 256943, + "min": 0.7611, + "max": 6.1779, + "mean": 2.0065, + "median": 1.6248, + "p90": 3.2162 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 666, + "schools_waterpoints": 1, + "urban_landuse": 13, + "water_surface": 99, + "waterways": 57 + }, + "label_counts": { + "vector_label": 2, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0007_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0007_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..035cc3e9b3bdc5e22ad6fbdd3ddcacbb132beb7a --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0007_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0007_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.68123571066998, + "lat": 13.783910638325201 + }, + "bbox": [ + 100.65808598682814, + 13.761427598177233, + 100.70438543451182, + 13.80639367847317 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0007_label_positive_jitter_packet.png", + "sha256": "76fe9baf2c94f9bc6d3dabc5bb66058ddaaddb3487f8bd1f3bdf33bdd44bce73", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0007_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0007_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0007_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0007_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0007_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0007_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0007_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 59.8653, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 260966, + "min": 11.497, + "max": 115.8054, + "mean": 36.2081, + "median": 33.1704, + "p90": 52.0837 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 12, + "major_roads": 3807, + "schools_waterpoints": 21, + "urban_landuse": 8525, + "water_surface": 53, + "waterways": 91 + }, + "label_counts": { + "vector_label": 3, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0008_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0008_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..2788fc8fce309e7d665cab12045ea672a79d6d73 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0008_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0008_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.57928053704902, + "lat": 13.785189965701768 + }, + "bbox": [ + 100.55613068639228, + 13.7627069255538, + 100.60243038770575, + 13.807673005849736 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0008_label_positive_jitter_packet.png", + "sha256": "f8027b2cf3640a4d31a12700c690a1bd23a2c15833734a1bfad12ddbf794f9df", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0008_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0008_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0008_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0008_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0008_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0008_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0008_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 57.7686, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 262144, + "min": 29.0329, + "max": 144.1489, + "mean": 89.8565, + "median": 89.6195, + "p90": 127.1069 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 43, + "major_roads": 5611, + "schools_waterpoints": 39, + "urban_landuse": 7526, + "water_surface": 72, + "waterways": 97 + }, + "label_counts": { + "vector_label": 10, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0010_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0010_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..ae9779c6d92a383c4e21498d782cb68b2011a681 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0010_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0010_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.55016551631473, + "lat": 13.748045156593143 + }, + "bbox": [ + 100.52701934242148, + 13.725562116445175, + 100.57331169020799, + 13.770528196741111 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0010_label_positive_jitter_packet.png", + "sha256": "6989c43265eed483579872a8788c055e949de068ccbf3d35b3220f081511ab8b", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0010_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0010_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0010_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0010_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0010_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0010_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0010_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 58.5698, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 259845, + "min": 27.846, + "max": 153.0554, + "mean": 87.4326, + "median": 87.7742, + "p90": 117.0139 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 208, + "major_roads": 7263, + "schools_waterpoints": 188, + "urban_landuse": 16891, + "water_surface": 163, + "waterways": 106 + }, + "label_counts": { + "vector_label": 11, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0011_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0011_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..d4c428a9cacce91f9f71b5ad1e2b89c5aceaad0a --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0011_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0011_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.49044132389298, + "lat": 13.678352979299754 + }, + "bbox": [ + 100.46730201906612, + 13.655869939151787, + 100.51358062871984, + 13.700836019447722 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0011_label_positive_jitter_packet.png", + "sha256": "e3d34ebd2619e4685b27e965131095403764e209b8f2b33718af00393f29ff59", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0011_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0011_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0011_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0011_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0011_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0011_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0011_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 61.0704, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 245986, + "min": 10.854, + "max": 130.4911, + "mean": 62.2002, + "median": 63.6685, + "p90": 94.8966 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 14, + "major_roads": 4834, + "schools_waterpoints": 17, + "urban_landuse": 1133, + "water_surface": 6, + "waterways": 168 + }, + "label_counts": { + "vector_label": 11, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0012_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0012_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..dddbe12a21f85d07501dd046584294c8254af8f4 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0012_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0012_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.47918506885884, + "lat": 13.717573584029775 + }, + "bbox": [ + 100.45604190304799, + 13.695090543881808, + 100.50232823466969, + 13.740056624177743 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0012_label_positive_jitter_packet.png", + "sha256": "f3ec7a5a8967f54940f5eb0715ae9fbd9d2d59f1e0f2521f38f00e312f6e7137", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0012_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0012_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0012_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0012_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0012_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0012_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0012_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 55.6584, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 250059, + "min": 30.6666, + "max": 158.2122, + "mean": 97.4123, + "median": 98.2553, + "p90": 138.2581 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 10, + "major_roads": 5729, + "schools_waterpoints": 59, + "urban_landuse": 4117, + "water_surface": 14, + "waterways": 172 + }, + "label_counts": { + "vector_label": 11, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0013_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0013_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..414476f97f3a0641ed424b4f0de0d814b8712607 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0013_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0013_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.5742726271232, + "lat": 13.790151400467185 + }, + "bbox": [ + 100.55112228453581, + 13.767668360319217, + 100.59742296971058, + 13.812634440615152 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0013_label_positive_jitter_packet.png", + "sha256": "7ebc7a1c2b3484feb0d680d26233907ceab23868d485dadc8272c0b85c0b51b2", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0013_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0013_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0013_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0013_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0013_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0013_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0013_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 56.6529, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 262144, + "min": 29.8141, + "max": 144.1339, + "mean": 90.9319, + "median": 89.693, + "p90": 126.1919 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 47, + "major_roads": 5564, + "schools_waterpoints": 39, + "urban_landuse": 6044, + "water_surface": 111, + "waterways": 87 + }, + "label_counts": { + "vector_label": 10, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0014_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0014_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..f5fe45f3a239116b029d609ebbbcc30cc9ace2c5 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0014_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0014_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.59487962493283, + "lat": 13.850931436864668 + }, + "bbox": [ + 100.57172324015845, + 13.8284483967167, + 100.61803600970721, + 13.873414477012636 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0014_label_positive_jitter_packet.png", + "sha256": "69c1936d2d10697915518030bd584866423932f82569ebdae6ca9e0972b4626f", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0014_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0014_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0014_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0014_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0014_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0014_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0014_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 57.1661, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261251, + "min": 15.1084, + "max": 91.7179, + "mean": 49.8858, + "median": 48.097, + "p90": 72.0145 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 15, + "major_roads": 3851, + "schools_waterpoints": 21, + "urban_landuse": 2919, + "water_surface": 67, + "waterways": 38 + }, + "label_counts": { + "vector_label": 7, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0015_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0015_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..36b8772d33349436b11e9ca22b5f59f9421f9628 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0015_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0015_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.85560323247785, + "lat": 13.854245283189904 + }, + "bbox": [ + 100.83244651743176, + 13.831762243041936, + 100.87875994752393, + 13.876728323337872 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0015_label_positive_jitter_packet.png", + "sha256": "ad298be3ed13fe99df9ab7376120b50d3890239b3b2cc5f1001eb81cae58cd34", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0015_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0015_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0015_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0015_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0015_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0015_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0015_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 59.2378, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 262144, + "min": 2.0289, + "max": 16.6436, + "mean": 6.1078, + "median": 5.634, + "p90": 9.5345 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 2175, + "schools_waterpoints": 2, + "urban_landuse": 6393, + "water_surface": 11, + "waterways": 17 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0017_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0017_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..40d596b82d8e49525bf6639863eee864ffc69ad7 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0017_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0017_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.4832204867718, + "lat": 13.843863592497588 + }, + "bbox": [ + 100.46006480611791, + 13.82138055234962, + 100.50637616742569, + 13.866346632645556 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0017_label_positive_jitter_packet.png", + "sha256": "176343b39b39175e3f1bdaa0a94de65af47162d7f2ed47e6b7b2f23a241eef88", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0017_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0017_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0017_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0017_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0017_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0017_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0017_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 58.6188, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 245160, + "min": 8.004, + "max": 78.2194, + "mean": 33.5354, + "median": 30.4188, + "p90": 58.6392 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 29, + "major_roads": 4564, + "schools_waterpoints": 64, + "urban_landuse": 4996, + "water_surface": 7, + "waterways": 35 + }, + "label_counts": { + "vector_label": 21, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0018_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0018_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..744284a4061a8b25b5c26ea71ab22ac46d1b2518 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0018_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0018_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.40522039658144, + "lat": 13.718062447732617 + }, + "bbox": [ + 100.38207718256893, + 13.695579407584649, + 100.42836361059395, + 13.740545487880585 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0018_label_positive_jitter_packet.png", + "sha256": "85185dcd3365abe73622aa2f6f2781dd0a0ad866dfb596a44bcd89f86bc2597a", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0018_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0018_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0018_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0018_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0018_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0018_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0018_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 59.6941, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261729, + "min": 18.348, + "max": 113.2979, + "mean": 45.0904, + "median": 40.5469, + "p90": 68.3327 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 17, + "major_roads": 4279, + "schools_waterpoints": 14, + "urban_landuse": 955, + "water_surface": 21, + "waterways": 157 + }, + "label_counts": { + "vector_label": 5, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0019_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0019_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..8c6458b272a822a572161bc95581fa9e0371e5e2 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0019_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0019_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.77860661457693, + "lat": 13.721579373921223 + }, + "bbox": [ + 100.75546305374219, + 13.699096333773255, + 100.80175017541167, + 13.744062414069191 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0019_label_positive_jitter_packet.png", + "sha256": "c9fbc25cd5e97f81b9be2f238295508d4564d9d11df903da4f1d6f05d830077c", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0019_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0019_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0019_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0019_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0019_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0019_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0019_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 63.2072, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 259494, + "min": 1.4495, + "max": 50.5002, + "mean": 16.33, + "median": 15.5319, + "p90": 32.0695 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 5, + "major_roads": 2630, + "schools_waterpoints": 14, + "urban_landuse": 964, + "water_surface": 108, + "waterways": 108 + }, + "label_counts": { + "vector_label": 4, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0021_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0021_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..da626a830c0888c5328d8944ab8ba432b912a51d --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0021_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0021_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.50964055652986, + "lat": 13.682027098879756 + }, + "bbox": [ + 100.48650089052754, + 13.659544058731788, + 100.53278022253218, + 13.704510139027724 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0021_label_positive_jitter_packet.png", + "sha256": "ef46e5f2a383000dcad1bab6882e96446f6f431c6d41938e96ed187a49858b23", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0021_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0021_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0021_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0021_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0021_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0021_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0021_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 57.6132, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 229475, + "min": 10.905, + "max": 134.977, + "mean": 78.317, + "median": 77.4369, + "p90": 117.9257 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 14, + "major_roads": 4777, + "schools_waterpoints": 32, + "urban_landuse": 12142, + "water_surface": 11, + "waterways": 175 + }, + "label_counts": { + "vector_label": 9, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0022_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0022_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..52e4e3817dd5603afae282999ba32f8f88ce501e --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0022_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0022_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.56099212234069, + "lat": 13.835116311353943 + }, + "bbox": [ + 100.53783731257084, + 13.812633271205975, + 100.58414693211054, + 13.85759935150191 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0022_label_positive_jitter_packet.png", + "sha256": "58cac32151fc0ec09c90e9e17554810c99b1dedd500571b9960086e8e49f35a4", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0022_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0022_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0022_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0022_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0022_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0022_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0022_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 56.3602, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261783, + "min": 27.1462, + "max": 93.6305, + "mean": 63.6386, + "median": 65.2483, + "p90": 79.6684 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 37, + "major_roads": 4736, + "schools_waterpoints": 46, + "urban_landuse": 3695, + "water_surface": 128, + "waterways": 85 + }, + "label_counts": { + "vector_label": 20, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0023_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0023_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..3522cc82be01349af20c8da400e3f48b73cefded --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0023_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0023_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.4394698874116, + "lat": 13.71065027004007 + }, + "bbox": [ + 100.41632740403261, + 13.688167229892102, + 100.4626123707906, + 13.733133310188038 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0023_label_positive_jitter_packet.png", + "sha256": "7c8fc9e5f683ab6971e8f35bbe19db23eb4973dafe84a01a8a444e43339911cb", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0023_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0023_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0023_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0023_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0023_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0023_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0023_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 60.0589, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261802, + "min": 16.6974, + "max": 118.0888, + "mean": 56.4868, + "median": 52.9144, + "p90": 88.1551 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 19, + "major_roads": 4462, + "schools_waterpoints": 25, + "urban_landuse": 2121, + "water_surface": 9, + "waterways": 207 + }, + "label_counts": { + "vector_label": 8, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0024_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0024_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..c65b40c3a360a3465abddb4b64dc75477a1c6197 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0024_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0024_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.40849303272022, + "lat": 13.708965760554436 + }, + "bbox": [ + 100.38535071532633, + 13.686482720406469, + 100.4316353501141, + 13.731448800702404 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0024_label_positive_jitter_packet.png", + "sha256": "0afce84551824e361bcccaf2b62181d78ac61fc453dd3868414e22fea0726bd2", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0024_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0024_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0024_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0024_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0024_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0024_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0024_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 60.3458, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261514, + "min": 18.7789, + "max": 113.3431, + "mean": 47.5441, + "median": 44.0554, + "p90": 70.9055 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 16, + "major_roads": 4433, + "schools_waterpoints": 18, + "urban_landuse": 779, + "water_surface": 18, + "waterways": 135 + }, + "label_counts": { + "vector_label": 7, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0025_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0025_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..7013b4d9ad80bd74291bb6e3685d13555c0efd46 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0025_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0025_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.4609093415691, + "lat": 13.724865886385157 + }, + "bbox": [ + 100.4377654565462, + 13.702382846237189, + 100.48405322659201, + 13.747348926533125 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0025_label_positive_jitter_packet.png", + "sha256": "c23d0f49ecb275474ff01fccd25f502b6995b310978c47609316ca6753ca1d18", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0025_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0025_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0025_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0025_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0025_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0025_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0025_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 57.6033, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261156, + "min": 16.6676, + "max": 156.7495, + "mean": 77.1194, + "median": 76.3288, + "p90": 120.3833 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 21, + "major_roads": 5445, + "schools_waterpoints": 52, + "urban_landuse": 6552, + "water_surface": 23, + "waterways": 200 + }, + "label_counts": { + "vector_label": 8, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0026_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0026_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..45f256ab6d363ddab2074ce51f13526498e66d9d --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0026_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0026_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.55259843450212, + "lat": 13.749181168770209 + }, + "bbox": [ + 100.52945214832269, + 13.72669812862224, + 100.57574472068154, + 13.771664208918176 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0026_label_positive_jitter_packet.png", + "sha256": "6cffa1f33c97eec7af9fbfbe3fe6670a265fd8d6e48da4feaaa0be926c2a8305", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0026_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0026_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0026_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0026_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0026_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0026_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0026_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 58.4934, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 260110, + "min": 27.9058, + "max": 143.3344, + "mean": 86.6809, + "median": 86.7953, + "p90": 117.1111 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 194, + "major_roads": 6994, + "schools_waterpoints": 165, + "urban_landuse": 16038, + "water_surface": 156, + "waterways": 101 + }, + "label_counts": { + "vector_label": 11, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0027_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0027_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..33ae5248cc092d1d2dc9eee4b55d7e7047e65c03 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0027_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0027_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.36208193649942, + "lat": 13.679149468446669 + }, + "bbox": [ + 100.33894255338465, + 13.656666428298701, + 100.38522131961419, + 13.701632508594637 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0027_label_positive_jitter_packet.png", + "sha256": "c1626ecaf1153a29dcaa632cda587308cfa9da837e8a7730b005f8cbc002c732", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0027_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0027_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0027_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0027_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0027_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0027_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0027_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 61.5916, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261280, + "min": 8.085, + "max": 64.2135, + "mean": 27.8866, + "median": 28.0731, + "p90": 42.4698 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 16, + "major_roads": 3374, + "schools_waterpoints": 16, + "urban_landuse": 3138, + "water_surface": 3, + "waterways": 36 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0028_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0028_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..b2a839ab4e5242924c64d786beb901b5c3a934e5 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0028_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0028_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.57171740017273, + "lat": 13.78279154851508 + }, + "bbox": [ + 100.54856778725144, + 13.760308508367112, + 100.59486701309402, + 13.805274588663048 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0028_label_positive_jitter_packet.png", + "sha256": "cd6cff110ec84511349a2c9e13e39387b8bc70096854ca62d3629586a133bb9f", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0028_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0028_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0028_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0028_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0028_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0028_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0028_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 57.9528, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 262144, + "min": 25.8952, + "max": 144.0619, + "mean": 91.3491, + "median": 91.6341, + "p90": 129.3214 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 54, + "major_roads": 5826, + "schools_waterpoints": 54, + "urban_landuse": 9675, + "water_surface": 127, + "waterways": 112 + }, + "label_counts": { + "vector_label": 14, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0029_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0029_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..931efae9bd71c969283bade9ee8fbf57ff05bff1 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0029_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0029_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.66573321752158, + "lat": 13.838167405304993 + }, + "bbox": [ + 100.64257810405189, + 13.815684365157026, + 100.68888833099126, + 13.860650445452961 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0029_label_positive_jitter_packet.png", + "sha256": "243a6eeaa51030f717b60fe2f61cd9f6bcf253ef1b4da124a71b988e006d95f1", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0029_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0029_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0029_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0029_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0029_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0029_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0029_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 58.9811, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 260776, + "min": 10.6937, + "max": 63.5955, + "mean": 32.9968, + "median": 31.105, + "p90": 49.1517 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 29, + "major_roads": 4541, + "schools_waterpoints": 24, + "urban_landuse": 2207, + "water_surface": 36, + "waterways": 57 + }, + "label_counts": { + "vector_label": 2, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0030_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0030_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..b4d71dc644cbc64604367b958ad190b2e9a0497d --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0030_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0030_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.48635608711575, + "lat": 13.837763424148083 + }, + "bbox": [ + 100.46320101386178, + 13.815280384000115, + 100.50951116036973, + 13.86024646429605 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0030_label_positive_jitter_packet.png", + "sha256": "a304746306f6603b6f9e605e27fc11e8194ea13ce5142ab528be5655d463ed34", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0030_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0030_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0030_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0030_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0030_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0030_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0030_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 58.6883, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 243454, + "min": 6.3888, + "max": 84.6556, + "mean": 33.5672, + "median": 30.4143, + "p90": 59.8103 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 26, + "major_roads": 4572, + "schools_waterpoints": 68, + "urban_landuse": 4409, + "water_surface": 7, + "waterways": 43 + }, + "label_counts": { + "vector_label": 21, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0031_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0031_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..75909dffcf03876487ed2708b7735e520683f51f --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0031_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0031_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.60550281673426, + "lat": 13.8794070097384 + }, + "bbox": [ + 100.582343591131, + 13.856923969590433, + 100.62866204233751, + 13.901890049886369 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0031_label_positive_jitter_packet.png", + "sha256": "7f29bbf6666bb7731ba3807142bccbdaaa0ba5e50dff43728623343aa7cf19bc", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0031_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0031_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0031_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0031_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0031_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0031_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0031_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 58.6374, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 262144, + "min": 15.0232, + "max": 91.22, + "mean": 49.3882, + "median": 48.1573, + "p90": 71.0228 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 10, + "major_roads": 3958, + "schools_waterpoints": 13, + "urban_landuse": 2907, + "water_surface": 48, + "waterways": 54 + }, + "label_counts": { + "vector_label": 5, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0033_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0033_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..d55e756d92ec3c33d31efd956437b1b37f2f59d4 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0033_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0033_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.5488380957827, + "lat": 13.746864085102855 + }, + "bbox": [ + 100.52569203861859, + 13.724381044954887, + 100.57198415294681, + 13.769347125250823 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0033_label_positive_jitter_packet.png", + "sha256": "3cf1c49377a0cb33cd46af02d3532242bce0fd46e1fae7af2eb1803cc2b6ec82", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0033_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0033_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0033_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0033_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0033_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0033_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0033_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 58.9408, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 259826, + "min": 27.9523, + "max": 155.4448, + "mean": 87.7612, + "median": 87.6419, + "p90": 117.4317 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 220, + "major_roads": 7364, + "schools_waterpoints": 195, + "urban_landuse": 17696, + "water_surface": 155, + "waterways": 109 + }, + "label_counts": { + "vector_label": 10, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0034_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0034_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..1f229ef5d4c5ffa9bbf610bea76844892179dbd0 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0034_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0034_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.35377657317458, + "lat": 13.676115525182396 + }, + "bbox": [ + 100.33063748824311, + 13.653632485034429, + 100.37691565810606, + 13.698598565330364 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0034_label_positive_jitter_packet.png", + "sha256": "d04217bc75f0501d2cea0cbde3c8ee2e3a2ed7647c6ffa4af09e039a4a75031e", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0034_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0034_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0034_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0034_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0034_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0034_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0034_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 62.3819, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261764, + "min": 4.7594, + "max": 64.2553, + "mean": 25.7666, + "median": 25.0905, + "p90": 41.1992 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 10, + "major_roads": 3225, + "schools_waterpoints": 9, + "urban_landuse": 3653, + "water_surface": 3, + "waterways": 28 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0036_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0036_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..7e29afaf6efc316f87ee7a5fd47520cd69011a6c --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0036_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0036_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.41204307931692, + "lat": 13.925164621662665 + }, + "bbox": [ + 100.3888792753183, + 13.902681581514697, + 100.43520688331553, + 13.947647661810633 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0036_label_positive_jitter_packet.png", + "sha256": "cb999cd6f4baee65fdd1bc8b9a02357cd8bcdb605f8e0e377d92eecfbc4ea9d1", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0036_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0036_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0036_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0036_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0036_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0036_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0036_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 62.8515, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261389, + "min": 4.7819, + "max": 33.5357, + "mean": 13.4204, + "median": 12.6171, + "p90": 20.0622 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 3398, + "schools_waterpoints": 6, + "urban_landuse": 349, + "water_surface": 8, + "waterways": 28 + }, + "label_counts": { + "vector_label": 3, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0037_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0037_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..ca82ec6daff78ba52cf870380e3acbc82963bcf0 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0037_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0037_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.53047579492082, + "lat": 13.736741773826168 + }, + "bbox": [ + 100.50733073772611, + 13.7142587336782, + 100.55362085211553, + 13.759224813974136 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0037_label_positive_jitter_packet.png", + "sha256": "f2baad508e5293cb63273ca8faf42e0aedb3d88da17775d16bdbdc8ab0f34b57", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0037_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0037_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0037_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0037_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0037_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0037_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0037_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 59.4528, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 253944, + "min": 27.4012, + "max": 162.59, + "mean": 90.6626, + "median": 87.6074, + "p90": 126.1028 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 229, + "major_roads": 7805, + "schools_waterpoints": 211, + "urban_landuse": 24770, + "water_surface": 165, + "waterways": 155 + }, + "label_counts": { + "vector_label": 25, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0038_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0038_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..03746954b298f733ae50bcc938bb9da988c8a1bc --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0038_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0038_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.5673659507902, + "lat": 13.680959075505967 + }, + "bbox": [ + 100.54422638978832, + 13.658476035358, + 100.59050551179209, + 13.703442115653935 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0038_label_positive_jitter_packet.png", + "sha256": "f7acb58254a9938ad527709e52a3e1ca06f37e9a9b98d4306db1bff08f901584", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0038_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0038_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0038_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0038_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0038_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0038_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0038_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 58.9428, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 210632, + "min": 8.1444, + "max": 98.2946, + "mean": 28.3604, + "median": 19.6542, + "p90": 67.7153 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 9, + "major_roads": 1871, + "schools_waterpoints": 16, + "urban_landuse": 6005, + "water_surface": 207, + "waterways": 177 + }, + "label_counts": { + "vector_label": 4, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0040_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0040_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..9dfda160c06cbe1d1a9e0bc560c258860ff4c529 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0040_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0040_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.52609338209523, + "lat": 13.775308742165262 + }, + "bbox": [ + 100.50294451059118, + 13.752825702017294, + 100.54924225359927, + 13.79779178231323 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0040_label_positive_jitter_packet.png", + "sha256": "cb7b7648d69a7b9eb29680056951bc8f63f6c29303c2fbd3ba0923251fe480b3", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0040_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0040_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0040_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0040_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0040_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0040_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0040_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 57.4606, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 255658, + "min": 24.4891, + "max": 136.5116, + "mean": 84.7387, + "median": 88.8773, + "p90": 111.9825 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 80, + "major_roads": 6500, + "schools_waterpoints": 110, + "urban_landuse": 11536, + "water_surface": 204, + "waterways": 95 + }, + "label_counts": { + "vector_label": 4, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0042_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0042_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..ae5dd9d30b1dd59431c02b2315da728ec52c1ad9 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0042_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0042_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.51714548191458, + "lat": 13.871298910754598 + }, + "bbox": [ + 100.49398706585887, + 13.84881587060663, + 100.54030389797029, + 13.893781950902566 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0042_label_positive_jitter_packet.png", + "sha256": "010dc456f65428bc77a816b56bce92b4ad78762f36842dfbcd31398e93cddcab", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0042_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0042_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0042_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0042_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0042_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0042_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0042_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 57.7344, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261604, + "min": 16.0046, + "max": 81.7078, + "mean": 48.9092, + "median": 49.36, + "p90": 67.1192 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 17, + "major_roads": 4644, + "schools_waterpoints": 19, + "urban_landuse": 639, + "water_surface": 30, + "waterways": 41 + }, + "label_counts": { + "vector_label": 4, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0043_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0043_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..bcf6548835d0eabe5bcce5167c042f81f2b5e11a --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0043_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0043_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.6046226328612, + "lat": 13.71190825851867 + }, + "bbox": [ + 100.58148002551025, + 13.689425218370703, + 100.62776524021214, + 13.734391298666639 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0043_label_positive_jitter_packet.png", + "sha256": "4e45b547b87792a776504a75676f0bce1a9b3eda637430cf784d8814ed601b8a", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0043_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0043_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0043_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0043_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0043_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0043_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0043_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 57.1987, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 257319, + "min": 14.7132, + "max": 110.3094, + "mean": 70.6116, + "median": 72.3943, + "p90": 91.2469 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 29, + "major_roads": 4082, + "schools_waterpoints": 33, + "urban_landuse": 2717, + "water_surface": 11, + "waterways": 77 + }, + "label_counts": { + "vector_label": 5, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0044_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0044_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..778ebe3891ea3610f637f5e712fff199888b0b11 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0044_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0044_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.5433365926583, + "lat": 13.802296829047018 + }, + "bbox": [ + 100.52018504502003, + 13.77981378889905, + 100.56648814029658, + 13.824779869194986 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0044_label_positive_jitter_packet.png", + "sha256": "e34177cd2c8c433393cd8da586377e9735e63fccb96b8e2a6378f2b7920e9ec2", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0044_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0044_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0044_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0044_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0044_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0044_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0044_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 56.9124, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261802, + "min": 27.1514, + "max": 143.9896, + "mean": 82.2234, + "median": 84.2538, + "p90": 101.5825 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 29, + "major_roads": 5764, + "schools_waterpoints": 39, + "urban_landuse": 5780, + "water_surface": 116, + "waterways": 122 + }, + "label_counts": { + "vector_label": 9, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0045_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0045_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..d80a6aaa0c528a2fee141ead5b5da933a6f00071 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0045_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0045_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.7826385666323, + "lat": 13.824785888433262 + }, + "bbox": [ + 100.75948478458558, + 13.802302848285294, + 100.80579234867902, + 13.84726892858123 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0045_label_positive_jitter_packet.png", + "sha256": "73b96c132dd8e2d7478aba13a7e042b985638d956cbe6f60169147f5ac25bf1c", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0045_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0045_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0045_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0045_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0045_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0045_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0045_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 56.2232, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261071, + "min": 3.6703, + "max": 24.5361, + "mean": 10.2401, + "median": 10.0494, + "p90": 14.7354 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 1579, + "schools_waterpoints": 2, + "urban_landuse": 855, + "water_surface": 14, + "waterways": 17 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0046_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0046_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..d285ac4c1676f2f954c92fb59c9ab6647d6a70a6 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0046_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0046_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.47099436014356, + "lat": 13.752614033906246 + }, + "bbox": [ + 100.44784773458957, + 13.730130993758278, + 100.49414098569756, + 13.775097074054214 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0046_label_positive_jitter_packet.png", + "sha256": "358426211ee481bbe253b0debc3c6c82cc5d91b3aaaf3cddf4f35cffbb5e8237", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0046_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0046_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0046_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0046_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0046_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0046_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0046_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 56.9107, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 251019, + "min": 20.4857, + "max": 162.4558, + "mean": 82.0554, + "median": 85.1095, + "p90": 120.4466 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 14, + "major_roads": 5085, + "schools_waterpoints": 74, + "urban_landuse": 7091, + "water_surface": 32, + "waterways": 180 + }, + "label_counts": { + "vector_label": 5, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0047_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0047_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..f90e9b492dc287cd303cb2d238f5aeb7618e848a --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0047_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0047_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.5639016223958, + "lat": 13.851456038495959 + }, + "bbox": [ + 100.54074518534323, + 13.828972998347991, + 100.58705805944838, + 13.873939078643927 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0047_label_positive_jitter_packet.png", + "sha256": "48e8104eb25a53874ea4691b96ca16e9b9c9d940fcdbc5a08c7096f68b1c7bc8", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0047_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0047_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0047_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0047_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0047_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0047_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0047_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 56.7839, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 262144, + "min": 25.0573, + "max": 91.6997, + "mean": 59.527, + "median": 60.5941, + "p90": 75.3552 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 18, + "major_roads": 4531, + "schools_waterpoints": 40, + "urban_landuse": 3185, + "water_surface": 119, + "waterways": 74 + }, + "label_counts": { + "vector_label": 22, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0048_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0048_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..e4f525827f6395bbfb00657290ee6c1f157b1a2e --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0048_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0048_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.53875807791638, + "lat": 13.797389756982712 + }, + "bbox": [ + 100.51560701729065, + 13.774906716834744, + 100.56190913854212, + 13.81987279713068 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0048_label_positive_jitter_packet.png", + "sha256": "7af740ca644dd895b5dc5c0065fde3a29a6b0f2a20386630f4d140e6161517d3", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0048_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0048_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0048_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0048_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0048_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0048_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0048_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 57.1121, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 256843, + "min": 27.2867, + "max": 139.846, + "mean": 80.6755, + "median": 83.456, + "p90": 100.2938 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 42, + "major_roads": 5993, + "schools_waterpoints": 56, + "urban_landuse": 7853, + "water_surface": 197, + "waterways": 129 + }, + "label_counts": { + "vector_label": 12, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0049_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0049_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..954acd2ad1e3269b19e420c560672ad158dd3fed --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0049_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0049_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.47995094684725, + "lat": 13.71440834633289 + }, + "bbox": [ + 100.45680809308116, + 13.691925306184922, + 100.50309380061334, + 13.736891386480858 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0049_label_positive_jitter_packet.png", + "sha256": "e8aba7fcc25618a8efa738d6ec4c2339528316d524dc5d901544fc11297eed94", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0049_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0049_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0049_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0049_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0049_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0049_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0049_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 55.8114, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 250516, + "min": 30.6797, + "max": 158.2627, + "mean": 96.7613, + "median": 96.8874, + "p90": 138.2121 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 10, + "major_roads": 5645, + "schools_waterpoints": 51, + "urban_landuse": 3534, + "water_surface": 11, + "waterways": 180 + }, + "label_counts": { + "vector_label": 11, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0050_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0050_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..ce6ff10ad075f9543a70889d91db0432d014c168 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0050_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0050_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.58163305351503, + "lat": 13.706984603572087 + }, + "bbox": [ + 100.55849093130811, + 13.684501563424119, + 100.60477517572195, + 13.729467643720055 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0050_label_positive_jitter_packet.png", + "sha256": "9f93a67bb18ebad206dd63c9a6408c5d9cf784898021777a21b9b1d382d43a38", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0050_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0050_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0050_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0050_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0050_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0050_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0050_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 60.3613, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 240572, + "min": 8.173, + "max": 110.0082, + "mean": 66.6722, + "median": 77.7448, + "p90": 95.3343 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 55, + "major_roads": 3776, + "schools_waterpoints": 66, + "urban_landuse": 5414, + "water_surface": 20, + "waterways": 90 + }, + "label_counts": { + "vector_label": 6, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0051_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0051_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..87410b19e91fb2c0881fa6c02888c62799587477 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0051_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0051_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.54670683446203, + "lat": 13.734844591197552 + }, + "bbox": [ + 100.52356196459742, + 13.712361551049584, + 100.56985170432664, + 13.75732763134552 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0051_label_positive_jitter_packet.png", + "sha256": "6be43487c03b12af967e8ebdc4aa17b3d171ac5fe0e6ea924c59012908946f70", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0051_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0051_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0051_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0051_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0051_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0051_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0051_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 59.5487, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 259911, + "min": 27.9075, + "max": 162.553, + "mean": 87.8246, + "median": 86.9315, + "p90": 118.6207 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 213, + "major_roads": 7640, + "schools_waterpoints": 200, + "urban_landuse": 19199, + "water_surface": 166, + "waterways": 137 + }, + "label_counts": { + "vector_label": 10, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0052_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0052_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..c6d0bd4f87e132315da192ff20831ab929f09943 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0052_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0052_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.57403805883129, + "lat": 13.776965658272227 + }, + "bbox": [ + 100.55088902319352, + 13.754482618124259, + 100.59718709446906, + 13.799448698420195 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0052_label_positive_jitter_packet.png", + "sha256": "b19503d2ff7bb349d865c52fad8511841709b769cce847888156df363418efba", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0052_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0052_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0052_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0052_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0052_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0052_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0052_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 58.9533, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 262144, + "min": 25.6576, + "max": 144.0646, + "mean": 87.6952, + "median": 88.2724, + "p90": 129.0393 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 53, + "major_roads": 5766, + "schools_waterpoints": 47, + "urban_landuse": 10397, + "water_surface": 112, + "waterways": 133 + }, + "label_counts": { + "vector_label": 11, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0055_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0055_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..0dd27dc81459c7688adac30464a18020be958299 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0055_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0055_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.4768637996135, + "lat": 13.757844367746525 + }, + "bbox": [ + 100.45371665680752, + 13.735361327598557, + 100.50001094241948, + 13.780327407894493 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0055_label_positive_jitter_packet.png", + "sha256": "278c7128e096eb826fb4d94567c89b553462393779bf39ee698bd9711c311896", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0055_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0055_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0055_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0055_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0055_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0055_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0055_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 57.1473, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 244115, + "min": 22.1161, + "max": 162.5841, + "mean": 89.2035, + "median": 89.4749, + "p90": 124.6962 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 44, + "major_roads": 4879, + "schools_waterpoints": 93, + "urban_landuse": 9453, + "water_surface": 38, + "waterways": 193 + }, + "label_counts": { + "vector_label": 10, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0056_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0056_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..454d9e898fd0653e1bf957295b12fc008151a59e --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0056_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0056_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.50852903333274, + "lat": 13.73008058417238 + }, + "bbox": [ + 100.48538463374669, + 13.707597544024413, + 100.53167343291878, + 13.752563624320349 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0056_label_positive_jitter_packet.png", + "sha256": "43e30aec59e9751824835f1cbd318e344ed87889a9c72ec40b08ba5f3595ad98", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0056_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0056_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0056_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0056_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0056_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0056_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0056_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 56.8888, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 243493, + "min": 38.4808, + "max": 162.5376, + "mean": 101.2451, + "median": 95.7399, + "p90": 138.0712 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 122, + "major_roads": 6644, + "schools_waterpoints": 191, + "urban_landuse": 22840, + "water_surface": 82, + "waterways": 201 + }, + "label_counts": { + "vector_label": 25, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0057_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0057_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..4d860c41c72b70034237e1cebce09b7667be67ff --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0057_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0057_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.58539571179108, + "lat": 13.680462349784484 + }, + "bbox": [ + 100.56225619962065, + 13.657979309636517, + 100.60853522396151, + 13.702945389932452 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0057_label_positive_jitter_packet.png", + "sha256": "057ea34cb829fdaec8569bcbd994d07cdb3197802b68fc3e8e220163b865fc0d", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0057_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0057_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0057_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0057_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0057_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0057_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0057_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 59.7211, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 229161, + "min": 8.195, + "max": 110.3548, + "mean": 42.0528, + "median": 39.4119, + "p90": 83.2892 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 8, + "major_roads": 2576, + "schools_waterpoints": 16, + "urban_landuse": 2253, + "water_surface": 113, + "waterways": 97 + }, + "label_counts": { + "vector_label": 5, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0059_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0059_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..ca395b337c4f0c8bc8eaa37913bb6cbf73d50fb3 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0059_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0059_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.43083566458886, + "lat": 13.70068119072951 + }, + "bbox": [ + 100.40769416319895, + 13.678198150581542, + 100.45397716597876, + 13.723164230877478 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0059_label_positive_jitter_packet.png", + "sha256": "8595b9158dd67435e7b9ad5c6fe7ee6a6a47e39f389ae3d5c892700058b98e79", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0059_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0059_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0059_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0059_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0059_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0059_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0059_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 60.6073, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261802, + "min": 16.7287, + "max": 113.4246, + "mean": 53.1122, + "median": 49.7526, + "p90": 82.874 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 17, + "major_roads": 4268, + "schools_waterpoints": 25, + "urban_landuse": 758, + "water_surface": 2, + "waterways": 134 + }, + "label_counts": { + "vector_label": 11, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0060_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0060_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..03e1e2d4d3b70b43efca7ba89e6914fb2610b4f4 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0060_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0060_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.57736898257417, + "lat": 13.781361092148236 + }, + "bbox": [ + 100.55421951142067, + 13.758878052000268, + 100.60051845372767, + 13.803844132296204 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0060_label_positive_jitter_packet.png", + "sha256": "31cec4cf586b38ad435b83c93d4829e9115fc391b1e72fd557415033665f5621", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0060_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0060_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0060_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0060_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0060_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0060_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0060_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 58.5354, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 262144, + "min": 25.6436, + "max": 144.0913, + "mean": 89.1218, + "median": 89.6135, + "p90": 128.0017 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 52, + "major_roads": 5670, + "schools_waterpoints": 43, + "urban_landuse": 9652, + "water_surface": 84, + "waterways": 124 + }, + "label_counts": { + "vector_label": 11, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0061_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0061_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..520786c9bbd27a3aa3f86ae1290b92b7741cf204 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0061_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0061_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.5163571092968, + "lat": 13.665411488060696 + }, + "bbox": [ + 100.49321907580445, + 13.642928447912729, + 100.53949514278916, + 13.687894528208664 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0061_label_positive_jitter_packet.png", + "sha256": "c3c39e7b3a4653493c3aef27db3ae90c57f51996cc6089942d9767c6d9f97e6e", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0061_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0061_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0061_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0061_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0061_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0061_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0061_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 59.4251, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 226723, + "min": 21.3027, + "max": 117.094, + "mean": 57.4791, + "median": 54.9288, + "p90": 84.455 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 13, + "major_roads": 4461, + "schools_waterpoints": 24, + "urban_landuse": 7936, + "water_surface": 16, + "waterways": 151 + }, + "label_counts": { + "vector_label": 3, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0062_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0062_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..483a162e2cf56bd6729d0c6d06b1b27c4e4db8fa --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0062_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0062_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.51879163952361, + "lat": 13.752964900510673 + }, + "bbox": [ + 100.49564497927756, + 13.730481860362705, + 100.54193829976967, + 13.77544794065864 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0062_label_positive_jitter_packet.png", + "sha256": "b36687f3bb4dc0c0044b11f48d3ac5ddee2634ecbaf1c22968c195d109602e42", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0062_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0062_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0062_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0062_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0062_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0062_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0062_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 58.9301, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 253226, + "min": 24.7564, + "max": 127.7437, + "mean": 82.1151, + "median": 83.0688, + "p90": 112.0256 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 156, + "major_roads": 6610, + "schools_waterpoints": 220, + "urban_landuse": 22184, + "water_surface": 164, + "waterways": 133 + }, + "label_counts": { + "vector_label": 24, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0064_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0064_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..095b51d9ba850e2837885cf2cf530a3f7f0e8f54 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0064_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0064_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.74845525258833, + "lat": 13.726966666137459 + }, + "bbox": [ + 100.72531116029565, + 13.704483625989491, + 100.77159934488101, + 13.749449706285427 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0064_label_positive_jitter_packet.png", + "sha256": "6fd24bcaeee15e3ab52d6fd175e2324e67a07a4054bcccd21ae6151c868a6fda", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0064_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0064_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0064_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0064_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0064_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0064_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0064_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 63.4054, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261194, + "min": 1.6148, + "max": 50.5043, + "mean": 18.9612, + "median": 19.7221, + "p90": 32.003 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 2932, + "schools_waterpoints": 8, + "urban_landuse": 1022, + "water_surface": 112, + "waterways": 91 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0066_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0066_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..a5543a5ca9b0afe50d8de26824a6ca2cce1c9f6d --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0066_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0066_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.61966724822227, + "lat": 13.779540781627233 + }, + "bbox": [ + 100.59651795745035, + 13.757057741479265, + 100.6428165389942, + 13.802023821775201 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0066_label_positive_jitter_packet.png", + "sha256": "7b040329e86fe289616415488f654d46f5700503dfea2f3659017c4fa5a60955", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0066_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0066_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0066_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0066_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0066_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0066_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0066_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 57.3296, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261612, + "min": 22.118, + "max": 134.0627, + "mean": 84.6365, + "median": 85.4821, + "p90": 111.9648 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 16, + "major_roads": 4262, + "schools_waterpoints": 16, + "urban_landuse": 1765, + "water_surface": 12, + "waterways": 49 + }, + "label_counts": { + "vector_label": 3, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0067_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0067_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..0fa1f8681a2cf7c798812c3d010c0efb30ab0e94 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0067_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0067_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.56390333238618, + "lat": 13.85092715375987 + }, + "bbox": [ + 100.5407469480386, + 13.828444113611901, + 100.58705971673375, + 13.873410193907837 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0067_label_positive_jitter_packet.png", + "sha256": "367591a2ea0e6ba266688dd109e1bf74031bcb877d4e8705e321ece68874e320", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0067_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0067_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0067_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0067_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0067_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0067_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0067_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 56.7733, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 262144, + "min": 25.0697, + "max": 91.6987, + "mean": 59.7149, + "median": 60.8187, + "p90": 75.6046 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 25, + "major_roads": 4543, + "schools_waterpoints": 40, + "urban_landuse": 3208, + "water_surface": 119, + "waterways": 75 + }, + "label_counts": { + "vector_label": 22, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0069_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0069_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..164b1c42305ee07cfaf7adf1943c34c3d304b6c0 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0069_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0069_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.7780445375923, + "lat": 13.826948231577774 + }, + "bbox": [ + 100.7548905404945, + 13.804465191429806, + 100.80119853469009, + 13.849431271725742 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0069_label_positive_jitter_packet.png", + "sha256": "6c5c66bcd645187d2be60eb1b5dd19a2cd2237313efe5a532bd1d92e65ddeeb9", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0069_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0069_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0069_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0069_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0069_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0069_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0069_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 56.8553, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 260548, + "min": 3.4893, + "max": 30.0818, + "mean": 10.2293, + "median": 9.9467, + "p90": 14.923 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 1561, + "schools_waterpoints": 2, + "urban_landuse": 902, + "water_surface": 13, + "waterways": 20 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0070_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0070_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..0ac846c8b8eed1b75c34badb3cf2bedeb70149c3 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0070_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0070_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.46794828183643, + "lat": 13.688324882314392 + }, + "bbox": [ + 100.44480799649813, + 13.665841842166424, + 100.49108856717473, + 13.71080792246236 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0070_label_positive_jitter_packet.png", + "sha256": "3a3464a3ef8205596c2476d79f41a875d096191f26695aa0967d41ef1b127102", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0070_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0070_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0070_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0070_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0070_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0070_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0070_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 61.0794, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 257791, + "min": 16.6578, + "max": 156.9836, + "mean": 60.6224, + "median": 59.2686, + "p90": 86.0018 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 7, + "major_roads": 4803, + "schools_waterpoints": 16, + "urban_landuse": 814, + "water_surface": 2, + "waterways": 166 + }, + "label_counts": { + "vector_label": 5, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0071_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0071_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..767a0153753279bcfd60c6ce03253d4f3cf9ada5 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0071_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0071_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.4559011814307, + "lat": 13.701203585034913 + }, + "bbox": [ + 100.4327596286026, + 13.678720544886945, + 100.47904273425881, + 13.72368662518288 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0071_label_positive_jitter_packet.png", + "sha256": "296625414e96ee2e40f71d46bbb02a8f6f7926aaf1bf742658648af44da09c53", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0071_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0071_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0071_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0071_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0071_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0071_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0071_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 59.6923, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 260567, + "min": 16.7334, + "max": 150.0582, + "mean": 63.0474, + "median": 59.5379, + "p90": 97.5244 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 22, + "major_roads": 4616, + "schools_waterpoints": 29, + "urban_landuse": 1320, + "water_surface": 0, + "waterways": 151 + }, + "label_counts": { + "vector_label": 8, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0072_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0072_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..dc1b54aa19868e79e5ae842cde0e2784e6eb551b --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0072_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0072_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.64612701703203, + "lat": 13.699656305987002 + }, + "bbox": [ + 100.62298561655241, + 13.677173265839034, + 100.66926841751165, + 13.72213934613497 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0072_label_positive_jitter_packet.png", + "sha256": "24b1870072f9b7691b706d4122209d46837af5ef61cf1bc022807be2155c55ea", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0072_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0072_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0072_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0072_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0072_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0072_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0072_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 61.0454, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 255920, + "min": 9.2633, + "max": 93.5033, + "mean": 42.0496, + "median": 40.0037, + "p90": 70.6797 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 4, + "major_roads": 3831, + "schools_waterpoints": 9, + "urban_landuse": 1378, + "water_surface": 55, + "waterways": 39 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0073_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0073_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..e533cae5369aa5f1b586cdfac7b14551dd858eee --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0073_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0073_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.5571170506966, + "lat": 13.76813489292213 + }, + "bbox": [ + 100.5339688895822, + 13.745651852774163, + 100.58026521181101, + 13.790617933070099 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0073_label_positive_jitter_packet.png", + "sha256": "3a1fd395c99a4105fa7f8364a1a21954e59ac69df8872a1d4321e91550010d41", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0073_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0073_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0073_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0073_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0073_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0073_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0073_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 57.6852, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261766, + "min": 26.5819, + "max": 144.1382, + "mean": 94.4229, + "median": 95.4322, + "p90": 129.019 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 122, + "major_roads": 6875, + "schools_waterpoints": 67, + "urban_landuse": 13666, + "water_surface": 154, + "waterways": 132 + }, + "label_counts": { + "vector_label": 17, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0074_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0074_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..c5dfcdf19febb2d6fc036ae0cccca499dca599c5 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0074_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0074_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.57490476238468, + "lat": 13.710000963428422 + }, + "bbox": [ + 100.55176234298852, + 13.687517923280454, + 100.59804718178083, + 13.73248400357639 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0074_label_positive_jitter_packet.png", + "sha256": "b5ebe52bc7240b3e1230f517c0a820bad2561215948631e7adee5e5dd79a4547", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0074_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0074_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0074_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0074_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0074_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0074_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0074_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 60.4991, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 234760, + "min": 8.3852, + "max": 140.1901, + "mean": 68.1145, + "median": 80.6189, + "p90": 95.7416 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 56, + "major_roads": 3781, + "schools_waterpoints": 84, + "urban_landuse": 7590, + "water_surface": 34, + "waterways": 79 + }, + "label_counts": { + "vector_label": 8, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0075_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0075_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..059b7896771354bfe815de2c399260fcdb9373d6 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0075_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0075_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.57959200040276, + "lat": 13.847584866391898 + }, + "bbox": [ + 100.55643594907332, + 13.82510182624393, + 100.60274805173219, + 13.870067906539866 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0075_label_positive_jitter_packet.png", + "sha256": "569e7d2d7ec0dd6b6d9969470e30ac5776089cb755999208606ffc058ed655df", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0075_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0075_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0075_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0075_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0075_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0075_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0075_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 58.0336, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261593, + "min": 15.1288, + "max": 91.7161, + "mean": 56.4472, + "median": 57.5089, + "p90": 76.3498 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 22, + "major_roads": 4225, + "schools_waterpoints": 32, + "urban_landuse": 3736, + "water_surface": 100, + "waterways": 80 + }, + "label_counts": { + "vector_label": 25, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0076_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0076_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..601a14e6e8837fe69e5c941a7d30752bb050428e --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0076_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0076_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.56741054999705, + "lat": 13.851549907759928 + }, + "bbox": [ + 100.54425410358988, + 13.82906686761196, + 100.59056699640422, + 13.874032947907896 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0076_label_positive_jitter_packet.png", + "sha256": "cc21574c9523b1a9ec1e3a2e51ed798b7e8e7264895c031ba6f7ee36ef5b647c", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0076_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0076_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0076_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0076_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0076_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0076_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0076_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 57.0231, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 262144, + "min": 25.197, + "max": 91.7081, + "mean": 59.0368, + "median": 59.8966, + "p90": 74.7877 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 17, + "major_roads": 4450, + "schools_waterpoints": 40, + "urban_landuse": 3336, + "water_surface": 124, + "waterways": 75 + }, + "label_counts": { + "vector_label": 22, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0078_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0078_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..21383de86df59c10e37c077eac80f3dcacb0f8d4 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0078_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0078_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.36154150367315, + "lat": 13.777666815199117 + }, + "bbox": [ + 100.33839239857241, + 13.75518377505115, + 100.3846906087739, + 13.800149855347085 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0078_label_positive_jitter_packet.png", + "sha256": "676c17206dbfa2158e09b276567c1a323be2d9a2313245eff0be5444b340c763", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0078_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0078_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0078_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0078_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0078_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0078_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0078_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 60.2948, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261173, + "min": 4.8203, + "max": 30.8683, + "mean": 11.3004, + "median": 10.8829, + "p90": 15.6344 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 3118, + "schools_waterpoints": 4, + "urban_landuse": 817, + "water_surface": 16, + "waterways": 66 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0079_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0079_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..4f9c71737e61a62a7a9cf257cf98b24854109a33 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0079_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0079_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.51150027647266, + "lat": 13.85797075776498 + }, + "bbox": [ + 100.48834319002654, + 13.835487717617012, + 100.53465736291878, + 13.880453797912947 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0079_label_positive_jitter_packet.png", + "sha256": "7f4c584e90317efd229c1893166f5fa76ceb84e06f2f305fdc4f8ba67e11e2e2", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0079_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0079_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0079_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0079_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0079_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0079_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0079_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 58.0175, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 257960, + "min": 15.9006, + "max": 81.8024, + "mean": 51.0876, + "median": 51.3373, + "p90": 67.3263 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 28, + "major_roads": 4659, + "schools_waterpoints": 37, + "urban_landuse": 1059, + "water_surface": 29, + "waterways": 33 + }, + "label_counts": { + "vector_label": 24, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0080_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0080_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..b7a56e35e6b72095e9fd5e4d7303612074217f5b --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0080_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0080_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.48913839032424, + "lat": 13.724330305796117 + }, + "bbox": [ + 100.4659945581379, + 13.70184726564815, + 100.51228222251059, + 13.746813345944085 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0080_label_positive_jitter_packet.png", + "sha256": "b84a4f32e9214baa0054b5db37f7723841a7bd585de4ccefbef02e9cb9d980fb", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0080_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0080_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0080_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0080_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0080_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0080_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0080_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 54.842, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 241821, + "min": 31.3204, + "max": 158.1473, + "mean": 104.3278, + "median": 105.5509, + "p90": 138.7569 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 19, + "major_roads": 5724, + "schools_waterpoints": 91, + "urban_landuse": 8275, + "water_surface": 26, + "waterways": 189 + }, + "label_counts": { + "vector_label": 6, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0081_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0081_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..2095ef8bd8cccb6693500a7a31084230f75fae49 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0081_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0081_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.49316284655603, + "lat": 13.838679223098211 + }, + "bbox": [ + 100.47000768213381, + 13.816196182950243, + 100.51631801097825, + 13.861162263246179 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0081_label_positive_jitter_packet.png", + "sha256": "cfa6329328f61dc8da29777319c3b400ef861b2eaa69ca0510f5098341e93ca5", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0081_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0081_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0081_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0081_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0081_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0081_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0081_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 57.898, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 243356, + "min": 9.6437, + "max": 93.4773, + "mean": 40.1795, + "median": 37.2472, + "p90": 64.6414 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 29, + "major_roads": 4717, + "schools_waterpoints": 74, + "urban_landuse": 3049, + "water_surface": 11, + "waterways": 42 + }, + "label_counts": { + "vector_label": 23, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0082_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0082_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..f5046a513adfb5c4542a6175b39b8e6101eeda54 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0082_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0082_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.55540752624167, + "lat": 13.855868261082552 + }, + "bbox": [ + 100.53225064941117, + 13.833385220934584, + 100.57856440307216, + 13.87835130123052 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0082_label_positive_jitter_packet.png", + "sha256": "7366336787f413a6b31e9f7fdce001d8a5776fabaa86d8a224823bdeff166a71", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0082_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0082_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0082_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0082_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0082_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0082_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0082_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 55.6304, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261954, + "min": 24.2476, + "max": 90.7188, + "mean": 57.1615, + "median": 58.5883, + "p90": 72.688 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 16, + "major_roads": 4380, + "schools_waterpoints": 35, + "urban_landuse": 2230, + "water_surface": 119, + "waterways": 70 + }, + "label_counts": { + "vector_label": 17, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0083_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0083_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..963e6af92bbb636bc5be70c8fa05fec49a92862a --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0083_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0083_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.75156184475762, + "lat": 13.727430380261655 + }, + "bbox": [ + 100.7284177067087, + 13.704947340113687, + 100.77470598280654, + 13.749913420409623 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0083_label_positive_jitter_packet.png", + "sha256": "005bc55b9b0917196beb518242fb2a019528033d7261527ece88c58802bbdcec", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0083_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0083_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0083_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0083_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0083_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0083_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0083_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 63.2551, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261422, + "min": 1.5622, + "max": 50.5132, + "mean": 19.0751, + "median": 19.936, + "p90": 31.5682 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 2, + "major_roads": 2879, + "schools_waterpoints": 8, + "urban_landuse": 1072, + "water_surface": 108, + "waterways": 91 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0084_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0084_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..0eabe5d1e97124832ed51d48a058623908a99b12 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0084_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0084_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.51328129245637, + "lat": 13.736571172827976 + }, + "bbox": [ + 100.49013625210817, + 13.714088132680008, + 100.53642633280457, + 13.759054212975943 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0084_label_positive_jitter_packet.png", + "sha256": "73aa0a94d792b93d2809266ec651f27b2729fed3eb6690304333388ca5d5e0a4", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0084_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0084_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0084_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0084_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0084_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0084_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0084_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 58.2866, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 249477, + "min": 38.4061, + "max": 162.604, + "mean": 96.0256, + "median": 91.003, + "p90": 126.6841 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 174, + "major_roads": 7070, + "schools_waterpoints": 218, + "urban_landuse": 25073, + "water_surface": 113, + "waterways": 197 + }, + "label_counts": { + "vector_label": 23, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0085_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0085_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..bec6cae4d2a114f0cde506c00bfae313aadd43e2 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0085_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0085_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.47677190002901, + "lat": 13.735816176767809 + }, + "bbox": [ + 100.45362693423242, + 13.713333136619841, + 100.4999168658256, + 13.758299216915777 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0085_label_positive_jitter_packet.png", + "sha256": "713e6d6ebc7a1549ba3f00371b94b65de613e006a039be208f3c7845765598e0", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0085_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0085_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0085_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0085_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0085_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0085_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0085_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 56.3136, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 253441, + "min": 22.6532, + "max": 157.1859, + "mean": 97.4282, + "median": 99.5372, + "p90": 133.9727 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 22, + "major_roads": 5833, + "schools_waterpoints": 90, + "urban_landuse": 8799, + "water_surface": 40, + "waterways": 178 + }, + "label_counts": { + "vector_label": 6, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0086_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0086_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..bea20ca5bb04a9d62f0e91cd5a42b89e7a3b6038 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0086_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0086_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.58248835415466, + "lat": 13.874091102557724 + }, + "bbox": [ + 100.55932965937323, + 13.851608062409756, + 100.60564704893609, + 13.896574142705692 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0086_label_positive_jitter_packet.png", + "sha256": "406d41cf59a1a80dfc3582cc4a546e1f57585ad3b4aea3a61f7d75b144f1af2d", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0086_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0086_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0086_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0086_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0086_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0086_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0086_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 61.7248, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261682, + "min": 15.1582, + "max": 92.8242, + "mean": 52.0247, + "median": 52.2745, + "p90": 72.4892 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 11, + "major_roads": 4051, + "schools_waterpoints": 19, + "urban_landuse": 3174, + "water_surface": 92, + "waterways": 63 + }, + "label_counts": { + "vector_label": 18, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0088_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0088_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..f7fbe1221db0dcbd5513579711ee41bd59e52d8a --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0088_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0088_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.52340382613016, + "lat": 13.730343829539438 + }, + "bbox": [ + 100.50025940056256, + 13.70786078939147, + 100.54654825169777, + 13.752826869687405 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0088_label_positive_jitter_packet.png", + "sha256": "cde65c8f3c99de8d7e2ba470870dec4a79952a39432829abf505b10247ad5ce4", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0088_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0088_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0088_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0088_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0088_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0088_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0088_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 59.0835, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 249496, + "min": 27.955, + "max": 162.6028, + "mean": 92.6345, + "median": 87.8371, + "p90": 132.4483 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 187, + "major_roads": 7315, + "schools_waterpoints": 206, + "urban_landuse": 25775, + "water_surface": 148, + "waterways": 169 + }, + "label_counts": { + "vector_label": 25, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0089_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0089_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..a41b404e7193a7cf69fbe7d093e59353a327a7ad --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0089_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0089_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.52297153416015, + "lat": 13.717683540671151 + }, + "bbox": [ + 100.4998283575078, + 13.695200500523184, + 100.5461147108125, + 13.74016658081912 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0089_label_positive_jitter_packet.png", + "sha256": "50225d74cb98e5d114ddb4217ccd0935049a2651f55067dc3a2942657857f3f4", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0089_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0089_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0089_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0089_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0089_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0089_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0089_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 58.0061, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 248361, + "min": 27.4315, + "max": 162.5914, + "mean": 103.0244, + "median": 107.06, + "p90": 134.7551 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 168, + "major_roads": 7251, + "schools_waterpoints": 162, + "urban_landuse": 28239, + "water_surface": 111, + "waterways": 162 + }, + "label_counts": { + "vector_label": 16, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0090_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0090_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..3ac0b3ef3aa9a1191ca0e926c0774ef89c7617c7 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0090_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0090_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.48863423154187, + "lat": 13.764116115011385 + }, + "bbox": [ + 100.46548646820885, + 13.741633074863417, + 100.51178199487488, + 13.786599155159353 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0090_label_positive_jitter_packet.png", + "sha256": "1995cfe1231f76c5f6a06b1865868946fdfaeaf398b50dcd8899cfb9f7ae620e", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0090_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0090_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0090_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0090_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0090_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0090_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0090_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 56.0176, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 241674, + "min": 27.2258, + "max": 162.6206, + "mean": 98.9283, + "median": 98.1346, + "p90": 137.6526 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 59, + "major_roads": 5410, + "schools_waterpoints": 150, + "urban_landuse": 12352, + "water_surface": 59, + "waterways": 170 + }, + "label_counts": { + "vector_label": 13, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0091_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0091_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..dc13b327574fd6a2e5c1783c78f28bcd350fb24a --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0091_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0091_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.5320711710269, + "lat": 13.777911381556226 + }, + "bbox": [ + 100.50892204169628, + 13.755428341408258, + 100.55522030035752, + 13.800394421704194 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0091_label_positive_jitter_packet.png", + "sha256": "8fb0fd3c74ce8aaa74d1084c1df1969b46331ba1e3bda45a29bea87cfde7cd1f", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0091_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0091_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0091_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0091_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0091_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0091_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0091_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 57.5985, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 257731, + "min": 24.6449, + "max": 137.0225, + "mean": 84.748, + "median": 87.8612, + "p90": 111.764 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 71, + "major_roads": 6441, + "schools_waterpoints": 84, + "urban_landuse": 10269, + "water_surface": 241, + "waterways": 90 + }, + "label_counts": { + "vector_label": 9, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0093_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0093_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..b5bb2e9f3ed9a3818436e146198c0d5181dda4c5 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0093_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0093_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.54916568856443, + "lat": 13.724318023382843 + }, + "bbox": [ + 100.52602185758974, + 13.701834983234875, + 100.57230951953912, + 13.74680106353081 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0093_label_positive_jitter_packet.png", + "sha256": "61d0b7e966b305d063d295cbba76fdd2fcc7a4da3e657a732948be56281c2193", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0093_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0093_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0093_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0093_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0093_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0093_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0093_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 60.3263, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 250050, + "min": 12.315, + "max": 162.5887, + "mean": 89.2539, + "median": 88.7206, + "p90": 127.8566 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 196, + "major_roads": 7070, + "schools_waterpoints": 192, + "urban_landuse": 23316, + "water_surface": 146, + "waterways": 118 + }, + "label_counts": { + "vector_label": 7, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0094_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0094_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..d5f4e3045a5775cd2dc320fbaf8c52e11c58cf11 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0094_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0094_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.47237653691367, + "lat": 13.771324811521948 + }, + "bbox": [ + 100.4492280599681, + 13.74884177137398, + 100.49552501385924, + 13.793807851669916 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0094_label_positive_jitter_packet.png", + "sha256": "99ecf78ef83673249bf6c063037e472ba0bcdbcf30f68644f224e78fb3307c25", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0094_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0094_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0094_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0094_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0094_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0094_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0094_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 56.6447, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 252611, + "min": 17.326, + "max": 162.7061, + "mean": 83.3131, + "median": 82.548, + "p90": 137.0995 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 19, + "major_roads": 4759, + "schools_waterpoints": 43, + "urban_landuse": 4272, + "water_surface": 23, + "waterways": 160 + }, + "label_counts": { + "vector_label": 6, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0096_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0096_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..ee349d38bc45135330658271c517d3f1b9b64c00 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0096_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0096_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.64974462012763, + "lat": 13.764295241955415 + }, + "bbox": [ + 100.62659683906723, + 13.741812201807447, + 100.67289240118804, + 13.786778282103382 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0096_label_positive_jitter_packet.png", + "sha256": "cd911c82faddfd0996422af3d0d82df464e60b9a26f909ac42295f7263501293", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0096_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0096_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0096_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0096_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0096_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0096_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0096_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 59.4417, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261802, + "min": 15.4147, + "max": 136.8736, + "mean": 71.7249, + "median": 71.9509, + "p90": 112.1523 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 12, + "major_roads": 3944, + "schools_waterpoints": 30, + "urban_landuse": 4889, + "water_surface": 83, + "waterways": 83 + }, + "label_counts": { + "vector_label": 4, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0097_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0097_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..75bb5541a8f19786e29f3ed1d5e84ad0916a648b --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0097_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0097_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.49506224779907, + "lat": 13.842273036218982 + }, + "bbox": [ + 100.47190672554684, + 13.819789996071014, + 100.5182177700513, + 13.86475607636695 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0097_label_positive_jitter_packet.png", + "sha256": "faf5688a50280ac6e4a60c9467f3814694f0ba56f4d94d6ba79140a983543ae4", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0097_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0097_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0097_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0097_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0097_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0097_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0097_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 57.2014, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 245139, + "min": 9.8882, + "max": 93.4931, + "mean": 42.7466, + "median": 41.2355, + "p90": 64.821 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 30, + "major_roads": 4795, + "schools_waterpoints": 70, + "urban_landuse": 2887, + "water_surface": 14, + "waterways": 38 + }, + "label_counts": { + "vector_label": 23, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0098_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0098_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..1a2df6341911871cd87edb0ab6181d47f6d36586 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0098_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0098_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.69775211439325, + "lat": 13.718193483807175 + }, + "bbox": [ + 100.67460888746035, + 13.695710443659207, + 100.72089534132616, + 13.740676523955143 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0098_label_positive_jitter_packet.png", + "sha256": "fe65e508112e5465795fea557fd7e5d96f931f8a3c02e9d0d1da297ca47d11f8", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0098_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0098_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0098_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0098_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0098_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0098_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0098_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 64.0947, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 258966, + "min": 3.2265, + "max": 54.2065, + "mean": 21.5297, + "median": 20.9983, + "p90": 32.0367 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 4, + "major_roads": 3689, + "schools_waterpoints": 2, + "urban_landuse": 1084, + "water_surface": 131, + "waterways": 26 + }, + "label_counts": { + "vector_label": 2, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0100_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0100_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..8b53df2b7ac303ae1e8720b998d111fb31a14332 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0100_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0100_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.55763486278082, + "lat": 13.853371142019983 + }, + "bbox": [ + 100.53447823486371, + 13.830888101872015, + 100.58079149069792, + 13.87585418216795 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0100_label_positive_jitter_packet.png", + "sha256": "e5f5889b0596b144a85bc3cf1f61e8e1d9870f1e8175667e1b48e96c259703a2", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0100_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0100_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0100_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0100_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0100_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0100_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0100_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 56.212, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 262144, + "min": 24.2606, + "max": 91.7051, + "mean": 58.2545, + "median": 59.345, + "p90": 74.0679 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 18, + "major_roads": 4439, + "schools_waterpoints": 36, + "urban_landuse": 2380, + "water_surface": 121, + "waterways": 64 + }, + "label_counts": { + "vector_label": 20, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0101_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0101_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..c027c74bb991e3cbc03a653dcaee195dfdfbb24a --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0101_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0101_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.51703062904993, + "lat": 13.744634636855707 + }, + "bbox": [ + 100.49388479219944, + 13.72215159670774, + 100.54017646590042, + 13.767117677003675 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0101_label_positive_jitter_packet.png", + "sha256": "0df66b69c7072a6aed32d1445a1209cb9d1ea26a199183c033f7e15e1dcc2ed0", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0101_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0101_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0101_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0101_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0101_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0101_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0101_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 59.3976, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 252946, + "min": 24.46, + "max": 158.1066, + "mean": 88.0704, + "median": 86.9195, + "p90": 116.772 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 207, + "major_roads": 7263, + "schools_waterpoints": 226, + "urban_landuse": 25194, + "water_surface": 144, + "waterways": 168 + }, + "label_counts": { + "vector_label": 25, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0103_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0103_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..ffcb21484fab05f4ad1998036c12c5d7aa3f2c3d --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0103_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0103_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.49986768086187, + "lat": 13.769894608019612 + }, + "bbox": [ + 100.47671934552949, + 13.747411567871644, + 100.52301601619425, + 13.79237764816758 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0103_label_positive_jitter_packet.png", + "sha256": "8cc160ea6abc2a000c6275eab563c9851e39bc32ecff7fca621a33702063359f", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0103_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0103_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0103_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0103_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0103_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0103_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0103_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 57.5416, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 243084, + "min": 22.4581, + "max": 162.6821, + "mean": 92.1756, + "median": 89.7744, + "p90": 140.2244 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 63, + "major_roads": 5357, + "schools_waterpoints": 141, + "urban_landuse": 13101, + "water_surface": 95, + "waterways": 157 + }, + "label_counts": { + "vector_label": 18, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0104_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0104_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..039e5f8a75e30fc870b01f9bcfa13600a23eb2e9 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0104_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0104_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.39626865542789, + "lat": 13.703795256038008 + }, + "bbox": [ + 100.37312684737589, + 13.68131221589004, + 100.41941046347989, + 13.726278296185976 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0104_label_positive_jitter_packet.png", + "sha256": "4706f5949c67a68bba843d5506c367c3e235babde2bd40d3a816f564d2fc9514", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0104_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0104_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0104_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0104_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0104_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0104_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0104_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 59.4579, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261802, + "min": 17.7288, + "max": 83.6833, + "mean": 43.3693, + "median": 40.3826, + "p90": 63.3311 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 22, + "major_roads": 4135, + "schools_waterpoints": 21, + "urban_landuse": 469, + "water_surface": 26, + "waterways": 82 + }, + "label_counts": { + "vector_label": 5, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0105_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0105_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..e9fabb46efd86dbd89c189f6b4482011b0be3d12 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0105_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0105_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.49261181312558, + "lat": 13.76632428125976 + }, + "bbox": [ + 100.46946383124254, + 13.743841241111792, + 100.51575979500862, + 13.788807321407727 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0105_label_positive_jitter_packet.png", + "sha256": "2e1f627e248a04914e345ddf5b3a8cb2fa141b534e99e1fae3a6c19875ce4143", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0105_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0105_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0105_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0105_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0105_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0105_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0105_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 56.5327, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 242092, + "min": 24.8752, + "max": 162.6339, + "mean": 98.0219, + "median": 97.8327, + "p90": 139.8698 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 67, + "major_roads": 5461, + "schools_waterpoints": 153, + "urban_landuse": 12644, + "water_surface": 74, + "waterways": 163 + }, + "label_counts": { + "vector_label": 14, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0106_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0106_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..fd41b3602a65174c8561faac6343fca46472d945 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0106_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0106_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.53708122382244, + "lat": 13.72125789510725 + }, + "bbox": [ + 100.51393769469443, + 13.698774854959282, + 100.56022475295045, + 13.743740935255218 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0106_label_positive_jitter_packet.png", + "sha256": "9a8cf1c06acca670ef58a76b910830960920bd4d0621b9243205dadbf18a81f2", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0106_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0106_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0106_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0106_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0106_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0106_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0106_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 59.9917, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 254849, + "min": 11.0299, + "max": 162.6012, + "mean": 94.3034, + "median": 90.6272, + "p90": 134.9467 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 196, + "major_roads": 7798, + "schools_waterpoints": 198, + "urban_landuse": 31243, + "water_surface": 148, + "waterways": 142 + }, + "label_counts": { + "vector_label": 14, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0107_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0107_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..d70cdc48fccaca523981488f082f965a6986fffa --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0107_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0107_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.51779261053171, + "lat": 13.714189331360485 + }, + "bbox": [ + 100.49464977835429, + 13.691706291212517, + 100.54093544270914, + 13.736672371508453 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0107_label_positive_jitter_packet.png", + "sha256": "1a8dfdc7dd008eb59dce2f103af0f8ad50f4657bc90959e353ddbd097809950d", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0107_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0107_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0107_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0107_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0107_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0107_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0107_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 56.3377, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 246733, + "min": 28.1827, + "max": 162.6106, + "mean": 108.5436, + "median": 111.3961, + "p90": 134.8713 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 137, + "major_roads": 7077, + "schools_waterpoints": 140, + "urban_landuse": 26729, + "water_surface": 49, + "waterways": 175 + }, + "label_counts": { + "vector_label": 11, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0108_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0108_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..84b9d7de27c2032d5676309c101edce4701a9e93 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0108_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0108_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.48619641366469, + "lat": 13.616099692890378 + }, + "bbox": [ + 100.46306321232535, + 13.59361665274241, + 100.50932961500402, + 13.638582733038346 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0108_label_positive_jitter_packet.png", + "sha256": "a1b19b5f750e02cdd8c6816dbe44163e7f406a8dc806104558bc595fd59ff6b0", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0108_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0108_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0108_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0108_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0108_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0108_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0108_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 58.3327, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 234711, + "min": 1.9456, + "max": 66.0174, + "mean": 16.2411, + "median": 13.3723, + "p90": 32.3973 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 2405, + "schools_waterpoints": 9, + "urban_landuse": 2981, + "water_surface": 850, + "waterways": 331 + }, + "label_counts": { + "vector_label": 3, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0111_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0111_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..860e5b315390d6da107b5aa10b7f1a14c63e9ce9 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0111_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0111_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.40631800272416, + "lat": 13.712419253326127 + }, + "bbox": [ + 100.38317534501225, + 13.689936213178159, + 100.42946066043608, + 13.734902293474095 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0111_label_positive_jitter_packet.png", + "sha256": "ddb0b2fa890cafac905cc3cf7bedba7c2bb2d77de3f2cbe825e34eb46d41dda6", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0111_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0111_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0111_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0111_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0111_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0111_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0111_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 60.0943, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261441, + "min": 18.2823, + "max": 113.1412, + "mean": 46.2741, + "median": 42.2059, + "p90": 69.2578 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 17, + "major_roads": 4372, + "schools_waterpoints": 17, + "urban_landuse": 615, + "water_surface": 19, + "waterways": 151 + }, + "label_counts": { + "vector_label": 6, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0112_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0112_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..d4192d0556c071ce8bcd9b83e46d1dfef31afbab --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0112_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0112_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.4680442849699, + "lat": 13.710991185911583 + }, + "bbox": [ + 100.44490176799565, + 13.688508145763615, + 100.49118680194417, + 13.73347422605955 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0112_label_positive_jitter_packet.png", + "sha256": "1eb524eb278df2ba45b467f25852244d642f964e4302d2c8844e0bf2eb3c75a3", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0112_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0112_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0112_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0112_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0112_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0112_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0112_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 57.4381, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 256999, + "min": 16.6578, + "max": 158.2228, + "mean": 81.9371, + "median": 76.3803, + "p90": 137.2494 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 12, + "major_roads": 5283, + "schools_waterpoints": 37, + "urban_landuse": 2628, + "water_surface": 7, + "waterways": 186 + }, + "label_counts": { + "vector_label": 11, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0113_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0113_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..3fca139de32dc6399909d28f0905bf5b515a5dbe --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0113_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0113_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.49494354387403, + "lat": 13.62697456743578 + }, + "bbox": [ + 100.47180927853209, + 13.604491527287813, + 100.51807780921597, + 13.649457607583749 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0113_label_positive_jitter_packet.png", + "sha256": "c4630dcfa455122739a715bae71527ea431af2a6a94b7da56ede375c810c99cc", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0113_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0113_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0113_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0113_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0113_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0113_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0113_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 60.7422, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 251253, + "min": 3.3493, + "max": 66.0976, + "mean": 26.9263, + "median": 24.7545, + "p90": 48.6196 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 3518, + "schools_waterpoints": 9, + "urban_landuse": 2580, + "water_surface": 416, + "waterways": 164 + }, + "label_counts": { + "vector_label": 3, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0114_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0114_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..45de6102c4187b4221cc787a478b62c100e525d8 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0114_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0114_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.59114647693688, + "lat": 13.707222173669788 + }, + "bbox": [ + 100.56800433132578, + 13.68473913352182, + 100.61428862254799, + 13.729705213817756 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0114_label_positive_jitter_packet.png", + "sha256": "d35d4e01238edd6d869b6771563fd0f535f78c5e9e65645ed52ec44fc2501a5b", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0114_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0114_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0114_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0114_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0114_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0114_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0114_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 59.2384, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 246181, + "min": 8.1513, + "max": 110.4379, + "mean": 71.1182, + "median": 78.0861, + "p90": 94.7254 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 54, + "major_roads": 3768, + "schools_waterpoints": 51, + "urban_landuse": 4089, + "water_surface": 16, + "waterways": 88 + }, + "label_counts": { + "vector_label": 7, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0115_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0115_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..44a299bbebbc7324ade4f97f12db102a7e36518d --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0115_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0115_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.41760496544003, + "lat": 13.649902272642258 + }, + "bbox": [ + 100.39446845378912, + 13.62741923249429, + 100.44074147709095, + 13.672385312790226 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0115_label_positive_jitter_packet.png", + "sha256": "a203df0a0fa9e9301c686737499535c928712d8cf1739b7f4953acc6b2b7f84e", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0115_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0115_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0115_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0115_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0115_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0115_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0115_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 62.9077, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 260738, + "min": 14.3587, + "max": 73.7432, + "mean": 37.1001, + "median": 35.3032, + "p90": 53.1246 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 18, + "major_roads": 4245, + "schools_waterpoints": 9, + "urban_landuse": 552, + "water_surface": 25, + "waterways": 32 + }, + "label_counts": { + "vector_label": 3, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0116_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0116_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..10617a66df932dc0441549a9f90d89acf0d34c68 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0116_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0116_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.52082546835473, + "lat": 13.748418589035786 + }, + "bbox": [ + 100.49767925755164, + 13.725935548887819, + 100.54397167915782, + 13.770901629183754 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0116_label_positive_jitter_packet.png", + "sha256": "2728a818bdc79f2ab9eab9b05f5614896b739c12da5f0499009cbecf2e18238e", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0116_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0116_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0116_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0116_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0116_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0116_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0116_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 58.7165, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 255285, + "min": 24.4827, + "max": 144.2804, + "mean": 84.3854, + "median": 85.1527, + "p90": 113.8804 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 207, + "major_roads": 7179, + "schools_waterpoints": 214, + "urban_landuse": 23293, + "water_surface": 148, + "waterways": 135 + }, + "label_counts": { + "vector_label": 29, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0118_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0118_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..8964855cb94ad60b417e500c721471df5920c429 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0118_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0118_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.4753804652798, + "lat": 13.71884928367836 + }, + "bbox": [ + 100.45223717368182, + 13.696366243530392, + 100.49852375687777, + 13.741332323826327 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0118_label_positive_jitter_packet.png", + "sha256": "bc72833df635c65530b4081d19aac523ac8fefc92cf52e1d19602da7f6bf7444", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0118_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0118_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0118_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0118_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0118_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0118_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0118_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 56.0531, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 253618, + "min": 24.0582, + "max": 158.1536, + "mean": 93.9387, + "median": 92.8465, + "p90": 138.0535 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 11, + "major_roads": 5839, + "schools_waterpoints": 62, + "urban_landuse": 4022, + "water_surface": 16, + "waterways": 169 + }, + "label_counts": { + "vector_label": 9, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0119_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0119_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..113a99a0f14ddc6cd1628d09fa5930561b826aec --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0119_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0119_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.55589366569215, + "lat": 13.899541783937847 + }, + "bbox": [ + 100.5327324274953, + 13.87705874378988, + 100.579054903889, + 13.922024824085815 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0119_label_positive_jitter_packet.png", + "sha256": "1955582ad10c22da5ac679ee2bb991e7b4b9adea546b7159a1bc96d42d502e8e", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0119_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0119_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0119_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0119_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0119_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0119_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0119_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 62.3093, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 259165, + "min": 11.9898, + "max": 83.4494, + "mean": 39.7104, + "median": 38.048, + "p90": 61.9823 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 29, + "major_roads": 4332, + "schools_waterpoints": 24, + "urban_landuse": 1062, + "water_surface": 138, + "waterways": 93 + }, + "label_counts": { + "vector_label": 2, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0121_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0121_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..8705edddaee73a138da7bdac9dcb248e31c5912a --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0121_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0121_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.55007933358554, + "lat": 13.750347367336499 + }, + "bbox": [ + 100.52693293212565, + 13.72786432718853, + 100.57322573504544, + 13.772830407484467 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0121_label_positive_jitter_packet.png", + "sha256": "052e924a91f5b52f10973c86545a48233d3c8e360b0c3e7fb56909bc25d6cb12", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0121_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0121_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0121_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0121_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0121_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0121_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0121_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 58.4294, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 260282, + "min": 27.6205, + "max": 143.2089, + "mean": 88.0764, + "median": 88.421, + "p90": 117.9258 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 194, + "major_roads": 7168, + "schools_waterpoints": 171, + "urban_landuse": 16390, + "water_surface": 157, + "waterways": 103 + }, + "label_counts": { + "vector_label": 10, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0122_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0122_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..a721eb53b19f2edb0759b09a88514c7ebd690e37 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0122_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0122_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.57493007645876, + "lat": 13.80081538237496 + }, + "bbox": [ + 100.55177867586978, + 13.778332342226992, + 100.59808147704773, + 13.823298422522928 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0122_label_positive_jitter_packet.png", + "sha256": "24bc9f9b1d1db852e62f9cb6cdefcde9f02b4ad0050e8bfebc2c06c87abe8904", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0122_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0122_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0122_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0122_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0122_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0122_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0122_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 56.2831, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 262144, + "min": 27.2906, + "max": 144.1543, + "mean": 85.438, + "median": 85.2748, + "p90": 119.0517 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 37, + "major_roads": 5289, + "schools_waterpoints": 35, + "urban_landuse": 4432, + "water_surface": 79, + "waterways": 71 + }, + "label_counts": { + "vector_label": 9, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0123_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0123_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..8decae30a7f52c2dc181e7bf06f062ab168c34ad --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0123_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0123_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.57742334372108, + "lat": 13.8720941248496 + }, + "bbox": [ + 100.55426484829079, + 13.849611084701632, + 100.60058183915137, + 13.894577164997568 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0123_label_positive_jitter_packet.png", + "sha256": "86aaa3da5ff16117f8f5b1b93e2bf92227a495e0192dbf018865fcf322ef0628", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0123_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0123_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0123_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0123_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0123_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0123_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0123_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 61.8418, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 260890, + "min": 15.1104, + "max": 92.8743, + "mean": 51.7538, + "median": 51.4822, + "p90": 70.8179 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 12, + "major_roads": 4090, + "schools_waterpoints": 26, + "urban_landuse": 2694, + "water_surface": 167, + "waterways": 77 + }, + "label_counts": { + "vector_label": 19, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0124_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0124_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..79632386b462e1c6b485cfd4aaa8501895505ac8 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0124_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0124_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.49895385693047, + "lat": 13.630109887866743 + }, + "bbox": [ + 100.47581928465442, + 13.607626847718775, + 100.52208842920652, + 13.65259292801471 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0124_label_positive_jitter_packet.png", + "sha256": "0118952504815dca8815fc80a2eebb6f984df94e249c12b1f59a7a7b79bcc7d1", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0124_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0124_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0124_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0124_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0124_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0124_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0124_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 60.6685, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 252101, + "min": 3.7041, + "max": 72.9126, + "mean": 31.0172, + "median": 29.4432, + "p90": 52.266 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 3891, + "schools_waterpoints": 7, + "urban_landuse": 2442, + "water_surface": 320, + "waterways": 146 + }, + "label_counts": { + "vector_label": 3, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0125_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0125_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..37c72129663867db22f76e7185f55d86d9738d82 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0125_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0125_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.48999772758529, + "lat": 13.840635578040326 + }, + "bbox": [ + 100.46684236838473, + 13.818152537892358, + 100.51315308678585, + 13.863118618188293 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0125_label_positive_jitter_packet.png", + "sha256": "d3e449d92675c01e91ee4b719403d84fc025a2c90cce7fa72dd4c2dc374eb411", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0125_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0125_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0125_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0125_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0125_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0125_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0125_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 57.8125, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 244552, + "min": 8.8552, + "max": 91.9827, + "mean": 38.3895, + "median": 35.3398, + "p90": 63.2859 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 29, + "major_roads": 4676, + "schools_waterpoints": 69, + "urban_landuse": 3754, + "water_surface": 6, + "waterways": 41 + }, + "label_counts": { + "vector_label": 23, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0127_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0127_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..366193d1b7164d22ba948ca2c1177639f335c4a7 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0127_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0127_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.49483720606726, + "lat": 13.876681097444653 + }, + "bbox": [ + 100.4716782526889, + 13.854198057296685, + 100.51799615944562, + 13.89916413759262 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0127_label_positive_jitter_packet.png", + "sha256": "22a61db78d51623551347553878ab018f7a6d282863fae05b068c4a39df7c6d1", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0127_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0127_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0127_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0127_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0127_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0127_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0127_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 59.0021, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 245599, + "min": 6.5932, + "max": 79.2032, + "mean": 38.973, + "median": 39.0067, + "p90": 60.8426 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 10, + "major_roads": 4127, + "schools_waterpoints": 12, + "urban_landuse": 2252, + "water_surface": 28, + "waterways": 27 + }, + "label_counts": { + "vector_label": 5, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0128_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0128_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..1257540ccc7a22b4b49838bb98c412d562b080d8 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0128_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0128_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.51946448064089, + "lat": 13.755082769203778 + }, + "bbox": [ + 100.49631761096911, + 13.73259972905581, + 100.54261135031267, + 13.777565809351746 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0128_label_positive_jitter_packet.png", + "sha256": "1bbf99568bacf4da6b647402c75cc099979a808f2c2758d81863c9846ab87920", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0128_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0128_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0128_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0128_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0128_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0128_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0128_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 59.0165, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 253280, + "min": 24.507, + "max": 127.8087, + "mean": 81.5892, + "median": 82.4891, + "p90": 111.9176 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 152, + "major_roads": 6489, + "schools_waterpoints": 216, + "urban_landuse": 21387, + "water_surface": 197, + "waterways": 125 + }, + "label_counts": { + "vector_label": 24, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0129_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0129_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..d250e8881e781fe37b90545916cdd80a429bed7c --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0129_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0129_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.51404677679396, + "lat": 13.872274594420693 + }, + "bbox": [ + 100.49088826334933, + 13.849791554272725, + 100.53720529023859, + 13.894757634568661 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0129_label_positive_jitter_packet.png", + "sha256": "a9cc5f9319e9b5abee28ee92a27813495f4c853c6229b4ec59d8f9787a549f03", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0129_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0129_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0129_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0129_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0129_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0129_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0129_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 58.0993, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261035, + "min": 14.437, + "max": 81.7054, + "mean": 48.1193, + "median": 48.5337, + "p90": 66.8391 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 18, + "major_roads": 4656, + "schools_waterpoints": 15, + "urban_landuse": 746, + "water_surface": 29, + "waterways": 41 + }, + "label_counts": { + "vector_label": 5, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0130_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0130_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..a4ff7552934f2f5a2c19a9d8266d3cecbfd71b4e --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0130_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0130_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.48550642559773, + "lat": 13.714320945615995 + }, + "bbox": [ + 100.46236358044692, + 13.691837905468027, + 100.50864927074855, + 13.736803985763963 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0130_label_positive_jitter_packet.png", + "sha256": "54004c9c95adf165feca34e8e1cb8aa75ab850dbe240edad14d28e5592cbc3bd", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0130_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0130_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0130_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0130_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0130_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0130_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0130_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 55.2522, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 247572, + "min": 31.3955, + "max": 158.1483, + "mean": 101.3074, + "median": 103.5437, + "p90": 138.3875 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 11, + "major_roads": 5684, + "schools_waterpoints": 49, + "urban_landuse": 4204, + "water_surface": 11, + "waterways": 188 + }, + "label_counts": { + "vector_label": 9, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0131_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0131_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..a2884c4c4b120216169af099ecd19995cfe2ae2c --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0131_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0131_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.5304249277839, + "lat": 13.737906394945647 + }, + "bbox": [ + 100.50727975557902, + 13.715423354797679, + 100.55357009998878, + 13.760389435093614 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0131_label_positive_jitter_packet.png", + "sha256": "294b3ea1332a82be8f9f1b5f052e4a6d7efc741ba049b730b720c68c3ad9997e", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0131_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0131_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0131_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0131_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0131_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0131_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0131_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 59.4489, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 254384, + "min": 27.8858, + "max": 162.5024, + "mean": 90.4826, + "median": 87.7264, + "p90": 124.8369 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 230, + "major_roads": 7794, + "schools_waterpoints": 207, + "urban_landuse": 24427, + "water_surface": 162, + "waterways": 153 + }, + "label_counts": { + "vector_label": 26, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0132_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0132_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..901508d61d7cdfb75377edfb8d7899436acada27 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0132_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0132_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.62528108005549, + "lat": 13.780386612726497 + }, + "bbox": [ + 100.60213170547016, + 13.75790357257853, + 100.64843045464082, + 13.802869652874465 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0132_label_positive_jitter_packet.png", + "sha256": "acd052f018f93668b18040ec8affc314bc5ee3078bd8edfb3ca787bae73e8839", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0132_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0132_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0132_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0132_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0132_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0132_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0132_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 56.8478, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261612, + "min": 22.1332, + "max": 136.6308, + "mean": 85.4397, + "median": 86.776, + "p90": 113.3024 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 17, + "major_roads": 4315, + "schools_waterpoints": 14, + "urban_landuse": 2152, + "water_surface": 10, + "waterways": 50 + }, + "label_counts": { + "vector_label": 3, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0133_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0133_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..f2727f1d74b4c3efbf48d2e5c6b49964a5891b45 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0133_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0133_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.59085462372353, + "lat": 13.757462286236777 + }, + "bbox": [ + 100.56770751871068, + 13.734979246088809, + 100.61400172873638, + 13.779945326384745 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0133_label_positive_jitter_packet.png", + "sha256": "1c95608423d86aac9dd96b4c7e10368fd03beabb02bf5e4a35fecf0633e96689", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0133_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0133_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0133_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0133_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0133_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0133_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0133_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 59.5221, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 262144, + "min": 25.6462, + "max": 138.668, + "mean": 71.7387, + "median": 72.3682, + "p90": 97.0558 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 38, + "major_roads": 4690, + "schools_waterpoints": 32, + "urban_landuse": 5724, + "water_surface": 34, + "waterways": 89 + }, + "label_counts": { + "vector_label": 5, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0135_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0135_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..c96133e8a99dee3d1d664cb0f513a3b0814516b7 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0135_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0135_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.49738691917699, + "lat": 13.829533143310192 + }, + "bbox": [ + 100.47423266495396, + 13.807050103162224, + 100.52054117340002, + 13.85201618345816 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0135_label_positive_jitter_packet.png", + "sha256": "51b4d2e7215fb358ecda1a02913c1e2f0f10cd62c4d425e332c298c5cfc2317c", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0135_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0135_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0135_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0135_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0135_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0135_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0135_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 57.792, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 240894, + "min": 9.6438, + "max": 113.2058, + "mean": 40.1861, + "median": 36.9917, + "p90": 65.2272 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 27, + "major_roads": 5039, + "schools_waterpoints": 72, + "urban_landuse": 3345, + "water_surface": 19, + "waterways": 58 + }, + "label_counts": { + "vector_label": 22, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0136_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0136_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..01f1df9e9578f1342b8dbeb9c2469c0e6c5b46b6 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0136_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0136_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.4362628914707, + "lat": 13.708210632360965 + }, + "bbox": [ + 100.41312064847699, + 13.685727592212997, + 100.45940513446442, + 13.730693672508933 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0136_label_positive_jitter_packet.png", + "sha256": "3daecbc8f0892ea0ae2a252eedde9dcbe7c8a2b3a99281342be177eb444640b2", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0136_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0136_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0136_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0136_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0136_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0136_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0136_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 60.27, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261593, + "min": 16.7957, + "max": 113.3246, + "mean": 55.2544, + "median": 51.5243, + "p90": 86.311 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 18, + "major_roads": 4426, + "schools_waterpoints": 19, + "urban_landuse": 1575, + "water_surface": 2, + "waterways": 201 + }, + "label_counts": { + "vector_label": 6, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0137_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0137_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..c2c379a99afd4ee79c3b1805dddb5f600c5b31d0 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0137_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0137_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.65042397066254, + "lat": 13.795524252070962 + }, + "bbox": [ + 100.6272730951328, + 13.773041211922994, + 100.6735748461923, + 13.81800729221893 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0137_hard_negative_water_urban_packet.png", + "sha256": "00d18d8a408c5ba108f8287ea01e9cd5e31e7eb22719d79203f17e890f9fd9b8", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0137_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0137_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0137_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0137_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0137_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0137_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0137_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 59.2525, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 260695, + "min": 14.4884, + "max": 136.6901, + "mean": 51.1375, + "median": 44.0413, + "p90": 99.3934 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 13, + "major_roads": 3901, + "schools_waterpoints": 21, + "urban_landuse": 7596, + "water_surface": 26, + "waterways": 57 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0139_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0139_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..6ff58b4c5a6acea9d41dc0b803005919b1e18867 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0139_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0139_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.45576259797176, + "lat": 13.790932206608625 + }, + "bbox": [ + 100.43261217794904, + 13.768449166460657, + 100.47891301799447, + 13.813415246756593 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0139_hard_negative_water_urban_packet.png", + "sha256": "7114a8fdef247a66f0b80d0a7c525c9aa6faf662c2627ad20be4e8eee3e353a6", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0139_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0139_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0139_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0139_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0139_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0139_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0139_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 59.6245, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 259010, + "min": 6.0498, + "max": 144.0747, + "mean": 36.3324, + "median": 26.7905, + "p90": 80.7769 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 9, + "major_roads": 4684, + "schools_waterpoints": 19, + "urban_landuse": 1190, + "water_surface": 13, + "waterways": 105 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0140_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0140_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..c9cb7e9cc82a78203dc4d644da172aba8b7841ec --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0140_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0140_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.63936100523237, + "lat": 13.578595788207005 + }, + "bbox": [ + 100.61623146615018, + 13.556112748059038, + 100.66249054431456, + 13.601078828354973 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0140_hard_negative_water_urban_packet.png", + "sha256": "dd58f6f25deda2594a6cdf97017ccd621dcd185a91f3d7bfc529b16dda9f632d", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0140_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0140_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0140_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0140_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0140_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0140_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0140_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 65.5719, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 255188, + "min": 7.04, + "max": 48.9828, + "mean": 18.8478, + "median": 17.2762, + "p90": 28.865 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 3586, + "schools_waterpoints": 9, + "urban_landuse": 14954, + "water_surface": 86, + "waterways": 55 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0143_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0143_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..0d5f13fabbac463c3dafd6fc202b8bc6f3851e3d --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0143_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0143_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.61593405316503, + "lat": 13.647762429521805 + }, + "bbox": [ + 100.59279775133739, + 13.625279389373837, + 100.63907035499268, + 13.670245469669773 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0143_hard_negative_water_urban_packet.png", + "sha256": "5f92e018ebd16891b84ac28b3366b994eec9b2833c9ef82d06ba5e38f51d86e3", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0143_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0143_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0143_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0143_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0143_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0143_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0143_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 60.9237, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 262144, + "min": 8.0251, + "max": 78.8913, + "mean": 44.4092, + "median": 45.3438, + "p90": 62.2818 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 7, + "major_roads": 4125, + "schools_waterpoints": 22, + "urban_landuse": 26749, + "water_surface": 55, + "waterways": 22 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0144_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0144_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..e6ee69e7554a94cd8359bdfb5cedccb3a1523f57 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0144_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0144_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.4602341047276, + "lat": 13.82949468326908 + }, + "bbox": [ + 100.43707985433063, + 13.807011643121113, + 100.48338835512457, + 13.851977723417049 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0144_hard_negative_water_urban_packet.png", + "sha256": "0096cbd396a9c38251cbe84f3550dcb67d05791af7b7f35c9e46c749aa94b0ef", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0144_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0144_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0144_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0144_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0144_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0144_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0144_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 61.1528, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 259418, + "min": 4.8583, + "max": 53.4124, + "mean": 16.1722, + "median": 13.5269, + "p90": 29.0909 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 14, + "major_roads": 4664, + "schools_waterpoints": 51, + "urban_landuse": 4616, + "water_surface": 5, + "waterways": 52 + }, + "label_counts": { + "vector_label": 2, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0145_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0145_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..d1c85eb8d14f2cfa6a1ecbd2c33f3aba60f4efc7 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0145_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0145_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.59442398718517, + "lat": 13.627545262819575 + }, + "bbox": [ + 100.57128966598042, + 13.605062222671608, + 100.61755830838992, + 13.650028302967543 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0145_hard_negative_water_urban_packet.png", + "sha256": "5aaa7a2765086e03d9add7531511a70586a320d09e83b385ee2246b9364240ab", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0145_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0145_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0145_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0145_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0145_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0145_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0145_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 63.297, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 248203, + "min": 9.7006, + "max": 73.1711, + "mean": 42.1699, + "median": 44.7582, + "p90": 57.253 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 3542, + "schools_waterpoints": 14, + "urban_landuse": 32254, + "water_surface": 31, + "waterways": 55 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0146_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0146_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..cfe4d8455ca9dbcb9c505c3ef91de29dfdfe514a --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0146_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0146_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.66649387582972, + "lat": 13.58601935590732 + }, + "bbox": [ + 100.64336361271468, + 13.563536315759352, + 100.68962413894475, + 13.608502396055288 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0146_hard_negative_water_urban_packet.png", + "sha256": "696d057501b60c31dd29626f401edc403e876b791246ce6b6965a8c7458866c7", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0146_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0146_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0146_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0146_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0146_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0146_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0146_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 65.1716, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 254766, + "min": 2.0026, + "max": 41.396, + "mean": 11.553, + "median": 11.269, + "p90": 19.8462 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 8, + "major_roads": 3864, + "schools_waterpoints": 5, + "urban_landuse": 12917, + "water_surface": 44, + "waterways": 36 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0147_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0147_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..473300067ad1807aae1652bbdefc96e90015fe04 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0147_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0147_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.52879206149477, + "lat": 13.70121646785825 + }, + "bbox": [ + 100.50565050739812, + 13.678733427710283, + 100.55193361559142, + 13.723699508006218 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0147_hard_negative_water_urban_packet.png", + "sha256": "852f3174e61af739525ac25b8ac902d15075c86e2742397f5f33fbc54e18ad07", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0147_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0147_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0147_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0147_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0147_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0147_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0147_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 58.419, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 239919, + "min": 26.3739, + "max": 162.514, + "mean": 104.2395, + "median": 106.9899, + "p90": 134.4304 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 58, + "major_roads": 6337, + "schools_waterpoints": 94, + "urban_landuse": 32401, + "water_surface": 55, + "waterways": 209 + }, + "label_counts": { + "vector_label": 4, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0148_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0148_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..a8bc310f3db2d9b92e331e89a8ae28d37827fb5f --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0148_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0148_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.60396571642788, + "lat": 13.664927494446648 + }, + "bbox": [ + 100.58082773045604, + 13.64244445429868, + 100.62710370239972, + 13.687410534594616 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0148_hard_negative_water_urban_packet.png", + "sha256": "63ce76c144e423945c60b10ad0d15fc3c290c5d9d75b00ca336dcb4efc93adb5", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0148_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0148_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0148_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0148_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0148_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0148_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0148_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 60.6345, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 253274, + "min": 13.1929, + "max": 91.9752, + "mean": 52.4381, + "median": 51.9429, + "p90": 73.4823 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 8, + "major_roads": 3982, + "schools_waterpoints": 17, + "urban_landuse": 13625, + "water_surface": 71, + "waterways": 54 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0149_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0149_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..92d970d19f87f3ee4de0cacb70f4d1e2d53a0b07 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0149_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0149_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.68040855419143, + "lat": 13.665408049714298 + }, + "bbox": [ + 100.65727052103668, + 13.64292500956633, + 100.70354658734618, + 13.687891089862266 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0149_hard_negative_water_urban_packet.png", + "sha256": "42e268753c4608f089d8d0e72a32a23e6050ed10d596fb9a4ca10aee42f21ea5", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0149_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0149_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0149_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0149_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0149_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0149_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0149_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 62.445, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 260415, + "min": 3.6382, + "max": 55.017, + "mean": 17.1665, + "median": 16.1659, + "p90": 28.6348 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 5, + "major_roads": 4176, + "schools_waterpoints": 16, + "urban_landuse": 2609, + "water_surface": 145, + "waterways": 30 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0150_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0150_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..b31f0fc1c088af7caf5c20531b75c2b38e4d7637 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0150_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0150_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.61313986743903, + "lat": 13.647453545640994 + }, + "bbox": [ + 100.59000359589615, + 13.624970505493026, + 100.63627613898191, + 13.669936585788962 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0150_hard_negative_water_urban_packet.png", + "sha256": "61b4e04d597bb9b637934c07b847216e373818f3e64e4e71f4e37b928d4347a1", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0150_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0150_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0150_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0150_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0150_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0150_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0150_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 60.8377, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 262144, + "min": 10.3474, + "max": 77.8703, + "mean": 45.2977, + "median": 46.1028, + "p90": 62.0922 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 6, + "major_roads": 4053, + "schools_waterpoints": 21, + "urban_landuse": 27838, + "water_surface": 54, + "waterways": 24 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0153_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0153_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..0897efcd07109a01998fe977da640c556c8fabe8 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0153_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0153_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.53806498053657, + "lat": 13.718129689863584 + }, + "bbox": [ + 100.5149217598939, + 13.695646649715616, + 100.56120820117926, + 13.740612730011552 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0153_hard_negative_water_urban_packet.png", + "sha256": "0a7e635627f04492f1a687f8028c3663450c591bcbe8c4af705ad49dacc1cb9a", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0153_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0153_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0153_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0153_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0153_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0153_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0153_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 60.3598, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 252953, + "min": 10.0067, + "max": 162.5871, + "mean": 94.934, + "median": 92.5768, + "p90": 134.9455 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 166, + "major_roads": 7618, + "schools_waterpoints": 179, + "urban_landuse": 31990, + "water_surface": 140, + "waterways": 145 + }, + "label_counts": { + "vector_label": 14, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0154_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0154_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..3d3d51f4d40c55c6740eb8bfe4fd0f07a034f6fe --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0154_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0154_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.73028552698669, + "lat": 13.850331243200653 + }, + "bbox": [ + 100.70712920202081, + 13.827848203052685, + 100.75344185195257, + 13.872814283348621 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0154_hard_negative_water_urban_packet.png", + "sha256": "63b2e30a86aae2b9a47108f783b49fc908b95eeefea5ab6d2ad2259cf9e827f5", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0154_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0154_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0154_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0154_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0154_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0154_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0154_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 60.6658, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 258022, + "min": 4.413, + "max": 44.1063, + "mean": 19.9229, + "median": 19.8945, + "p90": 29.9872 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 2802, + "schools_waterpoints": 5, + "urban_landuse": 1829, + "water_surface": 20, + "waterways": 32 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0155_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0155_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..4635f7f410bd57bc9c2a1c1df3d311e91e0a5478 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0155_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0155_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.52577008685488, + "lat": 13.73704179879029 + }, + "bbox": [ + 100.50262500003274, + 13.714558758642323, + 100.54891517367702, + 13.759524838938258 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0155_hard_negative_water_urban_packet.png", + "sha256": "5c41ceeb84cf8a882028bdc43e24674cfe8f63e271911bd61dbd4267f0dae7a8", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0155_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0155_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0155_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0155_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0155_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0155_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0155_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 59.4987, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 253311, + "min": 27.9835, + "max": 162.5503, + "mean": 91.1133, + "median": 88.1152, + "p90": 124.3282 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 200, + "major_roads": 7554, + "schools_waterpoints": 211, + "urban_landuse": 24301, + "water_surface": 155, + "waterways": 160 + }, + "label_counts": { + "vector_label": 23, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0156_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0156_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..11745ede752f8daa60eab4eaeb23fb4d9a15d838 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0156_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0156_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.44731960350978, + "lat": 13.729723828669762 + }, + "bbox": [ + 100.42417523913362, + 13.707240788521794, + 100.47046396788595, + 13.75220686881773 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0156_hard_negative_water_urban_packet.png", + "sha256": "ec974a9beba4a81aae524dc97017e7e5c4199f8163b5ea3eea8f1f344019d8eb", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0156_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0156_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0156_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0156_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0156_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0156_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0156_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 58.6154, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261802, + "min": 15.3451, + "max": 141.5714, + "mean": 62.9685, + "median": 59.5448, + "p90": 97.9687 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 22, + "major_roads": 4764, + "schools_waterpoints": 41, + "urban_landuse": 7809, + "water_surface": 32, + "waterways": 196 + }, + "label_counts": { + "vector_label": 6, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0157_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0157_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..3f16227da11a1b4ec83ea1d52518cda8d2329d1e --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0157_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0157_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.42263205664709, + "lat": 13.733897387503156 + }, + "bbox": [ + 100.39948728029988, + 13.711414347355188, + 100.4457768329943, + 13.756380427651123 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0157_hard_negative_water_urban_packet.png", + "sha256": "946df42179f2997ada6e8821c6814c0cc6efe679a1e09bd25f923c8ddcf764c8", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0157_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0157_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0157_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0157_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0157_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0157_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0157_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 59.7989, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261004, + "min": 12.843, + "max": 113.3151, + "mean": 44.1288, + "median": 38.9793, + "p90": 73.8797 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 12, + "major_roads": 4434, + "schools_waterpoints": 21, + "urban_landuse": 5868, + "water_surface": 31, + "waterways": 224 + }, + "label_counts": { + "vector_label": 2, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0158_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0158_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..891fccf6740cea20b32bf27f6bb87612d581f690 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0158_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0158_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.54198336653283, + "lat": 13.694109697032854 + }, + "bbox": [ + 100.51884251202931, + 13.671626656884886, + 100.56512422103636, + 13.716592737180822 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0158_hard_negative_water_urban_packet.png", + "sha256": "1c138217020d9ff0922739d8389f509f8c5ed23367703dc15c4a22ae8daf70e5", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0158_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0158_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0158_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0158_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0158_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0158_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0158_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 61.3875, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 232898, + "min": 8.6082, + "max": 159.8175, + "mean": 79.0394, + "median": 86.0626, + "p90": 123.1791 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 32, + "major_roads": 4988, + "schools_waterpoints": 49, + "urban_landuse": 32429, + "water_surface": 117, + "waterways": 200 + }, + "label_counts": { + "vector_label": 4, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0159_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0159_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..368192a086cb711ebf2f66b36c56fcd209aaa96f --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0159_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0159_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.62408372980593, + "lat": 13.58324532990005 + }, + "bbox": [ + 100.60095373729699, + 13.560762289752082, + 100.64721372231487, + 13.605728370048018 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0159_hard_negative_water_urban_packet.png", + "sha256": "20343e875bb397de6203e3c3f803613c4a737845c4da7d92c208857fe414a17f", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0159_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0159_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0159_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0159_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0159_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0159_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0159_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 63.4511, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 259163, + "min": 7.3498, + "max": 56.6905, + "mean": 26.8586, + "median": 24.9725, + "p90": 44.3721 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 7, + "major_roads": 3847, + "schools_waterpoints": 15, + "urban_landuse": 11308, + "water_surface": 78, + "waterways": 57 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0160_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0160_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..2e5037e549c47505cfac214c75ac258f0a02279c --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0160_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0160_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.53475734900127, + "lat": 13.690770753626698 + }, + "bbox": [ + 100.51161682304704, + 13.66828771347873, + 100.5578978749555, + 13.713253793774665 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0160_hard_negative_water_urban_packet.png", + "sha256": "85b55b000db44c840d5652f55948f06ff2e7e906d7e9fe37db314191811fb536", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0160_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0160_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0160_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0160_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0160_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0160_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0160_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 61.2567, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 225361, + "min": 11.1575, + "max": 158.7263, + "mean": 86.8881, + "median": 91.5191, + "p90": 125.4818 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 32, + "major_roads": 5005, + "schools_waterpoints": 42, + "urban_landuse": 31483, + "water_surface": 89, + "waterways": 204 + }, + "label_counts": { + "vector_label": 4, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0162_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0162_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..9710e340bc5737b46dac89a357217dcdddacd9fa --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0162_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0162_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.53848885693526, + "lat": 13.769835848479737 + }, + "bbox": [ + 100.51534052742068, + 13.747352808331769, + 100.56163718644984, + 13.792318888627705 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0162_hard_negative_water_urban_packet.png", + "sha256": "760d94015c4f2cd5cca544d6e5bea6ebe854859d30e09dc58f67e2de6931eff5", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0162_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0162_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0162_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0162_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0162_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0162_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0162_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 57.2024, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261802, + "min": 24.6244, + "max": 143.3577, + "mean": 91.2551, + "median": 93.2587, + "p90": 118.3632 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 96, + "major_roads": 6648, + "schools_waterpoints": 94, + "urban_landuse": 15285, + "water_surface": 233, + "waterways": 126 + }, + "label_counts": { + "vector_label": 19, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0163_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0163_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..8061b0a592b99ae3251a69f4a19fce46ecee7849 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0163_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0163_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.68501808059959, + "lat": 13.643440346733202 + }, + "bbox": [ + 100.66188220246568, + 13.620957306585234, + 100.7081539587335, + 13.66592338688117 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0163_hard_negative_water_urban_packet.png", + "sha256": "87640583e7166803599557502ba185dc5d5bb0754c48fa0bf45f73aafdbc2631", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0163_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0163_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0163_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0163_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0163_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0163_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0163_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 65.2327, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261270, + "min": 2.6417, + "max": 35.9601, + "mean": 8.9152, + "median": 7.7225, + "p90": 16.0089 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 3612, + "schools_waterpoints": 8, + "urban_landuse": 1510, + "water_surface": 134, + "waterways": 18 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0165_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0165_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..e141e4461fe6073a1199f4eb00316dd97370464a --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0165_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0165_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.5692720361651, + "lat": 13.807278190170942 + }, + "bbox": [ + 100.54611999394663, + 13.784795150022974, + 100.59242407838357, + 13.82976123031891 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0165_hard_negative_water_urban_packet.png", + "sha256": "3d5df5d6a4f409a7406cfaabdaee832c974ec7013587c590513abae5e4f70f4b", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0165_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0165_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0165_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0165_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0165_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0165_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0165_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 57.1176, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 262144, + "min": 27.0849, + "max": 144.0459, + "mean": 79.8767, + "median": 80.5298, + "p90": 110.5403 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 44, + "major_roads": 5023, + "schools_waterpoints": 35, + "urban_landuse": 3989, + "water_surface": 67, + "waterways": 67 + }, + "label_counts": { + "vector_label": 4, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0166_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0166_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..58e080621054500ccc72be59cad92facd35b7916 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0166_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0166_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.67330792428577, + "lat": 13.681370209029799 + }, + "bbox": [ + 100.65016832286523, + 13.658887168881831, + 100.6964475257063, + 13.703853249177767 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0166_hard_negative_water_urban_packet.png", + "sha256": "286b1e65d20ee58d358ba85481e36628f7ac8c41322485e73155965cc39faebd", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0166_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0166_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0166_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0166_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0166_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0166_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0166_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 61.5398, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 255541, + "min": 5.8629, + "max": 56.8711, + "mean": 21.2565, + "median": 19.1027, + "p90": 35.0959 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 4, + "major_roads": 3957, + "schools_waterpoints": 17, + "urban_landuse": 3170, + "water_surface": 95, + "waterways": 27 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0168_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0168_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..297d7189190d457f4a1f77a05ae633b49b5f5900 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0168_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0168_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.65125951491714, + "lat": 13.796171094854316 + }, + "bbox": [ + 100.62810857521056, + 13.773688054706348, + 100.67441045462373, + 13.818654135002284 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0168_hard_negative_water_urban_packet.png", + "sha256": "e24ec4adad251c605ebc39779461ec83c2217bed15514f8e3f743f594e7627b0", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0168_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0168_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0168_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0168_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0168_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0168_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0168_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 59.3568, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 260607, + "min": 13.8239, + "max": 136.8428, + "mean": 49.6393, + "median": 42.5585, + "p90": 96.2026 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 14, + "major_roads": 3912, + "schools_waterpoints": 23, + "urban_landuse": 7754, + "water_surface": 30, + "waterways": 57 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0169_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0169_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..4a48222f0dd8b36fd92bbe169df60fac4ffa8152 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0169_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0169_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.54809008731932, + "lat": 13.729987421456267 + }, + "bbox": [ + 100.52494569692804, + 13.707504381308299, + 100.5712344777106, + 13.752470461604235 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0169_hard_negative_water_urban_packet.png", + "sha256": "52ecac83f65a65f1a6337d6c76b607478e95d444b57024632756b734e7cf4cdd", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0169_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0169_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0169_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0169_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0169_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0169_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0169_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 60.0639, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 259196, + "min": 27.7733, + "max": 162.5997, + "mean": 88.1359, + "median": 86.5927, + "p90": 124.287 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 206, + "major_roads": 7622, + "schools_waterpoints": 195, + "urban_landuse": 22104, + "water_surface": 157, + "waterways": 127 + }, + "label_counts": { + "vector_label": 11, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0170_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0170_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..8549ced5a9d25d59fa8bccac60c09f85cee16595 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0170_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0170_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.57825842715974, + "lat": 13.739536006872276 + }, + "bbox": [ + 100.55511309400735, + 13.717052966724308, + 100.60140376031212, + 13.762019047020244 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0170_hard_negative_water_urban_packet.png", + "sha256": "6af3061d4ebffcfc18fa93c8162afc219236af15c548f16da06b183d95e73fa0", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0170_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0170_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0170_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0170_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0170_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0170_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0170_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 58.9144, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 260938, + "min": 25.6105, + "max": 137.6698, + "mean": 78.7762, + "median": 83.4845, + "p90": 97.4314 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 101, + "major_roads": 5375, + "schools_waterpoints": 114, + "urban_landuse": 11715, + "water_surface": 27, + "waterways": 79 + }, + "label_counts": { + "vector_label": 6, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0171_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0171_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..83a75a8f7681ee12f985d53b0a4e238c1401e5ed --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0171_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0171_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.59684044269491, + "lat": 13.612510905276855 + }, + "bbox": [ + 100.5737075922798, + 13.590027865128887, + 100.61997329311002, + 13.634993945424823 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0171_hard_negative_water_urban_packet.png", + "sha256": "c15452b473d7744ebc0512a757ffcd78cf4a6851ba6a0e0df9c42c00dbc88764", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0171_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0171_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0171_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0171_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0171_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0171_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0171_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 59.4358, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 235764, + "min": 9.7556, + "max": 67.8793, + "mean": 36.1091, + "median": 35.6982, + "p90": 52.3846 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 8, + "major_roads": 3432, + "schools_waterpoints": 21, + "urban_landuse": 22675, + "water_surface": 37, + "waterways": 60 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0173_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0173_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..93b72be85cb5868fcf25e4901b74d69bf4c8653f --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0173_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0173_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.53706135791947, + "lat": 13.757094938325128 + }, + "bbox": [ + 100.5139142892413, + 13.73461189817716, + 100.56020842659764, + 13.779577978473096 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0173_hard_negative_water_urban_packet.png", + "sha256": "c7bc56a03322013d022973022b926cfcf50401ff2a953a97ad605b476afb7866", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0173_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0173_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0173_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0173_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0173_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0173_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0173_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 59.1907, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261460, + "min": 24.7326, + "max": 141.5375, + "mean": 86.2258, + "median": 88.0776, + "p90": 116.1125 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 158, + "major_roads": 6929, + "schools_waterpoints": 142, + "urban_landuse": 17088, + "water_surface": 250, + "waterways": 107 + }, + "label_counts": { + "vector_label": 19, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0175_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0175_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..bb1044f48c3a93506f05e00b96535e8745e8fbd7 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0175_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0175_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.52390149273998, + "lat": 13.691699030620667 + }, + "bbox": [ + 100.50076087545287, + 13.669215990472699, + 100.54704211002709, + 13.714182070768635 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0175_hard_negative_water_urban_packet.png", + "sha256": "225eb83057c77901b8d5370bcbc5f4d748bea2e2ee1641398924fd5a570b0b8a", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0175_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0175_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0175_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0175_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0175_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0175_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0175_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 58.9387, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 232397, + "min": 22.7125, + "max": 159.7452, + "mean": 96.2484, + "median": 99.5444, + "p90": 125.9337 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 35, + "major_roads": 5649, + "schools_waterpoints": 56, + "urban_landuse": 28187, + "water_surface": 35, + "waterways": 204 + }, + "label_counts": { + "vector_label": 4, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0176_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0176_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..74f81a5a3e8e723c72d7193b5d755bbdea301da3 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0176_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0176_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.49446216657218, + "lat": 13.750506681507735 + }, + "bbox": [ + 100.471315749363, + 13.728023641359767, + 100.51760858378135, + 13.772989721655703 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0176_hard_negative_water_urban_packet.png", + "sha256": "c771c3283e4c3473db5030edfc983454d3d9cdd1661dec13974439183e357076", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0176_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0176_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0176_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0176_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0176_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0176_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0176_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 57.9339, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 241946, + "min": 24.7608, + "max": 158.3482, + "mean": 93.029, + "median": 93.1238, + "p90": 121.0003 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 104, + "major_roads": 5860, + "schools_waterpoints": 181, + "urban_landuse": 19360, + "water_surface": 70, + "waterways": 190 + }, + "label_counts": { + "vector_label": 14, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0179_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0179_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..83a5458a8852a5e9889c22546a2447d9ab546ae7 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0179_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0179_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.44433855982291, + "lat": 13.748584411790926 + }, + "bbox": [ + 100.42119233262964, + 13.726101371642958, + 100.46748478701618, + 13.771067451938894 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0179_hard_negative_water_urban_packet.png", + "sha256": "4e739c3f01391913749df630c5cad7a22b8b6f768549c6f6957d963d807d3830", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0179_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0179_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0179_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0179_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0179_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0179_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0179_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 60.3997, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261460, + "min": 10.1279, + "max": 118.8217, + "mean": 44.032, + "median": 39.2715, + "p90": 81.1069 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 4628, + "schools_waterpoints": 37, + "urban_landuse": 8530, + "water_surface": 54, + "waterways": 179 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0180_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0180_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..6528050fc1138e1529446f97250ae29a17dd7423 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0180_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0180_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.67554147812231, + "lat": 13.791930053773065 + }, + "bbox": [ + 100.65239095913252, + 13.769447013625097, + 100.6986919971121, + 13.814413093921033 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0180_hard_negative_water_urban_packet.png", + "sha256": "a3a68a4d44a4969524d8caaa293f172b00b557ea7b42d9aadfbac79ba4545b5c", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0180_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0180_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0180_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0180_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0180_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0180_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0180_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 59.2445, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261324, + "min": 13.6819, + "max": 115.815, + "mean": 36.4807, + "median": 33.7371, + "p90": 50.3341 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 14, + "major_roads": 3694, + "schools_waterpoints": 20, + "urban_landuse": 9549, + "water_surface": 51, + "waterways": 91 + }, + "label_counts": { + "vector_label": 3, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0182_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0182_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..865bef8cbef29d05cb0d25b930b01a96eb4b3c5e --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0182_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0182_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.59650291064902, + "lat": 13.645676835633756 + }, + "bbox": [ + 100.57336681329049, + 13.623193795485788, + 100.61963900800755, + 13.668159875781724 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0182_hard_negative_water_urban_packet.png", + "sha256": "9d2739ecf3d25a78a30a3ac4c43b3d9a2ba69d20c5c69a71491cfd2081790cf4", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0182_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0182_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0182_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0182_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0182_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0182_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0182_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 62.7861, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 255789, + "min": 10.911, + "max": 75.2586, + "mean": 46.4275, + "median": 47.2466, + "p90": 60.1473 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 2, + "major_roads": 3946, + "schools_waterpoints": 15, + "urban_landuse": 28467, + "water_surface": 47, + "waterways": 36 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0183_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0183_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..edc1f0d406ef6d1d03a75b2f845b1c9c57fbbe4e --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0183_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0183_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.50034796393743, + "lat": 13.690343953990087 + }, + "bbox": [ + 100.47720747997359, + 13.66786091384212, + 100.52348844790127, + 13.712826994138055 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0183_hard_negative_water_urban_packet.png", + "sha256": "f0879eeadf1bb3b3a72c7318f333aa004869db4abdeb1bc479ed0b05e229e809", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0183_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0183_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0183_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0183_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0183_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0183_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0183_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 57.1576, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 229157, + "min": 24.857, + "max": 158.1759, + "mean": 87.3794, + "median": 84.9997, + "p90": 124.4385 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 15, + "major_roads": 5002, + "schools_waterpoints": 30, + "urban_landuse": 5618, + "water_surface": 9, + "waterways": 163 + }, + "label_counts": { + "vector_label": 10, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0185_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0185_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..410ab9dc163168b8859d21d12b81f85687c90088 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0185_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0185_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.60131139830197, + "lat": 13.629910337628763 + }, + "bbox": [ + 100.57817684556332, + 13.607427297480795, + 100.62444595104063, + 13.65239337777673 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0185_hard_negative_water_urban_packet.png", + "sha256": "4d33b9739b26045fe667e4921c1f01e7e86454a37c33ae42c2bf3c011fd5ee53", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0185_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0185_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0185_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0185_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0185_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0185_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0185_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 61.8582, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 254210, + "min": 9.7137, + "max": 72.9998, + "mean": 42.9713, + "median": 44.506, + "p90": 57.5239 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 5, + "major_roads": 3769, + "schools_waterpoints": 15, + "urban_landuse": 37755, + "water_surface": 38, + "waterways": 47 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0186_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0186_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..538b6efd593f6df48babe8e7a038dbcb18fe559f --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0186_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0186_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.64740794992727, + "lat": 13.603937405567077 + }, + "bbox": [ + 100.62427593744854, + 13.581454365419109, + 100.670539962406, + 13.626420445715045 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0186_hard_negative_water_urban_packet.png", + "sha256": "00b1532f6ae7f17a357c9b113f62fd1a3af66dbcb7c6a20363a5026b8493e657", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0186_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0186_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0186_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0186_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0186_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0186_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0186_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 61.5367, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261156, + "min": 3.4721, + "max": 57.6502, + "mean": 18.3797, + "median": 15.2224, + "p90": 34.6314 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 5, + "major_roads": 4290, + "schools_waterpoints": 3, + "urban_landuse": 28828, + "water_surface": 74, + "waterways": 36 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0188_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0188_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..95aa30209fe7416981db18f67ca4b34d9bbcac30 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0188_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0188_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.60923914000742, + "lat": 13.61605508451575 + }, + "bbox": [ + 100.58610594303066, + 13.593572044367782, + 100.63237233698418, + 13.638538124663718 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0188_hard_negative_water_urban_packet.png", + "sha256": "f32fb2130a9f09b6dbebad83bcc1a78e4d53593efeb3e7e043e75c00dec78831", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0188_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0188_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0188_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0188_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0188_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0188_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0188_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 58.5693, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 248419, + "min": 10.0871, + "max": 69.399, + "mean": 38.2778, + "median": 38.5725, + "p90": 52.7143 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 9, + "major_roads": 4032, + "schools_waterpoints": 21, + "urban_landuse": 32892, + "water_surface": 44, + "waterways": 45 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0189_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0189_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..db18b8a6cfce1ee1e40cad895dc9658d3a13022e --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0189_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0189_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.70296657428351, + "lat": 13.898849488249786 + }, + "bbox": [ + 100.67980540533912, + 13.876366448101818, + 100.72612774322789, + 13.921332528397754 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0189_hard_negative_water_urban_packet.png", + "sha256": "c4ee97964271b5e819fc0dcb68dfccca8afa66d4a93eeb032f6d2dc44bde346d", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0189_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0189_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0189_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0189_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0189_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0189_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0189_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 62.9804, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 259656, + "min": 2.2513, + "max": 48.0244, + "mean": 12.9524, + "median": 12.2311, + "p90": 18.8145 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 8, + "major_roads": 3079, + "schools_waterpoints": 8, + "urban_landuse": 4168, + "water_surface": 16, + "waterways": 20 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0190_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0190_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..5248a8d422db6f750e9eb77e299a5d328b8f2874 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0190_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0190_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.53525925044042, + "lat": 13.672303132679419 + }, + "bbox": [ + 100.51212054009724, + 13.649820092531451, + 100.5583979607836, + 13.694786172827387 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0190_hard_negative_water_urban_packet.png", + "sha256": "e0ba143db5ed55054a36efbef78685ab696f096f0821a244abf53ba06bff83c7", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0190_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0190_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0190_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0190_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0190_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0190_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0190_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 59.2144, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 212387, + "min": 11.4134, + "max": 123.8141, + "mean": 59.6946, + "median": 54.768, + "p90": 99.6244 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 12, + "major_roads": 3815, + "schools_waterpoints": 31, + "urban_landuse": 16733, + "water_surface": 93, + "waterways": 214 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0191_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0191_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..449f32268d687a06c5f33d70a3ec57217a6d243c --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0191_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0191_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.81329964097576, + "lat": 13.852036333747108 + }, + "bbox": [ + 100.7901431460924, + 13.82955329359914, + 100.83645613585911, + 13.874519373895076 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0191_hard_negative_water_urban_packet.png", + "sha256": "0a47008dcbac834088571963fe25040e52c259bbc447aa6c250417d7fc92e849", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0191_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0191_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0191_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0191_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0191_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0191_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0191_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 55.2775, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 259413, + "min": 2.4776, + "max": 8.5205, + "mean": 4.9451, + "median": 4.6683, + "p90": 6.749 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 1519, + "schools_waterpoints": 2, + "urban_landuse": 2199, + "water_surface": 3, + "waterways": 19 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0193_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0193_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..3bed574f8020fd94c2f3ce87c89a5763d5fdf96e --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0193_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0193_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.36563520272193, + "lat": 13.567752211285868 + }, + "bbox": [ + 100.34250672045255, + 13.5452691711379, + 100.38876368499132, + 13.590235251433835 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0193_hard_negative_water_urban_packet.png", + "sha256": "fc8e158f9c839e25b8c84729c91c2818a13c4f8a8172db17f1d8e5209ce41dc8", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0193_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0193_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0193_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0193_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0193_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0193_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0193_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 67.9502, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 121919, + "min": 1.3176, + "max": 8.5, + "mean": 4.064, + "median": 4.2412, + "p90": 5.4142 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 2476, + "schools_waterpoints": 4, + "urban_landuse": 3322, + "water_surface": 12, + "waterways": 20 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0195_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0195_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..5156d0037e5372759482a166e9e2f7010c764c6e --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0195_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0195_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.5340148630693, + "lat": 13.684837498855552 + }, + "bbox": [ + 100.51087492072556, + 13.662354458707584, + 100.55715480541305, + 13.70732053900352 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0195_hard_negative_water_urban_packet.png", + "sha256": "d5f93d772c624cf2233b5154264695831d253efba69c2c56ad5d56b7ebaeaff0", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0195_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0195_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0195_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0195_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0195_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0195_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0195_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 60.932, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 223668, + "min": 11.508, + "max": 153.1949, + "mean": 77.7797, + "median": 79.7538, + "p90": 120.6768 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 26, + "major_roads": 4598, + "schools_waterpoints": 40, + "urban_landuse": 26794, + "water_surface": 93, + "waterways": 245 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0196_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0196_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..8bbda5914fd98878bbfc1c0038b64476561bfb6c --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0196_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0196_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.37053498743127, + "lat": 13.79152260709365 + }, + "bbox": [ + 100.34738450885322, + 13.769039566945683, + 100.39368546600932, + 13.814005647241618 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0196_hard_negative_water_urban_packet.png", + "sha256": "de572fa52a6ff61ac4115e0133e0c4af85b7664ff603c9d3548c996ccd557c49", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0196_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0196_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0196_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0196_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0196_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0196_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0196_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 59.7974, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261783, + "min": 3.5464, + "max": 30.8332, + "mean": 10.6445, + "median": 10.1477, + "p90": 15.9321 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 2, + "major_roads": 3367, + "schools_waterpoints": 5, + "urban_landuse": 691, + "water_surface": 17, + "waterways": 51 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0199_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0199_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..82187fe0e470511ee5afe4a97b2625d2e1d36bb3 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0199_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0199_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.52431759373499, + "lat": 13.705371996495202 + }, + "bbox": [ + 100.50117563038201, + 13.682888956347234, + 100.54745955708798, + 13.72785503664317 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0199_hard_negative_water_urban_packet.png", + "sha256": "1546220c30caa3019c904685c910d9bc8454bce3929a611b5463055c48875fb3", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0199_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0199_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0199_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0199_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0199_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0199_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0199_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 58.0584, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 243925, + "min": 26.6778, + "max": 162.6188, + "mean": 107.6163, + "median": 109.2599, + "p90": 135.0396 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 81, + "major_roads": 6707, + "schools_waterpoints": 102, + "urban_landuse": 30245, + "water_surface": 65, + "waterways": 195 + }, + "label_counts": { + "vector_label": 4, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0200_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0200_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..806dea4c1bc0b07f4771824e786e2e5126c52fd3 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0200_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0200_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.72565479016828, + "lat": 13.86819956705244 + }, + "bbox": [ + 100.70249668342693, + 13.845716526904472, + 100.74881289690963, + 13.890682607200407 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0200_hard_negative_water_urban_packet.png", + "sha256": "0bacbe1c89368047ffb22af0d80472e73249ec272ce4b0e1d39a4e63a15fa1b4", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0200_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0200_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0200_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0200_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0200_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0200_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0200_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 60.3898, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 257850, + "min": 3.9931, + "max": 33.207, + "mean": 15.5426, + "median": 14.7596, + "p90": 24.2524 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 2685, + "schools_waterpoints": 9, + "urban_landuse": 3416, + "water_surface": 25, + "waterways": 12 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0203_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0203_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..074da3be22078824beda915032b0b7d72752a00d --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0203_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0203_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.45413183758856, + "lat": 13.9255228352035 + }, + "bbox": [ + 100.43096799768254, + 13.903039795055532, + 100.47729567749458, + 13.948005875351468 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0203_hard_negative_water_urban_packet.png", + "sha256": "46b42e04574ca08a133d72fbb236daf9c4cf7e008ce9d24feb849d45a7f5a69b", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0203_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0203_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0203_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0203_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0203_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0203_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0203_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 62.3963, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 258801, + "min": 2.447, + "max": 22.4763, + "mean": 6.332, + "median": 5.4982, + "p90": 10.1041 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 3867, + "schools_waterpoints": 3, + "urban_landuse": 1658, + "water_surface": 11, + "waterways": 63 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0204_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0204_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..c58fdd0c229b3783dd1ebacb725f41625c82ee04 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0204_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0204_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.50164273656456, + "lat": 13.761267860331303 + }, + "bbox": [ + 100.47849525507654, + 13.738784820183335, + 100.52479021805259, + 13.783750900479271 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0204_hard_negative_water_urban_packet.png", + "sha256": "2cd60d89e15371316b8dec949ec6bd08d4375a2b51cba0274d4b0a5d1d8b5398", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0204_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0204_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0204_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0204_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0204_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0204_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0204_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 58.9822, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 242413, + "min": 24.529, + "max": 162.5764, + "mean": 88.3668, + "median": 84.4564, + "p90": 130.5115 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 82, + "major_roads": 5391, + "schools_waterpoints": 174, + "urban_landuse": 17728, + "water_surface": 103, + "waterways": 183 + }, + "label_counts": { + "vector_label": 20, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0205_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0205_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..79516f397a52aa00be04c5769d8b404fa10c7720 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0205_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0205_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.52203794633141, + "lat": 13.71148613622762 + }, + "bbox": [ + 100.49889538058106, + 13.689003096079652, + 100.54518051208176, + 13.733969176375588 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0205_hard_negative_water_urban_packet.png", + "sha256": "377d01f7751990b94acf085aec591c748af8d90403402bff3037ef3408ad1e7c", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0205_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0205_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0205_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0205_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0205_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0205_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0205_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 57.3746, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 250213, + "min": 27.9347, + "max": 162.6094, + "mean": 107.6697, + "median": 109.7265, + "p90": 134.6654 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 133, + "major_roads": 7019, + "schools_waterpoints": 121, + "urban_landuse": 28340, + "water_surface": 70, + "waterways": 194 + }, + "label_counts": { + "vector_label": 11, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0206_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0206_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..49b3c8ffc66141688bd7f84ecbfc759842b04d48 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0206_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0206_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.67741709459142, + "lat": 13.798259772050345 + }, + "bbox": [ + 100.65426594763312, + 13.775776731902377, + 100.70056824154972, + 13.820742812198313 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0206_hard_negative_water_urban_packet.png", + "sha256": "f8cf7003557af5264fb5957e4e618fb3ca9c3429f588ad2923ef504fc7b113b8", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0206_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0206_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0206_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0206_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0206_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0206_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0206_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 57.6626, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 260941, + "min": 13.6585, + "max": 90.143, + "mean": 33.6304, + "median": 32.2633, + "p90": 47.2137 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 13, + "major_roads": 3681, + "schools_waterpoints": 21, + "urban_landuse": 9175, + "water_surface": 60, + "waterways": 104 + }, + "label_counts": { + "vector_label": 2, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0207_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0207_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..4a9c40f1f57c4973ac3c444b847809a787191a92 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0207_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0207_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.44487546791531, + "lat": 13.67326493545994 + }, + "bbox": [ + 100.42173666308058, + 13.650781895311972, + 100.46801427275004, + 13.695747975607908 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0207_hard_negative_water_urban_packet.png", + "sha256": "5dc10d4b4d38c6a392e06091745b2d3d1863515b2ad7e0a2875610686c0c2631", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0207_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0207_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0207_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0207_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0207_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0207_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0207_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 62.637, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 262144, + "min": 14.8492, + "max": 86.5943, + "mean": 47.5956, + "median": 48.2182, + "p90": 66.1905 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 25, + "major_roads": 4652, + "schools_waterpoints": 23, + "urban_landuse": 868, + "water_surface": 5, + "waterways": 157 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0208_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0208_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..79f32a6e3847da89a0f6e8d89f654db581034d33 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0208_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0208_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.572895870595, + "lat": 13.625854235601409 + }, + "bbox": [ + 100.54976171490986, + 13.603371195453441, + 100.59603002628015, + 13.648337275749377 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0208_hard_negative_water_urban_packet.png", + "sha256": "e331411f6b6762f8de84dff29c50fbcd7ccff89f6f19170ce590a6b98102adae", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0208_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0208_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0208_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0208_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0208_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0208_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0208_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 63.9467, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 233159, + "min": 9.5738, + "max": 70.884, + "mean": 35.9365, + "median": 33.4106, + "p90": 55.4847 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 4, + "major_roads": 2978, + "schools_waterpoints": 9, + "urban_landuse": 11968, + "water_surface": 29, + "waterways": 74 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0209_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0209_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..df0ab8461346c9928b15e027be6b41c347c2ea53 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0209_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0209_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.52459076937389, + "lat": 13.781680780533403 + }, + "bbox": [ + 100.50144126653854, + 13.759197740385435, + 100.54774027220924, + 13.80416382068137 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0209_hard_negative_water_urban_packet.png", + "sha256": "8e75d961dbb35c45630f424fb012e5a346a568cc8de600be78f309c7df81bcaa", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0209_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0209_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0209_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0209_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0209_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0209_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0209_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 57.4701, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 251865, + "min": 21.2032, + "max": 137.2859, + "mean": 80.8958, + "median": 82.5928, + "p90": 108.5513 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 73, + "major_roads": 6091, + "schools_waterpoints": 99, + "urban_landuse": 9495, + "water_surface": 198, + "waterways": 107 + }, + "label_counts": { + "vector_label": 6, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0210_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0210_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..aa114544cbd9884889af67c9083a4c533934e1b3 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0210_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0210_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.45456058757507, + "lat": 13.898143711825265 + }, + "bbox": [ + 100.43139948922777, + 13.875660671677297, + 100.47772168592238, + 13.920626751973233 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0210_hard_negative_water_urban_packet.png", + "sha256": "eaf901cae248633fe9f2d9131ca84a7a0802abf9c6333ed03afd3b6b09c6428d", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0210_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0210_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0210_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0210_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0210_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0210_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0210_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 60.7472, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 257226, + "min": 3.8065, + "max": 48.2854, + "mean": 13.7468, + "median": 11.5589, + "p90": 25.1648 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 3851, + "schools_waterpoints": 6, + "urban_landuse": 2862, + "water_surface": 10, + "waterways": 39 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0213_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0213_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..a21ae8a3320426a570abfaf29c443fe6b07575d2 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0213_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0213_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.53940615040672, + "lat": 13.695105762505971 + }, + "bbox": [ + 100.51626519787415, + 13.672622722358003, + 100.56254710293929, + 13.717588802653939 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0213_hard_negative_water_urban_packet.png", + "sha256": "cae52bf6b337af1e0f856402ccc0e211f0bb703aceac0902dab0e6f4e59386ca", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0213_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0213_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0213_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0213_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0213_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0213_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0213_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 61.4112, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 233599, + "min": 8.9554, + "max": 162.6161, + "mean": 84.8696, + "median": 90.9592, + "p90": 126.1936 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 32, + "major_roads": 5280, + "schools_waterpoints": 53, + "urban_landuse": 33625, + "water_surface": 98, + "waterways": 199 + }, + "label_counts": { + "vector_label": 4, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0214_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0214_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..a6bf547e7cf09b43e15017e464ecab4c813f08bc --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0214_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0214_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.59187155511648, + "lat": 13.624539439089466 + }, + "bbox": [ + 100.56873752810952, + 13.602056398941498, + 100.61500558212344, + 13.647022479237434 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0214_hard_negative_water_urban_packet.png", + "sha256": "f6c83b4248b85b365142df9dc07a7ffaf6af5922298e872ff833cdfd51b2a4cc", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0214_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0214_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0214_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0214_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0214_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0214_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0214_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 62.6537, + "repair_attempts": 1 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 244500, + "min": 9.5675, + "max": 70.8492, + "mean": 40.688, + "median": 43.0558, + "p90": 56.7526 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 3331, + "schools_waterpoints": 14, + "urban_landuse": 28486, + "water_surface": 36, + "waterways": 59 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0215_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0215_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..2f2b17e0857df472b025b659dc9effdd723b5aad --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0215_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0215_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.51479795967515, + "lat": 13.766136907930793 + }, + "bbox": [ + 100.49164999633861, + 13.743653867782825, + 100.53794592301169, + 13.788619948078761 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0215_hard_negative_water_urban_packet.png", + "sha256": "1ee36566d321241699760a99c2a1a373905c41cc1d7fdbe7aab22392018c52d9", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0215_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0215_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0215_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0215_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0215_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0215_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0215_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 60.0347, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 250301, + "min": 24.6168, + "max": 162.2373, + "mean": 84.7449, + "median": 83.4165, + "p90": 115.7987 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 85, + "major_roads": 6084, + "schools_waterpoints": 179, + "urban_landuse": 16161, + "water_surface": 173, + "waterways": 134 + }, + "label_counts": { + "vector_label": 19, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0216_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0216_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..1757434ef70817c176edd09c4e7795c5fc6f5a01 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0216_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0216_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.42570847865866, + "lat": 13.603616383696929 + }, + "bbox": [ + 100.40257649754398, + 13.581133343548961, + 100.44884045977335, + 13.626099423844897 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0216_hard_negative_water_urban_packet.png", + "sha256": "e3b7d6b853f1a5ab903d1dba442baa0d10c954fc9184aa7540c44c7f446aec76", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0216_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0216_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0216_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0216_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0216_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0216_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0216_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 65.4042, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 144125, + "min": 2.5257, + "max": 38.0966, + "mean": 16.7908, + "median": 17.7625, + "p90": 26.0211 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 1835, + "schools_waterpoints": 4, + "urban_landuse": 3295, + "water_surface": 588, + "waterways": 70 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0217_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0217_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..c9fa9451a4ff9a80921a4c731ca04f95946b359e --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0217_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0217_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.64519643667292, + "lat": 13.607626594103303 + }, + "bbox": [ + 100.62206406369995, + 13.585143553955335, + 100.66832880964589, + 13.630109634251271 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0217_hard_negative_water_urban_packet.png", + "sha256": "71e79c364186c725c8b33d4e697a34fd96c1966e1d108b90034f970a85dc6dfb", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0217_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0217_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0217_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0217_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0217_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0217_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0217_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 61.3037, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261631, + "min": 3.0413, + "max": 57.7829, + "mean": 19.0257, + "median": 15.6558, + "p90": 36.6041 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 5, + "major_roads": 4274, + "schools_waterpoints": 4, + "urban_landuse": 29526, + "water_surface": 72, + "waterways": 34 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0218_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0218_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..72cf6177edbe7b1fb0645c0763b8a2387dd1f654 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0218_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0218_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.57838281221102, + "lat": 13.762119568380179 + }, + "bbox": [ + 100.55523524645015, + 13.73963652823221, + 100.60153037797188, + 13.784602608528147 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0218_hard_negative_water_urban_packet.png", + "sha256": "52bc1620441fd77c1d876651320fd5e664294a54432079ff6810cd281bb4f490", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0218_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0218_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0218_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0218_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0218_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0218_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0218_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 61.3738, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 262144, + "min": 25.6581, + "max": 144.0491, + "mean": 77.5533, + "median": 75.5574, + "p90": 122.6286 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 68, + "major_roads": 5504, + "schools_waterpoints": 57, + "urban_landuse": 11841, + "water_surface": 68, + "waterways": 122 + }, + "label_counts": { + "vector_label": 13, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0219_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0219_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..e3f1b4af6634441df95cd6307f09806fe6ebbe83 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0219_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0219_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.56141527128013, + "lat": 13.648600223568263 + }, + "bbox": [ + 100.53827888730652, + 13.626117183420295, + 100.58455165525373, + 13.67108326371623 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0219_hard_negative_water_urban_packet.png", + "sha256": "3deee964d815d7a9345725410849393d414faa055598b51b7d9de6c97a385525", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0219_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0219_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0219_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0219_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0219_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0219_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0219_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 65.2694, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 223493, + "min": 9.1202, + "max": 80.6826, + "mean": 35.729, + "median": 35.0302, + "p90": 52.248 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 2678, + "schools_waterpoints": 12, + "urban_landuse": 7179, + "water_surface": 89, + "waterways": 92 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0220_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0220_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..79938b5beaf6226fd74db06791d0742fdf258074 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0220_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0220_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.6133609933976, + "lat": 13.645463601912338 + }, + "bbox": [ + 100.59022491694233, + 13.62298056176437, + 100.63649706985288, + 13.667946642060306 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0220_hard_negative_water_urban_packet.png", + "sha256": "16e08ecce709bfd57c5dc17ff01bce36854c10399a9d36d2d833fa5c8d7516d9", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0220_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0220_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0220_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0220_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0220_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0220_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0220_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 60.5252, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 262144, + "min": 10.2515, + "max": 75.4309, + "mean": 44.5802, + "median": 45.6311, + "p90": 60.5357 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 6, + "major_roads": 4132, + "schools_waterpoints": 21, + "urban_landuse": 30367, + "water_surface": 51, + "waterways": 20 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0221_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0221_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..c040afeed39ee37f57f75af2957b5161094560c5 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0221_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0221_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.56357125303732, + "lat": 13.632430126231775 + }, + "bbox": [ + 100.54043645357027, + 13.609947086083807, + 100.58670605250438, + 13.654913166379743 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0221_hard_negative_water_urban_packet.png", + "sha256": "d042466f72393b51265208fbb4156a73604abaaf54ee4c8c4e377c4192d61604", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0221_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0221_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0221_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0221_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0221_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0221_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0221_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 65.8831, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 232015, + "min": 9.9646, + "max": 66.9775, + "mean": 35.7107, + "median": 33.9735, + "p90": 52.5372 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 2806, + "schools_waterpoints": 8, + "urban_landuse": 7608, + "water_surface": 15, + "waterways": 60 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0223_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0223_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..9030dfa2e629d1ba7235ba4f10ad22d5a0c1640d --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0223_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0223_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.59628322575702, + "lat": 13.632126657346369 + }, + "bbox": [ + 100.57314845600717, + 13.609643617198401, + 100.61941799550686, + 13.654609697494337 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0223_hard_negative_water_urban_packet.png", + "sha256": "6abf11df7748302bce689a425cf3b6807b7382216ee7b09f3ce6b4c7f11fd5e9", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0223_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0223_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0223_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0223_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0223_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0223_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0223_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 63.6256, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 254400, + "min": 10.2616, + "max": 72.9863, + "mean": 43.5742, + "median": 45.7058, + "p90": 57.9169 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 3666, + "schools_waterpoints": 12, + "urban_landuse": 35120, + "water_surface": 25, + "waterways": 53 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0225_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0225_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..dbdb3d56ab3b67a7689abb48c6c7463a167d3c72 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0225_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0225_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.54497403384971, + "lat": 13.72120690138353 + }, + "bbox": [ + 100.52183050975103, + 13.698723861235562, + 100.5681175579484, + 13.743689941531498 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0225_hard_negative_water_urban_packet.png", + "sha256": "2d1a403fc94d2d405d00e7b65ee0315b5e41cf27798c1c24e8aa2f6e7a7e9514", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0225_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0225_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0225_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0225_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0225_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0225_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0225_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 60.1607, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 251262, + "min": 10.3524, + "max": 162.5287, + "mean": 89.8183, + "median": 89.3232, + "p90": 131.5638 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 182, + "major_roads": 7244, + "schools_waterpoints": 184, + "urban_landuse": 27804, + "water_surface": 146, + "waterways": 139 + }, + "label_counts": { + "vector_label": 7, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0226_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0226_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..c8ebce1980faba97289148971a24e6a8c9b7ffab --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0226_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0226_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.83595443932337, + "lat": 13.828318310956867 + }, + "bbox": [ + 100.8128003059482, + 13.805835270808899, + 100.85910857269855, + 13.850801351104835 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0226_hard_negative_water_urban_packet.png", + "sha256": "a3d5c33f0109afead6f62c950fff8c6e7c8b246c2f9b8e682335c5085eac739f", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0226_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0226_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0226_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0226_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0226_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0226_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0226_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 57.916, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 262144, + "min": 3.0729, + "max": 21.9502, + "mean": 7.0642, + "median": 6.224, + "p90": 11.3464 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 1541, + "schools_waterpoints": 3, + "urban_landuse": 7238, + "water_surface": 29, + "waterways": 14 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0229_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0229_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..501eb68b7d835de121d1eae33845c96027937bcb --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0229_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0229_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.59823518346225, + "lat": 13.619446766044486 + }, + "bbox": [ + 100.57510165474298, + 13.596963725896519, + 100.62136871218152, + 13.641929806192454 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0229_hard_negative_water_urban_packet.png", + "sha256": "0b27984a88dcd4f50a9ac53186f12822f51526ae8d5b4a2240f870d05350963a", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0229_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0229_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0229_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0229_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0229_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0229_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0229_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 61.3032, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 243812, + "min": 9.546, + "max": 70.8247, + "mean": 38.745, + "median": 39.553, + "p90": 53.6376 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 5, + "major_roads": 3517, + "schools_waterpoints": 16, + "urban_landuse": 29154, + "water_surface": 41, + "waterways": 52 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0230_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0230_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..60d7361116f4fe32e0ef9159a8cb83ac626a1385 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0230_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0230_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.60384880525172, + "lat": 13.625062341226043 + }, + "bbox": [ + 100.58071472707033, + 13.602579301078075, + 100.6269828834331, + 13.64754538137401 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0230_hard_negative_water_urban_packet.png", + "sha256": "7d26253d55fea4b5674cd5346b35ad76508fdc145b98d1d9830a59e0f31d2c63", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0230_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0230_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0230_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0230_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0230_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0230_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0230_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 60.8281, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 251916, + "min": 9.5613, + "max": 70.8478, + "mean": 41.6576, + "median": 42.7715, + "p90": 56.4797 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 3818, + "schools_waterpoints": 13, + "urban_landuse": 36725, + "water_surface": 43, + "waterways": 47 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0232_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0232_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..1ea330d80d3a2371f7f3f8271b779581829864a4 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0232_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0232_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.63517147191382, + "lat": 13.589793119305858 + }, + "bbox": [ + 100.61204084057114, + 13.56731007915789, + 100.6583021032565, + 13.612276159453826 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0232_hard_negative_water_urban_packet.png", + "sha256": "16376b99b8e2aa5b443819ad011305abd860b40befe2ddba83da20d9d5e69020", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0232_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0232_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0232_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0232_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0232_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0232_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0232_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 63.6852, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 259579, + "min": 7.3824, + "max": 51.6614, + "mean": 21.9981, + "median": 20.9594, + "p90": 34.4154 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 5, + "major_roads": 3980, + "schools_waterpoints": 10, + "urban_landuse": 20026, + "water_surface": 59, + "waterways": 51 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0233_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0233_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..2306423bbf7267fbaa7d89e2ae85bec2ea73abf7 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0233_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0233_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.54378236539957, + "lat": 13.759617783942437 + }, + "bbox": [ + 100.52063504716318, + 13.737134743794469, + 100.56692968363595, + 13.782100824090405 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0233_hard_negative_water_urban_packet.png", + "sha256": "9a2fff0efdce68a265decb1ab82e67d0499fe44ca61a0d199827a2e73c33634f", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0233_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0233_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0233_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0233_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0233_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0233_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0233_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 58.121, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261422, + "min": 30.9143, + "max": 143.9995, + "mean": 92.4009, + "median": 93.6701, + "p90": 122.8491 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 164, + "major_roads": 7115, + "schools_waterpoints": 127, + "urban_landuse": 17498, + "water_surface": 230, + "waterways": 105 + }, + "label_counts": { + "vector_label": 11, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0235_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0235_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..df00df26a1548e5f2fb656fc3dfbfb67d10a8647 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0235_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0235_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.50735648631795, + "lat": 13.739070986701119 + }, + "bbox": [ + 100.4842111990951, + 13.716587946553151, + 100.53050177354079, + 13.761554026849087 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0235_hard_negative_water_urban_packet.png", + "sha256": "641a7d476cc2dda65e8c33b617db5c4ebb8f577ed027442e0bb9434058d6f9d5", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0235_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0235_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0235_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0235_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0235_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0235_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0235_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 57.5018, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 244473, + "min": 37.8177, + "max": 160.7393, + "mean": 97.3845, + "median": 92.3833, + "p90": 127.92 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 137, + "major_roads": 6745, + "schools_waterpoints": 199, + "urban_landuse": 24401, + "water_surface": 89, + "waterways": 219 + }, + "label_counts": { + "vector_label": 26, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0236_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0236_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..724e60200f5590a7aaed7bb537641b6bb426ef81 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0236_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0236_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.72314711090162, + "lat": 13.86392582657529 + }, + "bbox": [ + 100.69998943055468, + 13.841442786427322, + 100.74630479124856, + 13.886408866723258 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0236_hard_negative_water_urban_packet.png", + "sha256": "2a2c5a75cc1403c8180593208241cfdfa63362d74127ec53d3f4454219b17ec8", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0236_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0236_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0236_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0236_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0236_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0236_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0236_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 60.757, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 258005, + "min": 4.2935, + "max": 42.8188, + "mean": 17.4135, + "median": 16.6799, + "p90": 25.9164 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 2791, + "schools_waterpoints": 8, + "urban_landuse": 3436, + "water_surface": 28, + "waterways": 13 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0238_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0238_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..9aee47d7062833da458c1899909835cb5724aad5 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0238_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0238_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.38100594201798, + "lat": 13.63912664962593 + }, + "bbox": [ + 100.357870486609, + 13.616643609477961, + 100.40414139742695, + 13.661609689773897 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0238_hard_negative_water_urban_packet.png", + "sha256": "e9f89ad558330d59b1726fa14bd92b904b233cd78d06a9ef88a240a47b7e6c45", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0238_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0238_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0238_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0238_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0238_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0238_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0238_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 63.5898, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 257851, + "min": 5.9905, + "max": 58.8927, + "mean": 19.7244, + "median": 18.0007, + "p90": 31.536 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 2892, + "schools_waterpoints": 8, + "urban_landuse": 1660, + "water_surface": 33, + "waterways": 26 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0239_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0239_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..65947b903ccb2e87f66fa2785691f2c743dfaf4a --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0239_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0239_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.59393104548955, + "lat": 13.615090110270366 + }, + "bbox": [ + 100.570797942881, + 13.592607070122398, + 100.61706414809811, + 13.637573150418334 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0239_hard_negative_water_urban_packet.png", + "sha256": "994bdeb34af55d10c3600fe1a3e00f5cc86c74d887123f997f114cf38a43da17", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0239_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0239_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0239_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0239_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0239_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0239_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0239_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 60.1375, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 237339, + "min": 9.6766, + "max": 69.037, + "mean": 36.6331, + "median": 36.785, + "p90": 52.5302 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 7, + "major_roads": 3366, + "schools_waterpoints": 22, + "urban_landuse": 23142, + "water_surface": 38, + "waterways": 58 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0240_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0240_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..5b04a7106f5951c387cfe50d3b28d1fbdf440660 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0240_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0240_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.50088644895013, + "lat": 13.753542450233503 + }, + "bbox": [ + 100.4777397315965, + 13.731059410085535, + 100.52403316630375, + 13.776025490381471 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0240_hard_negative_water_urban_packet.png", + "sha256": "06fb9cb9e0a7c15c4062fd1bf8222bf093bffcc5bf5e7e17adeec452f681224f", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0240_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0240_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0240_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0240_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0240_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0240_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0240_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 58.8486, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 241997, + "min": 24.5639, + "max": 162.7049, + "mean": 87.9534, + "median": 86.5226, + "p90": 119.3988 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 98, + "major_roads": 5721, + "schools_waterpoints": 187, + "urban_landuse": 21709, + "water_surface": 87, + "waterways": 185 + }, + "label_counts": { + "vector_label": 19, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0242_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0242_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..787205a13005b7515e134b77ece10de89a366a0a --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0242_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0242_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.52493139705065, + "lat": 13.708752091460855 + }, + "bbox": [ + 100.5017891007093, + 13.686269051312888, + 100.548073693392, + 13.731235131608823 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0242_hard_negative_water_urban_packet.png", + "sha256": "a9becb4611d7cf11ec7a728baed3b144ac79a2b6ff03ae0f54d25fcf57f845ee", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0242_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0242_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0242_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0242_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0242_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0242_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0242_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 58.2456, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 250062, + "min": 27.9336, + "max": 162.6127, + "mean": 106.7693, + "median": 108.7007, + "p90": 134.665 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 125, + "major_roads": 7143, + "schools_waterpoints": 116, + "urban_landuse": 30350, + "water_surface": 79, + "waterways": 205 + }, + "label_counts": { + "vector_label": 8, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0243_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0243_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..17f0836f9e73351be703bb23f84717a72de27aa1 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0243_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0243_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.36634831819656, + "lat": 13.879995350416772 + }, + "bbox": [ + 100.3431890338306, + 13.857512310268804, + 100.38950760256252, + 13.90247839056474 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0243_hard_negative_water_urban_packet.png", + "sha256": "6236b6f123ace4f5a82d461088e9e4303e77bac39e9f0361e068938681f38f15", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0243_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0243_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0243_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0243_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0243_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0243_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0243_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 57.5905, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 262144, + "min": 1.2748, + "max": 9.8205, + "mean": 3.0625, + "median": 2.5227, + "p90": 5.241 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 2814, + "schools_waterpoints": 0, + "urban_landuse": 701, + "water_surface": 6, + "waterways": 35 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0244_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0244_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..39a5b4b8825cfd15c1c0196df6d327d8c74a1c8d --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0244_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0244_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.60057927621922, + "lat": 13.622618720964027 + }, + "bbox": [ + 100.57744543716706, + 13.60013568081606, + 100.62371311527139, + 13.645101761111995 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0244_hard_negative_water_urban_packet.png", + "sha256": "28689a870fbf2033c66c54fe44cee7941347fb7caa1716eb51092e8eaeabc03b", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0244_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0244_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0244_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0244_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0244_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0244_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0244_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 61.0263, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 247577, + "min": 9.7151, + "max": 70.8809, + "mean": 40.6175, + "median": 41.3867, + "p90": 56.0337 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 3617, + "schools_waterpoints": 13, + "urban_landuse": 33452, + "water_surface": 44, + "waterways": 49 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0245_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0245_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..86dfd83e1d73bdb4623565b41ba4050692d5bf40 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0245_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0245_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.45209738823743, + "lat": 13.706808505435044 + }, + "bbox": [ + 100.4289552833785, + 13.684325465287076, + 100.47523949309637, + 13.729291545583012 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0245_hard_negative_water_urban_packet.png", + "sha256": "a6becf23fe8cfcd51ffcf620b821d549174e82d67a4c13f2af28f512f586ec2b", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0245_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0245_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0245_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0245_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0245_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0245_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0245_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 59.4097, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 260513, + "min": 16.8078, + "max": 145.8692, + "mean": 62.704, + "median": 59.5052, + "p90": 95.5994 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 21, + "major_roads": 4654, + "schools_waterpoints": 30, + "urban_landuse": 1698, + "water_surface": 1, + "waterways": 174 + }, + "label_counts": { + "vector_label": 9, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0246_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0246_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..674b89c71cbd2970eb0a3f5597d1b3cbbbd359f6 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0246_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0246_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.42170530433468, + "lat": 13.534324761064184 + }, + "bbox": [ + 100.39858007407838, + 13.511841720916216, + 100.44483053459098, + 13.556807801212152 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0246_hard_negative_water_urban_packet.png", + "sha256": "fbeafe3a9347aff632983ffe27f517a2358a997f17077d94e9c020c879b0c40b", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0246_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0246_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0246_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0246_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0246_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0246_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0246_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 45.4, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 14051, + "min": 1.0927, + "max": 8.2504, + "mean": 3.5073, + "median": 3.205, + "p90": 6.1474 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 477, + "schools_waterpoints": 2, + "urban_landuse": 527, + "water_surface": 425, + "waterways": 48 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0247_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0247_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..e313d67d5ad7670e65948f5196eafa742fc9e00c --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0247_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0247_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.35910315258636, + "lat": 13.68665842650302 + }, + "bbox": [ + 100.33596303116092, + 13.664175386355051, + 100.3822432740118, + 13.709141466650987 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0247_hard_negative_water_urban_packet.png", + "sha256": "773af2029f56a529596a65592a537d9bc8f003b5839fcebeaffb91a3475153ea", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0247_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0247_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0247_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0247_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0247_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0247_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0247_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 61.669, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 262144, + "min": 8.1626, + "max": 77.4091, + "mean": 34.5542, + "median": 33.0119, + "p90": 55.2412 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 31, + "major_roads": 3610, + "schools_waterpoints": 18, + "urban_landuse": 3065, + "water_surface": 11, + "waterways": 30 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0248_hard_negative_water_urban_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0248_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..5fb1b02938ed5f52b074321598acc630fbca1149 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0248_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0248_hard_negative_water_urban", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.38457626395659, + "lat": 13.640817397904852 + }, + "bbox": [ + 100.36144064287856, + 13.618334357756885, + 100.40771188503462, + 13.66330043805282 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0248_hard_negative_water_urban_packet.png", + "sha256": "baf2032496b8264af4431f5c4cff6e806c3141c3fe7cee8cd1f44f55d4b5256e", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0248_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0248_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0248_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0248_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0248_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0248_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0248_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 63.4114, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 259193, + "min": 5.965, + "max": 58.7005, + "mean": 20.8125, + "median": 19.3186, + "p90": 33.1286 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 6, + "major_roads": 3016, + "schools_waterpoints": 9, + "urban_landuse": 1667, + "water_surface": 35, + "waterways": 27 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0249_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0249_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..ba99653b8b35b5e6ebcc14ac7cd77969a3467e18 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0249_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0249_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.53504294617053, + "lat": 13.708296330351839 + }, + "bbox": [ + 100.51190069473351, + 13.685813290203871, + 100.55818519760756, + 13.730779370499807 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0249_exposure_context_packet.png", + "sha256": "b2926ca6d4771b01c49c6282493f87ce868250a3f6a8cb0300590dc6eaa07140", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0249_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0249_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0249_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0249_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0249_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0249_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0249_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 59.9945, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 246875, + "min": 11.0716, + "max": 162.562, + "mean": 101.4115, + "median": 105.2187, + "p90": 135.421 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 130, + "major_roads": 6889, + "schools_waterpoints": 120, + "urban_landuse": 34580, + "water_surface": 85, + "waterways": 187 + }, + "label_counts": { + "vector_label": 8, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0250_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0250_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..8c00f6cb2ab61d24d2d798ebe871e5d828059ea1 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0250_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0250_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.51648998632355, + "lat": 13.716031696110882 + }, + "bbox": [ + 100.4933469725295, + 13.693548655962914, + 100.5396330001176, + 13.73851473625885 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0250_exposure_context_packet.png", + "sha256": "8db464ef1b2c3c906d75edacc140b34ca9316478d8040af9db2eab63617fb892", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0250_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0250_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0250_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0250_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0250_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0250_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0250_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 56.3408, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 244698, + "min": 33.7295, + "max": 162.5245, + "mean": 107.5275, + "median": 111.502, + "p90": 134.9769 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 145, + "major_roads": 6986, + "schools_waterpoints": 146, + "urban_landuse": 25794, + "water_surface": 51, + "waterways": 158 + }, + "label_counts": { + "vector_label": 13, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0251_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0251_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..bab893caa739a3087591780ea36848f523badd31 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0251_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0251_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.52077532997248, + "lat": 13.747169241853353 + }, + "bbox": [ + 100.4976292426498, + 13.724686201705385, + 100.54392141729517, + 13.76965228200132 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0251_exposure_context_packet.png", + "sha256": "0978c0022f07c17b86a56b6175713de487e3d282d0c7dfd94212efc0c2d1d2ba", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0251_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0251_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0251_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0251_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0251_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0251_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0251_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 58.5573, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 255374, + "min": 24.739, + "max": 155.6707, + "mean": 85.3519, + "median": 85.8136, + "p90": 114.466 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 216, + "major_roads": 7304, + "schools_waterpoints": 215, + "urban_landuse": 24119, + "water_surface": 154, + "waterways": 141 + }, + "label_counts": { + "vector_label": 26, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0252_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0252_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..a606ff2219cc46044c32a0c948625e77f9f97d31 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0252_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0252_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.73983784628662, + "lat": 13.743407131883348 + }, + "bbox": [ + 100.71669213072117, + 13.72092409173538, + 100.76298356185207, + 13.765890172031316 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0252_exposure_context_packet.png", + "sha256": "c86414710ae2e066de657d115a3240011b22ac198607b132ff02110599139dba", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0252_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0252_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0252_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0252_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0252_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0252_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0252_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 62.8809, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261802, + "min": 8.5123, + "max": 52.4065, + "mean": 22.4624, + "median": 21.3006, + "p90": 32.4198 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 2894, + "schools_waterpoints": 5, + "urban_landuse": 701, + "water_surface": 91, + "waterways": 20 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0253_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0253_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..6d5b499905d9da0a11f1d752e900ff7e7822bf59 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0253_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0253_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.42027466683855, + "lat": 13.710278651216317 + }, + "bbox": [ + 100.39713222007938, + 13.68779561106835, + 100.44341711359772, + 13.732761691364285 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0253_exposure_context_packet.png", + "sha256": "623c969eac9728ffaa66368f61ee5b383903550c95c73b75409b4573ba4708ae", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0253_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0253_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0253_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0253_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0253_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0253_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0253_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 59.8745, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261099, + "min": 21.6726, + "max": 113.3904, + "mean": 50.7876, + "median": 47.2763, + "p90": 76.8923 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 13, + "major_roads": 4660, + "schools_waterpoints": 19, + "urban_landuse": 1485, + "water_surface": 6, + "waterways": 188 + }, + "label_counts": { + "vector_label": 10, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0255_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0255_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..407093836c730893707ce2b58d48ee6b83a0bb1f --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0255_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0255_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.50654327771004, + "lat": 13.739591567070539 + }, + "bbox": [ + 100.48339793906992, + 13.717108526922571, + 100.52968861635016, + 13.762074607218507 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0255_exposure_context_packet.png", + "sha256": "ba84b6781f4787b801899463cc2d24813f076d442705646c19c3bdd2f6c54f94", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0255_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0255_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0255_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0255_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0255_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0255_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0255_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 57.4732, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 244105, + "min": 32.6354, + "max": 158.3166, + "mean": 97.307, + "median": 92.5731, + "p90": 127.4809 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 139, + "major_roads": 6721, + "schools_waterpoints": 195, + "urban_landuse": 24337, + "water_surface": 87, + "waterways": 221 + }, + "label_counts": { + "vector_label": 20, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0256_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0256_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..1a51eefc0bdba1d428aa9bc1c5a681c67a00ddc2 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0256_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0256_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.5315776947582, + "lat": 13.799679470367929 + }, + "bbox": [ + 100.5084264069088, + 13.777196430219961, + 100.5547289826076, + 13.822162510515897 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0256_exposure_context_packet.png", + "sha256": "adbe8a76595204e80ce76dba583ae7d32d3cb679f34777ee1433d00223048dab", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0256_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0256_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0256_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0256_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0256_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0256_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0256_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 56.2789, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 249642, + "min": 22.3327, + "max": 126.947, + "mean": 78.3782, + "median": 81.2029, + "p90": 99.1233 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 35, + "major_roads": 5730, + "schools_waterpoints": 66, + "urban_landuse": 6915, + "water_surface": 128, + "waterways": 104 + }, + "label_counts": { + "vector_label": 11, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0257_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0257_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..0f9610e3d5fecce43a2fa78b9f1b3d7fcdcc49db --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0257_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0257_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.39556436110625, + "lat": 13.708933132154302 + }, + "bbox": [ + 100.37242204692723, + 13.686450092006334, + 100.41870667528528, + 13.73141617230227 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0257_exposure_context_packet.png", + "sha256": "a2e3a109c8df3050660999594fd7200035bd32a3f5df83f4a9e6d2b672eb2241", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0257_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0257_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0257_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0257_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0257_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0257_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0257_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 58.7134, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261514, + "min": 18.2054, + "max": 83.526, + "mean": 43.5618, + "median": 40.5682, + "p90": 63.1405 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 22, + "major_roads": 4264, + "schools_waterpoints": 22, + "urban_landuse": 647, + "water_surface": 27, + "waterways": 111 + }, + "label_counts": { + "vector_label": 5, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0258_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0258_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..d1d16788b1a7ba7249463743b8300c54ef56954a --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0258_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0258_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.59971090448107, + "lat": 13.711025600699871 + }, + "bbox": [ + 100.57656838411539, + 13.688542560551904, + 100.62285342484675, + 13.73350864084784 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0258_exposure_context_packet.png", + "sha256": "0d031e2b7b6852606af01440ca1e8a1efc26762a6f78e246dd91fb2da28358e7", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0258_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0258_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0258_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0258_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0258_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0258_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0258_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 57.3892, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 253378, + "min": 9.5622, + "max": 110.0496, + "mean": 72.576, + "median": 75.2424, + "p90": 92.9747 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 47, + "major_roads": 4023, + "schools_waterpoints": 45, + "urban_landuse": 3299, + "water_surface": 11, + "waterways": 92 + }, + "label_counts": { + "vector_label": 8, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0259_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0259_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..51fa19fb3c99e68f8c7d5eadc54df35661b2843d --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0259_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0259_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.5035623769467, + "lat": 13.752400157329387 + }, + "bbox": [ + 100.48041577253936, + 13.729917117181419, + 100.52670898135405, + 13.774883197477354 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0259_exposure_context_packet.png", + "sha256": "b9f4349f9a46f07216ee678cf1a0b4d4f9c52ed3e0193666035c7f8171dc83a8", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0259_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0259_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0259_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0259_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0259_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0259_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0259_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 59.0513, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 242414, + "min": 24.3972, + "max": 159.6148, + "mean": 87.3258, + "median": 85.8239, + "p90": 118.2626 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 113, + "major_roads": 5922, + "schools_waterpoints": 189, + "urban_landuse": 22455, + "water_surface": 95, + "waterways": 180 + }, + "label_counts": { + "vector_label": 23, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0261_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0261_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..9aa9b4ba75e4a80a103a036c5d3e40d4e5bf9d19 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0261_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0261_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.48637058893654, + "lat": 13.731051672401497 + }, + "bbox": [ + 100.46322609350413, + 13.70856863225353, + 100.50951508436894, + 13.753534712549465 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0261_exposure_context_packet.png", + "sha256": "8b47f3817ecaff38fa16be775a251c34a5464889f94b8f2fc8bdaeb0adbaa0e0", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0261_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0261_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0261_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0261_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0261_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0261_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0261_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 55.6499, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 249653, + "min": 33.5181, + "max": 158.3013, + "mean": 104.4368, + "median": 105.0355, + "p90": 138.0018 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 25, + "major_roads": 5929, + "schools_waterpoints": 107, + "urban_landuse": 10540, + "water_surface": 42, + "waterways": 192 + }, + "label_counts": { + "vector_label": 7, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0262_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0262_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..052510cddcfb35fe9d111abcea86317bdb0e84e0 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0262_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0262_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.38454584910156, + "lat": 13.78563632443695 + }, + "bbox": [ + 100.36139595419591, + 13.763153284288983, + 100.4076957440072, + 13.808119364584918 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0262_exposure_context_packet.png", + "sha256": "f59f564f9e0bfb9e3165fdae00582431f88c52c96189ede3eac8e2f1f2d62e81", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0262_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0262_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0262_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0262_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0262_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0262_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0262_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 59.526, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 262144, + "min": 4.2755, + "max": 40.099, + "mean": 13.5897, + "median": 12.8032, + "p90": 20.8982 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 2, + "major_roads": 3358, + "schools_waterpoints": 6, + "urban_landuse": 1097, + "water_surface": 39, + "waterways": 53 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0263_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0263_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..192e097260a96770fb6bde0a8d4df3ced7953572 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0263_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0263_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.49570850073839, + "lat": 13.751819707001156 + }, + "bbox": [ + 100.47256195372017, + 13.729336666853188, + 100.5188550477566, + 13.774302747149124 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0263_exposure_context_packet.png", + "sha256": "c4d6f4db6b5ed18f1611d469fcc76a8688b1b9743aef6f2787ce4e78973ad659", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0263_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0263_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0263_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0263_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0263_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0263_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0263_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 58.0443, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 242073, + "min": 24.4685, + "max": 158.7918, + "mean": 91.378, + "median": 91.0049, + "p90": 120.4812 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 103, + "major_roads": 5798, + "schools_waterpoints": 183, + "urban_landuse": 19863, + "water_surface": 71, + "waterways": 185 + }, + "label_counts": { + "vector_label": 14, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0264_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0264_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..5a57cf6aaa21ee8c7a51dc21674d409daf174ffe --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0264_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0264_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.59714792222003, + "lat": 13.872645079445745 + }, + "bbox": [ + 100.57398937179306, + 13.850162039297777, + 100.620306472647, + 13.895128119593712 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0264_exposure_context_packet.png", + "sha256": "a7d7138a1170d37d24bd724cb10409337ce6c05bd40cabc3cced89ad48c531c7", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0264_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0264_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0264_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0264_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0264_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0264_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0264_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 58.0273, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 262144, + "min": 15.0576, + "max": 92.7121, + "mean": 51.3306, + "median": 50.8634, + "p90": 71.5406 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 10, + "major_roads": 4050, + "schools_waterpoints": 16, + "urban_landuse": 3500, + "water_surface": 47, + "waterways": 56 + }, + "label_counts": { + "vector_label": 6, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0265_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0265_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..b1fe5e76b27555f71e739c3578917c98c045ce1b --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0265_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0265_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.50746402616727, + "lat": 13.734963710248465 + }, + "bbox": [ + 100.48431914454153, + 13.712480670100497, + 100.53060890779301, + 13.757446750396433 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0265_exposure_context_packet.png", + "sha256": "53d5857ad78c91cfb4a9b1cbbde4fde627a4a39fc47ea337699a1ee11ee60587", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0265_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0265_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0265_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0265_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0265_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0265_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0265_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 57.2962, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 244651, + "min": 38.3018, + "max": 161.4971, + "mean": 99.694, + "median": 94.8043, + "p90": 132.6981 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 123, + "major_roads": 6677, + "schools_waterpoints": 194, + "urban_landuse": 23874, + "water_surface": 84, + "waterways": 218 + }, + "label_counts": { + "vector_label": 24, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0268_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0268_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..4dcb4454ad1fe5186492f5c1985533952032a3bf --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0268_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0268_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.49000460073707, + "lat": 13.872462597981537 + }, + "bbox": [ + 100.46684606852578, + 13.849979557833569, + 100.51316313294835, + 13.894945638129505 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0268_exposure_context_packet.png", + "sha256": "fca5b813e664812b23445fce544e1e2bbb50b32dfd8cc4334a4d60351c49cd12", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0268_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0268_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0268_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0268_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0268_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0268_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0268_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 58.8403, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 244986, + "min": 7.3843, + "max": 79.3345, + "mean": 38.3474, + "median": 38.1845, + "p90": 59.6967 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 8, + "major_roads": 4185, + "schools_waterpoints": 10, + "urban_landuse": 2658, + "water_surface": 15, + "waterways": 30 + }, + "label_counts": { + "vector_label": 6, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0269_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0269_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..7e76d01ca25d2d844994e4cabfd8e20f09784135 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0269_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0269_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.5317114918092, + "lat": 13.684795168444593 + }, + "bbox": [ + 100.50857155362819, + 13.662312128296625, + 100.55485142999022, + 13.70727820859256 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0269_exposure_context_packet.png", + "sha256": "64993f9bed4ac85497f71858f2395047b603b0979db13b47a473e2e0ab1f81cd", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0269_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0269_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0269_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0269_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0269_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0269_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0269_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 59.9749, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 223020, + "min": 12.5443, + "max": 153.3212, + "mean": 81.3412, + "median": 82.2024, + "p90": 120.9832 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 27, + "major_roads": 4764, + "schools_waterpoints": 46, + "urban_landuse": 26261, + "water_surface": 66, + "waterways": 246 + }, + "label_counts": { + "vector_label": 2, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0270_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0270_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..d572bfcd3bc666df43bbe78acd2f53b2ba973597 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0270_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0270_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.74266502287055, + "lat": 13.876394229580937 + }, + "bbox": [ + 100.71950609813702, + 13.853911189432969, + 100.76582394760409, + 13.898877269728905 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0270_exposure_context_packet.png", + "sha256": "beeb0f467805ee2205ad061f4f03a38171c336723a070fff8a29a3eab9963d8a", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0270_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0270_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0270_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0270_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0270_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0270_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0270_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 59.6104, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 258215, + "min": 2.2671, + "max": 27.1465, + "mean": 9.2346, + "median": 7.8421, + "p90": 16.5964 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 1384, + "schools_waterpoints": 3, + "urban_landuse": 754, + "water_surface": 19, + "waterways": 17 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0272_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0272_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..54e77a3a97f467aa8debeaa6291ce8dec3f7a94a --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0272_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0272_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.52321693155628, + "lat": 13.74028533116884 + }, + "bbox": [ + 100.50007152439035, + 13.717802291020872, + 100.5463623387222, + 13.762768371316808 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0272_exposure_context_packet.png", + "sha256": "b29ad3d0689934ec27263f9ce7d7f84fb22e5307a45977b424550b06f6b9adf1", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0272_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0272_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0272_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0272_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0272_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0272_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0272_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 58.9743, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 253725, + "min": 24.726, + "max": 162.4628, + "mean": 90.4814, + "median": 88.8226, + "p90": 119.306 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 198, + "major_roads": 7516, + "schools_waterpoints": 209, + "urban_landuse": 23720, + "water_surface": 150, + "waterways": 164 + }, + "label_counts": { + "vector_label": 24, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0273_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0273_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..2d85c3dcf357224cba9c8a24465cc5be84444688 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0273_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0273_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.55496659563948, + "lat": 13.743868137458655 + }, + "bbox": [ + 100.53182083452525, + 13.721385097310687, + 100.57811235675372, + 13.766351177606623 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0273_exposure_context_packet.png", + "sha256": "2a915cc9bbf8aef56bcc69149c86a180c52a0f6c7a721a83967300c86a570235", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0273_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0273_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0273_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0273_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0273_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0273_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0273_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 59.107, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 259864, + "min": 27.7697, + "max": 159.7825, + "mean": 85.444, + "median": 85.1466, + "p90": 116.6671 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 204, + "major_roads": 6850, + "schools_waterpoints": 159, + "urban_landuse": 16497, + "water_surface": 129, + "waterways": 101 + }, + "label_counts": { + "vector_label": 4, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0274_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0274_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..4ce7c4f7550aa156533c2691a29dcebac32059ef --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0274_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0274_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.548464332875, + "lat": 13.717719230265585 + }, + "bbox": [ + 100.52532115270371, + 13.695236190117617, + 100.57160751304629, + 13.740202270413553 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0274_exposure_context_packet.png", + "sha256": "00831d169ec99ae92912ce496576acb68c2f58798b19af0d8364be082fc43c10", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0274_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0274_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0274_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0274_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0274_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0274_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0274_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 61.4083, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 246980, + "min": 8.9672, + "max": 162.5458, + "mean": 87.5669, + "median": 89.1901, + "p90": 129.0764 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 156, + "major_roads": 6793, + "schools_waterpoints": 160, + "urban_landuse": 27107, + "water_surface": 132, + "waterways": 126 + }, + "label_counts": { + "vector_label": 7, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0275_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0275_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..48cbfc6f501f237285235a40ba0761d3a88fb2cb --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0275_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0275_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.5239868975025, + "lat": 13.88115497674593 + }, + "bbox": [ + 100.5008274973065, + 13.858671936597963, + 100.54714629769849, + 13.903638016893899 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0275_exposure_context_packet.png", + "sha256": "164294d629af1824648fed49d7623cccd850e785c930aeef18026b5cc583097a", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0275_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0275_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0275_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0275_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0275_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0275_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0275_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 57.2473, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261099, + "min": 13.464, + "max": 81.7935, + "mean": 43.3438, + "median": 41.6886, + "p90": 64.3208 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 19, + "major_roads": 4409, + "schools_waterpoints": 11, + "urban_landuse": 974, + "water_surface": 39, + "waterways": 45 + }, + "label_counts": { + "vector_label": 3, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0276_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0276_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..cb17e7396b7aeacee07d3260e79c5fd28363ebb0 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0276_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0276_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.506080450932, + "lat": 13.821177754671421 + }, + "bbox": [ + 100.48292702764198, + 13.798694714523453, + 100.52923387422203, + 13.843660794819389 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0276_exposure_context_packet.png", + "sha256": "ab03b7154c9c7c02bba3315cf9c4df07eae8b5c45f7016325b6a3bb806f6bd2e", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0276_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0276_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0276_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0276_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0276_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0276_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0276_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 57.6465, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 241218, + "min": 9.6695, + "max": 126.9598, + "mean": 50.1867, + "median": 43.7608, + "p90": 89.2106 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 25, + "major_roads": 5449, + "schools_waterpoints": 55, + "urban_landuse": 2743, + "water_surface": 15, + "waterways": 84 + }, + "label_counts": { + "vector_label": 21, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0277_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0277_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..7455ee1d1d05cdbb466fde19b018ff394fcd8758 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0277_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0277_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.6116508704953, + "lat": 13.676987660438051 + }, + "bbox": [ + 100.58851169985569, + 13.654504620290083, + 100.6347900411349, + 13.69947070058602 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0277_exposure_context_packet.png", + "sha256": "4fc6c54b94e85da4aec42b24758365b3e2cead51174d48c9a8cec44afd06001c", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0277_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0277_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0277_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0277_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0277_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0277_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0277_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 60.2978, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 259242, + "min": 22.0695, + "max": 110.617, + "mean": 61.1728, + "median": 61.0175, + "p90": 82.5212 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 8, + "major_roads": 3770, + "schools_waterpoints": 15, + "urban_landuse": 2948, + "water_surface": 53, + "waterways": 45 + }, + "label_counts": { + "vector_label": 3, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0280_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0280_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..282938ebdfab1edb05124a5fd68c44a6a8949357 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0280_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0280_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.74651130385004, + "lat": 13.683125890015127 + }, + "bbox": [ + 100.72337152981304, + 13.660642849867159, + 100.76965107788705, + 13.705608930163095 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0280_exposure_context_packet.png", + "sha256": "792fe502aa77fe7982e94df183bac775f80aa98c83a2f6c1cba3370f0600f6dd", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0280_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0280_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0280_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0280_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0280_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0280_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0280_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 74.2063, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261479, + "min": 0.911, + "max": 15.9885, + "mean": 4.0328, + "median": 2.9559, + "p90": 7.9528 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 940, + "schools_waterpoints": 7, + "urban_landuse": 203, + "water_surface": 109, + "waterways": 33 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0281_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0281_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..47eac6a90496042bf16612cf8137221927379d97 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0281_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0281_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.50548253553598, + "lat": 13.750271894945138 + }, + "bbox": [ + 100.48233614153696, + 13.72778885479717, + 100.52862892953499, + 13.772754935093106 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0281_exposure_context_packet.png", + "sha256": "8809620dbdf1489dd40a27df9c9ae7c8f10fee11da7a2a7c833ce71390005d5c", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0281_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0281_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0281_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0281_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0281_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0281_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0281_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 59.1435, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 242759, + "min": 24.5446, + "max": 158.257, + "mean": 87.7742, + "median": 86.4739, + "p90": 118.4227 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 130, + "major_roads": 6186, + "schools_waterpoints": 201, + "urban_landuse": 23592, + "water_surface": 102, + "waterways": 193 + }, + "label_counts": { + "vector_label": 23, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0282_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0282_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..b2b1c5a5f65675b50415adaeb67fe56b22770cef --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0282_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0282_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.5173719915582, + "lat": 13.716143386046475 + }, + "bbox": [ + 100.49422896675313, + 13.693660345898508, + 100.54051501636329, + 13.738626426194443 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0282_exposure_context_packet.png", + "sha256": "6b4e347d58bd9a24693e2c9db34c64fd6c0bfb08f83408c6c69e9e5794c502d5", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0282_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0282_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0282_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0282_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0282_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0282_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0282_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 56.4591, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 245036, + "min": 28.0416, + "max": 162.5245, + "mean": 107.2669, + "median": 111.2881, + "p90": 134.972 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 145, + "major_roads": 7057, + "schools_waterpoints": 146, + "urban_landuse": 26305, + "water_surface": 55, + "waterways": 159 + }, + "label_counts": { + "vector_label": 13, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0283_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0283_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..abb207dfcf8992a1b2c84cde4493de5f13129742 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0283_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0283_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.36247340244319, + "lat": 13.621140517609366 + }, + "bbox": [ + 100.33933970802309, + 13.598657477461398, + 100.38560709686328, + 13.643623557757333 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0283_exposure_context_packet.png", + "sha256": "753a407161a5985e7d62924276679dd34c6efe3d1df69dbc375b1f4d04f706be", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0283_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0283_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0283_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0283_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0283_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0283_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0283_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 66.4158, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 249742, + "min": 4.7944, + "max": 38.6617, + "mean": 12.0927, + "median": 10.7271, + "p90": 19.7856 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 2833, + "schools_waterpoints": 5, + "urban_landuse": 418, + "water_surface": 12, + "waterways": 14 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0284_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0284_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..31482c6200a9da3034d415e321de7eab2d1eca5e --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0284_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0284_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.51182590888418, + "lat": 13.796818996703717 + }, + "bbox": [ + 100.48867490489238, + 13.774335956555749, + 100.53497691287598, + 13.819302036851685 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0284_exposure_context_packet.png", + "sha256": "2c0761b9f161cb7e1e0f805688c29415b8f3ef66f2a682983c412eee741a00f5", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0284_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0284_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0284_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0284_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0284_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0284_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0284_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 57.0409, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 240311, + "min": 14.5087, + "max": 162.6429, + "mean": 75.8424, + "median": 75.5839, + "p90": 118.7969 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 14, + "major_roads": 5436, + "schools_waterpoints": 67, + "urban_landuse": 5721, + "water_surface": 138, + "waterways": 130 + }, + "label_counts": { + "vector_label": 5, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0286_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0286_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..06eaea92f92f50befdef79ae77ddd3e1e20867f4 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0286_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0286_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.42781015631881, + "lat": 13.719346965838861 + }, + "bbox": [ + 100.40466681564466, + 13.696863925690893, + 100.45095349699297, + 13.741830005986829 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0286_exposure_context_packet.png", + "sha256": "e2ac15024ef0fb5c24f9eeb08c6934ecc5661241d295f56193c6f1f93b9aad9f", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0286_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0286_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0286_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0286_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0286_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0286_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0286_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 59.9923, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261802, + "min": 16.6922, + "max": 113.2335, + "mean": 52.0849, + "median": 48.2411, + "p90": 82.1646 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 16, + "major_roads": 4622, + "schools_waterpoints": 23, + "urban_landuse": 3459, + "water_surface": 12, + "waterways": 258 + }, + "label_counts": { + "vector_label": 10, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0287_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0287_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..be917a74a804f2b7ceab627346effd7e1f090a8a --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0287_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0287_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.66545057485023, + "lat": 13.781771959470834 + }, + "bbox": [ + 100.64230106297869, + 13.759288919322866, + 100.68860008672176, + 13.804254999618802 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0287_exposure_context_packet.png", + "sha256": "ed3049b43b91775da402b557ba5f6049e0371c3ed20032f530d6b9fc30940a7e", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0287_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0287_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0287_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0287_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0287_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0287_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0287_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 58.6175, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 260909, + "min": 13.6694, + "max": 136.8932, + "mean": 50.1391, + "median": 40.905, + "p90": 101.0814 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 16, + "major_roads": 3869, + "schools_waterpoints": 21, + "urban_landuse": 9195, + "water_surface": 51, + "waterways": 62 + }, + "label_counts": { + "vector_label": 2, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0288_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0288_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..feb4e70daef96090a565c9455720e475cf43d128 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0288_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0288_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.83052806921076, + "lat": 13.65869464220697 + }, + "bbox": [ + 100.80739069504146, + 13.636211602059003, + 100.85366544338005, + 13.681177682354939 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0288_exposure_context_packet.png", + "sha256": "c5358aad7e35a273de3b54ab72e3bc98096b1254caef136ecec81682bd7911b2", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0288_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0288_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0288_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0288_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0288_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0288_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0288_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 46.9841, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 254373, + "min": 0.9928, + "max": 3.806, + "mean": 1.6465, + "median": 1.4529, + "p90": 2.3643 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 834, + "schools_waterpoints": 2, + "urban_landuse": 9, + "water_surface": 1, + "waterways": 26 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0289_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0289_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..4511e89cf73b36afd5c3967b096ca35719adf581 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0289_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0289_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.51709853470507, + "lat": 13.69413283495279 + }, + "bbox": [ + 100.49395767792448, + 13.671649794804821, + 100.54023939148566, + 13.716615875100757 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0289_exposure_context_packet.png", + "sha256": "4a9e64b9ca3155697500ef11696722034886f3f12a9fcaa34c927450ecae7773", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0289_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0289_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0289_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0289_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0289_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0289_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0289_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 57.5528, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 229454, + "min": 22.4143, + "max": 159.8888, + "mean": 99.3682, + "median": 103.6972, + "p90": 127.6515 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 29, + "major_roads": 5435, + "schools_waterpoints": 63, + "urban_landuse": 23882, + "water_surface": 23, + "waterways": 186 + }, + "label_counts": { + "vector_label": 8, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0290_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0290_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..c57a341dd823f225392ee4d43c30fb8228bdf314 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0290_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0290_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.62563591897938, + "lat": 13.748660794077454 + }, + "bbox": [ + 100.6024896842363, + 13.726177753929486, + 100.64878215372246, + 13.771143834225422 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0290_exposure_context_packet.png", + "sha256": "33cd154ee7507df598b9e237d6f7095cda8ea27718b9e702f3c248b2c3c14f29", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0290_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0290_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0290_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0290_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0290_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0290_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0290_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 58.2214, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 262144, + "min": 23.3622, + "max": 143.8066, + "mean": 78.8152, + "median": 77.8018, + "p90": 111.8338 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 11, + "major_roads": 4216, + "schools_waterpoints": 29, + "urban_landuse": 1776, + "water_surface": 17, + "waterways": 58 + }, + "label_counts": { + "vector_label": 2, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0291_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0291_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..c1be9c68a6e10625e3576c41fec0989ee8ec876a --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0291_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0291_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.54742910246586, + "lat": 13.72213246078402 + }, + "bbox": [ + 100.52428548707948, + 13.699649420636051, + 100.57057271785223, + 13.744615500931987 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0291_exposure_context_packet.png", + "sha256": "548baefafdfeaa45c937e4817fda911095a319c656bef85427ba963d9a42d64b", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0291_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0291_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0291_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0291_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0291_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0291_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0291_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 60.2305, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 249817, + "min": 11.3591, + "max": 162.568, + "mean": 89.1321, + "median": 88.988, + "p90": 129.8156 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 192, + "major_roads": 7107, + "schools_waterpoints": 175, + "urban_landuse": 25618, + "water_surface": 142, + "waterways": 137 + }, + "label_counts": { + "vector_label": 7, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0292_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0292_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..d01c77e0364800cd50b1eb2cebf8a65815940320 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0292_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0292_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.52853559745539, + "lat": 13.717794134287814 + }, + "bbox": [ + 100.50539240989865, + 13.695311094139846, + 100.55167878501213, + 13.740277174435782 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0292_exposure_context_packet.png", + "sha256": "25858c8c0452c258360694b6e198cdc244de8420a3223747610524a8eaac9e8f", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0292_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0292_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0292_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0292_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0292_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0292_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0292_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 58.8721, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 250163, + "min": 27.9056, + "max": 162.5658, + "mean": 100.6685, + "median": 102.7012, + "p90": 135.2259 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 183, + "major_roads": 7612, + "schools_waterpoints": 182, + "urban_landuse": 31698, + "water_surface": 123, + "waterways": 159 + }, + "label_counts": { + "vector_label": 14, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0293_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0293_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..4d05fafeefb97acededab12df4c7e0818d355246 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0293_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0293_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.52416459006375, + "lat": 13.745027741609265 + }, + "bbox": [ + 100.50101871436958, + 13.722544701461297, + 100.54731046575792, + 13.767510781757233 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0293_exposure_context_packet.png", + "sha256": "f288ccdd7288065eeb4e85885881df77af08250d094f79fd7baa30ec8f6c1f3f", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0293_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0293_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0293_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0293_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0293_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0293_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0293_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 59.2078, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 255828, + "min": 24.4837, + "max": 157.4123, + "mean": 86.5945, + "median": 86.3915, + "p90": 115.4388 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 199, + "major_roads": 7482, + "schools_waterpoints": 212, + "urban_landuse": 22079, + "water_surface": 154, + "waterways": 145 + }, + "label_counts": { + "vector_label": 24, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0295_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0295_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..131665cce7aa51a24daaaeb1e0b600ac1ab337cf --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0295_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0295_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.60767071544767, + "lat": 13.59821654065586 + }, + "bbox": [ + 100.5845392617794, + 13.575733500507893, + 100.63080216911594, + 13.620699580803828 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0295_exposure_context_packet.png", + "sha256": "552c897a6f80658ab05c3de60b709b78178f28a2a9ffd890c1e50d7af2aaf47b", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0295_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0295_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0295_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0295_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0295_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0295_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0295_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 58.7151, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 232964, + "min": 9.8807, + "max": 62.7899, + "mean": 34.7214, + "median": 33.9248, + "p90": 50.1956 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 11, + "major_roads": 3778, + "schools_waterpoints": 23, + "urban_landuse": 16240, + "water_surface": 41, + "waterways": 50 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0296_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0296_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..42398d0c57b2c2874cf8d7230f08809349d0d6f9 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0296_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0296_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.52177924159997, + "lat": 13.725257041830055 + }, + "bbox": [ + 100.49863531798704, + 13.702774001682087, + 100.54492316521291, + 13.747740081978023 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0296_exposure_context_packet.png", + "sha256": "b74a87e86c72a13b164dd19ef09ad7ab585fbaa6a9ac5721a1cacbb60ec44d22", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0296_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0296_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0296_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0296_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0296_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0296_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0296_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 58.7656, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 246752, + "min": 27.9646, + "max": 162.5933, + "mean": 96.5865, + "median": 91.5035, + "p90": 134.8748 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 186, + "major_roads": 7086, + "schools_waterpoints": 193, + "urban_landuse": 25839, + "water_surface": 125, + "waterways": 155 + }, + "label_counts": { + "vector_label": 14, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0297_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0297_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..38822aa8f75d3f74db879fa2dbafa996432260dd --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0297_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0297_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.53219425978924, + "lat": 13.724978167744009 + }, + "bbox": [ + 100.50905036368917, + 13.702495127596041, + 100.5553381558893, + 13.747461207891977 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0297_exposure_context_packet.png", + "sha256": "19da7c5095952fe7b89caa53ff0b2d3d160aa87f5b0db42072be54df935e8a79", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0297_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0297_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0297_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0297_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0297_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0297_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0297_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 59.9055, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 252860, + "min": 20.1172, + "max": 162.5825, + "mean": 94.4928, + "median": 89.3749, + "p90": 135.0715 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 228, + "major_roads": 7848, + "schools_waterpoints": 217, + "urban_landuse": 29689, + "water_surface": 157, + "waterways": 148 + }, + "label_counts": { + "vector_label": 15, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0298_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0298_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..2373faa906be6c9a1aba30bcd1cbf0b91369dfcd --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0298_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0298_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.59829214300161, + "lat": 13.734825159594065 + }, + "bbox": [ + 100.57514727505556, + 13.712342119446097, + 100.62143701094767, + 13.757308199742033 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0298_exposure_context_packet.png", + "sha256": "2353f633117e83aad913158397a92f737e89b0750aed0a46a98f872bd56b19aa", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0298_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0298_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0298_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0298_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0298_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0298_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0298_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 57.0277, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 262144, + "min": 31.5016, + "max": 144.1659, + "mean": 76.6207, + "median": 79.0628, + "p90": 97.7983 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 55, + "major_roads": 4473, + "schools_waterpoints": 53, + "urban_landuse": 5571, + "water_surface": 15, + "waterways": 64 + }, + "label_counts": { + "vector_label": 5, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0299_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0299_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..c0bae6eec034292c263f05854cb3aa27eef0fabb --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0299_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0299_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.54417226687823, + "lat": 13.866856109822454 + }, + "bbox": [ + 100.52101429419024, + 13.844373069674486, + 100.56733023956623, + 13.889339149970422 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0299_exposure_context_packet.png", + "sha256": "ce7c8ce8f556b2723fda8fef5fce60a049b7bd84ecd4740a2455eafb78924b54", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0299_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0299_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0299_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0299_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0299_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0299_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0299_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 56.2702, + "repair_attempts": 1 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 260938, + "min": 16.0333, + "max": 84.7561, + "mean": 49.9409, + "median": 50.4015, + "p90": 68.356 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 15, + "major_roads": 4133, + "schools_waterpoints": 16, + "urban_landuse": 1107, + "water_surface": 174, + "waterways": 62 + }, + "label_counts": { + "vector_label": 11, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0300_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0300_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..e0a397c2b43bd221a0df4f7e15c4b2813a2d7549 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0300_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0300_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.57275431328107, + "lat": 13.728660424218182 + }, + "bbox": [ + 100.54961005385134, + 13.706177384070214, + 100.5958985727108, + 13.75114346436615 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0300_exposure_context_packet.png", + "sha256": "e3ba3f0823a8a3c40501f498518248384b994f925381c8850515bf9edd468d98", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0300_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0300_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0300_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0300_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0300_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0300_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0300_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 58.1524, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 257801, + "min": 31.629, + "max": 146.3351, + "mean": 85.1557, + "median": 87.4947, + "p90": 98.3232 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 132, + "major_roads": 5739, + "schools_waterpoints": 126, + "urban_landuse": 14357, + "water_surface": 42, + "waterways": 83 + }, + "label_counts": { + "vector_label": 11, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0301_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0301_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..7c27338c3fb177e0af620b7698e0b99f49785f3e --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0301_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0301_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.53374304922825, + "lat": 13.6619595466472 + }, + "bbox": [ + 100.51060535462157, + 13.639476506499232, + 100.55688074383492, + 13.684442586795168 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0301_exposure_context_packet.png", + "sha256": "31125987e34c00b849c5f644db61646502d169e7e80975d5bae73be1ab210404", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0301_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0301_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0301_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0301_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0301_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0301_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0301_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 59.1941, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 214387, + "min": 13.0435, + "max": 110.3743, + "mean": 49.793, + "median": 48.5785, + "p90": 76.9904 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 11, + "major_roads": 3539, + "schools_waterpoints": 26, + "urban_landuse": 8704, + "water_surface": 77, + "waterways": 165 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0302_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0302_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..9c88ccff74792a977e53a5067d0edbd4602103eb --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0302_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0302_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.57117736239265, + "lat": 13.727095768882892 + }, + "bbox": [ + 100.54803325736114, + 13.704612728734924, + 100.59432146742415, + 13.74957880903086 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0302_exposure_context_packet.png", + "sha256": "f363bc5e25492f346bbdd29a4de4196bcfd79abfb50d174e7795f7ede29c1f03", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0302_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0302_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0302_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0302_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0302_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0302_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0302_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 58.4591, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 254210, + "min": 28.8818, + "max": 146.1288, + "mean": 85.6533, + "median": 87.8044, + "p90": 98.796 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 139, + "major_roads": 5731, + "schools_waterpoints": 127, + "urban_landuse": 15388, + "water_surface": 40, + "waterways": 79 + }, + "label_counts": { + "vector_label": 7, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0303_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0303_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..2f7a4034826fbe6a15a3f3422debd621e3e855d4 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0303_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0303_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.47209632054502, + "lat": 13.809937867451264 + }, + "bbox": [ + 100.44894401417712, + 13.787454827303296, + 100.49524862691293, + 13.832420907599232 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0303_exposure_context_packet.png", + "sha256": "20c93d0155a61eae8bbaddcaf2115cb88191d7ac2422f67c9f30acbd01582802", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0303_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0303_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0303_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0303_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0303_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0303_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0303_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 60.7211, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 259251, + "min": 6.0355, + "max": 158.4377, + "mean": 24.9957, + "median": 18.2355, + "p90": 42.7305 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 11, + "major_roads": 5053, + "schools_waterpoints": 34, + "urban_landuse": 3141, + "water_surface": 11, + "waterways": 83 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0305_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0305_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..cf3616c5cd57157334d538dceec7e2cca2c2d77d --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0305_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0305_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.56710756719943, + "lat": 13.82509653381557 + }, + "bbox": [ + 100.54395375426043, + 13.802613493667602, + 100.59026138013843, + 13.847579573963538 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0305_exposure_context_packet.png", + "sha256": "6a93eebb43f6148db49ffc8b354e0dc201d50b4a6664f621ff1bea43a40eeb17", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0305_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0305_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0305_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0305_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0305_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0305_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0305_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 56.8864, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 262144, + "min": 27.0919, + "max": 126.7777, + "mean": 66.3386, + "median": 66.9961, + "p90": 85.705 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 37, + "major_roads": 4421, + "schools_waterpoints": 43, + "urban_landuse": 3994, + "water_surface": 93, + "waterways": 56 + }, + "label_counts": { + "vector_label": 4, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0306_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0306_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..8fe268e90470a56237860b8b18d4d5a087821d0e --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0306_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0306_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.56989711464338, + "lat": 13.844837344970452 + }, + "bbox": [ + 100.54674133700473, + 13.822354304822484, + 100.59305289228203, + 13.86732038511842 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0306_exposure_context_packet.png", + "sha256": "dbc820b537aff2c147a2f98c099c936c902f1d8d431da097a3f422a48b7941ed", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0306_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0306_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0306_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0306_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0306_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0306_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0306_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 56.8433, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 262144, + "min": 24.2173, + "max": 91.7166, + "mean": 60.9237, + "median": 62.3373, + "p90": 77.6063 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 29, + "major_roads": 4428, + "schools_waterpoints": 38, + "urban_landuse": 3543, + "water_surface": 112, + "waterways": 93 + }, + "label_counts": { + "vector_label": 21, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0307_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0307_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..ece5aadd9afcb5b3b154ebaed4cb42f6170a4948 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0307_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0307_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.56175050034838, + "lat": 13.726541169434185 + }, + "bbox": [ + 100.53860645003941, + 13.704058129286217, + 100.58489455065735, + 13.749024209582153 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0307_exposure_context_packet.png", + "sha256": "938b1a18c64576674813298347f631aab80885a3684cd3b905667466d9d422a9", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0307_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0307_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0307_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0307_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0307_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0307_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0307_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 59.129, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 252344, + "min": 19.4161, + "max": 146.2347, + "mean": 85.3832, + "median": 87.7135, + "p90": 101.2608 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 157, + "major_roads": 6408, + "schools_waterpoints": 153, + "urban_landuse": 18537, + "water_surface": 96, + "waterways": 94 + }, + "label_counts": { + "vector_label": 7, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0308_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0308_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..5f333a8866445dbab988c950e03836bb25c00991 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0308_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0308_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.60909155643725, + "lat": 13.726887112703636 + }, + "bbox": [ + 100.5859474719942, + 13.704404072555668, + 100.6322356408803, + 13.749370152851604 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0308_exposure_context_packet.png", + "sha256": "f8c39043ac5039cd992cce6d98e32f035a8198747d72e75f71a7dffe11ef5c1c", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0308_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0308_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0308_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0308_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0308_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0308_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0308_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 56.2535, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 262144, + "min": 29.8482, + "max": 119.0907, + "mean": 71.3539, + "median": 73.2462, + "p90": 92.1699 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 29, + "major_roads": 4492, + "schools_waterpoints": 35, + "urban_landuse": 2702, + "water_surface": 10, + "waterways": 69 + }, + "label_counts": { + "vector_label": 4, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0309_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0309_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..0e28ce7e5e34c5c35a4f7acafd3920bb33fa251d --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0309_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0309_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.411821079363, + "lat": 13.914299985637209 + }, + "bbox": [ + 100.38865836395478, + 13.891816945489241, + 100.43498379477121, + 13.936783025785177 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0309_exposure_context_packet.png", + "sha256": "6f08cf734fce4b9fe1fa2aeaaa32afb7158ae331e0a8c920fed6946b37f52d52", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0309_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0309_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0309_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0309_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0309_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0309_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0309_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 61.8363, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 260776, + "min": 4.8627, + "max": 33.5748, + "mean": 15.0763, + "median": 14.857, + "p90": 21.7874 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 3558, + "schools_waterpoints": 7, + "urban_landuse": 661, + "water_surface": 5, + "waterways": 26 + }, + "label_counts": { + "vector_label": 3, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0310_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0310_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..44e91cf333dd7afd88b995347accafa4329194d1 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0310_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0310_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.44143546716714, + "lat": 13.767873097851549 + }, + "bbox": [ + 100.41828733196927, + 13.745390057703581, + 100.46458360236501, + 13.790356137999517 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0310_exposure_context_packet.png", + "sha256": "f816cb4b0ba13914db02e9f3e43b861c48295d4dacd0a376e2cfcbcb60867cb5", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0310_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0310_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0310_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0310_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0310_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0310_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0310_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 59.1616, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261441, + "min": 10.1365, + "max": 96.4993, + "mean": 31.56, + "median": 26.6356, + "p90": 53.7568 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 2, + "major_roads": 4252, + "schools_waterpoints": 19, + "urban_landuse": 3950, + "water_surface": 50, + "waterways": 120 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0311_exposure_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0311_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..bb009407c1a4b016f5b0d766b962ca734c0618bb --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0311_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0311_exposure_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.85801160280188, + "lat": 13.5784221622505 + }, + "bbox": [ + 100.83488208064853, + 13.555939122102533, + 100.88114112495524, + 13.600905202398469 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0311_exposure_context_packet.png", + "sha256": "6cffcad4c6f7c0ab1564bd1969e435713d01c396296581995bf97dd469c4b111", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0311_exposure_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0311_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0311_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0311_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0311_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0311_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0311_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 60.0534, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 260767, + "min": 1.5412, + "max": 27.5203, + "mean": 5.8359, + "median": 4.8468, + "p90": 10.762 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 2, + "major_roads": 1559, + "schools_waterpoints": 3, + "urban_landuse": 1386, + "water_surface": 1, + "waterways": 27 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0313_random_ecological_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0313_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..92e9cb885fcbe451bf958e2d003dfc13b856c5da --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0313_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0313_random_ecological", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.47501499040729, + "lat": 13.65571379884993 + }, + "bbox": [ + 100.45187790872255, + 13.633230758701963, + 100.49815207209203, + 13.678196838997899 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0313_random_ecological_packet.png", + "sha256": "37964d1d1099d05da2193b26b4ecdcd37cc2d1ce973e67259939b618f3190918", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0313_random_ecological", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0313_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0313_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0313_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0313_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0313_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0313_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 63.3259, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261460, + "min": 8.5612, + "max": 90.2795, + "mean": 32.7335, + "median": 28.0185, + "p90": 57.7895 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 6, + "major_roads": 4710, + "schools_waterpoints": 9, + "urban_landuse": 871, + "water_surface": 36, + "waterways": 283 + }, + "label_counts": { + "vector_label": 2, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0314_random_ecological_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0314_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..5abb3b183985e27ec19792ce94b7ed68ba78b328 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0314_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0314_random_ecological", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.74793587966488, + "lat": 13.47798325660653 + }, + "bbox": [ + 100.7248161107561, + 13.455500216458562, + 100.77105564857366, + 13.500466296754498 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0314_random_ecological_packet.png", + "sha256": "88db67a701c1eb9740059a3d40c66caa79cd384b4d0435a7672de4237af12223", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0314_random_ecological", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0314_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0314_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0314_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0314_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0314_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0314_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 24.8352, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": -3908.136, + "max": 0.0, + "mean": -845.5458, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 15422, + "min": 2.3092, + "max": 6.693, + "mean": 4.2131, + "median": 4.2998, + "p90": 5.7566 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 52, + "schools_waterpoints": 0, + "urban_landuse": 5, + "water_surface": 0, + "waterways": 2 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0316_random_ecological_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0316_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..0184a7b2f8e4dcfe5b44c303885fd39fa4ebbf69 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0316_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0316_random_ecological", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.45130390383575, + "lat": 13.686993620796418 + }, + "bbox": [ + 100.4281637494423, + 13.66451058064845, + 100.4744440582292, + 13.709476660944386 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0316_random_ecological_packet.png", + "sha256": "ffbdc73f9fe543487cd12b32e035fcf57f6cd40ecb581adce1ce9d8160d63012", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0316_random_ecological", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0316_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0316_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0316_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0316_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0316_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0316_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 60.0956, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261384, + "min": 16.6729, + "max": 93.7226, + "mean": 51.3869, + "median": 51.5012, + "p90": 72.0072 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 11, + "major_roads": 4535, + "schools_waterpoints": 17, + "urban_landuse": 667, + "water_surface": 3, + "waterways": 148 + }, + "label_counts": { + "vector_label": 4, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0317_random_ecological_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0317_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..0a9463d93ebec30d05aa87e7e4a590bf74408d7a --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0317_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0317_random_ecological", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.66694766651023, + "lat": 13.813937921895834 + }, + "bbox": [ + 100.64379496276621, + 13.791454881747866, + 100.69010037025424, + 13.836420962043801 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0317_random_ecological_packet.png", + "sha256": "007e87d03a1e246e7e82862f36a04bbb1e3db115f7e00a8388d069b362756e19", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0317_random_ecological", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0317_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0317_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0317_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0317_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0317_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0317_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 58.9165, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 260386, + "min": 13.7054, + "max": 69.0491, + "mean": 34.918, + "median": 31.988, + "p90": 52.0132 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 12, + "major_roads": 4186, + "schools_waterpoints": 11, + "urban_landuse": 5763, + "water_surface": 54, + "waterways": 53 + }, + "label_counts": { + "vector_label": 2, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0319_random_ecological_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0319_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..9c1b9e652d4bc5057c305be038ee3b6eb69029c8 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0319_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0319_random_ecological", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.83408377758127, + "lat": 13.714502495103472 + }, + "bbox": [ + 100.81094091453467, + 13.692019454955505, + 100.85722664062787, + 13.73698553525144 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0319_random_ecological_packet.png", + "sha256": "b32fd7a16e96c509b07facac6b0f4ad07205e69e4d964eda485f3bbb0f828fb5", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0319_random_ecological", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0319_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0319_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0319_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0319_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0319_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0319_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 59.9901, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261460, + "min": 1.3513, + "max": 17.7898, + "mean": 5.1185, + "median": 3.9387, + "p90": 9.9647 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 1399, + "schools_waterpoints": 2, + "urban_landuse": 179, + "water_surface": 82, + "waterways": 48 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0320_random_ecological_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0320_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..5acd6558d2e5d177a8041ba1857f940e32c46ac5 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0320_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0320_random_ecological", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.4313967676812, + "lat": 13.56709646476868 + }, + "bbox": [ + 100.40826834929109, + 13.544613424620712, + 100.45452518607132, + 13.589579504916648 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0320_random_ecological_packet.png", + "sha256": "cf5931d0eb0aa80a1ca9866b6ee469f8b545ae1b7b29c3df4a33d6c9af6d1282", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0320_random_ecological", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0320_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0320_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0320_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0320_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0320_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0320_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 50.6287, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 34991, + "min": 1.2413, + "max": 12.0472, + "mean": 5.5423, + "median": 5.9131, + "p90": 8.0347 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 725, + "schools_waterpoints": 4, + "urban_landuse": 574, + "water_surface": 638, + "waterways": 77 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0321_random_ecological_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0321_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..4be3d736ccc2386e801188338e43cdd93a22d4f8 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0321_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0321_random_ecological", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.63256160053986, + "lat": 13.642257013471088 + }, + "bbox": [ + 100.60942583838242, + 13.61977397332312, + 100.6556973626973, + 13.664740053619056 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0321_random_ecological_packet.png", + "sha256": "c8d3e4020e99f749f836d3bb007b7d35a869df22809213cc1c27bc8e88b53927", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0321_random_ecological", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0321_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0321_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0321_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0321_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0321_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0321_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 62.3136, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261802, + "min": 4.1019, + "max": 75.2352, + "mean": 30.7847, + "median": 31.7849, + "p90": 52.3538 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 10, + "major_roads": 4415, + "schools_waterpoints": 14, + "urban_landuse": 19365, + "water_surface": 52, + "waterways": 21 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0323_random_ecological_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0323_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..753787f6728839654a1f631988cd721e3b56efa2 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0323_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0323_random_ecological", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.9050118215771, + "lat": 13.945463578995074 + }, + "bbox": [ + 100.88184598120279, + 13.922980538847106, + 100.92817766195142, + 13.967946619143042 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0323_random_ecological_packet.png", + "sha256": "2a02f30b8b40c805bc807ba37be0ff741664c0af9ba589e518ad09af28d94ca6", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0323_random_ecological", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0323_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0323_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0323_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0323_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0323_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0323_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 50.6382, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 189155, + "min": 0.6983, + "max": 5.0152, + "mean": 1.5161, + "median": 1.3576, + "p90": 2.5654 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 296, + "schools_waterpoints": 0, + "urban_landuse": 17, + "water_surface": 20, + "waterways": 4 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0325_random_ecological_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0325_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..1887ecc6fd67991eddd5c8333431017961d25d04 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0325_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0325_random_ecological", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.85897938759985, + "lat": 13.640276589776256 + }, + "bbox": [ + 100.83584381951569, + 13.617793549628288, + 100.882114955684, + 13.662759629924224 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0325_random_ecological_packet.png", + "sha256": "94223920381a32ebed55ea7ee3a2d7aa0427e559d080ecc42b889ff3e83fc15c", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0325_random_ecological", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0325_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0325_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0325_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0325_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0325_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0325_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 51.8381, + "repair_attempts": 1 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 258182, + "min": 1.108, + "max": 5.7703, + "mean": 2.4688, + "median": 2.3381, + "p90": 3.5774 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 829, + "schools_waterpoints": 2, + "urban_landuse": 13, + "water_surface": 1, + "waterways": 39 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0326_random_ecological_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0326_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..24324c2fca4971296181910631ccbde12936ea67 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0326_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0326_random_ecological", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.67173248502046, + "lat": 13.546692023281196 + }, + "bbox": [ + 100.64860605263033, + 13.524208983133228, + 100.69485891741058, + 13.569175063429164 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0326_random_ecological_packet.png", + "sha256": "4e025698a514d4d6cf2f22c295c1cdc7796189a36d73b848f27a36a0881f0467", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0326_random_ecological", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0326_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0326_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0326_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0326_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0326_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0326_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 70.1804, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": -149.2973, + "max": 0.0, + "mean": -1.271, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 260852, + "min": 1.2889, + "max": 40.498, + "mean": 15.7783, + "median": 14.0954, + "p90": 31.6545 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 3320, + "schools_waterpoints": 2, + "urban_landuse": 1302, + "water_surface": 16, + "waterways": 76 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0327_random_ecological_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0327_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..7a6a504be77ee2b785a281435021aa2e5278ca00 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0327_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0327_random_ecological", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.85258464782392, + "lat": 13.665665619437881 + }, + "bbox": [ + 100.82944658937915, + 13.643182579289913, + 100.87572270626869, + 13.688148659585849 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0327_random_ecological_packet.png", + "sha256": "5643255b6f638323c8985b8bea657b87ca66e7d1cb57fe64397235a44af0312b", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0327_random_ecological", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0327_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0327_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0327_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0327_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0327_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0327_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 45.507, + "repair_attempts": 1 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 256183, + "min": 0.9862, + "max": 4.7349, + "mean": 2.0022, + "median": 1.8659, + "p90": 3.0146 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 719, + "schools_waterpoints": 2, + "urban_landuse": 8, + "water_surface": 0, + "waterways": 26 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0329_random_ecological_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0329_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..c2778556e6f26cd0191f58e53cf9fd81cafa1521 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0329_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0329_random_ecological", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.91675262958316, + "lat": 13.767615675635126 + }, + "bbox": [ + 100.8936045198684, + 13.745132635487158, + 100.93990073929791, + 13.790098715783094 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0329_random_ecological_packet.png", + "sha256": "e5bfa5aeec3f1798e90cb1cbb2e2f6251881dbfa5c9d6d6ea0ecdeec7966eee9", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0329_random_ecological", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0329_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0329_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0329_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0329_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0329_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0329_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 56.4797, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 253328, + "min": 0.9445, + "max": 3.8219, + "mean": 1.7806, + "median": 1.6267, + "p90": 2.6923 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 579, + "schools_waterpoints": 0, + "urban_landuse": 49, + "water_surface": 16, + "waterways": 19 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0330_random_ecological_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0330_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..c67683ed8e1790cd6c479c1e92b8b76080af64d1 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0330_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0330_random_ecological", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.64254716156773, + "lat": 13.825772111087124 + }, + "bbox": [ + 100.619393281443, + 13.803289070939156, + 100.66570104169247, + 13.848255151235092 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0330_random_ecological_packet.png", + "sha256": "dcce951aeb532becb1f7260419327541f7e4ba6828bc4f5795c2010dfbd5a6a1", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0330_random_ecological", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0330_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0330_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0330_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0330_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0330_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0330_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 59.2022, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 262144, + "min": 18.6152, + "max": 71.5052, + "mean": 38.7286, + "median": 36.9403, + "p90": 53.9813 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 19, + "major_roads": 4672, + "schools_waterpoints": 24, + "urban_landuse": 1325, + "water_surface": 33, + "waterways": 76 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0332_random_ecological_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0332_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..99a246e33ff912f43a634e98bd00e4530fd15223 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0332_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0332_random_ecological", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.42023768247188, + "lat": 13.818154539604254 + }, + "bbox": [ + 100.39708455970084, + 13.795671499456287, + 100.44339080524291, + 13.840637579752222 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0332_random_ecological_packet.png", + "sha256": "9e40dd72e7787f4b0ef4ea473cf2be022435fe4b04ea684522924715660e7b8a", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0332_random_ecological", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0332_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0332_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0332_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0332_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0332_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0332_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 62.9936, + "repair_attempts": 1 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261270, + "min": 4.7143, + "max": 43.132, + "mean": 11.0557, + "median": 9.4731, + "p90": 17.2092 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 4182, + "schools_waterpoints": 13, + "urban_landuse": 1596, + "water_surface": 11, + "waterways": 40 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0333_random_ecological_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0333_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..b02a0792c5fe39f962768cd3df576e28ac7f309a --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0333_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0333_random_ecological", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.7100201972696, + "lat": 13.699278298325309 + }, + "bbox": [ + 100.68687883400656, + 13.676795258177341, + 100.73316156053264, + 13.721761338473277 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0333_random_ecological_packet.png", + "sha256": "97671b8e128c7091cc7ab8916c0053b5a91d46c19192b6a430834ee93da4da66", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0333_random_ecological", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0333_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0333_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0333_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0333_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0333_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0333_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 66.7687, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 255405, + "min": 3.0895, + "max": 54.1618, + "mean": 15.0767, + "median": 14.0106, + "p90": 27.1217 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 6, + "major_roads": 3935, + "schools_waterpoints": 2, + "urban_landuse": 898, + "water_surface": 162, + "waterways": 40 + }, + "label_counts": { + "vector_label": 2, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0335_random_ecological_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0335_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..cc8953bdcd95604c6c83c18d8bf5031d67630334 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0335_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0335_random_ecological", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.49660671357351, + "lat": 13.553105106184614 + }, + "bbox": [ + 100.47347965733961, + 13.530622066036646, + 100.51973376980742, + 13.575588146332581 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0335_random_ecological_packet.png", + "sha256": "e5a91f5e8cf7b7f8f2c3284e19451f9a1788e4c281b601667faf1a19f0c4ed2f", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0335_random_ecological", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0335_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0335_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0335_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0335_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0335_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0335_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 45.1793, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 29177, + "min": 1.3151, + "max": 6.1206, + "mean": 3.078, + "median": 2.6634, + "p90": 4.9639 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 305, + "schools_waterpoints": 2, + "urban_landuse": 72, + "water_surface": 3, + "waterways": 33 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0336_random_ecological_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0336_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..41d80f468253cd6d2c1cc0bde8d087d62b188f70 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0336_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0336_random_ecological", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.70369243518005, + "lat": 13.779670394385139 + }, + "bbox": [ + 100.68054313156516, + 13.757187354237171, + 100.72684173879493, + 13.802153434533107 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0336_random_ecological_packet.png", + "sha256": "471878a2e7ed457d0c12a6c4233910069e2e2d41d6a1d87a9583fcda603008db", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0336_random_ecological", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0336_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0336_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0336_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0336_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0336_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0336_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 59.5825, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 260376, + "min": 9.515, + "max": 83.7525, + "mean": 30.0398, + "median": 27.8517, + "p90": 47.3488 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 4444, + "schools_waterpoints": 6, + "urban_landuse": 2835, + "water_surface": 24, + "waterways": 69 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0338_random_ecological_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0338_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..db35a04d8566dc855c5d7077430e993fef6f9b01 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0338_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0338_random_ecological", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.76431156405636, + "lat": 13.720122674981695 + }, + "bbox": [ + 100.74116814688605, + 13.697639634833727, + 100.78745498122666, + 13.742605715129663 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0338_random_ecological_packet.png", + "sha256": "175aeab5826c19df1e8d68158b436653dbc0358101a5dd2320906428ae85f987", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0338_random_ecological", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0338_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0338_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0338_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0338_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0338_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0338_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 63.231, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 259854, + "min": 1.5626, + "max": 50.4931, + "mean": 16.7146, + "median": 17.8714, + "p90": 31.7979 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 4, + "major_roads": 2558, + "schools_waterpoints": 9, + "urban_landuse": 1084, + "water_surface": 115, + "waterways": 109 + }, + "label_counts": { + "vector_label": 4, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0339_random_ecological_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0339_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..fc756a47d893a63272bc71a2607e0a4cfffa6062 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0339_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0339_random_ecological", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.62499942363407, + "lat": 13.682940757044001 + }, + "bbox": [ + 100.60185966780026, + 13.660457716896033, + 100.64813917946788, + 13.705423797191969 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0339_random_ecological_packet.png", + "sha256": "d8327e17ebf35adc4ea4f3153899762927382d7467bda95a363c6fb6856339bf", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0339_random_ecological", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0339_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0339_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0339_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0339_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0339_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0339_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 59.2544, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 262144, + "min": 23.7468, + "max": 107.5352, + "mean": 60.1908, + "median": 60.4274, + "p90": 81.4229 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 11, + "major_roads": 3914, + "schools_waterpoints": 11, + "urban_landuse": 1505, + "water_surface": 30, + "waterways": 54 + }, + "label_counts": { + "vector_label": 3, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0340_random_ecological_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0340_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..8a9afa659a395eda02c32b4c691ec76dc05862fc --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0340_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0340_random_ecological", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.83093753080543, + "lat": 13.588382331744914 + }, + "bbox": [ + 100.80780703713447, + 13.565899291596946, + 100.85406802447639, + 13.610865371892881 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0340_random_ecological_packet.png", + "sha256": "96b306c98dedaa870cf23483e9fb52b707fde492db44fac4e97286d748be9bef", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0340_random_ecological", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0340_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0340_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0340_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0340_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0340_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0340_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 67.0176, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 262144, + "min": 2.2289, + "max": 27.8612, + "mean": 8.6992, + "median": 8.2546, + "p90": 13.9496 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 2, + "major_roads": 2226, + "schools_waterpoints": 0, + "urban_landuse": 1617, + "water_surface": 10, + "waterways": 29 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0341_random_ecological_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0341_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..81b4eb22e1185ffb715e7d82ed608991a74d685c --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0341_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0341_random_ecological", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.33614411606739, + "lat": 13.52801442356714 + }, + "bbox": [ + 100.31301949873098, + 13.505531383419171, + 100.3592687334038, + 13.550497463715107 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0341_random_ecological_packet.png", + "sha256": "bb8fcd2966cbc58de5444b8b20143228ba6e3e09bd16d4db2a7bbdaeb5b884c6", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0341_random_ecological", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0341_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0341_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0341_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0341_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0341_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0341_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 51.7163, + "repair_attempts": 1 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 53348, + "min": 1.3431, + "max": 5.3987, + "mean": 2.5415, + "median": 2.2283, + "p90": 3.9389 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 480, + "schools_waterpoints": 3, + "urban_landuse": 49, + "water_surface": 19, + "waterways": 6 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0342_random_ecological_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0342_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..8606d66fb5d378e646152f21aafbc0c54cb7b148 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0342_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0342_random_ecological", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.36016694399451, + "lat": 13.864818387076264 + }, + "bbox": [ + 100.33700917460806, + 13.842335346928296, + 100.38332471338097, + 13.887301427224232 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0342_random_ecological_packet.png", + "sha256": "5a7da8ce35b2028ab5dcd8fa0d4aaacf538c8e985ac517610f8542f4e02a3e31", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0342_random_ecological", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0342_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0342_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0342_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0342_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0342_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0342_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 53.7622, + "repair_attempts": 1 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 260244, + "min": 1.2747, + "max": 7.1945, + "mean": 2.4991, + "median": 2.1233, + "p90": 3.9725 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 2234, + "schools_waterpoints": 0, + "urban_landuse": 650, + "water_surface": 2, + "waterways": 40 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0343_random_ecological_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0343_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..a13e7c0e1fec75b314491feaf00ce76e2314eff5 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0343_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0343_random_ecological", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.61330263750045, + "lat": 13.932336785133364 + }, + "bbox": [ + 100.59013811436901, + 13.909853744985396, + 100.6364671606319, + 13.954819825281332 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0343_random_ecological_packet.png", + "sha256": "f2e29d3d1469d791a0fabace5435e6d24a41693cbf7978f71dbc2707b4694fd2", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0343_random_ecological", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0343_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0343_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0343_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0343_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0343_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0343_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 60.9303, + "repair_attempts": 1 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 256909, + "min": 7.2377, + "max": 83.2668, + "mean": 43.359, + "median": 42.6593, + "p90": 64.6814 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 5, + "major_roads": 3581, + "schools_waterpoints": 21, + "urban_landuse": 436, + "water_surface": 64, + "waterways": 17 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0345_random_ecological_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0345_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..2cdb71242134d501ba2cd3e9eae040aed192a301 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0345_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0345_random_ecological", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.44349621270624, + "lat": 13.775371318289443 + }, + "bbox": [ + 100.42034733500381, + 13.752888278141475, + 100.46664509040866, + 13.79785435843741 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0345_random_ecological_packet.png", + "sha256": "c98d6080ac1d4e91ef27fdeeaea32dce4b691f4125f75e053f963840923ea6c5", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0345_random_ecological", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0345_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0345_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0345_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0345_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0345_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0345_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 58.9039, + "repair_attempts": 1 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261080, + "min": 10.1604, + "max": 110.4688, + "mean": 33.832, + "median": 28.2144, + "p90": 58.3776 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 2, + "major_roads": 4352, + "schools_waterpoints": 21, + "urban_landuse": 2107, + "water_surface": 35, + "waterways": 106 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0346_random_ecological_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0346_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..0a5b5980195ce55f27515ce9a71735d631154acd --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0346_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0346_random_ecological", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.8010944978785, + "lat": 13.771840550204962 + }, + "bbox": [ + 100.77794596986253, + 13.749357510056994, + 100.82424302589446, + 13.79432359035293 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0346_random_ecological_packet.png", + "sha256": "54d0c29f9e8c73242c6db369e1e25b4a1e893d411a796767a6e68b4703d7a9ba", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0346_random_ecological", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0346_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0346_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0346_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0346_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0346_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0346_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 65.1995, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261820, + "min": 2.5811, + "max": 43.5664, + "mean": 15.2487, + "median": 13.8516, + "p90": 25.2635 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 2139, + "schools_waterpoints": 2, + "urban_landuse": 2020, + "water_surface": 48, + "waterways": 102 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0347_random_ecological_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0347_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..2585988f9e21e3f5b76dd2d2b575e0a22944d748 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0347_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0347_random_ecological", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.62742008371592, + "lat": 13.909647399520944 + }, + "bbox": [ + 100.6042578341911, + 13.887164359372976, + 100.65058233324073, + 13.932130439668912 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0347_random_ecological_packet.png", + "sha256": "a6dd6fc5b68df8b177c916db81e3d2aa2a3f9b37467acd25a4939ff1ab0c0ae2", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0347_random_ecological", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0347_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0347_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0347_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0347_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0347_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0347_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 61.5544, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 257638, + "min": 13.6877, + "max": 90.3349, + "mean": 43.7247, + "median": 41.226, + "p90": 67.8232 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 4, + "major_roads": 3633, + "schools_waterpoints": 6, + "urban_landuse": 885, + "water_surface": 58, + "waterways": 16 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0348_random_ecological_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0348_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..62134d3f03ee43a22fa0e1114a7c52147ab473bc --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0348_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0348_random_ecological", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.88855125745772, + "lat": 13.911605031925712 + }, + "bbox": [ + 100.86538881192767, + 13.889121991777744, + 100.91171370298777, + 13.93408807207368 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0348_random_ecological_packet.png", + "sha256": "f59494a5de97545720cf159d34cc3e142d92ae8672222fb5088da4c1a5a4eedb", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0348_random_ecological", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0348_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0348_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0348_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0348_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0348_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0348_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 54.215, + "repair_attempts": 1 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 262144, + "min": 0.6465, + "max": 5.1815, + "mean": 1.7289, + "median": 1.5235, + "p90": 2.8869 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 682, + "schools_waterpoints": 0, + "urban_landuse": 71, + "water_surface": 54, + "waterways": 33 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0350_random_ecological_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0350_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..c0fabaeeff1b0271947ef2406bde179fa1d39455 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0350_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0350_random_ecological", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.79826816760195, + "lat": 13.658950463200654 + }, + "bbox": [ + 100.77513076832787, + 13.636467423052686, + 100.82140556687602, + 13.681433503348622 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0350_random_ecological_packet.png", + "sha256": "b647c95f4660ec7e2adb65cebdd6bfa214d16a797eff9916a2dc8f2a73a8da3d", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0350_random_ecological", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0350_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0350_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0350_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0350_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0350_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0350_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 55.2698, + "repair_attempts": 1 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 250064, + "min": 0.8864, + "max": 3.5783, + "mean": 1.7493, + "median": 1.582, + "p90": 2.465 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 1587, + "schools_waterpoints": 1, + "urban_landuse": 32, + "water_surface": 0, + "waterways": 31 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0351_random_ecological_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0351_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..e26bac6c3d8f3e81ada2c8273b3919ef9c3ad629 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0351_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0351_random_ecological", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.86027607967709, + "lat": 13.885400518290856 + }, + "bbox": [ + 100.8371162553216, + 13.862917478142888, + 100.88343590403258, + 13.907883558438824 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0351_random_ecological_packet.png", + "sha256": "befe124f3fbed1a02d99845cc91f2616c530908aa56539384e49de21b04def1b", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0351_random_ecological", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0351_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0351_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0351_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0351_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0351_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0351_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 55.62, + "repair_attempts": 1 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 262144, + "min": 1.4663, + "max": 9.5852, + "mean": 3.2073, + "median": 2.9605, + "p90": 4.9338 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 953, + "schools_waterpoints": 0, + "urban_landuse": 58, + "water_surface": 34, + "waterways": 16 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0352_random_ecological_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0352_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..072931e93b1b54934e72577c34597dd9d302e235 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0352_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0352_random_ecological", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.69258564740447, + "lat": 13.60834276717377 + }, + "bbox": [ + 100.66945320443723, + 13.585859727025802, + 100.71571809037171, + 13.630825807321738 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0352_random_ecological_packet.png", + "sha256": "6d66ffbec6ec83836b5cc87b2120fcd5bee7192e9e2a90d154d37e51d25c1130", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0352_random_ecological", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0352_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0352_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0352_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0352_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0352_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0352_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 68.2186, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 254732, + "min": 2.3092, + "max": 25.6933, + "mean": 7.7464, + "median": 7.4327, + "p90": 12.2209 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 3551, + "schools_waterpoints": 4, + "urban_landuse": 2618, + "water_surface": 48, + "waterways": 27 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0353_random_ecological_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0353_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..50f8f957c76679d89ef21fd40ba30c2036688d14 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0353_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0353_random_ecological", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.79271040894838, + "lat": 13.698094249695762 + }, + "bbox": [ + 100.76956916225309, + 13.675611209547794, + 100.81585165564367, + 13.72057728984373 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0353_random_ecological_packet.png", + "sha256": "3a38741ee3972e439770ea284084bd9fff44bed62c0c2c60ced9e129ee05b116", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0353_random_ecological", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0353_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0353_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0353_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0353_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0353_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0353_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 61.1178, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 258324, + "min": 0.9921, + "max": 38.2739, + "mean": 4.9294, + "median": 2.4258, + "p90": 14.5683 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 1948, + "schools_waterpoints": 3, + "urban_landuse": 259, + "water_surface": 31, + "waterways": 53 + }, + "label_counts": { + "vector_label": 3, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0354_random_ecological_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0354_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..b17fac244a8482745e2dbc1223af5a635877730a --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0354_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0354_random_ecological", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.93211351068581, + "lat": 13.832476462829066 + }, + "bbox": [ + 100.90895896362183, + 13.809993422681098, + 100.95526805774979, + 13.854959502977033 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0354_random_ecological_packet.png", + "sha256": "aab80a4505f13172676243fb5f3ccb24b72a83ff313a9e533f08e9d0f016be10", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0354_random_ecological", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0354_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0354_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0354_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0354_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0354_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0354_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 52.5926, + "repair_attempts": 2 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 167936, + "min": 1.1927, + "max": 9.4886, + "mean": 3.0524, + "median": 2.229, + "p90": 6.0626 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 548, + "schools_waterpoints": 0, + "urban_landuse": 1, + "water_surface": 1, + "waterways": 6 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0355_random_ecological_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0355_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..e4962b4838848cdd958a00a055fc1221b3d70f01 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0355_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0355_random_ecological", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.83769013907147, + "lat": 13.653374393952467 + }, + "bbox": [ + 100.8145532868834, + 13.630891353804499, + 100.86082699125954, + 13.675857434100434 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0355_random_ecological_packet.png", + "sha256": "64dbf47cd2b855b3d795cbe67722b57e2b4abc3e5253c7c18a429d65ce873ec8", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0355_random_ecological", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0355_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0355_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0355_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0355_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0355_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0355_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 48.3596, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 257223, + "min": 1.072, + "max": 4.7487, + "mean": 1.8026, + "median": 1.5437, + "p90": 2.7569 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 848, + "schools_waterpoints": 3, + "urban_landuse": 13, + "water_surface": 1, + "waterways": 22 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0356_random_ecological_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0356_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..3c519078e56e221d9a4df87e869c4f977e736b41 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0356_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0356_random_ecological", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.47142916248804, + "lat": 13.668641134290011 + }, + "bbox": [ + 100.44829081184824, + 13.646158094142043, + 100.49456751312783, + 13.691124174437979 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0356_random_ecological_packet.png", + "sha256": "1fd58d577668eddd9b1052c17becddb0a448305dcbee654de8f9807fc8d2d822", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0356_random_ecological", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0356_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0356_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0356_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0356_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0356_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0356_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 62.4817, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 259321, + "min": 10.5655, + "max": 98.1605, + "mean": 43.6001, + "median": 38.8157, + "p90": 73.1524 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 6, + "major_roads": 4914, + "schools_waterpoints": 11, + "urban_landuse": 837, + "water_surface": 12, + "waterways": 246 + }, + "label_counts": { + "vector_label": 4, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0358_random_ecological_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0358_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..d5c235c059caf5dc32461bd40630f1c46b488052 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0358_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0358_random_ecological", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.54443978487863, + "lat": 13.689102851085874 + }, + "bbox": [ + 100.52129942301171, + 13.666619810937906, + 100.56758014674556, + 13.711585891233842 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0358_random_ecological_packet.png", + "sha256": "62d7ce957c2fb08fc867c1fd48f37521c17fe5674b4ed4964315e6e3ca3fba89", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0358_random_ecological", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0358_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0358_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0358_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0358_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0358_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0358_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 61.9602, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 226993, + "min": 8.6002, + "max": 151.9394, + "mean": 67.4659, + "median": 73.568, + "p90": 118.5314 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 30, + "major_roads": 4161, + "schools_waterpoints": 35, + "urban_landuse": 28475, + "water_surface": 134, + "waterways": 210 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0359_random_ecological_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0359_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..1727eb911571ddd2d0d4758a321604425b6f9463 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0359_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0359_random_ecological", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.81275726425402, + "lat": 13.470341007107887 + }, + "bbox": [ + 100.78963823421061, + 13.44785796695992, + 100.83587629429742, + 13.492824047255855 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0359_random_ecological_packet.png", + "sha256": "256a30b3928b96fa702545f2334c51d0c7e6459aca0f28996b46cbacec606349", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0359_random_ecological", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0359_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0359_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0359_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0359_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0359_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0359_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 32.7821, + "repair_attempts": 1 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": -5418.9731, + "max": 0.0, + "mean": -1638.0942, + "median": -931.5966, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 24006, + "min": 1.0778, + "max": 5.1541, + "mean": 2.7053, + "median": 2.4195, + "p90": 4.054 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 28, + "schools_waterpoints": 1, + "urban_landuse": 2, + "water_surface": 15, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0360_random_ecological_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0360_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..c9fa95cde86db9f5ebd2e4e0fe85452328b15b79 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0360_random_ecological_sidecar.json @@ -0,0 +1,144 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0360_random_ecological", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.6813701481962, + "lat": 13.466478846886686 + }, + "bbox": [ + 100.65825149137845, + 13.443995806738718, + 100.70448880501394, + 13.488961887034653 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0360_random_ecological_packet.png", + "sha256": "75f0d3821efd45a00792f5e6f2d914c9d209c9c1ac095324986a3a9703a12e62", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0360_random_ecological", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0360_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0360_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0360_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0360_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0360_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0360_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 19.509, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": -9999.0, + "max": -2967.1208, + "mean": -8168.8965, + "median": -8495.4551, + "p90": -5493.1919 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 0 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 0, + "schools_waterpoints": 0, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0362_random_ecological_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0362_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..e5e4142ac4da142551b49192bcbe111c0e7fa676 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0362_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0362_random_ecological", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.81091556305779, + "lat": 13.856316903206478 + }, + "bbox": [ + 100.78775864150131, + 13.83383386305851, + 100.83407248461427, + 13.878799943354446 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0362_random_ecological_packet.png", + "sha256": "c1061e2099e5fe1f337cefa6223880f08edee95d50d56d5080dc6cedc64b5f6b", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0362_random_ecological", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0362_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0362_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0362_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0362_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0362_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0362_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 55.4968, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 257542, + "min": 2.0199, + "max": 8.4953, + "mean": 4.812, + "median": 4.5535, + "p90": 6.709 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 1585, + "schools_waterpoints": 3, + "urban_landuse": 1625, + "water_surface": 4, + "waterways": 19 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0363_random_ecological_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0363_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..dc723609b7f81041d54babb4bed97bd71cf5aab8 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0363_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0363_random_ecological", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.4111299541132, + "lat": 13.545710594927305 + }, + "bbox": [ + 100.38800361716469, + 13.523227554779337, + 100.43425629106173, + 13.568193635075273 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0363_random_ecological_packet.png", + "sha256": "32e147c266c2d8204b76cfc6d7d34aaeec305e6938fbaeed25d649a4fdaa8a38", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0363_random_ecological", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0363_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0363_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0363_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0363_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0363_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0363_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 45.5287, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 19759, + "min": 1.2434, + "max": 9.4799, + "mean": 3.019, + "median": 2.6032, + "p90": 5.9693 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 532, + "schools_waterpoints": 2, + "urban_landuse": 564, + "water_surface": 415, + "waterways": 66 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0364_random_ecological_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0364_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..67e86750fe174deefa135e3da2a9d167bafef8bf --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0364_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0364_random_ecological", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.77778972902739, + "lat": 13.908922319629726 + }, + "bbox": [ + 100.75462755209249, + 13.886439279481758, + 100.8009519059623, + 13.931405359777694 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0364_random_ecological_packet.png", + "sha256": "be59dcdaa8083d7c152a1dadd48f84bf10759d79365cee5c4d3f297a85cf32ab", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0364_random_ecological", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0364_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0364_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0364_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0364_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0364_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0364_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 58.6376, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 258629, + "min": 1.1291, + "max": 12.1396, + "mean": 3.5434, + "median": 3.2221, + "p90": 5.6688 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 860, + "schools_waterpoints": 1, + "urban_landuse": 2, + "water_surface": 1, + "waterways": 10 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0365_random_ecological_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0365_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..e9b10404847b11147c732dba84d01859c07f02e9 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0365_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0365_random_ecological", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.73724873751037, + "lat": 13.943547150711405 + }, + "bbox": [ + 100.71408308953026, + 13.921064110563437, + 100.76041438549048, + 13.966030190859373 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0365_random_ecological_packet.png", + "sha256": "209e36e018b0e431b936bdb35bc31758a9c4caeca19212b7ecbc6a9272360f37", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0365_random_ecological", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0365_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0365_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0365_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0365_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0365_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0365_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 61.8355, + "repair_attempts": 1 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 200704, + "min": 1.3917, + "max": 8.7397, + "mean": 4.2788, + "median": 4.01, + "p90": 6.573 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 2, + "major_roads": 2022, + "schools_waterpoints": 1, + "urban_landuse": 1623, + "water_surface": 12, + "waterways": 2 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0366_random_ecological_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0366_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..631f0cb8c7a2bf69ca35dc7175c54436a7ec1a29 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0366_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0366_random_ecological", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.803128732041, + "lat": 13.915415454923892 + }, + "bbox": [ + 100.77996590491057, + 13.892932414775924, + 100.82629155917144, + 13.93789849507186 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0366_random_ecological_packet.png", + "sha256": "39727d51226d6b83d2fc7c7a6ca584291fa5a840b31708afa9c2511fcf85f245", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0366_random_ecological", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0366_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0366_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0366_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0366_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0366_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0366_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 53.6854, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 262144, + "min": 0.8956, + "max": 7.7008, + "mean": 2.8129, + "median": 2.6546, + "p90": 4.3222 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 682, + "schools_waterpoints": 1, + "urban_landuse": 2, + "water_surface": 1, + "waterways": 8 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0368_random_ecological_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0368_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..f72cdad01077c5ad0b44a99f0b36fca5c02a4804 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0368_random_ecological_sidecar.json @@ -0,0 +1,144 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0368_random_ecological", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.51140763092991, + "lat": 13.475131638422095 + }, + "bbox": [ + 100.48828813777395, + 13.452648598274127, + 100.53452712408587, + 13.497614678570063 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0368_random_ecological_packet.png", + "sha256": "da7345e33b0a8beaca285fc38608d213f42b00f7cc8ac4a19276f08fd210ca6c", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0368_random_ecological", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0368_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0368_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0368_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0368_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0368_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0368_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 18.0075, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": -9999.0, + "max": -1462.2543, + "mean": -6602.001, + "median": -6609.229, + "p90": -3325.0857 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 0 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 0, + "schools_waterpoints": 0, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0369_random_ecological_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0369_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..16662a5ed03ade769e47366340bfb34687a8dde2 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0369_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0369_random_ecological", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.43707277183, + "lat": 13.787895672814999 + }, + "bbox": [ + 100.41392265292411, + 13.765412632667031, + 100.46022289073589, + 13.810378712962967 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0369_random_ecological_packet.png", + "sha256": "453579b1558cf8d94edc8298bd70dcd561dfe01f2d6e295a6abfffd006795458", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0369_random_ecological", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0369_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0369_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0369_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0369_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0369_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0369_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 59.5803, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261460, + "min": 7.0339, + "max": 82.1953, + "mean": 25.2565, + "median": 23.8914, + "p90": 39.1139 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 2, + "major_roads": 4566, + "schools_waterpoints": 14, + "urban_landuse": 1330, + "water_surface": 25, + "waterways": 68 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0370_random_ecological_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0370_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..126cc1845910a6621ee553b2ee64382190427a90 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0370_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0370_random_ecological", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.57605070444365, + "lat": 13.516834786763622 + }, + "bbox": [ + 100.55292717221133, + 13.494351746615655, + 100.59917423667596, + 13.53931782691159 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0370_random_ecological_packet.png", + "sha256": "8991aa5ee294fef1a75e2ae75d88d30fa84a2eda4a3cb4602b66215a3a2ae15c", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0370_random_ecological", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0370_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0370_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0370_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0370_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0370_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0370_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 39.5581, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": -6120.1475, + "max": 0.0, + "mean": -2088.6594, + "median": -1632.7705, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 14960, + "min": 1.0135, + "max": 6.1485, + "mean": 2.6317, + "median": 2.322, + "p90": 4.7699 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 33, + "schools_waterpoints": 0, + "urban_landuse": 97, + "water_surface": 8, + "waterways": 7 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0371_random_ecological_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0371_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..c1b4f49f3d942ee400a2bbd7f9c1e4ea6ad71406 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0371_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0371_random_ecological", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.74728729861407, + "lat": 13.606020217621031 + }, + "bbox": [ + 100.72415508262361, + 13.583537177473064, + 100.77041951460453, + 13.628503257769 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0371_random_ecological_packet.png", + "sha256": "2edcfb123bdeb2daea9ebfce712ec57eca74fa3ca833ea6963fe2de8c67c46ee", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0371_random_ecological", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0371_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0371_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0371_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0371_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0371_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0371_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 66.5191, + "repair_attempts": 1 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 260396, + "min": 2.1688, + "max": 18.1514, + "mean": 7.1534, + "median": 6.6496, + "p90": 10.7819 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 3188, + "schools_waterpoints": 7, + "urban_landuse": 105, + "water_surface": 29, + "waterways": 43 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0373_uncertain_sparse_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0373_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..5aca92bd5d76e9764ea4a21033c2cbea7591a5c6 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0373_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0373_uncertain_sparse_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.73903196039032, + "lat": 13.561669677328997 + }, + "bbox": [ + 100.71590407051853, + 13.539186637181029, + 100.76215985026211, + 13.584152717476965 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0373_uncertain_sparse_context_packet.png", + "sha256": "b20ddecdfc769ad95455c324efcfcb1c42aa2f8f88d9d739f3e6e8735cbe82e5", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0373_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0373_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0373_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0373_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0373_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0373_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0373_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 61.5467, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 260928, + "min": 0.8983, + "max": 12.757, + "mean": 2.2958, + "median": 1.9582, + "p90": 3.736 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 1691, + "schools_waterpoints": 0, + "urban_landuse": 2928, + "water_surface": 5, + "waterways": 21 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0374_uncertain_sparse_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0374_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..5e62a08fbdd48181cc0e83d99296d5b68aa359b9 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0374_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0374_uncertain_sparse_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.54372032119541, + "lat": 13.757424121421899 + }, + "bbox": [ + 100.52057321995751, + 13.73494108127393, + 100.5668674224333, + 13.779907161569867 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0374_uncertain_sparse_context_packet.png", + "sha256": "52fac8a22860086ece3d2280e1a58183d84f62642909d2b1330abc4771e515dc", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0374_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0374_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0374_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0374_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0374_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0374_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0374_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 58.2241, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261441, + "min": 30.8748, + "max": 143.3565, + "mean": 91.3367, + "median": 92.4981, + "p90": 121.625 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 169, + "major_roads": 7260, + "schools_waterpoints": 142, + "urban_landuse": 17940, + "water_surface": 233, + "waterways": 100 + }, + "label_counts": { + "vector_label": 10, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0375_uncertain_sparse_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0375_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..95bdb8ac181924a7b8bde04a2cb4e308d9efdb97 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0375_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0375_uncertain_sparse_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.68852380265051, + "lat": 13.921274163309793 + }, + "bbox": [ + 100.66536038856678, + 13.898791123161825, + 100.71168721673423, + 13.94375720345776 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0375_uncertain_sparse_context_packet.png", + "sha256": "1285a8597cf875cce5970ec8915aee8385a083468bed68493217cfc98d11dc77", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0375_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0375_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0375_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0375_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0375_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0375_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0375_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 62.8463, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 262144, + "min": 3.8001, + "max": 48.4703, + "mean": 16.1627, + "median": 14.5645, + "p90": 27.0726 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 17, + "major_roads": 3842, + "schools_waterpoints": 5, + "urban_landuse": 3689, + "water_surface": 64, + "waterways": 22 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0376_uncertain_sparse_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0376_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..ba4b9fb29caf45fe1771b25f2d9fcfddc8bb3630 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0376_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0376_uncertain_sparse_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.50011353016228, + "lat": 13.717442379428554 + }, + "bbox": [ + 100.4769703772878, + 13.694959339280587, + 100.52325668303676, + 13.739925419576522 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0376_uncertain_sparse_context_packet.png", + "sha256": "4d80a4907c58e076825a2f67941c0ddad45b33ef23a7c95ba6d851f4d15b6c2d", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0376_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0376_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0376_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0376_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0376_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0376_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0376_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 54.9665, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 239346, + "min": 36.5102, + "max": 158.2928, + "mean": 109.0596, + "median": 112.3201, + "p90": 140.1759 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 67, + "major_roads": 6160, + "schools_waterpoints": 105, + "urban_landuse": 12068, + "water_surface": 24, + "waterways": 172 + }, + "label_counts": { + "vector_label": 14, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0377_uncertain_sparse_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0377_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..26858f77587b8728bd24a9900c88c535a832e2f0 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0377_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0377_uncertain_sparse_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.51357412156507, + "lat": 13.7372296859024 + }, + "bbox": [ + 100.49042901618874, + 13.714746645754433, + 100.5367192269414, + 13.759712726050369 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0377_uncertain_sparse_context_packet.png", + "sha256": "3937d0b2940cf2b0641301d57fc19a7b5c3ec3359f34d13f5c074931873e5ebe", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0377_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0377_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0377_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0377_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0377_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0377_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0377_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 58.3194, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 249888, + "min": 38.3503, + "max": 162.5504, + "mean": 95.5588, + "median": 90.8404, + "p90": 125.7989 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 178, + "major_roads": 7107, + "schools_waterpoints": 220, + "urban_landuse": 25327, + "water_surface": 117, + "waterways": 196 + }, + "label_counts": { + "vector_label": 23, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0378_uncertain_sparse_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0378_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..964c01d061c7adeefabd7f75f80f425b60346f00 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0378_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0378_uncertain_sparse_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.60350830416303, + "lat": 13.634623292322761 + }, + "bbox": [ + 100.58037328990854, + 13.612140252174793, + 100.62664331841752, + 13.657106332470729 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0378_uncertain_sparse_context_packet.png", + "sha256": "2ba08ef62364ac28def9674e4fb7e527ab8994c152c008fd19c23a7b6f58a9b7", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0378_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0378_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0378_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0378_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0378_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0378_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0378_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 61.8212, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261250, + "min": 15.0845, + "max": 73.0478, + "mean": 43.8983, + "median": 45.8084, + "p90": 57.6433 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 4, + "major_roads": 3945, + "schools_waterpoints": 13, + "urban_landuse": 38784, + "water_surface": 32, + "waterways": 47 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0379_uncertain_sparse_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0379_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..4865d634b86de7c7b8235d3ef1a4e461ba2bff79 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0379_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0379_uncertain_sparse_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.55764897087172, + "lat": 13.625236148244507 + }, + "bbox": [ + 100.53451487568005, + 13.60275310809654, + 100.5807830660634, + 13.647719188392475 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0379_uncertain_sparse_context_packet.png", + "sha256": "63a5962a291b3dac13a2b21a7b133dee048d4d847c3da144e06e293ae29558cd", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0379_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0379_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0379_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0379_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0379_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0379_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0379_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 64.4196, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 225876, + "min": 10.0119, + "max": 62.566, + "mean": 32.336, + "median": 30.2997, + "p90": 48.7538 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 2785, + "schools_waterpoints": 8, + "urban_landuse": 6378, + "water_surface": 20, + "waterways": 56 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0380_uncertain_sparse_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0380_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..c6de1de08bc1f9627a5a9e2ebc8c787e5d251253 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0380_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0380_uncertain_sparse_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.6288926054378, + "lat": 13.63625713301822 + }, + "bbox": [ + 100.6057574311487, + 13.613774092870251, + 100.6520277797269, + 13.658740173166187 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0380_uncertain_sparse_context_packet.png", + "sha256": "c45a86545da2b1e0c4a65b49381ffb68bb43cd60f42285bf308577092c4ce3b6", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0380_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0380_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0380_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0380_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0380_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0380_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0380_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 61.6963, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 262144, + "min": 5.3597, + "max": 63.3527, + "mean": 31.1615, + "median": 32.217, + "p90": 49.4115 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 9, + "major_roads": 4387, + "schools_waterpoints": 13, + "urban_landuse": 28094, + "water_surface": 27, + "waterways": 10 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0381_uncertain_sparse_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0381_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..659fb5de38cea5eee520c955b03c90931f06f369 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0381_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0381_uncertain_sparse_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.61322656111913, + "lat": 13.64798764530649 + }, + "bbox": [ + 100.59009023720955, + 13.625504605158522, + 100.63636288502872, + 13.670470685454458 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0381_uncertain_sparse_context_packet.png", + "sha256": "158dc2a59353b11b608cb5692817f8c8c410fdaace9a8a0d9d2a97b2bdcf115a", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0381_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0381_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0381_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0381_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0381_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0381_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0381_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 60.8897, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 262144, + "min": 10.3145, + "max": 79.8779, + "mean": 45.4593, + "median": 46.2149, + "p90": 62.4891 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 6, + "major_roads": 4051, + "schools_waterpoints": 21, + "urban_landuse": 27260, + "water_surface": 56, + "waterways": 24 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0382_uncertain_sparse_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0382_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..8b7bb2ca596a3b3b95ed8fa43c536590835cbd2d --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0382_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0382_uncertain_sparse_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.37217961574409, + "lat": 13.575493365331079 + }, + "bbox": [ + 100.34905037911787, + 13.553010325183111, + 100.3953088523703, + 13.597976405479047 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0382_uncertain_sparse_context_packet.png", + "sha256": "89e3ecc57110ff925a59399598211d31ac5e3776227d8d681be0550a29d2bc86", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0382_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0382_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0382_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0382_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0382_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0382_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0382_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 68.6144, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 139464, + "min": 1.407, + "max": 11.9195, + "mean": 4.8253, + "median": 4.761, + "p90": 7.6248 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 2616, + "schools_waterpoints": 5, + "urban_landuse": 3407, + "water_surface": 80, + "waterways": 33 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0383_uncertain_sparse_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0383_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..6f6c7dc9ea5d31738e6bf5b377c2f455d6e11785 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0383_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0383_uncertain_sparse_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.73191818834016, + "lat": 13.571667903160543 + }, + "bbox": [ + 100.70878932455494, + 13.549184863012576, + 100.75504705212538, + 13.594150943308511 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0383_uncertain_sparse_context_packet.png", + "sha256": "73c9102df75c0b1b7f79cc84aa5a0b09323e3a111972530323900a0d1ecfd9ef", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0383_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0383_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0383_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0383_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0383_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0383_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0383_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 64.5468, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 259564, + "min": 0.9166, + "max": 15.2916, + "mean": 3.4313, + "median": 2.4551, + "p90": 7.1048 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 2090, + "schools_waterpoints": 1, + "urban_landuse": 3148, + "water_surface": 9, + "waterways": 26 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0384_uncertain_sparse_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0384_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..2650ad01ccfbfab812d6a96c8d716c436bc51f2a --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0384_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0384_uncertain_sparse_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.6333570978661, + "lat": 13.596297817717682 + }, + "bbox": [ + 100.61022583155979, + 13.573814777569714, + 100.6564883641724, + 13.61878085786565 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0384_uncertain_sparse_context_packet.png", + "sha256": "6e9f7f4a29361ecf1b2175a967648f485c70f89140ba2b1d59f1408fd4105ea6", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0384_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0384_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0384_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0384_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0384_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0384_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0384_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 61.7222, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 260358, + "min": 7.4019, + "max": 52.7435, + "mean": 23.8348, + "median": 23.0588, + "p90": 38.4345 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 5, + "major_roads": 4133, + "schools_waterpoints": 9, + "urban_landuse": 26051, + "water_surface": 50, + "waterways": 43 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0385_uncertain_sparse_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0385_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..357b8bea851a3d7d617eb0508687d92e71b2ea6a --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0385_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0385_uncertain_sparse_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.43708228886938, + "lat": 13.808363758678674 + }, + "bbox": [ + 100.41393013884296, + 13.785880718530706, + 100.4602344388958, + 13.830846798826641 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0385_uncertain_sparse_context_packet.png", + "sha256": "1ddb008b061ce186331812f76cecd39f3e8ed2cd65f659b159a0dd58b6364723", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0385_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0385_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0385_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0385_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0385_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0385_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0385_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 60.8938, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261190, + "min": 4.9089, + "max": 58.4846, + "mean": 15.476, + "median": 12.5319, + "p90": 27.7521 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 2, + "major_roads": 4765, + "schools_waterpoints": 14, + "urban_landuse": 662, + "water_surface": 20, + "waterways": 43 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0386_uncertain_sparse_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0386_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..1b8c532f4b19593fef2ab6408705c6feacab150a --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0386_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0386_uncertain_sparse_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.72972372157056, + "lat": 13.920285016755791 + }, + "bbox": [ + 100.70656040660333, + 13.897801976607823, + 100.7528870365378, + 13.942768056903759 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0386_uncertain_sparse_context_packet.png", + "sha256": "43bb1aa90e3c8ce2297a0696c3f4213515879a35bf5052de88404da297016be5", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0386_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0386_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0386_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0386_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0386_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0386_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0386_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 62.018, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261612, + "min": 2.1891, + "max": 16.2526, + "mean": 6.5829, + "median": 6.1021, + "p90": 10.5821 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 2593, + "schools_waterpoints": 2, + "urban_landuse": 2246, + "water_surface": 25, + "waterways": 10 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0387_uncertain_sparse_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0387_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..5a6ddd28bf95ad0aa274e719a1c0dfce0b9cefc6 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0387_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0387_uncertain_sparse_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.47561643854881, + "lat": 13.891530687524117 + }, + "bbox": [ + 100.45245600149447, + 13.86904764737615, + 100.49877687560316, + 13.914013727672085 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0387_uncertain_sparse_context_packet.png", + "sha256": "86ef5448cd46b8b5137ec84ec82329c9c2e6e5ed7801acd90f1868d24d9879eb", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0387_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0387_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0387_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0387_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0387_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0387_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0387_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 58.2275, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 244879, + "min": 4.1003, + "max": 67.1076, + "mean": 21.4315, + "median": 18.0666, + "p90": 42.2958 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 5, + "major_roads": 3290, + "schools_waterpoints": 15, + "urban_landuse": 3530, + "water_surface": 18, + "waterways": 38 + }, + "label_counts": { + "vector_label": 2, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0388_uncertain_sparse_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0388_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..ee0a5148a76d46912c76128d4bbd2d8ad0caae93 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0388_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0388_uncertain_sparse_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.6413788393295, + "lat": 13.6266530991334 + }, + "bbox": [ + 100.61824460545353, + 13.604170058985432, + 100.66451307320548, + 13.649136139281367 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0388_uncertain_sparse_context_packet.png", + "sha256": "7e6ba8638a207e814c26fcb3258bccd891ee3377c2dff05ddce08ab041614193", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0388_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0388_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0388_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0388_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0388_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0388_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0388_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 62.2815, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261640, + "min": 3.5738, + "max": 58.3356, + "mean": 22.184, + "median": 22.3427, + "p90": 42.8465 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 4291, + "schools_waterpoints": 8, + "urban_landuse": 23004, + "water_surface": 63, + "waterways": 18 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0389_uncertain_sparse_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0389_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..bc3b258d5007c9efb4799161cfc9f97934327d2f --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0389_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0389_uncertain_sparse_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.66444541611831, + "lat": 13.937636030461597 + }, + "bbox": [ + 100.64128036138445, + 13.91515299031363, + 100.68761047085218, + 13.960119070609565 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0389_uncertain_sparse_context_packet.png", + "sha256": "6492ff1809428a7f34c3753c6efebccab96fd623f19a8d8548c31890f346cd91", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0389_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0389_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0389_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0389_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0389_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0389_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0389_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 60.3276, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 235008, + "min": 5.1921, + "max": 59.2731, + "mean": 20.0131, + "median": 18.0576, + "p90": 31.6163 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 14, + "major_roads": 3625, + "schools_waterpoints": 5, + "urban_landuse": 1105, + "water_surface": 27, + "waterways": 15 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0390_uncertain_sparse_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0390_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..4b9d1da619776c3ff7db9ac55319786ea5afe04b --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0390_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0390_uncertain_sparse_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.37058430589643, + "lat": 13.714470384937076 + }, + "bbox": [ + 100.34744144601503, + 13.691987344789109, + 100.39372716577783, + 13.736953425085044 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0390_uncertain_sparse_context_packet.png", + "sha256": "332bb00e565a1eab190f09c9c2fa70cda06f8e9b3328e5d6bd232e413b3b79d9", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0390_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0390_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0390_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0390_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0390_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0390_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0390_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 59.7742, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261783, + "min": 11.9382, + "max": 78.3714, + "mean": 40.6386, + "median": 38.0048, + "p90": 60.1446 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 23, + "major_roads": 3659, + "schools_waterpoints": 22, + "urban_landuse": 1882, + "water_surface": 40, + "waterways": 36 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0391_uncertain_sparse_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0391_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..5c9b7e89f3f403323b03d1ebdc6125e110fe8ea8 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0391_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0391_uncertain_sparse_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.6163067449616, + "lat": 13.61882397902875 + }, + "bbox": [ + 100.59317327716431, + 13.596340938880783, + 100.6394402127589, + 13.641307019176718 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0391_uncertain_sparse_context_packet.png", + "sha256": "b3c2f9ddfa4aeddda630b449db11ec49f903f1817cab18acf2618bc46f8debec", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0391_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0391_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0391_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0391_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0391_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0391_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0391_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 58.9022, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 259361, + "min": 7.2239, + "max": 64.8902, + "mean": 35.7813, + "median": 36.143, + "p90": 51.1181 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 7, + "major_roads": 4109, + "schools_waterpoints": 14, + "urban_landuse": 37448, + "water_surface": 47, + "waterways": 30 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0392_uncertain_sparse_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0392_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..7f179fa84030b36e4ef03e8b697892cfc56ba9c2 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0392_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0392_uncertain_sparse_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.43137361008272, + "lat": 13.607827485982918 + }, + "bbox": [ + 100.40824121747625, + 13.58534444583495, + 100.45450600268919, + 13.630310526130886 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0392_uncertain_sparse_context_packet.png", + "sha256": "e587235c02797709ee6b46c0a68b3eacd07a0625b06c6f6b571dc86f3496e7f5", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0392_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0392_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0392_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0392_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0392_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0392_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0392_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 65.9831, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 153153, + "min": 2.1769, + "max": 53.4657, + "mean": 18.2137, + "median": 18.9956, + "p90": 28.2461 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 2004, + "schools_waterpoints": 4, + "urban_landuse": 3410, + "water_surface": 547, + "waterways": 65 + }, + "label_counts": { + "vector_label": 2, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0393_uncertain_sparse_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0393_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..9caab166b5fd46119c372fde56fa25279d6e7a4a --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0393_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0393_uncertain_sparse_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.66510106545105, + "lat": 13.60711219782636 + }, + "bbox": [ + 100.64196874274947, + 13.584629157678393, + 100.68823338815264, + 13.629595237974328 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0393_uncertain_sparse_context_packet.png", + "sha256": "db3539e00004680c91ff3702cb5a10a82eb958ef40c07b366a07e84c399727ce", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0393_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0393_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0393_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0393_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0393_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0393_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0393_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 65.2902, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 256732, + "min": 2.0983, + "max": 52.6587, + "mean": 12.0856, + "median": 9.5027, + "p90": 22.5951 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 5, + "major_roads": 4078, + "schools_waterpoints": 2, + "urban_landuse": 16934, + "water_surface": 80, + "waterways": 29 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0394_uncertain_sparse_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0394_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..1fbf4f129987e243091b77a933da65971e69d1ed --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0394_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0394_uncertain_sparse_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.54510416876407, + "lat": 13.70654190418225 + }, + "bbox": [ + 100.52196209016842, + 13.684058864034283, + 100.56824624735972, + 13.729024944330218 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0394_uncertain_sparse_context_packet.png", + "sha256": "2d0618cf2595045798cca6d77717e57130e31205a6778f65995953cf563db928", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0394_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0394_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0394_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0394_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0394_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0394_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0394_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 60.8579, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 245053, + "min": 8.579, + "max": 162.5981, + "mean": 88.7399, + "median": 93.6918, + "p90": 131.9123 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 96, + "major_roads": 6020, + "schools_waterpoints": 100, + "urban_landuse": 32327, + "water_surface": 79, + "waterways": 158 + }, + "label_counts": { + "vector_label": 4, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0395_uncertain_sparse_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0395_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..3733abafa7c2cffbfcff4bef3678f9b4234b2662 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0395_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0395_uncertain_sparse_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.49132882811908, + "lat": 13.614668152138568 + }, + "bbox": [ + 100.46819576677296, + 13.5921851119906, + 100.5144618894652, + 13.637151192286536 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0395_uncertain_sparse_context_packet.png", + "sha256": "ae633ec88163019f2916c4a69fe8de0196dd92161d5511a43a2b081cf7eeb011", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0395_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0395_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0395_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0395_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0395_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0395_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0395_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 58.5913, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 232139, + "min": 2.0425, + "max": 66.0858, + "mean": 18.0463, + "median": 15.2888, + "p90": 36.8578 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 2591, + "schools_waterpoints": 9, + "urban_landuse": 3082, + "water_surface": 766, + "waterways": 301 + }, + "label_counts": { + "vector_label": 3, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0396_uncertain_sparse_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0396_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..c1ab7ff17a0ff6ce84f0a650e531dc81461c2deb --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0396_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0396_uncertain_sparse_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.55053196725392, + "lat": 13.63751349847012 + }, + "bbox": [ + 100.5273966698896, + 13.615030458322153, + 100.57366726461824, + 13.659996538618088 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0396_uncertain_sparse_context_packet.png", + "sha256": "ef938a01023252668f13f36c250c0b97c4b02aa20a0bdd98e7b066f926e7b5be", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0396_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0396_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0396_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0396_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0396_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0396_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0396_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 62.6091, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 216337, + "min": 9.9875, + "max": 70.6557, + "mean": 37.2555, + "median": 37.172, + "p90": 52.6317 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 2, + "major_roads": 2699, + "schools_waterpoints": 19, + "urban_landuse": 5240, + "water_surface": 17, + "waterways": 58 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0397_uncertain_sparse_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0397_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..b8c90d170e2f0335b7950fce26af21cba7eec6fa --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0397_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0397_uncertain_sparse_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.8475387920499, + "lat": 13.862167646621558 + }, + "bbox": [ + 100.82438128707598, + 13.83968460647359, + 100.87069629702383, + 13.884650686769525 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0397_uncertain_sparse_context_packet.png", + "sha256": "70c4c60a44e5b3aa0930aafd994722a1179585c96427849f5f0c4557869f7005", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0397_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0397_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0397_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0397_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0397_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0397_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0397_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 56.905, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 262144, + "min": 1.5616, + "max": 16.6665, + "mean": 5.3475, + "median": 4.3329, + "p90": 9.2527 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 1955, + "schools_waterpoints": 2, + "urban_landuse": 6023, + "water_surface": 5, + "waterways": 16 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0398_uncertain_sparse_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0398_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..0858b342e9dabc14bb014ad1bf584cd7d432457e --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0398_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0398_uncertain_sparse_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.52843832141352, + "lat": 13.69709490218858 + }, + "bbox": [ + 100.50529717309382, + 13.674611862040612, + 100.55157946973321, + 13.719577942336548 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0398_uncertain_sparse_context_packet.png", + "sha256": "82ab88427ac2a521825f5ef076563f5fc154de4d956d79e0db020c23f65b347d", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0398_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0398_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0398_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0398_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0398_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0398_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0398_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 58.9695, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 236966, + "min": 25.1248, + "max": 162.5372, + "mean": 100.1389, + "median": 103.5527, + "p90": 129.3069 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 45, + "major_roads": 6040, + "schools_waterpoints": 81, + "urban_landuse": 32390, + "water_surface": 49, + "waterways": 211 + }, + "label_counts": { + "vector_label": 4, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0399_uncertain_sparse_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0399_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..509d69262fe17c6356ae44b561f9ce46899bcff5 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0399_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0399_uncertain_sparse_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.77244031415255, + "lat": 13.75803138670005 + }, + "bbox": [ + 100.74929315284739, + 13.735548346552083, + 100.79558747545771, + 13.780514426848018 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0399_uncertain_sparse_context_packet.png", + "sha256": "f8164a229e9497000c368939b5289ebcece2de5b864e1f0a2fdfc5b4dcc80944", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0399_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0399_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0399_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0399_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0399_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0399_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0399_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 63.6422, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261460, + "min": 5.924, + "max": 50.3569, + "mean": 18.9071, + "median": 17.7829, + "p90": 28.2265 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 2003, + "schools_waterpoints": 4, + "urban_landuse": 1057, + "water_surface": 80, + "waterways": 51 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0400_uncertain_sparse_context_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0400_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..107164126eca586f6237b7529d7db386e62f3cca --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0400_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0400_uncertain_sparse_context", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.63307775122371, + "lat": 13.603179349851269 + }, + "bbox": [ + 100.60994581280619, + 13.5806963097033, + 100.65620968964123, + 13.625662389999237 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0400_uncertain_sparse_context_packet.png", + "sha256": "c4af8089c1efe28846bb93150cd50348f24942b6769291934db81c377cdccca5", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0400_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0400_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0400_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0400_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0400_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0400_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0400_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 60.4218, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261441, + "min": 5.5966, + "max": 57.7719, + "mean": 24.0832, + "median": 23.0216, + "p90": 41.0292 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 5, + "major_roads": 4155, + "schools_waterpoints": 6, + "urban_landuse": 28785, + "water_surface": 54, + "waterways": 35 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/bangkok_dengue/bangkok_dengue_s0402_label_positive_jitter_sidecar.json b/sidecars/bangkok_dengue/bangkok_dengue_s0402_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..21e65669935c24efe0a74318c54d761fe4d95fc9 --- /dev/null +++ b/sidecars/bangkok_dengue/bangkok_dengue_s0402_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "bangkok_dengue_s0402_label_positive_jitter", + "aoi_id": "bangkok_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Thailand", + "name": "Bangkok, Thailand", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 100.49127640456436, + "lat": 13.665680820707824 + }, + "bbox": [ + 100.468138344627, + 13.643197780559856, + 100.51441446450173, + 13.688163860855791 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/bangkok_dengue/bangkok_dengue_s0402_label_positive_jitter_packet.png", + "sha256": "eb6a3a08e2e66b5bd785b5248b1fe474d3e28876e8b8fbfa7d0c7f4b3a82ac16", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/bangkok_dengue/bangkok_dengue_s0402_label_positive_jitter", + "sentinel_rgb": "simsat_raw/bangkok_dengue/bangkok_dengue_s0402_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/bangkok_dengue/bangkok_dengue_s0402_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/bangkok_dengue/bangkok_dengue_s0402_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0402_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/bangkok_dengue/bangkok_dengue_s0402_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/bangkok_dengue/bangkok_dengue_s0402_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/bangkok_thailand/bangkok_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/bangkok_thailand/bangkok_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/bangkok_thailand/bangkok_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/bangkok_thailand/osm_health_facilities_bangkok.overpass.json", + "major_roads": "data/raw/osm/bangkok_thailand/osm_major_roads_bangkok.overpass.json", + "schools_waterpoints": "data/raw/osm/bangkok_thailand/osm_schools_waterpoints_bangkok.overpass.json", + "urban_landuse": "data/raw/osm/bangkok_thailand/osm_urban_landuse_bangkok.overpass.json", + "water_surface": "data/raw/osm/bangkok_thailand/osm_water_surface_bangkok.overpass.json", + "waterways": "data/raw/osm/bangkok_thailand/osm_waterways_bangkok.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/bangkok_thailand/gbif_aedes_bangkok_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/bangkok_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000886, + "sentinel_datetime": "2025-12-03T03:54:42Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 61.1457, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 253259, + "min": 9.3062, + "max": 98.1672, + "mean": 49.2133, + "median": 46.8725, + "p90": 79.3031 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 14, + "major_roads": 4917, + "schools_waterpoints": 10, + "urban_landuse": 1270, + "water_surface": 15, + "waterways": 141 + }, + "label_counts": { + "vector_label": 5, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0001_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0001_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..91995759a0cd47069da3398ccc53c5c1547df9c5 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0001_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0001_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.34882431965534, + "lat": 23.801669658857 + }, + "bbox": [ + 90.32425129210041, + 23.779186618709033, + 90.37339734721026, + 23.82415269900497 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0001_label_positive_jitter_packet.png", + "sha256": "fb17fab5d4b75cf0d483edb0a0e2fa3da91d4d97b7d2d8b18b64ae1d4208ddec", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0001_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0001_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0001_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0001_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0001_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0001_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0001_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 50.8169, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 192471, + "min": 66.157, + "max": 1136.9485, + "mean": 327.3386, + "median": 198.0312, + "p90": 684.5788 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 480, + "major_roads": 2658, + "schools_waterpoints": 257, + "urban_landuse": 59884, + "water_surface": 74, + "waterways": 25 + }, + "label_counts": { + "vector_label": 2, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0003_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0003_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..ea9f44b9138625d06b57107cae2b41595729f801 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0003_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0003_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.26122127441096, + "lat": 23.7986017497151 + }, + "bbox": [ + 90.23664882717468, + 23.776118709567132, + 90.28579372164724, + 23.821084789863068 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0003_label_positive_jitter_packet.png", + "sha256": "f164f1d6cd0d75d32b64012b63190bbec345513eac15221186511199bbc9f636", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0003_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0003_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0003_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0003_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0003_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0003_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0003_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 55.6472, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 224372, + "min": 8.112, + "max": 42.0358, + "mean": 23.4827, + "median": 23.8303, + "p90": 29.7088 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 8, + "major_roads": 308, + "schools_waterpoints": 9, + "urban_landuse": 22146, + "water_surface": 165, + "waterways": 4 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0004_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0004_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..fadc00427d0d5a7a30cea8453ade3b9d9edda080 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0004_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0004_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.40809232820766, + "lat": 23.801200721051966 + }, + "bbox": [ + 90.38351938936226, + 23.778717680904, + 90.43266526705305, + 23.823683761199934 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0004_label_positive_jitter_packet.png", + "sha256": "98ac68a6026c2b9d3b1566e2e350ed048763d1b2378bd9a7df0d67619f826517", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0004_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0004_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0004_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0004_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0004_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0004_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0004_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 48.8823, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 237228, + "min": 3.3852, + "max": 598.7011, + "mean": 173.5362, + "median": 156.2481, + "p90": 295.8866 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 341, + "major_roads": 1879, + "schools_waterpoints": 331, + "urban_landuse": 46744, + "water_surface": 170, + "waterways": 6 + }, + "label_counts": { + "vector_label": 7, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0005_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0005_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..8c3366ab4e33215d49e8bfc48f42903e4e890899 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0005_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0005_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.40949131989512, + "lat": 23.709746134473633 + }, + "bbox": [ + 90.3849356379636, + 23.687263094325665, + 90.43404700182666, + 23.7322291746216 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0005_label_positive_jitter_packet.png", + "sha256": "fc0ac32a071f559900d3d7a960e60b61bb5aefb0fca0e06ea127361e63781c5e", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0005_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0005_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0005_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0005_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0005_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0005_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0005_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 47.8533, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 256431, + "min": 0.0, + "max": 1105.0942, + "mean": 263.1409, + "median": 195.7174, + "p90": 590.4274 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 312, + "major_roads": 2490, + "schools_waterpoints": 284, + "urban_landuse": 72269, + "water_surface": 88, + "waterways": 1490 + }, + "label_counts": { + "vector_label": 14, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0006_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0006_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..435718df462da680188c4b300942a89a316525e9 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0006_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0006_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.39949561811231, + "lat": 23.72832796349101 + }, + "bbox": [ + 90.37493643693156, + 23.705844923343044, + 90.42405479929306, + 23.75081100363898 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0006_label_positive_jitter_packet.png", + "sha256": "7728024c3224d7802fbfd3e21d0b17ac8f12d885e0649354344c676d424a8ecc", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0006_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0006_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0006_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0006_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0006_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0006_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0006_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 46.9481, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 249963, + "min": 0.0, + "max": 1101.9014, + "mean": 328.1275, + "median": 292.919, + "p90": 594.9905 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 369, + "major_roads": 2827, + "schools_waterpoints": 359, + "urban_landuse": 57367, + "water_surface": 85, + "waterways": 1481 + }, + "label_counts": { + "vector_label": 16, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0008_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0008_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..af63300a3a02780c36207bfa5fea889ec2dce5af --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0008_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0008_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.2652763931587, + "lat": 23.886687679213267 + }, + "bbox": [ + 90.24068724481896, + 23.8642046390653, + 90.28986554149844, + 23.909170719361235 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0008_label_positive_jitter_packet.png", + "sha256": "3333bbd067009ef9a94e3fd9ba7555ee688d32f99a249b999015be00b616ddc9", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0008_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0008_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0008_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0008_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0008_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0008_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0008_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 56.2034, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 245516, + "min": 12.2793, + "max": 39.1106, + "mean": 20.5624, + "median": 20.0988, + "p90": 23.7422 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 24, + "major_roads": 642, + "schools_waterpoints": 20, + "urban_landuse": 17060, + "water_surface": 201, + "waterways": 13 + }, + "label_counts": { + "vector_label": 4, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0011_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0011_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..be0a5fba877190b42dcf89bcf00972a0af849d99 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0011_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0011_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.40277988902308, + "lat": 23.7261185109556 + }, + "bbox": [ + 90.37822112410437, + 23.703635470807633, + 90.42733865394179, + 23.74860155110357 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0011_label_positive_jitter_packet.png", + "sha256": "d4970df7981b1cf1d1a83a05f9fb2caf9e22ad7581250274de3cb4661cc1fd3e", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0011_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0011_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0011_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0011_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0011_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0011_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0011_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 47.1208, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 251597, + "min": 0.0, + "max": 1100.9425, + "mean": 321.7934, + "median": 284.0278, + "p90": 594.1419 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 379, + "major_roads": 2821, + "schools_waterpoints": 362, + "urban_landuse": 57286, + "water_surface": 84, + "waterways": 1484 + }, + "label_counts": { + "vector_label": 16, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0012_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0012_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..71e129edf1341bda34c902d8b30ab7e71050b923 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0012_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0012_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.40223666310582, + "lat": 23.729647328389415 + }, + "bbox": [ + 90.37767723333187, + 23.707164288241447, + 90.42679609287978, + 23.752130368537383 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0012_label_positive_jitter_packet.png", + "sha256": "3bcec357174a269f1fcb0f72bb737a55ee75d22795b35203d9539a969efbff85", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0012_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0012_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0012_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0012_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0012_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0012_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0012_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 46.9347, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 252764, + "min": 0.0, + "max": 1102.1464, + "mean": 335.5294, + "median": 300.1075, + "p90": 593.6313 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 420, + "major_roads": 2944, + "schools_waterpoints": 375, + "urban_landuse": 55138, + "water_surface": 87, + "waterways": 1481 + }, + "label_counts": { + "vector_label": 16, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0013_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0013_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..acc61186f59509aeeeb812b08b5314d8c46c2f66 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0013_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0013_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.40929221601014, + "lat": 23.782225150011566 + }, + "bbox": [ + 90.38472286487873, + 23.7597421098636, + 90.43386156714156, + 23.804708190159534 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0013_label_positive_jitter_packet.png", + "sha256": "ac28410f53f294e60945e87b48f9939b16e3fa83f835f8af00e81f835573ca8a", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0013_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0013_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0013_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0013_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0013_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0013_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0013_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 47.6858, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 240380, + "min": 10.4115, + "max": 637.1988, + "mean": 253.8765, + "median": 238.5298, + "p90": 448.2862 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 382, + "major_roads": 2205, + "schools_waterpoints": 567, + "urban_landuse": 52869, + "water_surface": 84, + "waterways": 13 + }, + "label_counts": { + "vector_label": 7, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0014_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0014_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..9a43430af1c2fdd95356527ee31d0356b5c0445d --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0014_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0014_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.40111805890564, + "lat": 23.713940542905036 + }, + "bbox": [ + 90.3765615874142, + 23.691457502757068, + 90.42567453039707, + 23.736423583053003 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0014_label_positive_jitter_packet.png", + "sha256": "dc1ea8ad7df82cf404c6c5851683bbc0ad4fc77f7771110738eb50011521a9a4", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0014_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0014_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0014_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0014_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0014_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0014_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0014_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 48.7491, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 251031, + "min": 0.0, + "max": 1103.1129, + "mean": 273.0689, + "median": 185.3106, + "p90": 594.4264 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 289, + "major_roads": 2616, + "schools_waterpoints": 291, + "urban_landuse": 70623, + "water_surface": 94, + "waterways": 1486 + }, + "label_counts": { + "vector_label": 16, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0016_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0016_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..2ff2294c8ea75f63d2fc05f296831ffeb45b09e3 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0016_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0016_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.41328595108398, + "lat": 23.76209004285715 + }, + "bbox": [ + 90.38872040280874, + 23.73960700270918, + 90.43785149935921, + 23.784573083005117 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0016_label_positive_jitter_packet.png", + "sha256": "f9456cc781149a87450b2053e00f83a78e2f2c442625f896e1fe5e081204df13", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0016_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0016_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0016_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0016_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0016_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0016_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0016_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 45.7206, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 238004, + "min": 76.3065, + "max": 638.9996, + "mean": 326.3244, + "median": 308.6138, + "p90": 501.7665 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 488, + "major_roads": 2747, + "schools_waterpoints": 623, + "urban_landuse": 58487, + "water_surface": 68, + "waterways": 15 + }, + "label_counts": { + "vector_label": 6, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0017_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0017_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..e470b98e652e8c7a6827df329c353a6f0d37a1c2 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0017_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0017_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.28373481520366, + "lat": 23.953307253741308 + }, + "bbox": [ + 90.25913298205771, + 23.93082421359334, + 90.30833664834961, + 23.975790293889276 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0017_label_positive_jitter_packet.png", + "sha256": "0b9052222942a546a195b67f0c28a16d2f51e2741643bffc1d51594240107c96", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0017_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0017_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0017_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0017_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0017_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0017_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0017_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 54.9011, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 252586, + "min": 13.6151, + "max": 80.3484, + "mean": 32.9411, + "median": 31.0602, + "p90": 54.8083 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 27, + "major_roads": 958, + "schools_waterpoints": 24, + "urban_landuse": 44517, + "water_surface": 221, + "waterways": 6 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0018_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0018_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..b5dba3628feaa99c6e36cd455fa798952845cac9 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0018_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0018_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.43339721351052, + "lat": 23.687618345326104 + }, + "bbox": [ + 90.4088456939195, + 23.665135305178136, + 90.45794873310153, + 23.710101385474072 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0018_label_positive_jitter_packet.png", + "sha256": "f9cb1fa69d9d114e636c91e528ecb55f2bc6ce9f5d30ce1c85bb7854b9bf071e", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0018_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0018_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0018_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0018_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0018_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0018_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0018_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 50.8848, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 246658, + "min": 0.0, + "max": 585.1046, + "mean": 153.9668, + "median": 144.5905, + "p90": 304.3674 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 164, + "major_roads": 1371, + "schools_waterpoints": 135, + "urban_landuse": 53894, + "water_surface": 122, + "waterways": 29 + }, + "label_counts": { + "vector_label": 6, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0019_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0019_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..ea26841bb7aea22629422f2c0f1cc37335b45d75 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0019_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0019_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.43427473224412, + "lat": 23.774425789745276 + }, + "bbox": [ + 90.40970685465376, + 23.75194274959731, + 90.45884260983448, + 23.796908829893244 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0019_label_positive_jitter_packet.png", + "sha256": "e671785fefc4984f7e38015fe48fc3eb92364167e1bdd08a137086f3709e20b6", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0019_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0019_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0019_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0019_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0019_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0019_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0019_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 50.1768, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 171556, + "min": 37.4376, + "max": 637.2866, + "mean": 296.0245, + "median": 284.4288, + "p90": 498.6401 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 274, + "major_roads": 1832, + "schools_waterpoints": 298, + "urban_landuse": 48220, + "water_surface": 90, + "waterways": 14 + }, + "label_counts": { + "vector_label": 2, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0020_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0020_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..a063bf273c2308a67d97a57d935328d447d8e236 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0020_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0020_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.27844796670001, + "lat": 23.961267952671914 + }, + "bbox": [ + 90.25384461468379, + 23.938784912523946, + 90.30305131871624, + 23.983750992819882 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0020_label_positive_jitter_packet.png", + "sha256": "fe65f4defb55e4c86cb7824b137f2c4e6c614592ff730397dd2c426ba14295dd", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0020_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0020_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0020_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0020_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0020_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0020_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0020_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 54.6683, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 247104, + "min": 16.5514, + "max": 80.1299, + "mean": 34.5592, + "median": 34.1842, + "p90": 55.106 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 11, + "major_roads": 724, + "schools_waterpoints": 15, + "urban_landuse": 33068, + "water_surface": 207, + "waterways": 13 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0021_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0021_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..15849e55828e89aaf8e966332f49c516d53a88f3 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0021_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0021_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.41896816192975, + "lat": 23.71136030452186 + }, + "bbox": [ + 90.39441217616672, + 23.688877264373893, + 90.44352414769278, + 23.73384334466983 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0021_label_positive_jitter_packet.png", + "sha256": "1f22ea3e811e5a0a57a0fc4eb6609b9a9e44455197045755e871a35746278abb", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0021_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0021_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0021_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0021_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0021_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0021_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0021_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 47.7095, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 257569, + "min": 0.0, + "max": 1100.6152, + "mean": 252.3669, + "median": 198.8879, + "p90": 471.1539 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 327, + "major_roads": 2514, + "schools_waterpoints": 267, + "urban_landuse": 72903, + "water_surface": 60, + "waterways": 1491 + }, + "label_counts": { + "vector_label": 14, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0022_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0022_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..2a4573504fa116092ae6f4a630e7328aa270f05f --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0022_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0022_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.40623923408225, + "lat": 23.7803023209175 + }, + "bbox": [ + 90.38167024629159, + 23.75781928076953, + 90.43080822187291, + 23.802785361065467 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0022_label_positive_jitter_packet.png", + "sha256": "6dbfb3c62e8f2c3e3a47ce38780c938d1562c74000bbe71cc9c343f28528a9b3", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0022_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0022_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0022_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0022_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0022_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0022_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0022_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 47.8546, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 242444, + "min": 79.9435, + "max": 637.2143, + "mean": 244.7112, + "median": 236.5688, + "p90": 407.9666 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 407, + "major_roads": 2180, + "schools_waterpoints": 593, + "urban_landuse": 49041, + "water_surface": 84, + "waterways": 14 + }, + "label_counts": { + "vector_label": 6, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0024_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0024_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..749e86c453ce7bdd669c5235fa705fdc3a46aca1 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0024_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0024_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.40692213696319, + "lat": 23.70759280192125 + }, + "bbox": [ + 90.38236686030643, + 23.685109761773283, + 90.43147741361994, + 23.73007584206922 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0024_label_positive_jitter_packet.png", + "sha256": "88b8b2fd29b566ebf0315124f72f4ddc033fad856f3d9237cbb2a306037cbd57", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0024_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0024_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0024_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0024_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0024_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0024_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0024_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 48.8725, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 254786, + "min": 0.0, + "max": 1101.3575, + "mean": 257.6088, + "median": 173.1058, + "p90": 592.8303 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 287, + "major_roads": 2366, + "schools_waterpoints": 277, + "urban_landuse": 72844, + "water_surface": 99, + "waterways": 1492 + }, + "label_counts": { + "vector_label": 14, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0025_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0025_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..b01306e24cd81598b263cad6fc7ba5a50abdb6d2 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0025_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0025_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.39455267031364, + "lat": 23.692403080952555 + }, + "bbox": [ + 90.37000025112138, + 23.669920040804588, + 90.4191050895059, + 23.714886121100523 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0025_label_positive_jitter_packet.png", + "sha256": "8333e708ae49ae73e725ee498f7c3392d955791fb86ad795f28fe4d223f81156", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0025_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0025_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0025_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0025_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0025_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0025_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0025_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 55.8092, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 247258, + "min": 0.0, + "max": 644.841, + "mean": 95.7166, + "median": 71.4032, + "p90": 164.4032 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 81, + "major_roads": 1426, + "schools_waterpoints": 96, + "urban_landuse": 52906, + "water_surface": 118, + "waterways": 376 + }, + "label_counts": { + "vector_label": 7, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0027_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0027_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..9ab977c6ad3569702f4615331e3b4e42fb844345 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0027_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0027_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.40359390581885, + "lat": 23.70074651529352 + }, + "bbox": [ + 90.37903991736985, + 23.678263475145553, + 90.42814789426785, + 23.72322955544149 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0027_label_positive_jitter_packet.png", + "sha256": "58c5253a8a3720bc7f50fc82fc4bb4d12dbedfe5550439a2547b04418cf5153a", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0027_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0027_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0027_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0027_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0027_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0027_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0027_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 51.2917, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 251805, + "min": 0.0, + "max": 1101.6305, + "mean": 211.3784, + "median": 132.892, + "p90": 507.8488 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 256, + "major_roads": 1997, + "schools_waterpoints": 226, + "urban_landuse": 74286, + "water_surface": 90, + "waterways": 1467 + }, + "label_counts": { + "vector_label": 12, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0029_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0029_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..ff3e54cd85828e3507bbdf0c9a1a88dc847ac3f6 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0029_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0029_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.27343675160331, + "lat": 23.86700962855891 + }, + "bbox": [ + 90.24885134123484, + 23.844526588410943, + 90.29802216197179, + 23.88949266870688 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0029_label_positive_jitter_packet.png", + "sha256": "9cdea85c36734c1202a58b250b9fc903e44afe09fd450a0a3f3519715a17506a", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0029_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0029_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0029_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0029_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0029_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0029_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0029_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 55.9624, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 253598, + "min": 13.0136, + "max": 129.2113, + "mean": 24.0233, + "median": 20.611, + "p90": 28.0906 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 71, + "major_roads": 1070, + "schools_waterpoints": 23, + "urban_landuse": 30425, + "water_surface": 169, + "waterways": 13 + }, + "label_counts": { + "vector_label": 4, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0030_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0030_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..52792373844c311571d6cb9f98b5d28f1ab698bc --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0030_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0030_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.27041657465307, + "lat": 23.878438280722403 + }, + "bbox": [ + 90.24582899383064, + 23.855955240574435, + 90.2950041554755, + 23.90092132087037 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0030_label_positive_jitter_packet.png", + "sha256": "2c0a66ff1019f083d60df881d69db7cf9e8f02edbde8f779eebb9423c1b218db", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0030_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0030_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0030_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0030_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0030_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0030_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0030_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 55.8271, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 247505, + "min": 13.0699, + "max": 34.7663, + "mean": 20.1976, + "median": 20.0339, + "p90": 23.6298 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 37, + "major_roads": 722, + "schools_waterpoints": 21, + "urban_landuse": 18110, + "water_surface": 164, + "waterways": 12 + }, + "label_counts": { + "vector_label": 4, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0033_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0033_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..1976cf94e2e83c2c2cb98dfdd219aa1efaac69a0 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0033_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0033_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.4028440116387, + "lat": 23.76833520702093 + }, + "bbox": [ + 90.37827728430891, + 23.74585216687296, + 90.4274107389685, + 23.790818247168897 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0033_label_positive_jitter_packet.png", + "sha256": "489d5ad2e5e96e0af955bbe242ed8ce1c2b36e56fc5d4c7bb0857ae214494ddf", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0033_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0033_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0033_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0033_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0033_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0033_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0033_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 47.794, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 243224, + "min": 79.9031, + "max": 587.6818, + "mean": 279.0936, + "median": 268.7977, + "p90": 442.0319 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 469, + "major_roads": 2426, + "schools_waterpoints": 713, + "urban_landuse": 50614, + "water_surface": 70, + "waterways": 10 + }, + "label_counts": { + "vector_label": 4, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0035_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0035_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..b8c065c72a0134c050575746d2638d094b399bab --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0035_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0035_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.27578115962464, + "lat": 23.80530814645964 + }, + "bbox": [ + 90.2512074436949, + 23.782825106311673, + 90.30035487555439, + 23.82779118660761 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0035_label_positive_jitter_packet.png", + "sha256": "5375a7f7fe2e2bde219aef03bbe3b804a3d5eb25571eef7c6b77b331fd2d9158", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0035_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0035_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0035_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0035_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0035_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0035_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0035_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 56.7647, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 218559, + "min": 11.2262, + "max": 52.3722, + "mean": 24.488, + "median": 23.936, + "p90": 30.0519 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 8, + "major_roads": 434, + "schools_waterpoints": 14, + "urban_landuse": 27796, + "water_surface": 192, + "waterways": 7 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0036_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0036_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..fca56ec24fed39700c180e5e04c864b4a4d52494 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0036_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0036_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.35903945901069, + "lat": 23.758215721296292 + }, + "bbox": [ + 90.33447464198369, + 23.735732681148324, + 90.38360427603769, + 23.78069876144426 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0036_label_positive_jitter_packet.png", + "sha256": "59cbff6dede099f8e1ebb90d743a9c069d490119ab5f443fd76fddf466552a48", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0036_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0036_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0036_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0036_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0036_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0036_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0036_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 52.9055, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 184160, + "min": 23.065, + "max": 552.4591, + "mean": 283.5254, + "median": 280.6637, + "p90": 435.356 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 845, + "major_roads": 2209, + "schools_waterpoints": 285, + "urban_landuse": 47287, + "water_surface": 55, + "waterways": 36 + }, + "label_counts": { + "vector_label": 2, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0038_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0038_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..12558163a33eb4f293b5da27f598bd81a1d4c09b --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0038_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0038_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.42083052184157, + "lat": 23.77935847528661 + }, + "bbox": [ + 90.39626171238737, + 23.756875435138642, + 90.44539933129576, + 23.801841515434578 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0038_label_positive_jitter_packet.png", + "sha256": "59278ecd8df3bd062cad54a5a558a9a7e99d2e303a50621a1ad9659203abfeaf", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0038_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0038_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0038_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0038_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0038_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0038_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0038_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 49.2731, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 209457, + "min": 73.8635, + "max": 636.7117, + "mean": 271.8244, + "median": 243.5157, + "p90": 472.3247 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 319, + "major_roads": 2133, + "schools_waterpoints": 572, + "urban_landuse": 55308, + "water_surface": 107, + "waterways": 21 + }, + "label_counts": { + "vector_label": 4, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0040_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0040_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..f28305b54f6748e78daa96af36361f30e0873117 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0040_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0040_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.35199199634093, + "lat": 23.810522432774782 + }, + "bbox": [ + 90.32741729366693, + 23.788039392626814, + 90.37656669901493, + 23.83300547292275 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0040_label_positive_jitter_packet.png", + "sha256": "661d4869f9e92f103b34603b989e5753a964e90a35bdc8eecb79624590428f3d", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0040_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0040_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0040_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0040_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0040_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0040_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0040_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 50.8961, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 188346, + "min": 30.8351, + "max": 1137.5056, + "mean": 332.5493, + "median": 264.981, + "p90": 694.0337 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 640, + "major_roads": 2716, + "schools_waterpoints": 336, + "urban_landuse": 62464, + "water_surface": 78, + "waterways": 37 + }, + "label_counts": { + "vector_label": 2, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0041_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0041_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..2aa16192a574dfed52593d973c66ee915a565202 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0041_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0041_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.3820098930208, + "lat": 23.700870966770523 + }, + "bbox": [ + 90.35745588115914, + 23.678387926622555, + 90.40656390488245, + 23.72335400691849 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0041_label_positive_jitter_packet.png", + "sha256": "aeb047e1e5a289aef9fd257790de90f6aa4668b58ed8e6cf6fe47219e4ed74f6", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0041_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0041_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0041_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0041_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0041_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0041_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0041_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 54.5055, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 237964, + "min": 0.0, + "max": 1059.8795, + "mean": 140.1252, + "median": 84.4138, + "p90": 434.0349 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 63, + "major_roads": 1525, + "schools_waterpoints": 178, + "urban_landuse": 67049, + "water_surface": 118, + "waterways": 1437 + }, + "label_counts": { + "vector_label": 7, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0043_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0043_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..8f71f6a3c42856c62112f7a02e83f55b489eaa73 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0043_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0043_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.40263249301235, + "lat": 23.722473209314085 + }, + "bbox": [ + 90.37807441475977, + 23.699990169166117, + 90.42719057126493, + 23.744956249462053 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0043_label_positive_jitter_packet.png", + "sha256": "69d89766c63e7e911f1752c4163ebd3893b95245262759ee953f7a588d7cbead", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0043_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0043_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0043_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0043_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0043_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0043_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0043_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 47.6616, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 251735, + "min": 0.0, + "max": 1104.2334, + "mean": 304.5453, + "median": 259.0402, + "p90": 593.9317 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 381, + "major_roads": 2762, + "schools_waterpoints": 355, + "urban_landuse": 60187, + "water_surface": 87, + "waterways": 1485 + }, + "label_counts": { + "vector_label": 19, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0044_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0044_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..b8a928ef89efcaf185fc98c146b987768c555b67 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0044_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0044_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.35107616389382, + "lat": 23.802258188933425 + }, + "bbox": [ + 90.32650302500271, + 23.779775148785458, + 90.37564930278494, + 23.824741229081393 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0044_label_positive_jitter_packet.png", + "sha256": "ad19c1b99d90a7f1a48036037cd4f2c28af2294215285d5f6e5fda1c4a78f0ce", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0044_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0044_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0044_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0044_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0044_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0044_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0044_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 50.7734, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 201476, + "min": 58.9664, + "max": 1148.0546, + "mean": 328.1422, + "median": 213.1932, + "p90": 669.4694 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 573, + "major_roads": 2861, + "schools_waterpoints": 289, + "urban_landuse": 63767, + "water_surface": 72, + "waterways": 37 + }, + "label_counts": { + "vector_label": 2, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0045_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0045_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..07168f58db26be5d230554159480896254ee5a87 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0045_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0045_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.38638814863778, + "lat": 23.748077840071605 + }, + "bbox": [ + 90.36182524432004, + 23.725594799923638, + 90.41095105295551, + 23.770560880219573 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0045_label_positive_jitter_packet.png", + "sha256": "caaaa5b9732d48484aed48a8f734e53ea7b1c656f4135c433f3c2f0bbd0bf495", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0045_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0045_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0045_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0045_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0045_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0045_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0045_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 50.4576, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 255237, + "min": 57.7258, + "max": 674.4247, + "mean": 288.0359, + "median": 272.9092, + "p90": 453.6336 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 562, + "major_roads": 2358, + "schools_waterpoints": 423, + "urban_landuse": 37384, + "water_surface": 83, + "waterways": 15 + }, + "label_counts": { + "vector_label": 8, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0046_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0046_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..feba416db248a247fc3b7fc84917d99a8994379f --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0046_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0046_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.39996203011687, + "lat": 23.725371124579308 + }, + "bbox": [ + 90.3754034059947, + 23.70288808443134, + 90.42452065423903, + 23.747854164727276 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0046_label_positive_jitter_packet.png", + "sha256": "ecfc625a1b0a90d33731e3034ddc88a10180520b76ebac460d039698dc051eec", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0046_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0046_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0046_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0046_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0046_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0046_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0046_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 47.2503, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 249821, + "min": 0.0, + "max": 1104.1298, + "mean": 315.7493, + "median": 275.0196, + "p90": 594.8394 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 336, + "major_roads": 2782, + "schools_waterpoints": 346, + "urban_landuse": 59727, + "water_surface": 85, + "waterways": 1481 + }, + "label_counts": { + "vector_label": 16, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0048_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0048_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..b7edf5d0cf9e1c6b2f2b7fbc3365c5ba81dc807d --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0048_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0048_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.40325171751566, + "lat": 23.808416067924757 + }, + "bbox": [ + 90.37867741348124, + 23.78593302777679, + 90.42782602155008, + 23.830899108072725 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0048_label_positive_jitter_packet.png", + "sha256": "00a35e1495e9b18b1429fab9eb752655c9dde45c41685f47e67ab1e37a195cf9", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0048_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0048_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0048_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0048_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0048_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0048_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0048_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 49.9416, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 227441, + "min": 1.5829, + "max": 549.9045, + "mean": 146.0651, + "median": 146.6809, + "p90": 277.2772 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 251, + "major_roads": 1901, + "schools_waterpoints": 168, + "urban_landuse": 39651, + "water_surface": 210, + "waterways": 11 + }, + "label_counts": { + "vector_label": 3, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0051_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0051_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..209fa1e5ebcd1aabca19cebd86791fd2bcc3c7ff --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0051_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0051_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.40503878557121, + "lat": 23.75009011990526 + }, + "bbox": [ + 90.38047550168245, + 23.72760707975729, + 90.42960206945996, + 23.772573160053227 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0051_label_positive_jitter_packet.png", + "sha256": "62dc5d1638cf306e9f946eab2a6f03c040b85130d96c3bfcf5568594e83258b4", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0051_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0051_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0051_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0051_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0051_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0051_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0051_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 46.6303, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 250319, + "min": 57.6962, + "max": 656.9035, + "mean": 296.8124, + "median": 286.5231, + "p90": 465.9507 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 422, + "major_roads": 2900, + "schools_waterpoints": 345, + "urban_landuse": 41684, + "water_surface": 85, + "waterways": 4 + }, + "label_counts": { + "vector_label": 3, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0052_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0052_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..b832f8b2bd64a4e218da7d19723ab6e648ed6c10 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0052_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0052_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.26454085633122, + "lat": 23.87465901589792 + }, + "bbox": [ + 90.23995399339242, + 23.85217597574995, + 90.28912771927003, + 23.897142056045887 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0052_label_positive_jitter_packet.png", + "sha256": "c5d7f4df61f02621971f557b4a17f4a5e0707a2835337380a1d325c5486b234d", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0052_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0052_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0052_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0052_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0052_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0052_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0052_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 56.0325, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 244997, + "min": 12.2216, + "max": 60.1789, + "mean": 21.3373, + "median": 20.4582, + "p90": 25.4577 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 39, + "major_roads": 741, + "schools_waterpoints": 20, + "urban_landuse": 20609, + "water_surface": 189, + "waterways": 11 + }, + "label_counts": { + "vector_label": 4, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0054_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0054_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..4d429a90dd93d86a7e2c8294c9bdeb2c37bb0bcd --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0054_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0054_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.37054336352871, + "lat": 23.741841220799863 + }, + "bbox": [ + 90.34598163534102, + 23.719358180651895, + 90.3951050917164, + 23.76432426094783 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0054_label_positive_jitter_packet.png", + "sha256": "3266268be3715031593d06f1fcb8e883b095a482f4c1054b831e5bc5eba5e906", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0054_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0054_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0054_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0054_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0054_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0054_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0054_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 52.22, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 211845, + "min": 40.2475, + "max": 751.1075, + "mean": 304.7422, + "median": 280.9477, + "p90": 493.5503 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 465, + "major_roads": 2006, + "schools_waterpoints": 357, + "urban_landuse": 53753, + "water_surface": 81, + "waterways": 59 + }, + "label_counts": { + "vector_label": 2, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0057_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0057_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..3472b649f137dc09357bb5ea839fd2203ee990e4 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0057_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0057_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.41201999359004, + "lat": 23.707097704419233 + }, + "bbox": [ + 90.38746481010787, + 23.684614664271265, + 90.4365751770722, + 23.7295807445672 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0057_label_positive_jitter_packet.png", + "sha256": "3bfb51bd2dffdbe5fb5408362df6012dfa4aecf39a6e6e8eb831fabfeaa4ac9a", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0057_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0057_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0057_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0057_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0057_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0057_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0057_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 48.2976, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 257875, + "min": 0.0, + "max": 1103.8248, + "mean": 251.4016, + "median": 186.3286, + "p90": 576.8777 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 305, + "major_roads": 2414, + "schools_waterpoints": 265, + "urban_landuse": 72528, + "water_surface": 83, + "waterways": 1489 + }, + "label_counts": { + "vector_label": 13, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0058_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0058_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..710cfab621917163e3561b29152dee38d30ca793 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0058_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0058_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.26679953807171, + "lat": 23.877074030123712 + }, + "bbox": [ + 90.24221221641028, + 23.854590989975744, + 90.29138685973314, + 23.89955707027168 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0058_label_positive_jitter_packet.png", + "sha256": "8a4b20fd1a22155c75e54f423310b14171c5fecc3586f1c728f09e614c3f1e90", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0058_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0058_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0058_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0058_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0058_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0058_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0058_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 55.6499, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 246212, + "min": 13.0488, + "max": 43.4249, + "mean": 20.6731, + "median": 20.2985, + "p90": 24.5917 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 39, + "major_roads": 703, + "schools_waterpoints": 19, + "urban_landuse": 18183, + "water_surface": 176, + "waterways": 13 + }, + "label_counts": { + "vector_label": 4, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0059_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0059_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..8dec98de93dd6bfe0d42300c370428e14574e403 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0059_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0059_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.27802444672596, + "lat": 23.87752893843282 + }, + "bbox": [ + 90.25343703864965, + 23.855045898284853, + 90.30261185480228, + 23.90001197858079 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0059_label_positive_jitter_packet.png", + "sha256": "266414d689831805c1b81b175cf598bdd14c33917ad7a12ff1ef158bef665db7", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0059_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0059_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0059_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0059_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0059_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0059_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0059_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 55.4765, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 255454, + "min": 12.9044, + "max": 31.8268, + "mean": 19.2893, + "median": 19.6704, + "p90": 23.104 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 38, + "major_roads": 793, + "schools_waterpoints": 21, + "urban_landuse": 19100, + "water_surface": 146, + "waterways": 7 + }, + "label_counts": { + "vector_label": 4, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0060_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0060_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..babc9d263802f8d2d8e2024530b726e8800a3428 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0060_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0060_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.37703712928081, + "lat": 23.700822047547884 + }, + "bbox": [ + 90.35248312662219, + 23.678339007399916, + 90.40159113193943, + 23.723305087695852 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0060_label_positive_jitter_packet.png", + "sha256": "f3e55635130becb337855d181763c9a012ee9bc9baeb733acc59e35a975b93f0", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0060_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0060_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0060_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0060_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0060_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0060_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0060_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 54.8741, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 235871, + "min": 11.5622, + "max": 959.4334, + "mean": 115.6703, + "median": 63.7233, + "p90": 324.972 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 42, + "major_roads": 1198, + "schools_waterpoints": 140, + "urban_landuse": 60270, + "water_surface": 127, + "waterways": 587 + }, + "label_counts": { + "vector_label": 7, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0061_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0061_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..2c34e67624ea733ae9b105959fda9e309726acd8 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0061_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0061_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.38404914791903, + "lat": 23.753461857626753 + }, + "bbox": [ + 90.35948522793409, + 23.730978817478785, + 90.40861306790397, + 23.77594489777472 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0061_label_positive_jitter_packet.png", + "sha256": "893a050209266b3ffd063a3e7c61682e978582c9f346184e92ab0e2b06e54e09", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0061_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0061_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0061_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0061_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0061_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0061_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0061_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 49.779, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 255226, + "min": 57.4599, + "max": 552.7966, + "mean": 290.8294, + "median": 273.4496, + "p90": 443.6456 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 707, + "major_roads": 2319, + "schools_waterpoints": 507, + "urban_landuse": 40162, + "water_surface": 72, + "waterways": 25 + }, + "label_counts": { + "vector_label": 3, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0062_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0062_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..87a5c8a1a2741d1f6ff1be1f80b67f4480208987 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0062_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0062_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.40037864509792, + "lat": 23.733115744724213 + }, + "bbox": [ + 90.37581856172287, + 23.710632704576245, + 90.42493872847297, + 23.75559878487218 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0062_label_positive_jitter_packet.png", + "sha256": "0636c35c6221c51816cf67058244d6d491b9b0f6b8d807071dbfbbbc20b04a13", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0062_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0062_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0062_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0062_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0062_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0062_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0062_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 46.7813, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 256732, + "min": 57.7468, + "max": 1104.2546, + "mean": 341.148, + "median": 303.535, + "p90": 591.7599 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 406, + "major_roads": 2995, + "schools_waterpoints": 383, + "urban_landuse": 55629, + "water_surface": 92, + "waterways": 1460 + }, + "label_counts": { + "vector_label": 11, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0064_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0064_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..70141618ce75bf439040701b187adf18a0fda4f7 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0064_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0064_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.37331575603032, + "lat": 23.7576190710903 + }, + "bbox": [ + 90.34875105160258, + 23.735136030942332, + 90.39788046045807, + 23.780102111238268 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0064_label_positive_jitter_packet.png", + "sha256": "9c0a269cc5da1a511794cf3df656a0d1ce600d5fd7cbdad097df24d5431e90a6", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0064_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0064_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0064_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0064_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0064_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0064_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0064_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 49.6551, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 232656, + "min": 59.4903, + "max": 551.4088, + "mean": 312.0024, + "median": 301.5963, + "p90": 446.2621 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 908, + "major_roads": 2413, + "schools_waterpoints": 316, + "urban_landuse": 47524, + "water_surface": 64, + "waterways": 30 + }, + "label_counts": { + "vector_label": 2, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0065_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0065_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..bab9417aaebad38aa5dffe5b21b949719985768c --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0065_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0065_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.27099068007796, + "lat": 23.8622655027008 + }, + "bbox": [ + 90.24640617028264, + 23.839782462552833, + 90.29557518987328, + 23.88474854284877 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0065_label_positive_jitter_packet.png", + "sha256": "f041f8584574a8f59c59b114ac6603994acdeb4db50aa77f235aa575344ccaa1", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0065_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0065_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0065_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0065_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0065_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0065_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0065_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 55.9305, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 252581, + "min": 14.083, + "max": 129.2547, + "mean": 27.5732, + "median": 21.1805, + "p90": 43.5435 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 72, + "major_roads": 1053, + "schools_waterpoints": 25, + "urban_landuse": 35844, + "water_surface": 166, + "waterways": 11 + }, + "label_counts": { + "vector_label": 4, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0067_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0067_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..f32cd9e44eaf27a41e2636c058bc5b1d85598153 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0067_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0067_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.40931905769561, + "lat": 23.709069226891593 + }, + "bbox": [ + 90.3847635031688, + 23.686586186743625, + 90.43387461222243, + 23.73155226703956 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0067_label_positive_jitter_packet.png", + "sha256": "0298c20ac3737cdd9286bfdb05eb46a628bf56141c3ffec70430e5d410d0e288", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0067_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0067_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0067_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0067_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0067_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0067_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0067_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 48.0851, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 256283, + "min": 0.0, + "max": 1100.9359, + "mean": 261.1663, + "median": 192.8734, + "p90": 590.8994 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 307, + "major_roads": 2444, + "schools_waterpoints": 279, + "urban_landuse": 72227, + "water_surface": 91, + "waterways": 1491 + }, + "label_counts": { + "vector_label": 14, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0069_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0069_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..1678c7ca2c151f93883531981a9cb23a844a43f0 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0069_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0069_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.39147960113053, + "lat": 23.747703119581963 + }, + "bbox": [ + 90.3669167674907, + 23.725220079433996, + 90.41604243477036, + 23.77018615972993 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0069_label_positive_jitter_packet.png", + "sha256": "da3541ba07909f9a5d7014643fe9ba8b4dfae579556613dd84d75e1038c28713", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0069_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0069_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0069_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0069_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0069_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0069_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0069_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 49.83, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 255061, + "min": 57.7189, + "max": 700.5491, + "mean": 282.3826, + "median": 274.3151, + "p90": 446.4274 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 489, + "major_roads": 2473, + "schools_waterpoints": 405, + "urban_landuse": 34779, + "water_surface": 80, + "waterways": 4 + }, + "label_counts": { + "vector_label": 8, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0070_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0070_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..c427e3c8b41b83d0cea492a99aa81a72362d67f3 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0070_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0070_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.41090582620355, + "lat": 23.712227152061022 + }, + "bbox": [ + 90.38634967726466, + 23.689744111913054, + 90.43546197514243, + 23.73471019220899 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0070_label_positive_jitter_packet.png", + "sha256": "74a037a04bc6cf8c212034b4fbd9673e7a2d1ab8ee05786fc0c5d2b2b4e68ca0", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0070_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0070_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0070_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0070_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0070_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0070_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0070_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 47.3339, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 257286, + "min": 0.0, + "max": 1101.416, + "mean": 267.6495, + "median": 206.6964, + "p90": 585.397 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 335, + "major_roads": 2629, + "schools_waterpoints": 296, + "urban_landuse": 71054, + "water_surface": 79, + "waterways": 1489 + }, + "label_counts": { + "vector_label": 14, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0072_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0072_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..9fabcf6bd222287e78e0ceb2c88699d42bf17464 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0072_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0072_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.28843518882884, + "lat": 23.93880463648807 + }, + "bbox": [ + 90.26383612102323, + 23.9163215963401, + 90.31303425663445, + 23.961287676636037 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0072_label_positive_jitter_packet.png", + "sha256": "7a7c0ae543a88c1fe7b4b47921918c70aff87f045af4196dc9df5b33465d4364", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0072_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0072_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0072_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0072_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0072_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0072_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0072_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 55.8932, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 258022, + "min": 13.8527, + "max": 80.1569, + "mean": 27.5509, + "median": 21.6, + "p90": 45.6594 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 28, + "major_roads": 1088, + "schools_waterpoints": 30, + "urban_landuse": 54239, + "water_surface": 151, + "waterways": 8 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0073_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0073_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..8726a8df41e444f628bb4608981715bc7ff69a86 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0073_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0073_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.41286741744193, + "lat": 23.709894732304015 + }, + "bbox": [ + 90.3883117075413, + 23.687411692156047, + 90.43742312734256, + 23.732377772451983 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0073_label_positive_jitter_packet.png", + "sha256": "7a413c00a5581e05985d6345d059c531d47ad70c918d86ba417ae9c917d095b7", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0073_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0073_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0073_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0073_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0073_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0073_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0073_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 47.6237, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 257940, + "min": 0.0, + "max": 1102.8309, + "mean": 258.2906, + "median": 197.1015, + "p90": 565.939 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 319, + "major_roads": 2516, + "schools_waterpoints": 274, + "urban_landuse": 72798, + "water_surface": 76, + "waterways": 1490 + }, + "label_counts": { + "vector_label": 14, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0075_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0075_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..9c273155baeaa1bce34dc7036b543552aac012e7 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0075_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0075_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.41246258576301, + "lat": 23.71301169539793 + }, + "bbox": [ + 90.38790628913453, + 23.690528655249963, + 90.43701888239148, + 23.7354947355459 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0075_label_positive_jitter_packet.png", + "sha256": "8a76af08620df2b756394fd5545aeb94fd5544fe671c8d653d33a7d641d23e8a", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0075_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0075_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0075_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0075_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0075_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0075_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0075_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 47.2967, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 257787, + "min": 0.0, + "max": 1102.8076, + "mean": 266.2654, + "median": 208.3336, + "p90": 572.0255 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 339, + "major_roads": 2634, + "schools_waterpoints": 291, + "urban_landuse": 70232, + "water_surface": 73, + "waterways": 1490 + }, + "label_counts": { + "vector_label": 14, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0076_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0076_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..7d4d99537f8079f3343e1e249b030b2c40901db8 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0076_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0076_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.42846635655171, + "lat": 23.786196898894808 + }, + "bbox": [ + 90.40389625479085, + 23.76371385874684, + 90.45303645831257, + 23.808679939042776 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0076_label_positive_jitter_packet.png", + "sha256": "e9dcbec6a69d176f03dff56f0a7de01df550c0f446984ef7f44d759237dfe284", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0076_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0076_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0076_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0076_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0076_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0076_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0076_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 51.7645, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 178276, + "min": 6.7447, + "max": 637.3355, + "mean": 238.4745, + "median": 165.6339, + "p90": 451.9915 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 241, + "major_roads": 1772, + "schools_waterpoints": 499, + "urban_landuse": 47178, + "water_surface": 99, + "waterways": 25 + }, + "label_counts": { + "vector_label": 7, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0077_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0077_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..37c7839f6db3e51ded492f524ddadfc4bc88722e --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0077_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0077_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.27964876970732, + "lat": 23.94965267026231 + }, + "bbox": [ + 90.25504763361978, + 23.927169630114342, + 90.30424990579486, + 23.972135710410278 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0077_label_positive_jitter_packet.png", + "sha256": "31f82ce0e6262d3a76368c544186cacd67ffe1e77e33ee9533aa1e21b8ccc518", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0077_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0077_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0077_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0077_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0077_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0077_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0077_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 54.9808, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 250593, + "min": 14.0305, + "max": 79.7437, + "mean": 34.4042, + "median": 33.3327, + "p90": 54.92 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 29, + "major_roads": 1008, + "schools_waterpoints": 28, + "urban_landuse": 48377, + "water_surface": 234, + "waterways": 8 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0078_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0078_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..a955898fe9d77b1611bc6becbc94bd708b4466a5 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0078_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0078_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.40661944054747, + "lat": 23.783408704399186 + }, + "bbox": [ + 90.38204986575069, + 23.760925664251218, + 90.43118901534426, + 23.805891744547154 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0078_label_positive_jitter_packet.png", + "sha256": "6db5162d7044f487fc77275be15ff5b0efd8bb4d61598594520e1c1d18f8c74a", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0078_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0078_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0078_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0078_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0078_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0078_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0078_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 48.0294, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 241692, + "min": 8.4526, + "max": 636.7549, + "mean": 238.0085, + "median": 228.9629, + "p90": 402.7893 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 373, + "major_roads": 2146, + "schools_waterpoints": 565, + "urban_landuse": 48444, + "water_surface": 91, + "waterways": 14 + }, + "label_counts": { + "vector_label": 7, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0079_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0079_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..4b843989670cb161afd6e93f3d71f50cef1840ad --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0079_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0079_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.38144167806799, + "lat": 23.740252779840127 + }, + "bbox": [ + 90.35688024937122, + 23.71776973969216, + 90.40600310676476, + 23.762735819988094 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0079_label_positive_jitter_packet.png", + "sha256": "8206ba2d3807caded600ff2f5c1601aecbefb0bdfd476f4cac50161cc751a76c", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0079_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0079_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0079_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0079_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0079_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0079_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0079_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 50.5272, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 245771, + "min": 57.6874, + "max": 1057.1361, + "mean": 313.0313, + "median": 275.1845, + "p90": 529.7521 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 477, + "major_roads": 2318, + "schools_waterpoints": 440, + "urban_landuse": 53260, + "water_surface": 84, + "waterways": 759 + }, + "label_counts": { + "vector_label": 11, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0080_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0080_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..182c3f6d9876a0e6b71eda9c18305194386ba2f2 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0080_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0080_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.40708870536321, + "lat": 23.805005731638115 + }, + "bbox": [ + 90.38251504665334, + 23.782522691490147, + 90.43166236407308, + 23.827488771786083 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0080_label_positive_jitter_packet.png", + "sha256": "6006e72557dba5e646f5a7e8e2a2c9518193c846342113050fdaeb9788d431cb", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0080_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0080_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0080_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0080_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0080_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0080_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0080_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 49.2613, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 232344, + "min": 1.7561, + "max": 598.7267, + "mean": 160.567, + "median": 152.4848, + "p90": 282.1854 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 323, + "major_roads": 1826, + "schools_waterpoints": 314, + "urban_landuse": 44202, + "water_surface": 194, + "waterways": 11 + }, + "label_counts": { + "vector_label": 5, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0083_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0083_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..d1e37098dadec15b2a28bae84c6b8dbd556a366b --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0083_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0083_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.37845766090582, + "lat": 23.739822610961596 + }, + "bbox": [ + 90.35389631331029, + 23.71733957081363, + 90.40301900850136, + 23.762305651109564 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0083_label_positive_jitter_packet.png", + "sha256": "9564dd589f6adf773f4a441891b3596300ef8dd198598104e93c3e200e400839", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0083_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0083_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0083_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0083_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0083_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0083_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0083_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 50.8309, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 236385, + "min": 56.326, + "max": 962.0536, + "mean": 311.6316, + "median": 279.8003, + "p90": 523.7067 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 456, + "major_roads": 2236, + "schools_waterpoints": 403, + "urban_landuse": 52961, + "water_surface": 89, + "waterways": 493 + }, + "label_counts": { + "vector_label": 12, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0085_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0085_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..8302a161f914539b6b5ccce25d42cc471ad186b5 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0085_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0085_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.40665830365366, + "lat": 23.78383400270633 + }, + "bbox": [ + 90.38208864848143, + 23.761350962558364, + 90.43122795882589, + 23.8063170428543 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0085_label_positive_jitter_packet.png", + "sha256": "775f217709d15ff75e5c8d7bbfe91d846505669404a5f0c654122d7aa6132be0", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0085_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0085_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0085_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0085_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0085_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0085_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0085_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 48.1236, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 241463, + "min": 7.7438, + "max": 637.5632, + "mean": 236.3832, + "median": 227.1154, + "p90": 400.895 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 371, + "major_roads": 2139, + "schools_waterpoints": 565, + "urban_landuse": 48121, + "water_surface": 93, + "waterways": 14 + }, + "label_counts": { + "vector_label": 7, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0086_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0086_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..7c003238022b01276a1bebcd0311f54922113507 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0086_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0086_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.39815372720214, + "lat": 23.726586833031185 + }, + "bbox": [ + 90.37359487405554, + 23.704103792883217, + 90.42271258034874, + 23.749069873179153 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0086_label_positive_jitter_packet.png", + "sha256": "c74cb0d8fdca5cb7c692b35e554b4802379d356fce68ad7881ad5944e882a002", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0086_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0086_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0086_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0086_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0086_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0086_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0086_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 47.1059, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 248560, + "min": 0.0, + "max": 1103.0343, + "mean": 319.8726, + "median": 279.4813, + "p90": 595.6069 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 330, + "major_roads": 2754, + "schools_waterpoints": 342, + "urban_landuse": 60512, + "water_surface": 83, + "waterways": 1481 + }, + "label_counts": { + "vector_label": 16, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0087_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0087_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..b94d0f5ac846fd33293a692e983cd8276bbba615 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0087_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0087_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.41861164086919, + "lat": 23.790298510069945 + }, + "bbox": [ + 90.39404076376385, + 23.767815469921977, + 90.44318251797452, + 23.812781550217913 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0087_label_positive_jitter_packet.png", + "sha256": "bc70662acac7154c29013617761844b6ad36dd97905c6a8531f008d2801b842e", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0087_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0087_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0087_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0087_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0087_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0087_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0087_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 50.1739, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 212251, + "min": 6.5336, + "max": 637.4575, + "mean": 216.8734, + "median": 166.6246, + "p90": 424.8727 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 274, + "major_roads": 1885, + "schools_waterpoints": 529, + "urban_landuse": 49794, + "water_surface": 143, + "waterways": 17 + }, + "label_counts": { + "vector_label": 7, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0088_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0088_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..154c50fc41f5d5df098701011c06fa9c62515e7d --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0088_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0088_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.40059413489558, + "lat": 23.725278951011724 + }, + "bbox": [ + 90.37603552813715, + 23.702795910863756, + 90.42515274165402, + 23.74776199115969 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0088_label_positive_jitter_packet.png", + "sha256": "61f735ea668c1920146c09523bea6a8fec5b16f7ec3314cac200e3366778e2ec", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0088_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0088_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0088_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0088_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0088_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0088_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0088_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 47.227, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 250150, + "min": 0.0, + "max": 1103.9844, + "mean": 316.1129, + "median": 276.1101, + "p90": 594.7688 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 347, + "major_roads": 2789, + "schools_waterpoints": 345, + "urban_landuse": 59360, + "water_surface": 84, + "waterways": 1481 + }, + "label_counts": { + "vector_label": 16, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0089_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0089_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..2c69cff1f5aba773a81a7fc5ffc265a56616fa17 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0089_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0089_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.37252241096587, + "lat": 23.75443832514009 + }, + "bbox": [ + 90.34795830674312, + 23.73195528499212, + 90.39708651518862, + 23.776921365288057 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0089_label_positive_jitter_packet.png", + "sha256": "327c26ee28ec910e60bb80d5021ec6e3449366d97cef0d6ad7b9f614574cc7ad", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0089_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0089_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0089_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0089_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0089_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0089_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0089_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 50.2744, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 227992, + "min": 52.2343, + "max": 553.2908, + "mean": 307.4797, + "median": 294.3361, + "p90": 448.0049 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 903, + "major_roads": 2415, + "schools_waterpoints": 333, + "urban_landuse": 47591, + "water_surface": 61, + "waterways": 33 + }, + "label_counts": { + "vector_label": 2, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0091_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0091_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..65eb444c7cc4b6e6227e262140d7d278f6ce807e --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0091_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0091_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.41073555124919, + "lat": 23.71071349877395 + }, + "bbox": [ + 90.38617968723615, + 23.68823045862598, + 90.43529141526223, + 23.733196538921916 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0091_label_positive_jitter_packet.png", + "sha256": "3b46d5fe607d215efcee2ae703412302e3e1cbb8c4bd55fcfc55df28d4b8a9b9", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0091_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0091_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0091_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0091_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0091_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0091_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0091_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 47.5247, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 257172, + "min": 0.0, + "max": 1105.2153, + "mean": 264.3387, + "median": 200.6686, + "p90": 586.2678 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 326, + "major_roads": 2563, + "schools_waterpoints": 287, + "urban_landuse": 72330, + "water_surface": 79, + "waterways": 1489 + }, + "label_counts": { + "vector_label": 14, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0092_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0092_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..0074628cb16f2a75dab11e2f9d2c42e87fd150b2 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0092_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0092_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.39963295554669, + "lat": 23.727747304113702 + }, + "bbox": [ + 90.37507388376739, + 23.705264263965734, + 90.424192027326, + 23.75023034426167 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0092_label_positive_jitter_packet.png", + "sha256": "08245316fb75df4fa40258f6ab54ffbaee79d74a26bc5d86e63113ad8329bdbb", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0092_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0092_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0092_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0092_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0092_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0092_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0092_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 46.9739, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 249176, + "min": 0.0, + "max": 1104.7249, + "mean": 326.5322, + "median": 290.5433, + "p90": 595.1115 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 355, + "major_roads": 2829, + "schools_waterpoints": 357, + "urban_landuse": 57784, + "water_surface": 84, + "waterways": 1481 + }, + "label_counts": { + "vector_label": 16, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0094_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0094_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..af7ffea6309c4477cb2ba4d6b929d48f9995835f --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0094_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0094_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.38120913141913, + "lat": 23.709331875884832 + }, + "bbox": [ + 90.35665352745818, + 23.686848835736864, + 90.40576473538007, + 23.7318149160328 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0094_label_positive_jitter_packet.png", + "sha256": "d8568f0d7f720161c64e02a5bc6d445859ae88167ef38f525d6ef5d07e2ed98a", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0094_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0094_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0094_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0094_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0094_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0094_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0094_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 52.453, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 234781, + "min": 0.0, + "max": 1058.0027, + "mean": 198.4015, + "median": 117.3561, + "p90": 545.6689 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 82, + "major_roads": 1769, + "schools_waterpoints": 236, + "urban_landuse": 72509, + "water_surface": 116, + "waterways": 1294 + }, + "label_counts": { + "vector_label": 11, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0095_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0095_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..9170b661df0702756707ce7ab1dd9f7643acf3dd --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0095_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0095_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.36834866913024, + "lat": 23.760903002964398 + }, + "bbox": [ + 90.34378334491618, + 23.73841996281643, + 90.39291399334431, + 23.783386043112365 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0095_label_positive_jitter_packet.png", + "sha256": "3381f7cb3f4c012ef023902654a7d51ce2c0c14ebf2ad34e08ab16d9de9f8d05", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0095_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0095_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0095_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0095_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0095_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0095_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0095_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 50.3295, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 220173, + "min": 54.5259, + "max": 552.263, + "mean": 306.5696, + "median": 298.3285, + "p90": 443.9734 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 934, + "major_roads": 2400, + "schools_waterpoints": 312, + "urban_landuse": 49266, + "water_surface": 59, + "waterways": 36 + }, + "label_counts": { + "vector_label": 2, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0097_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0097_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..bce068a3fe73fd14bd15b4384738087e9d1059ca --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0097_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0097_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.3870442993142, + "lat": 23.725077886489775 + }, + "bbox": [ + 90.36248573043217, + 23.702594846341807, + 90.41160286819623, + 23.747560926637743 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0097_label_positive_jitter_packet.png", + "sha256": "71694978ca8091fb375067267fa6e18a4d23e404099a3e5c4e792ab3e8ccedd1", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0097_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0097_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0097_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0097_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0097_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0097_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0097_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 49.6656, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 240970, + "min": 0.0, + "max": 1102.025, + "mean": 289.8205, + "median": 236.2853, + "p90": 587.1017 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 241, + "major_roads": 2257, + "schools_waterpoints": 396, + "urban_landuse": 68406, + "water_surface": 78, + "waterways": 1493 + }, + "label_counts": { + "vector_label": 17, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0099_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0099_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..96ca0e8d5e5fbd885afa84e402bc52d7a63845dd --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0099_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0099_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.39804748143972, + "lat": 23.714161593892502 + }, + "bbox": [ + 90.37349096833235, + 23.691678553744534, + 90.42260399454709, + 23.73664463404047 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0099_label_positive_jitter_packet.png", + "sha256": "f9f5100b5cd629af85dbb1659cca7ed9fed9bd32f60fe15630c2060a085a3ebe", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0099_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0099_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0099_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0099_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0099_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0099_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0099_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 49.1882, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 249283, + "min": 0.0, + "max": 1101.0269, + "mean": 269.231, + "median": 164.5023, + "p90": 595.2355 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 217, + "major_roads": 2569, + "schools_waterpoints": 264, + "urban_landuse": 72571, + "water_surface": 92, + "waterways": 1486 + }, + "label_counts": { + "vector_label": 16, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0100_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0100_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..2272fcc6fff08dc1ec4cb0fd5b2f3d6be70a7afa --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0100_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0100_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.41439036290097, + "lat": 23.781300386607445 + }, + "bbox": [ + 90.38982118651907, + 23.758817346459477, + 90.43895953928288, + 23.803783426755412 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0100_label_positive_jitter_packet.png", + "sha256": "ee8dc499bd624ba05ef5fcc807ee051751319fd93aae084aeef85ab29c90f39a", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0100_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0100_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0100_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0100_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0100_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0100_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0100_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 48.0535, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 227764, + "min": 79.9392, + "max": 636.6258, + "mean": 263.6958, + "median": 241.0255, + "p90": 461.1877 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 298, + "major_roads": 2218, + "schools_waterpoints": 561, + "urban_landuse": 55898, + "water_surface": 106, + "waterways": 15 + }, + "label_counts": { + "vector_label": 6, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0102_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0102_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..c8c879a62b4b2bb2503eac4e865e88a95b8a753f --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0102_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0102_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.41060809351542, + "lat": 23.70867738357924 + }, + "bbox": [ + 90.38605261273754, + 23.68619434343127, + 90.4351635742933, + 23.731160423727207 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0102_label_positive_jitter_packet.png", + "sha256": "053ec6242b8f5ada4f70051c9bae0b1411249fd34839c773920c9b9c2a00c02e", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0102_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0102_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0102_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0102_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0102_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0102_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0102_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 48.0182, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 257087, + "min": 0.0, + "max": 1103.6161, + "mean": 258.4465, + "median": 192.5107, + "p90": 586.7864 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 310, + "major_roads": 2469, + "schools_waterpoints": 275, + "urban_landuse": 72499, + "water_surface": 87, + "waterways": 1489 + }, + "label_counts": { + "vector_label": 14, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0103_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0103_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..0209923f3e1778a1b4e2e2a32cea7239379ee975 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0103_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0103_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.37857844767308, + "lat": 23.74864112486077 + }, + "bbox": [ + 90.35401543710867, + 23.726158084712804, + 90.40314145823749, + 23.77112416500874 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0103_label_positive_jitter_packet.png", + "sha256": "5eabe30a812f12b23d6d092d1b1f780fcd25cfa4314fd2b08379bd1dfc746575", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0103_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0103_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0103_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0103_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0103_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0103_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0103_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 51.0348, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 242980, + "min": 57.4808, + "max": 656.152, + "mean": 301.8912, + "median": 286.3388, + "p90": 458.7177 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 701, + "major_roads": 2283, + "schools_waterpoints": 339, + "urban_landuse": 42895, + "water_surface": 83, + "waterways": 28 + }, + "label_counts": { + "vector_label": 7, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0105_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0105_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..95a24ce2d563120e1a54891669e44778297214ce --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0105_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0105_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.38392650553429, + "lat": 23.70047324341996 + }, + "bbox": [ + 90.35937256849446, + 23.677990203271992, + 90.40848044257412, + 23.722956283567928 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0105_label_positive_jitter_packet.png", + "sha256": "1af7ea0f38f415a0f64c504b4893908d38d441f490b641b01fd1502046ba43ad", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0105_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0105_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0105_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0105_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0105_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0105_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0105_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 54.4195, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 240253, + "min": 0.0, + "max": 1059.7207, + "mean": 145.6708, + "median": 87.5684, + "p90": 438.0199 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 62, + "major_roads": 1588, + "schools_waterpoints": 176, + "urban_landuse": 69144, + "water_surface": 111, + "waterways": 1444 + }, + "label_counts": { + "vector_label": 7, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0106_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0106_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..06f45f8154c9ae2cfd600f8d307bfda05a2a79f4 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0106_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0106_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.38915847343416, + "lat": 23.73050268444863 + }, + "bbox": [ + 90.36459888248537, + 23.708019644300663, + 90.41371806438296, + 23.7529857245966 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0106_label_positive_jitter_packet.png", + "sha256": "48471a5e8002f6277cc2029dfcd9e1aca1c3e65ea6196fce3100e2da520ccfb0", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0106_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0106_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0106_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0106_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0106_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0106_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0106_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 49.2272, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 250495, + "min": 4.2665, + "max": 1100.3676, + "mean": 318.3695, + "median": 273.6092, + "p90": 592.6617 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 357, + "major_roads": 2481, + "schools_waterpoints": 444, + "urban_landuse": 64383, + "water_surface": 82, + "waterways": 1488 + }, + "label_counts": { + "vector_label": 17, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0107_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0107_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..f0242ed2452691f76ed52df4332cffef85236d0d --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0107_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0107_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.39986358452141, + "lat": 23.737480371452996 + }, + "bbox": [ + 90.37530267848274, + 23.714997331305028, + 90.42442449056009, + 23.759963411600964 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0107_label_positive_jitter_packet.png", + "sha256": "7c136277ac830fc351b08f76af411b5dc4510151e6e9402e1ca443918738f6a2", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0107_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0107_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0107_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0107_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0107_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0107_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0107_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 47.239, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 257927, + "min": 57.493, + "max": 1103.3364, + "mean": 339.1736, + "median": 295.2634, + "p90": 590.9634 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 423, + "major_roads": 3004, + "schools_waterpoints": 432, + "urban_landuse": 50967, + "water_surface": 94, + "waterways": 1109 + }, + "label_counts": { + "vector_label": 11, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0108_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0108_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..558d5bb1513b6376aa12b2b95b8162b4f358cdd0 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0108_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0108_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.38378282626142, + "lat": 23.718156296237208 + }, + "bbox": [ + 90.3592255610083, + 23.69567325608924, + 90.40834009151455, + 23.740639336385176 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0108_label_positive_jitter_packet.png", + "sha256": "068bb1c5fdd344e5046cd913029434754fc8aa9c2c4189239d82a219e247efdd", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0108_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0108_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0108_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0108_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0108_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0108_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0108_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 51.7193, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 236602, + "min": 0.0, + "max": 1062.6448, + "mean": 243.6165, + "median": 148.229, + "p90": 566.2864 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 162, + "major_roads": 2091, + "schools_waterpoints": 313, + "urban_landuse": 72220, + "water_surface": 99, + "waterways": 1494 + }, + "label_counts": { + "vector_label": 13, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0109_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0109_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..7ac59a0d0fba68f4c08dcab65bd71877547d683d --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0109_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0109_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.41222367269548, + "lat": 23.731242664275452 + }, + "bbox": [ + 90.38766394230608, + 23.708759624127484, + 90.43678340308487, + 23.75372570442342 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0109_label_positive_jitter_packet.png", + "sha256": "0e0a8ece2bc4b98a98065e7a49ef95452656f2630f720b2f97a6a38aef9f157a", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0109_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0109_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0109_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0109_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0109_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0109_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0109_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 46.8737, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 257224, + "min": 57.5238, + "max": 1103.238, + "mean": 336.9091, + "median": 306.0888, + "p90": 580.0793 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 437, + "major_roads": 3004, + "schools_waterpoints": 352, + "urban_landuse": 56973, + "water_surface": 86, + "waterways": 1491 + }, + "label_counts": { + "vector_label": 15, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0110_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0110_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..0699193d25773d0e81f98d5108ea490233b435c1 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0110_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0110_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.40947790681757, + "lat": 23.709320746923854 + }, + "bbox": [ + 90.38492230495126, + 23.686837706775886, + 90.43403350868388, + 23.731803787071822 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0110_label_positive_jitter_packet.png", + "sha256": "49de68c4fc54303b513cf8d94b9e2784538d12a12ab6f2fdaaa5defea29a5fa0", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0110_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0110_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0110_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0110_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0110_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0110_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0110_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 47.9854, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 256431, + "min": 0.0, + "max": 1102.8156, + "mean": 261.8015, + "median": 193.8973, + "p90": 590.4619 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 311, + "major_roads": 2459, + "schools_waterpoints": 283, + "urban_landuse": 72272, + "water_surface": 90, + "waterways": 1490 + }, + "label_counts": { + "vector_label": 14, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0111_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0111_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..f22278f0d3693f6e1aa809df6a2128a08d3e6774 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0111_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0111_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.37179938898564, + "lat": 23.71951656028355 + }, + "bbox": [ + 90.34724186757634, + 23.697033520135584, + 90.39635691039493, + 23.74199960043152 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0111_label_positive_jitter_packet.png", + "sha256": "d9cca6cfa19c0d771f1f48e01fad39264bd244bd1f27d059fd2ca1e0b3c0173b", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0111_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0111_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0111_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0111_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0111_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0111_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0111_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 53.4656, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 217249, + "min": 18.7696, + "max": 770.0357, + "mean": 200.2404, + "median": 131.7246, + "p90": 499.3863 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 120, + "major_roads": 1339, + "schools_waterpoints": 254, + "urban_landuse": 62814, + "water_surface": 101, + "waterways": 63 + }, + "label_counts": { + "vector_label": 4, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0112_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0112_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..b0b5f5f3ed67341e3e374c6f4e89177e9e211ddd --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0112_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0112_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.40046341370811, + "lat": 23.736313775143188 + }, + "bbox": [ + 90.37590272757389, + 23.71383073499522, + 90.42502409984233, + 23.758796815291156 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0112_label_positive_jitter_packet.png", + "sha256": "d47828a310226e447c2a01412c73485b3d923c7969cc44fea2e20de4554ece4c", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0112_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0112_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0112_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0112_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0112_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0112_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0112_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 47.0023, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 258018, + "min": 57.6626, + "max": 1101.4225, + "mean": 341.8292, + "median": 298.8664, + "p90": 591.1962 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 421, + "major_roads": 3058, + "schools_waterpoints": 437, + "urban_landuse": 52663, + "water_surface": 95, + "waterways": 1184 + }, + "label_counts": { + "vector_label": 11, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0114_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0114_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..ff28b514f83f1842fad04477828a02673b8076d2 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0114_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0114_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.25988361681407, + "lat": 23.805006859746566 + }, + "bbox": [ + 90.23530995789075, + 23.782523819598598, + 90.28445727573738, + 23.827489899894534 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0114_label_positive_jitter_packet.png", + "sha256": "7e1237847a7fe88611fab9414a0b13218721a76479c6647a2f6fead661a15c72", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0114_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0114_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0114_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0114_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0114_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0114_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0114_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 55.8409, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 225321, + "min": 12.9685, + "max": 51.653, + "mean": 25.5647, + "median": 25.3469, + "p90": 30.8758 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 8, + "major_roads": 389, + "schools_waterpoints": 11, + "urban_landuse": 24613, + "water_surface": 170, + "waterways": 6 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0117_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0117_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..f842a4326b3c7945e2cf0909c5542cae79959b79 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0117_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0117_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.4139650089697, + "lat": 23.703517628866713 + }, + "bbox": [ + 90.38941049916225, + 23.681034588718745, + 90.43851951877714, + 23.72600066901468 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0117_label_positive_jitter_packet.png", + "sha256": "5913894930bf117fb066d2073cb87f14cb64c425ed57b57d994bad49bacf81cb", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0117_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0117_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0117_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0117_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0117_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0117_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0117_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 48.7333, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 258101, + "min": 0.0, + "max": 1104.1082, + "mean": 235.0601, + "median": 168.4379, + "p90": 516.1612 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 304, + "major_roads": 2213, + "schools_waterpoints": 249, + "urban_landuse": 72695, + "water_surface": 83, + "waterways": 1491 + }, + "label_counts": { + "vector_label": 10, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0119_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0119_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..83e92cd63b96e1c7875ff120ab30ace3ef68e956 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0119_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0119_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.38522920064891, + "lat": 23.739080478268995 + }, + "bbox": [ + 90.36066799296572, + 23.716597438121028, + 90.4097904083321, + 23.761563518416963 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0119_label_positive_jitter_packet.png", + "sha256": "3dd7b723133c7195c6251a10a7d798e367012be75b7bc38ead6d9fb3db71e032", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0119_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0119_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0119_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0119_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0119_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0119_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0119_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 50.0622, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 253746, + "min": 57.6945, + "max": 1105.088, + "mean": 319.7122, + "median": 275.5833, + "p90": 558.949 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 486, + "major_roads": 2452, + "schools_waterpoints": 517, + "urban_landuse": 55035, + "water_surface": 83, + "waterways": 927 + }, + "label_counts": { + "vector_label": 12, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0121_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0121_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..d9e0d5f0c8ff88cef0235075014819544e153bf2 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0121_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0121_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.37871767776053, + "lat": 23.700799345753712 + }, + "bbox": [ + 90.35416367937273, + 23.678316305605744, + 90.40327167614834, + 23.72328238590168 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0121_label_positive_jitter_packet.png", + "sha256": "6336b323c2b0cc0a00f81909218b28739d75e242b74d3c1784d3ac368ff2e50f", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0121_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0121_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0121_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0121_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0121_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0121_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0121_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 54.6752, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 236296, + "min": 0.0142, + "max": 961.8489, + "mean": 123.0717, + "median": 71.4407, + "p90": 390.4122 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 47, + "major_roads": 1292, + "schools_waterpoints": 151, + "urban_landuse": 62300, + "water_surface": 126, + "waterways": 788 + }, + "label_counts": { + "vector_label": 7, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0122_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0122_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..74d9a5976814d347c133ab0a977e049d17f3744e --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0122_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0122_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.42132513942717, + "lat": 23.703746431440766 + }, + "bbox": [ + 90.39677058656915, + 23.6812633912928, + 90.44587969228519, + 23.726229471588734 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0122_label_positive_jitter_packet.png", + "sha256": "f6d3c315313f1d3e83a6a39b9c278d4b7eb48404701a5e000aef9ca18369319b", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0122_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0122_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0122_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0122_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0122_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0122_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0122_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 48.7975, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 257858, + "min": 0.0, + "max": 1102.7343, + "mean": 227.1375, + "median": 176.698, + "p90": 409.5763 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 303, + "major_roads": 2236, + "schools_waterpoints": 248, + "urban_landuse": 72869, + "water_surface": 54, + "waterways": 1444 + }, + "label_counts": { + "vector_label": 10, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0123_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0123_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..1795fb672dd0a95fb0175e7478fa237a844e2a31 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0123_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0123_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.42073778118302, + "lat": 23.710261150568073 + }, + "bbox": [ + 90.39618200231413, + 23.687778110420105, + 90.44529356005191, + 23.73274419071604 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0123_label_positive_jitter_packet.png", + "sha256": "8848b458604efab645677a9ae9e7c0ea4ec6fadc601a09b90e798c9d95187cde", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0123_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0123_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0123_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0123_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0123_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0123_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0123_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 48.0506, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 257480, + "min": 0.0, + "max": 1104.0121, + "mean": 248.1339, + "median": 197.2869, + "p90": 446.6647 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 320, + "major_roads": 2445, + "schools_waterpoints": 262, + "urban_landuse": 73261, + "water_surface": 54, + "waterways": 1453 + }, + "label_counts": { + "vector_label": 14, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0124_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0124_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..c19ac68e00ec5002b7ea67a641d20b9fc4bad762 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0124_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0124_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.38013174406272, + "lat": 23.741871953140272 + }, + "bbox": [ + 90.35557001008037, + 23.719388912992304, + 90.40469347804508, + 23.76435499328824 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0124_label_positive_jitter_packet.png", + "sha256": "1acc7341dac558b3367f1503260e075bad2116e411a4d8a7cb7eecc69d0c4941", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0124_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0124_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0124_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0124_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0124_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0124_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0124_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 50.9547, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 241903, + "min": 57.6506, + "max": 965.8677, + "mean": 311.37, + "median": 278.5105, + "p90": 505.8394 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 497, + "major_roads": 2280, + "schools_waterpoints": 397, + "urban_landuse": 49821, + "water_surface": 89, + "waterways": 505 + }, + "label_counts": { + "vector_label": 11, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0126_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0126_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..cfa37386e5278d63d7d817e3891adc6098f78e24 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0126_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0126_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.40632632506166, + "lat": 23.69464618414213 + }, + "bbox": [ + 90.38177348405108, + 23.67216314399416, + 90.43087916607223, + 23.717129224290098 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0126_label_positive_jitter_packet.png", + "sha256": "2f98dabc8b4e635d58b48d8489ebae1f10b853cdd9b4f76025fca253969a73dc", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0126_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0126_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0126_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0126_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0126_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0126_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0126_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 52.8269, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 252681, + "min": 0.0, + "max": 1055.946, + "mean": 143.6161, + "median": 113.2012, + "p90": 348.4599 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 222, + "major_roads": 1729, + "schools_waterpoints": 179, + "urban_landuse": 61370, + "water_surface": 88, + "waterways": 644 + }, + "label_counts": { + "vector_label": 6, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0127_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0127_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..607ee00f4d33e7c897478a3fa7363c76b15bf6a7 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0127_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0127_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.39695547769352, + "lat": 23.715370401862735 + }, + "bbox": [ + 90.37239873700223, + 23.692887361714767, + 90.42151221838482, + 23.737853442010703 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0127_label_positive_jitter_packet.png", + "sha256": "26b650b46db04df484caf5ef242e52c48fa90165f1e639a511a28c6c4019f8a4", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0127_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0127_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0127_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0127_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0127_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0127_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0127_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 49.1269, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 248389, + "min": 0.0, + "max": 1104.943, + "mean": 270.7032, + "median": 166.5022, + "p90": 595.5157 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 210, + "major_roads": 2581, + "schools_waterpoints": 267, + "urban_landuse": 72043, + "water_surface": 94, + "waterways": 1486 + }, + "label_counts": { + "vector_label": 17, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0128_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0128_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..46ac93e57e3f346b2d7d318e46850f10360613c8 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0128_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0128_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.41860711623339, + "lat": 23.799957052024496 + }, + "bbox": [ + 90.39403441264331, + 23.777474011876528, + 90.44317981982347, + 23.822440092172464 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0128_label_positive_jitter_packet.png", + "sha256": "d16b439928e1b5ea27e8b6012be896fd6da9dbe2163f1e23239f084a7905a6fd", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0128_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0128_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0128_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0128_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0128_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0128_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0128_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 50.6687, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 216133, + "min": 3.7106, + "max": 600.0649, + "mean": 178.3146, + "median": 153.8891, + "p90": 365.6912 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 244, + "major_roads": 1877, + "schools_waterpoints": 331, + "urban_landuse": 46024, + "water_surface": 144, + "waterways": 15 + }, + "label_counts": { + "vector_label": 7, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0129_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0129_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..18d64e287cde70f67923c68c9562570d5a9db3ea --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0129_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0129_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.39951952405265, + "lat": 23.726237487492973 + }, + "bbox": [ + 90.37496073671998, + 23.703754447345005, + 90.42407831138532, + 23.74872052764094 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0129_label_positive_jitter_packet.png", + "sha256": "92c90afbded9338f191227411c7fd330aac3d7ab057d2733d36073251ba4d5a0", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0129_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0129_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0129_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0129_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0129_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0129_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0129_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 47.1378, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 249375, + "min": 0.0, + "max": 1103.4629, + "mean": 319.63, + "median": 280.3331, + "p90": 595.3071 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 339, + "major_roads": 2773, + "schools_waterpoints": 348, + "urban_landuse": 59331, + "water_surface": 85, + "waterways": 1481 + }, + "label_counts": { + "vector_label": 16, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0130_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0130_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..5117f4c5076a14168c408c8afa61cea73127dcc6 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0130_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0130_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.42570389780963, + "lat": 23.706820035806253 + }, + "bbox": [ + 90.40114876658204, + 23.684336995658285, + 90.45025902903721, + 23.72930307595422 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0130_label_positive_jitter_packet.png", + "sha256": "63182af3c1f8bb8b50146a4fe67259f0fab229fb3ec0914f13c011518e7f813b", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0130_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0130_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0130_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0130_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0130_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0130_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0130_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 48.9028, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 254249, + "min": 0.0, + "max": 1102.8171, + "mean": 237.3304, + "median": 193.3055, + "p90": 394.5688 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 270, + "major_roads": 2244, + "schools_waterpoints": 218, + "urban_landuse": 70042, + "water_surface": 71, + "waterways": 987 + }, + "label_counts": { + "vector_label": 9, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0131_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0131_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..aa18da093789b0de61fd10d51b543135696830a9 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0131_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0131_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.40999598733669, + "lat": 23.721579076317393 + }, + "bbox": [ + 90.38543807749105, + 23.699096036169426, + 90.43455389718233, + 23.74406211646536 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0131_label_positive_jitter_packet.png", + "sha256": "fe8aa6ae681761788c7e878d391ec07dfe57d04b7c3a59ff879840e71c0ddb9e", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0131_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0131_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0131_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0131_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0131_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0131_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0131_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 46.9859, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 256463, + "min": 0.0, + "max": 1103.0955, + "mean": 296.4543, + "median": 257.5282, + "p90": 588.97 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 399, + "major_roads": 2777, + "schools_waterpoints": 320, + "urban_landuse": 61375, + "water_surface": 88, + "waterways": 1491 + }, + "label_counts": { + "vector_label": 16, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0133_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0133_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..8c9867254014f78dca3355ba81482de84bbe4ab9 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0133_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0133_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.36291783011538, + "lat": 23.792552482727384 + }, + "bbox": [ + 90.33834652685785, + 23.770069442579416, + 90.38748913337291, + 23.815035522875352 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0133_label_positive_jitter_packet.png", + "sha256": "6f24618de29c1c1a00b4622f05ada03961c74ffcf40d26658ddb8029e31683e3", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0133_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0133_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0133_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0133_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0133_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0133_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0133_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 51.7187, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 230708, + "min": 47.9763, + "max": 1148.7042, + "mean": 335.7117, + "median": 301.3435, + "p90": 554.5255 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 723, + "major_roads": 3233, + "schools_waterpoints": 254, + "urban_landuse": 63159, + "water_surface": 67, + "waterways": 31 + }, + "label_counts": { + "vector_label": 2, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0134_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0134_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..9ec37f6d33ad1f64f7f8949f5112c8a24315c752 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0134_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0134_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.39491980854947, + "lat": 23.72364855880073 + }, + "bbox": [ + 90.37036150891115, + 23.70116551865276, + 90.4194781081878, + 23.746131598948697 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0134_label_positive_jitter_packet.png", + "sha256": "773542b8623345bf10e0309554e78ccee22601c4cc7043c0adc0dfa7f36e1717", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0134_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0134_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0134_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0134_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0134_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0134_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0134_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 48.2968, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 247535, + "min": 0.0, + "max": 1100.9072, + "mean": 301.1337, + "median": 242.6566, + "p90": 596.1218 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 286, + "major_roads": 2583, + "schools_waterpoints": 342, + "urban_landuse": 65629, + "water_surface": 79, + "waterways": 1482 + }, + "label_counts": { + "vector_label": 17, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0135_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0135_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..14b2e4f08aafecca27fc65fe728a0499ed085f75 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0135_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0135_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.39737632944075, + "lat": 23.725630150073357 + }, + "bbox": [ + 90.37281765652266, + 23.70314710992539, + 90.42193500235884, + 23.748113190221325 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0135_label_positive_jitter_packet.png", + "sha256": "d8b933ecdc79358a3c3aee7c7d648bbcf3ba72f548c0d817d0956f80d93911b0", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0135_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0135_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0135_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0135_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0135_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0135_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0135_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 47.307, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 248297, + "min": 0.0, + "max": 1103.7742, + "mean": 314.0915, + "median": 269.3372, + "p90": 595.7144 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 308, + "major_roads": 2721, + "schools_waterpoints": 342, + "urban_landuse": 62200, + "water_surface": 85, + "waterways": 1481 + }, + "label_counts": { + "vector_label": 17, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0136_label_positive_jitter_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0136_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..564fbd4b03ed5efff5218563e2db9037be3cc199 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0136_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0136_label_positive_jitter", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.39900891656826, + "lat": 23.80861970586891 + }, + "bbox": [ + 90.37443457399641, + 23.786136665720942, + 90.42358325914012, + 23.831102746016878 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0136_label_positive_jitter_packet.png", + "sha256": "e4c53da13b548e8da71569a71a6d20d593f00e7881340ce1a3db7f04a622f049", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0136_label_positive_jitter", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0136_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0136_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0136_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0136_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0136_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0136_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 50.3731, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 227857, + "min": 1.5549, + "max": 536.7397, + "mean": 151.1013, + "median": 144.8653, + "p90": 301.765 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 357, + "major_roads": 2053, + "schools_waterpoints": 220, + "urban_landuse": 44174, + "water_surface": 207, + "waterways": 16 + }, + "label_counts": { + "vector_label": 3, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0137_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0137_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..60d0af5daa25b64ad95be4c7d0449727141748f9 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0137_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0137_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.4195639596865, + "lat": 23.889913320791077 + }, + "bbox": [ + 90.39497419823041, + 23.86743028064311, + 90.44415372114258, + 23.912396360939045 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0137_hard_negative_water_urban_packet.png", + "sha256": "292a8f38318a9504ec24deca0a0d48f1255599b7c9ad69c5eaf5d8b0f1c71799", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0137_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0137_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0137_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0137_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0137_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0137_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0137_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 52.709, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 225985, + "min": 17.5791, + "max": 313.8906, + "mean": 103.1718, + "median": 102.5731, + "p90": 180.3732 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 40, + "major_roads": 838, + "schools_waterpoints": 34, + "urban_landuse": 45039, + "water_surface": 118, + "waterways": 4 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0138_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0138_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..f6bb7f8681a2bcf5b44934ef945979edea08a41c --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0138_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0138_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.34461457416812, + "lat": 23.925997180594493 + }, + "bbox": [ + 90.3200179466446, + 23.903514140446525, + 90.36921120169164, + 23.94848022074246 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0138_hard_negative_water_urban_packet.png", + "sha256": "4e613d21e25de4e1eb07214cef0b12a83e1d70b2d138e50e0bcc0cb1851d47ff", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0138_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0138_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0138_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0138_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0138_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0138_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0138_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 46.9862, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 146763, + "min": 4.9863, + "max": 48.0771, + "mean": 21.0802, + "median": 18.7201, + "p90": 33.7681 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 170, + "schools_waterpoints": 3, + "urban_landuse": 8784, + "water_surface": 75, + "waterways": 9 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0139_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0139_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..1ae0d3c9e3e8a1050dd398b53719dd0fceceabe4 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0139_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0139_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.32713993326092, + "lat": 23.682251800734548 + }, + "bbox": [ + 90.30258942237774, + 23.65976876058658, + 90.35169044414411, + 23.704734840882516 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0139_hard_negative_water_urban_packet.png", + "sha256": "f5a8f79f7d5ffa3b1eaf59bfaacb9283aa54a44597583e312ec38ddd0e3480c4", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0139_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0139_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0139_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0139_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0139_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0139_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0139_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 57.2352, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 255043, + "min": 6.7374, + "max": 22.3503, + "mean": 11.5933, + "median": 10.7077, + "p90": 16.5067 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 187, + "schools_waterpoints": 1, + "urban_landuse": 14355, + "water_surface": 278, + "waterways": 29 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0140_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0140_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..1686967b5488d42bb4585aa0ffcdbb6c6f3faf7d --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0140_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0140_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.26164974442814, + "lat": 23.78710506682846 + }, + "bbox": [ + 90.23707947100762, + 23.76462202668049, + 90.28622001784866, + 23.809588106976427 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0140_hard_negative_water_urban_packet.png", + "sha256": "c78db21f8f002fcbd8f7fdb715561c72bb156bd733b18b2464f38956abf30852", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0140_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0140_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0140_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0140_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0140_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0140_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0140_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 56.1487, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 222338, + "min": 6.5967, + "max": 33.1891, + "mean": 19.7677, + "median": 19.5673, + "p90": 27.1466 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 8, + "major_roads": 282, + "schools_waterpoints": 7, + "urban_landuse": 19737, + "water_surface": 164, + "waterways": 4 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0141_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0141_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..374588bf772300c645e3fef074d9fa3bdaa5e71f --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0141_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0141_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.3820990303464, + "lat": 23.80626881717989 + }, + "bbox": [ + 90.35752513264191, + 23.783785777031923, + 90.40667292805088, + 23.82875185732786 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0141_hard_negative_water_urban_packet.png", + "sha256": "1f9e11399315009ba30ed2c4bac825175106b8f5fc2d73938627ad81c56fa77b", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0141_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0141_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0141_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0141_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0141_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0141_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0141_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 51.2076, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 235131, + "min": 1.7592, + "max": 1148.0238, + "mean": 243.397, + "median": 219.8537, + "p90": 509.8734 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 817, + "major_roads": 3077, + "schools_waterpoints": 412, + "urban_landuse": 67285, + "water_surface": 184, + "waterways": 22 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0142_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0142_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..cd7395f55a5828d4d3e6b7e1d64c58ae0701e477 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0142_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0142_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.35807053895734, + "lat": 23.955341665018377 + }, + "bbox": [ + 90.33346831771668, + 23.93285862487041, + 90.38267276019799, + 23.977824705166345 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0142_hard_negative_water_urban_packet.png", + "sha256": "1ef93c084b2732f9de99d2cb18d91193f709c89a949be56412ffe5a1357db9ed", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0142_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0142_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0142_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0142_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0142_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0142_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0142_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 52.0952, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 200115, + "min": 5.0189, + "max": 95.5832, + "mean": 32.3625, + "median": 30.682, + "p90": 51.3543 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 21, + "major_roads": 246, + "schools_waterpoints": 21, + "urban_landuse": 27023, + "water_surface": 246, + "waterways": 10 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0143_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0143_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..5c175d800a6ca548f4919d10b14588e377dc61a4 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0143_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0143_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.42340229398832, + "lat": 23.729701046568028 + }, + "bbox": [ + 90.39884285409246, + 23.70721800642006, + 90.44796173388417, + 23.752184086715996 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0143_hard_negative_water_urban_packet.png", + "sha256": "4ca667138a994f7fe41e4a1662513776e1c7a6eaf0b40cd567bc1cf1f8557939", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0143_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0143_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0143_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0143_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0143_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0143_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0143_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 48.5561, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 251356, + "min": 0.0, + "max": 1102.3209, + "mean": 317.9487, + "median": 297.5025, + "p90": 517.9717 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 402, + "major_roads": 2670, + "schools_waterpoints": 320, + "urban_landuse": 60046, + "water_surface": 72, + "waterways": 1364 + }, + "label_counts": { + "vector_label": 13, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0144_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0144_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..143172dafd41df9984ef53165c3843580ff6bd2e --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0144_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0144_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.42422509134398, + "lat": 23.809249021605073 + }, + "bbox": [ + 90.39965062967462, + 23.786765981457105, + 90.44879955301334, + 23.83173206175304 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0144_hard_negative_water_urban_packet.png", + "sha256": "b1727aa5bb265083f33ebcf817e8293f030a90e461ce9b94e31a835bab67cf16", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0144_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0144_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0144_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0144_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0144_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0144_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0144_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 52.6913, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 193925, + "min": 1.5541, + "max": 570.0641, + "mean": 147.9928, + "median": 139.1369, + "p90": 343.9506 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 77, + "major_roads": 1839, + "schools_waterpoints": 45, + "urban_landuse": 33402, + "water_surface": 92, + "waterways": 19 + }, + "label_counts": { + "vector_label": 3, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0145_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0145_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..fc0d3dddc4059ec56b25cfa175bc6fa89eed0d7b --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0145_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0145_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.29175377840637, + "lat": 23.871881567632045 + }, + "bbox": [ + 90.26716744295797, + 23.849398527484077, + 90.31634011385478, + 23.894364607780012 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0145_hard_negative_water_urban_packet.png", + "sha256": "393b4c125f54a093d63d724031bf6a31d2b1fae689ce3426c236e53dd01a6122", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0145_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0145_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0145_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0145_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0145_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0145_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0145_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 55.3389, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 257161, + "min": 9.5619, + "max": 26.3698, + "mean": 17.466, + "median": 16.9049, + "p90": 22.6208 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 2, + "major_roads": 829, + "schools_waterpoints": 16, + "urban_landuse": 19706, + "water_surface": 122, + "waterways": 11 + }, + "label_counts": { + "vector_label": 2, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0146_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0146_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..15721c483d8fd4e540e08722bff1a85d57717e85 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0146_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0146_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.37745665632568, + "lat": 24.00725907971815 + }, + "bbox": [ + 90.35284451640511, + 23.984776039570182, + 90.40206879624624, + 24.029742119866118 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0146_hard_negative_water_urban_packet.png", + "sha256": "ff223e43c01b1c55ffcb20c3ab86a2f6e9e757bab40085a5006143bf1d6dbbfd", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0146_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0146_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0146_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0146_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0146_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0146_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0146_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 54.4684, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 237380, + "min": 7.4015, + "max": 92.7144, + "mean": 32.7311, + "median": 30.0271, + "p90": 48.2332 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 23, + "major_roads": 229, + "schools_waterpoints": 25, + "urban_landuse": 29988, + "water_surface": 16, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0147_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0147_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..74a649d88664efcba1da50323859d910f95823f1 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0147_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0147_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.11247669390511, + "lat": 23.618851419563626 + }, + "bbox": [ + 90.08793807734057, + 23.596368379415658, + 90.13701531046965, + 23.641334459711594 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0147_hard_negative_water_urban_packet.png", + "sha256": "e5f27d0295778290a5b891614e27d72cc64ff118a9ea1818f7f0ed20df33fa0e", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0147_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0147_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0147_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0147_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0147_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0147_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0147_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 57.3638, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 257869, + "min": 0.0, + "max": 42.8261, + "mean": 19.7947, + "median": 20.8966, + "p90": 28.8862 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 186, + "schools_waterpoints": 16, + "urban_landuse": 11578, + "water_surface": 41, + "waterways": 4 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0150_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0150_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..96def3960a74f797b03f42a02f914b6819bc6e69 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0150_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0150_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.45314633507965, + "lat": 24.003430975046424 + }, + "bbox": [ + 90.42853492747125, + 23.980947934898456, + 90.47775774268806, + 24.02591401519439 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0150_hard_negative_water_urban_packet.png", + "sha256": "ead5b6c8146f8efe41b2f578444f2d20238288fc97a0ce9fa505c06c9a3c3de1", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0150_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0150_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0150_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0150_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0150_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0150_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0150_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 51.3447, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 227351, + "min": 3.7832, + "max": 61.8827, + "mean": 15.522, + "median": 9.0884, + "p90": 33.1654 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 97, + "schools_waterpoints": 1, + "urban_landuse": 6602, + "water_surface": 3, + "waterways": 2 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0151_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0151_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..e3ecda0d61c83b17a7f10e64ae9f281eaa07b6b1 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0151_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0151_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.43815559243617, + "lat": 23.678116198226153 + }, + "bbox": [ + 90.41360585868668, + 23.655633158078185, + 90.46270532618567, + 23.70059923837412 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0151_hard_negative_water_urban_packet.png", + "sha256": "a71bd934aab19b73610e09b57d9c417bce2376b6cc90198ac08926d6874c8cc2", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0151_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0151_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0151_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0151_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0151_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0151_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0151_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 53.6024, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 229985, + "min": 0.0, + "max": 443.5074, + "mean": 133.6172, + "median": 117.3808, + "p90": 298.6145 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 45, + "major_roads": 1105, + "schools_waterpoints": 51, + "urban_landuse": 44114, + "water_surface": 164, + "waterways": 32 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0152_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0152_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..57bd6f77c401cc641ae6645846f3c064286de4f9 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0152_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0152_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.23907712823828, + "lat": 24.01339681464573 + }, + "bbox": [ + 90.21446381385557, + 23.990913774497763, + 90.26369044262098, + 24.0358798547937 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0152_hard_negative_water_urban_packet.png", + "sha256": "7bb8aa3652635f46abfaf96947fa0e03c9fe108882596f9788d055594c1e247e", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0152_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0152_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0152_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0152_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0152_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0152_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0152_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 52.8742, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 230797, + "min": 3.5333, + "max": 24.2016, + "mean": 12.6439, + "median": 11.9446, + "p90": 18.2627 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 10, + "major_roads": 226, + "schools_waterpoints": 13, + "urban_landuse": 18001, + "water_surface": 152, + "waterways": 4 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0153_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0153_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..c5e061fed2ae78c332fbde116a804102bfbc961d --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0153_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0153_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.49629503442598, + "lat": 23.630852312792385 + }, + "bbox": [ + 90.47175416960658, + 23.608369272644417, + 90.52083589924538, + 23.653335352940353 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0153_hard_negative_water_urban_packet.png", + "sha256": "8fa7787d9064d6e24dfafb20197f6398fd4d6bdf3877a5ad4136ac2388473027", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0153_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0153_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0153_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0153_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0153_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0153_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0153_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 51.3001, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 207429, + "min": 0.0, + "max": 203.982, + "mean": 121.4815, + "median": 122.75, + "p90": 161.0185 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 7, + "major_roads": 630, + "schools_waterpoints": 7, + "urban_landuse": 69601, + "water_surface": 201, + "waterways": 38 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0154_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0154_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..b160f3f7013ed259bfe3eef453f8ebc410ce9d8c --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0154_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0154_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.4634498867221, + "lat": 23.66096309816 + }, + "bbox": [ + 90.43890337437377, + 23.638480058012032, + 90.48799639907044, + 23.683446138307968 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0154_hard_negative_water_urban_packet.png", + "sha256": "83ed7135d928346bb30ce3e1f82652872adeb6c0b4bbd929060b722ba5f79834", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0154_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0154_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0154_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0154_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0154_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0154_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0154_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 54.6038, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 205372, + "min": 0.0, + "max": 443.8026, + "mean": 102.856, + "median": 80.458, + "p90": 153.8508 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 505, + "schools_waterpoints": 6, + "urban_landuse": 43782, + "water_surface": 504, + "waterways": 17 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0155_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0155_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..1cdefe7e8b1aa496ef34af09693d1c8d5176e7af --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0155_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0155_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.45901973777156, + "lat": 23.70324972653983 + }, + "bbox": [ + 90.43446527837084, + 23.680766686391863, + 90.48357419717227, + 23.7257327666878 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0155_hard_negative_water_urban_packet.png", + "sha256": "bbe952cea2c0243d69bf579ecf0e271252c37f34d8e9de2923e9682d9a4b8642", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0155_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0155_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0155_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0155_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0155_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0155_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0155_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 50.0479, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 247463, + "min": 0.0, + "max": 611.8537, + "mean": 212.189, + "median": 183.7887, + "p90": 406.3022 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 13, + "major_roads": 1287, + "schools_waterpoints": 32, + "urban_landuse": 54082, + "water_surface": 215, + "waterways": 57 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0156_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0156_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..fca35effefe55d0a4ff7a40b6f1079dcb97d1c5f --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0156_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0156_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.42679934463719, + "lat": 23.991216107123567 + }, + "bbox": [ + 90.40219027269364, + 23.9687330669756, + 90.45140841658073, + 24.013699147271534 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0156_hard_negative_water_urban_packet.png", + "sha256": "1abdf310693e03b88920b187fe7546da91ad5677e8400e9fbaf9fed4ea6c72ae", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0156_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0156_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0156_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0156_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0156_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0156_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0156_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 53.6351, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 248485, + "min": 10.0634, + "max": 111.6482, + "mean": 33.2935, + "median": 29.4116, + "p90": 54.0755 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 2, + "major_roads": 287, + "schools_waterpoints": 5, + "urban_landuse": 23627, + "water_surface": 24, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0157_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0157_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..ad73d21e7df4e60d4af88731d7aa227114de9651 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0157_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0157_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.36214281994658, + "lat": 23.78714230943835 + }, + "bbox": [ + 90.33757253948637, + 23.764659269290384, + 90.3867131004068, + 23.80962534958632 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0157_hard_negative_water_urban_packet.png", + "sha256": "ef316cc5de3f1e08880ea9063089cd2989ad479758c9cfe33d7dd5c485d7d6a4", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0157_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0157_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0157_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0157_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0157_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0157_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0157_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 51.6973, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 230400, + "min": 86.5601, + "max": 1155.5151, + "mean": 336.5447, + "median": 311.5857, + "p90": 527.0869 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 795, + "major_roads": 3141, + "schools_waterpoints": 224, + "urban_landuse": 59833, + "water_surface": 65, + "waterways": 24 + }, + "label_counts": { + "vector_label": 2, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0160_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0160_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..c8d84a03236d9d9a1ac3b45708237654bda65ed1 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0160_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0160_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.38431125829548, + "lat": 23.81866895628 + }, + "bbox": [ + 90.35973501341869, + 23.796185916132032, + 90.40888750317228, + 23.841151996427968 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0160_hard_negative_water_urban_packet.png", + "sha256": "5d22c2a03b6ea58a146e4fe390a0a81798e342fb3c196b6f0345c76f44d8e5f8", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0160_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0160_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0160_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0160_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0160_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0160_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0160_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 53.5432, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 214818, + "min": 1.0335, + "max": 1085.2079, + "mean": 144.5085, + "median": 88.9695, + "p90": 375.9927 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 639, + "major_roads": 2485, + "schools_waterpoints": 361, + "urban_landuse": 54883, + "water_surface": 216, + "waterways": 20 + }, + "label_counts": { + "vector_label": 2, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0161_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0161_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..0c041c0f691cd6455e13fba4ec340bd8dfee8a41 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0161_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0161_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.43793120535982, + "lat": 23.99735985487227 + }, + "bbox": [ + 90.41332095883534, + 23.9748768147243, + 90.46254145188429, + 24.019842895020236 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0161_hard_negative_water_urban_packet.png", + "sha256": "5befa67f7886256843cc2db2963bf030793d211b8925f07f80438d6e57c28866", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0161_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0161_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0161_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0161_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0161_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0161_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0161_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 52.9843, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 241904, + "min": 5.8753, + "max": 111.8112, + "mean": 28.9525, + "median": 24.8116, + "p90": 55.319 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 2, + "major_roads": 207, + "schools_waterpoints": 8, + "urban_landuse": 16904, + "water_surface": 8, + "waterways": 3 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0162_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0162_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..2bc312b6fa7a043b27d103a9e91c62cfe60327fa --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0162_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0162_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.43979273091483, + "lat": 23.770992367597817 + }, + "bbox": [ + 90.41522550180407, + 23.74850932744985, + 90.46435996002559, + 23.793475407745785 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0162_hard_negative_water_urban_packet.png", + "sha256": "ae11fdbcbda1c064b75bc0cb09ba852e7b077a04054a03dbdd7256c3538ebc47", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0162_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0162_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0162_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0162_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0162_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0162_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0162_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 50.1683, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 163327, + "min": 27.4873, + "max": 637.5536, + "mean": 309.0929, + "median": 320.8512, + "p90": 516.9781 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 143, + "major_roads": 1651, + "schools_waterpoints": 68, + "urban_landuse": 41921, + "water_surface": 99, + "waterways": 11 + }, + "label_counts": { + "vector_label": 2, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0163_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0163_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..a25040a31e8f02b05e4cbc1cb72e4bd42e5f7a85 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0163_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0163_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.39513506425874, + "lat": 24.024776840104835 + }, + "bbox": [ + 90.37051957125193, + 24.002293799956867, + 90.41975055726554, + 24.047259880252803 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0163_hard_negative_water_urban_packet.png", + "sha256": "23be7e41928571b1d3c1f8fd74c466a4baf8bd874a504676d5db6403ece0433d", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0163_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0163_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0163_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0163_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0163_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0163_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0163_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 55.6182, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 240249, + "min": 15.043, + "max": 110.0333, + "mean": 27.3856, + "median": 24.2223, + "p90": 40.523 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 12, + "major_roads": 313, + "schools_waterpoints": 18, + "urban_landuse": 23297, + "water_surface": 6, + "waterways": 1 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0164_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0164_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..aec851abab923becb631a7b69891cc9a2d8fbf89 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0164_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0164_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.39802998433449, + "lat": 23.876199558175056 + }, + "bbox": [ + 90.37344282878264, + 23.85371651802709, + 90.42261713988633, + 23.898682598323024 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0164_hard_negative_water_urban_packet.png", + "sha256": "b1d961db62c4987331ac4eee714197ccc6e3a97ac1c464f44129ff256da110bb", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0164_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0164_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0164_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0164_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0164_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0164_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0164_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 50.8762, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 231994, + "min": 1.0071, + "max": 314.6429, + "mean": 119.6611, + "median": 117.063, + "p90": 200.4182 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 72, + "major_roads": 1528, + "schools_waterpoints": 55, + "urban_landuse": 53387, + "water_surface": 111, + "waterways": 14 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0165_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0165_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..e0cb166e928896f7190d8b716a0ec639952fb404 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0165_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0165_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.28768154032781, + "lat": 23.68665100368331 + }, + "bbox": [ + 90.26313020258254, + 23.66416796353534, + 90.31223287807308, + 23.709134043831277 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0165_hard_negative_water_urban_packet.png", + "sha256": "9515145ebd1aca9558a72bad84eb2ea6128330230e16db23ee4e4200b232bddf", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0165_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0165_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0165_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0165_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0165_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0165_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0165_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 56.5003, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 241448, + "min": 5.0651, + "max": 15.377, + "mean": 7.9874, + "median": 7.7877, + "p90": 10.5394 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 114, + "schools_waterpoints": 0, + "urban_landuse": 10899, + "water_surface": 81, + "waterways": 6 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0166_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0166_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..fcdec8c47424e75d5550e3f178a61ab589d31e5b --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0166_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0166_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.3597109898997, + "lat": 23.7974857329645 + }, + "bbox": [ + 90.33513875374231, + 23.775002692816532, + 90.38428322605708, + 23.819968773112468 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0166_hard_negative_water_urban_packet.png", + "sha256": "7e875bb3307f7aec70880c904c77e6dba783eeb1ca8b81a69ec187930aef5060", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0166_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0166_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0166_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0166_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0166_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0166_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0166_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 51.3867, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 223532, + "min": 45.9676, + "max": 1144.0442, + "mean": 331.3973, + "median": 291.7467, + "p90": 589.3992 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 662, + "major_roads": 3289, + "schools_waterpoints": 297, + "urban_landuse": 67884, + "water_surface": 63, + "waterways": 33 + }, + "label_counts": { + "vector_label": 2, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0167_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0167_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..2fc9a5c8145db4c8eec2d877f1515941556d508b --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0167_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0167_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.27035936570697, + "lat": 23.917686494829017 + }, + "bbox": [ + 90.2457643207523, + 23.89520345468105, + 90.29495441066163, + 23.940169534976985 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0167_hard_negative_water_urban_packet.png", + "sha256": "19fa4af1eca385f88ee18e77e867ec410e1787a1e36262ff14e5074abb21b119", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0167_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0167_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0167_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0167_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0167_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0167_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0167_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 52.9763, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 252273, + "min": 13.8927, + "max": 51.1959, + "mean": 25.861, + "median": 23.9091, + "p90": 36.3916 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 18, + "major_roads": 999, + "schools_waterpoints": 26, + "urban_landuse": 38150, + "water_surface": 254, + "waterways": 9 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0168_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0168_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..4e8fb979ebfc8531487f93d352b0639764458a5b --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0168_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0168_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.22947782549411, + "lat": 23.995528906925585 + }, + "bbox": [ + 90.20486792905733, + 23.973045866777618, + 90.2540877219309, + 24.018011947073553 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0168_hard_negative_water_urban_packet.png", + "sha256": "2f7e86f16e028e18e186b1a5f4d95b1e9c6314ca7b237cd04b342f1466f63796", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0168_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0168_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0168_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0168_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0168_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0168_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0168_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 51.2657, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 230244, + "min": 3.5521, + "max": 28.1127, + "mean": 13.1547, + "median": 13.0548, + "p90": 18.9006 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 266, + "schools_waterpoints": 9, + "urban_landuse": 16536, + "water_surface": 223, + "waterways": 6 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0170_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0170_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..807b1fbc69237d80a17831a908a617e0f6423f22 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0170_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0170_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.37879846483929, + "lat": 23.71856954287457 + }, + "bbox": [ + 90.35424112176825, + 23.6960865027266, + 90.40335580791033, + 23.741052583022537 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0170_hard_negative_water_urban_packet.png", + "sha256": "5b244bf05f120bf3a1ee34696b17ba50d72c7008dc5a4a2d390baccfdda75509", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0170_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0170_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0170_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0170_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0170_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0170_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0170_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 52.5557, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 226247, + "min": 0.0, + "max": 965.3553, + "mean": 223.7449, + "median": 143.039, + "p90": 535.0105 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 146, + "major_roads": 1754, + "schools_waterpoints": 300, + "urban_landuse": 67507, + "water_surface": 102, + "waterways": 815 + }, + "label_counts": { + "vector_label": 13, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0171_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0171_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..0e965132a0dad08243d21beba167458297fa9edc --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0171_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0171_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.44848019749429, + "lat": 23.70169991106005 + }, + "bbox": [ + 90.423926029682, + 23.679216870912082, + 90.47303436530659, + 23.724182951208018 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0171_hard_negative_water_urban_packet.png", + "sha256": "db43a590fb67f1dc40a815ed16b7783da3fe7540a485a7233d8c022a19fbe470", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0171_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0171_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0171_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0171_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0171_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0171_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0171_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 49.4382, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 248617, + "min": 0.0, + "max": 613.5994, + "mean": 229.2977, + "median": 201.2509, + "p90": 406.4815 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 116, + "major_roads": 1526, + "schools_waterpoints": 92, + "urban_landuse": 58613, + "water_surface": 197, + "waterways": 51 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0172_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0172_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..ae6553080d569f189b5a3644a44a6f410ace1cc3 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0172_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0172_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.45356228074908, + "lat": 23.78684904752023 + }, + "bbox": [ + 90.42899205572157, + 23.764366007372264, + 90.4781325057766, + 23.8093320876682 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0172_hard_negative_water_urban_packet.png", + "sha256": "3af79920c1d09869bfb0b0793b31c99c5fdfb335c189f1084c8a258983f343e8", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0172_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0172_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0172_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0172_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0172_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0172_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0172_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 54.6817, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 90734, + "min": 7.0689, + "max": 638.4046, + "mean": 248.0283, + "median": 260.537, + "p90": 473.4463 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 8, + "major_roads": 924, + "schools_waterpoints": 2, + "urban_landuse": 21340, + "water_surface": 129, + "waterways": 29 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0173_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0173_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..aa0673cd6b8452d1209b7c1c6ad12cbf483872e0 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0173_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0173_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.30257841082917, + "lat": 23.917877309726567 + }, + "bbox": [ + 90.27798332954652, + 23.8953942695786, + 90.32717349211183, + 23.940360349874535 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0173_hard_negative_water_urban_packet.png", + "sha256": "d2687c22ae12072a5be0e998fbc54f9e39ba49f8e176815a7cb6c5409b2368b3", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0173_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0173_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0173_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0173_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0173_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0173_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0173_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 54.984, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 254847, + "min": 9.3573, + "max": 44.9326, + "mean": 18.2797, + "median": 18.1038, + "p90": 21.4932 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 22, + "major_roads": 668, + "schools_waterpoints": 19, + "urban_landuse": 42882, + "water_surface": 57, + "waterways": 7 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0174_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0174_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..22a62962bdab5e28d9ac52f12da55bf36e01b7ab --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0174_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0174_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.43235576516982, + "lat": 23.724380813415472 + }, + "bbox": [ + 90.4077973275987, + 23.701897773267504, + 90.45691420274093, + 23.74686385356344 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0174_hard_negative_water_urban_packet.png", + "sha256": "af11a66ea171e3b552d443377728034a81e07ac4afb85848a670b4ec7b051589", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0174_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0174_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0174_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0174_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0174_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0174_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0174_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 50.3131, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 241981, + "min": 0.0, + "max": 1102.3896, + "mean": 286.7856, + "median": 273.111, + "p90": 417.6586 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 296, + "major_roads": 2066, + "schools_waterpoints": 208, + "urban_landuse": 54869, + "water_surface": 83, + "waterways": 27 + }, + "label_counts": { + "vector_label": 6, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0175_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0175_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..823af93ee6914873beccfe6413af625881f1a019 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0175_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0175_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.36383356070239, + "lat": 23.710328652171842 + }, + "bbox": [ + 90.33927776912802, + 23.687845612023875, + 90.38838935227676, + 23.73281169231981 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0175_hard_negative_water_urban_packet.png", + "sha256": "4fb5117006d5724d0337a3442d4cea4e6c311229a71ba71d32bc93e11f34e038", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0175_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0175_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0175_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0175_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0175_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0175_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0175_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 55.4051, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 227834, + "min": 13.6499, + "max": 712.4628, + "mean": 112.2837, + "median": 54.1603, + "p90": 409.7098 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 29, + "major_roads": 864, + "schools_waterpoints": 155, + "urban_landuse": 53706, + "water_surface": 109, + "waterways": 21 + }, + "label_counts": { + "vector_label": 3, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0176_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0176_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..7ca8b7c308ece45cce7916546e1cbf68d8622647 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0176_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0176_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.37269337535582, + "lat": 23.99357013148607 + }, + "bbox": [ + 90.34808385340922, + 23.971087091338102, + 90.39730289730242, + 24.016053171634038 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0176_hard_negative_water_urban_packet.png", + "sha256": "ad11d8bd0f2264f900e75a43ce9794a2af579856270b0298d3612d5276b5c539", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0176_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0176_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0176_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0176_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0176_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0176_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0176_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 54.6354, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 240853, + "min": 17.2428, + "max": 92.7136, + "mean": 36.9561, + "median": 35.7382, + "p90": 52.533 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 26, + "major_roads": 308, + "schools_waterpoints": 30, + "urban_landuse": 37847, + "water_surface": 146, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0177_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0177_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..22993a8544c1b973617af8b4c2ee545748d73e54 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0177_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0177_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.43018290833439, + "lat": 23.923487683726528 + }, + "bbox": [ + 90.40558675875978, + 23.90100464357856, + 90.454779057909, + 23.945970723874495 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0177_hard_negative_water_urban_packet.png", + "sha256": "726ff85b519b5f7f6efc5c4ed9f5f713c02a371038f15861b970dd2d15061688", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0177_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0177_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0177_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0177_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0177_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0177_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0177_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 54.0907, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 220323, + "min": 12.4369, + "max": 154.5822, + "mean": 34.3639, + "median": 24.4933, + "p90": 71.7082 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 241, + "schools_waterpoints": 1, + "urban_landuse": 16824, + "water_surface": 43, + "waterways": 4 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0178_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0178_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..b66fce9225be42da21ccc1080df6f7e57e3170f9 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0178_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0178_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.41958911020969, + "lat": 23.77720519406109 + }, + "bbox": [ + 90.39502070757612, + 23.75472215391312, + 90.44415751284325, + 23.799688234209057 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0178_hard_negative_water_urban_packet.png", + "sha256": "b22a895d35f5b572b692cd2342c36db86e4448844cf40f88d7356f357b3a25fa", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0178_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0178_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0178_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0178_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0178_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0178_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0178_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 48.6495, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 212273, + "min": 80.0274, + "max": 638.0507, + "mean": 277.8052, + "median": 255.318, + "p90": 474.4451 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 350, + "major_roads": 2212, + "schools_waterpoints": 621, + "urban_landuse": 57995, + "water_surface": 100, + "waterways": 16 + }, + "label_counts": { + "vector_label": 4, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0179_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0179_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..eaba7c7373d33850abd17c58a46ee54868e1b9fe --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0179_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0179_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.3160704969544, + "lat": 23.762381909340522 + }, + "bbox": [ + 90.29150489358531, + 23.739898869192555, + 90.34063610032348, + 23.78486494948849 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0179_hard_negative_water_urban_packet.png", + "sha256": "bc238736dc664517475b152a920ff4d58c9e38ee708f1daa700c63efd2f412f7", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0179_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0179_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0179_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0179_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0179_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0179_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0179_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 58.5473, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 177724, + "min": 8.897, + "max": 179.2323, + "mean": 25.9643, + "median": 15.1186, + "p90": 44.884 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 453, + "schools_waterpoints": 3, + "urban_landuse": 15734, + "water_surface": 60, + "waterways": 8 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0180_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0180_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..9d50cf96bd695990bc29e2e540b8401fb5161bae --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0180_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0180_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.24314722529313, + "lat": 23.96955564455951 + }, + "bbox": [ + 90.21854229131368, + 23.94707260441154, + 90.26775215927258, + 23.992038684707477 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0180_hard_negative_water_urban_packet.png", + "sha256": "d5aa4be0a325fa47f52243244af66e1b2364cdfc68a170c1a66172e5199e620e", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0180_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0180_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0180_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0180_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0180_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0180_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0180_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 51.8208, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 206443, + "min": 7.034, + "max": 79.585, + "mean": 23.7317, + "median": 19.557, + "p90": 44.4898 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 454, + "schools_waterpoints": 4, + "urban_landuse": 15542, + "water_surface": 258, + "waterways": 12 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0181_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0181_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..bd7b6ce951e84e306802bcf76badd9b6effdfbf9 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0181_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0181_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.39535768769662, + "lat": 23.913458684883672 + }, + "bbox": [ + 90.37076344754927, + 23.890975644735704, + 90.41995192784397, + 23.93594172503164 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0181_hard_negative_water_urban_packet.png", + "sha256": "5e8d472fae18da9dae8d64130b543d540720cce92449be1deb28c6619ad5af23", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0181_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0181_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0181_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0181_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0181_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0181_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0181_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 52.8623, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 228228, + "min": 25.1576, + "max": 196.2729, + "mean": 85.9744, + "median": 73.5798, + "p90": 146.9364 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 38, + "major_roads": 698, + "schools_waterpoints": 159, + "urban_landuse": 51696, + "water_surface": 181, + "waterways": 8 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0182_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0182_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..7e5d2416565a2514e13b1720f8f2f550fc8efc74 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0182_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0182_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.49391055981604, + "lat": 23.706841247058602 + }, + "bbox": [ + 90.46935542459673, + 23.684358206910634, + 90.51846569503536, + 23.72932428720657 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0182_hard_negative_water_urban_packet.png", + "sha256": "cefa2a459e6ab56a9755ffbcf300fd01e6198cf7648dcb5e31e09690fddfe2af", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0182_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0182_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0182_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0182_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0182_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0182_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0182_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 50.9021, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 208581, + "min": 47.4305, + "max": 554.3598, + "mean": 113.7143, + "median": 102.4483, + "p90": 165.8486 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 734, + "schools_waterpoints": 7, + "urban_landuse": 41579, + "water_surface": 242, + "waterways": 39 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0183_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0183_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..937f39bd5d9dbdaab9acc33bbca580c95ff5b64d --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0183_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0183_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.43108670795765, + "lat": 23.916745276080576 + }, + "bbox": [ + 90.40649184218984, + 23.894262235932608, + 90.45568157372546, + 23.939228316228544 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0183_hard_negative_water_urban_packet.png", + "sha256": "a66ed6bd3a8f531394dad1e2330a99bc878f4a608c4d089cb2c017444562d9ce", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0183_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0183_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0183_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0183_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0183_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0183_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0183_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 53.0719, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 205951, + "min": 14.2096, + "max": 165.4336, + "mean": 41.0829, + "median": 26.394, + "p90": 81.5846 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 4, + "major_roads": 259, + "schools_waterpoints": 0, + "urban_landuse": 19721, + "water_surface": 51, + "waterways": 4 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0184_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0184_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..27c47e3971e4d8927e285ad4677c314182acf872 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0184_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0184_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.3904286993979, + "lat": 24.01161367343 + }, + "bbox": [ + 90.36581572626183, + 23.98913063328203, + 90.41504167253397, + 24.034096713577966 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0184_hard_negative_water_urban_packet.png", + "sha256": "65a27e4d3dd8c5352d2310289537ae0c16165e19e8ad466b9172ccadf682bc4a", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0184_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0184_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0184_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0184_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0184_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0184_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0184_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 55.2632, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 258455, + "min": 15.2924, + "max": 92.7021, + "mean": 32.6115, + "median": 30.7765, + "p90": 45.2645 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 21, + "major_roads": 271, + "schools_waterpoints": 21, + "urban_landuse": 33793, + "water_surface": 5, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0185_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0185_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..59f67f44d64deeb9e08991b4199fe512f4137e91 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0185_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0185_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.42523179896824, + "lat": 23.77241209205044 + }, + "bbox": [ + 90.40066430172519, + 23.749929051902473, + 90.4497992962113, + 23.79489513219841 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0185_hard_negative_water_urban_packet.png", + "sha256": "f19cc6eecace859a1d7392f6f7ebb3af618d70557b1430b8536edfac7963f73f", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0185_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0185_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0185_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0185_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0185_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0185_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0185_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 49.088, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 202464, + "min": 79.885, + "max": 636.6046, + "mean": 297.0342, + "median": 275.5549, + "p90": 498.4464 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 411, + "major_roads": 2201, + "schools_waterpoints": 668, + "urban_landuse": 60449, + "water_surface": 97, + "waterways": 17 + }, + "label_counts": { + "vector_label": 4, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0186_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0186_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..65bc7e14a1711c28299ccf232ec6b67ff38a5ce5 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0186_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0186_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.29862194938794, + "lat": 23.803719498765567 + }, + "bbox": [ + 90.27404853403546, + 23.7812364586176, + 90.32319536474041, + 23.826202538913535 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0186_hard_negative_water_urban_packet.png", + "sha256": "3d57e8d0ffd3498f341cdc10a73c33a201be5d4c8237fcd06e1ed82bc0be37ca", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0186_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0186_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0186_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0186_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0186_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0186_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0186_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 55.4234, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 153479, + "min": 6.9056, + "max": 148.539, + "mean": 23.5607, + "median": 21.6148, + "p90": 29.5297 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 288, + "schools_waterpoints": 5, + "urban_landuse": 10578, + "water_surface": 133, + "waterways": 10 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0187_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0187_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..c2186a825e4e52c4d0e53f7960e4e22d19aa4ecb --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0187_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0187_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.42696497234313, + "lat": 23.839267603055667 + }, + "bbox": [ + 90.40238482489524, + 23.8167845629077, + 90.45154511979102, + 23.861750643203635 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0187_hard_negative_water_urban_packet.png", + "sha256": "8228fe34a55bee365b78a133dcca54653a3120e536e77cdf5bde01a1f5a6d612", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0187_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0187_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0187_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0187_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0187_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0187_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0187_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 55.8269, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 186469, + "min": 0.9245, + "max": 231.8075, + "mean": 61.3877, + "median": 65.5433, + "p90": 131.276 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 42, + "major_roads": 1145, + "schools_waterpoints": 35, + "urban_landuse": 28078, + "water_surface": 137, + "waterways": 9 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0188_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0188_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..108bfce042c0414ddda13dcb31e14597c2dcca16 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0188_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0188_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.30473424439637, + "lat": 23.71006301472884 + }, + "bbox": [ + 90.28017850282133, + 23.68757997458087, + 90.32928998597141, + 23.732546054876806 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0188_hard_negative_water_urban_packet.png", + "sha256": "55b1df1128a06379ab2142aeb8858f994044507cf045386797a8fe6eefc8c29f", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0188_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0188_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0188_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0188_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0188_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0188_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0188_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 58.8547, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 259731, + "min": 6.1842, + "max": 20.7835, + "mean": 9.6672, + "median": 9.2292, + "p90": 12.4416 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 210, + "schools_waterpoints": 8, + "urban_landuse": 14157, + "water_surface": 244, + "waterways": 29 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0190_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0190_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..3d455c9c4cf1e5056816c73b16e4ecaec0453339 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0190_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0190_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.47089638035348, + "lat": 23.68418318177554 + }, + "bbox": [ + 90.44634550647791, + 23.661700141627573, + 90.49544725422905, + 23.70666622192351 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0190_hard_negative_water_urban_packet.png", + "sha256": "b325a666f4414156c7a4be2550894a3419ca380eb38a3427c55e98bd2905c4b3", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0190_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0190_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0190_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0190_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0190_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0190_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0190_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 50.6828, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 248679, + "min": 0.0, + "max": 522.6476, + "mean": 135.8886, + "median": 84.2223, + "p90": 300.9154 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 1021, + "schools_waterpoints": 12, + "urban_landuse": 54632, + "water_surface": 523, + "waterways": 42 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0191_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0191_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..11f0c754bc0830478d2f0b986427254a5ec5f344 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0191_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0191_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.36684205323735, + "lat": 23.96631154495506 + }, + "bbox": [ + 90.34223773858054, + 23.943828504807094, + 90.39144636789416, + 23.98879458510303 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0191_hard_negative_water_urban_packet.png", + "sha256": "1dbf0d728c26270e3a1e9a945d9a471b7b63519a213572bf006149cbe2e272dd", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0191_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0191_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0191_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0191_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0191_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0191_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0191_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 54.1859, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 233372, + "min": 13.9583, + "max": 110.0537, + "mean": 37.0397, + "median": 35.5903, + "p90": 54.1924 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 28, + "major_roads": 325, + "schools_waterpoints": 28, + "urban_landuse": 44075, + "water_surface": 372, + "waterways": 5 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0192_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0192_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..a1bb510fc43f9a74eddb0a1412b124db2047e0db --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0192_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0192_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.38967591982477, + "lat": 24.024822377485894 + }, + "bbox": [ + 90.36506041809743, + 24.002339337337926, + 90.41429142155211, + 24.04730541763386 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0192_hard_negative_water_urban_packet.png", + "sha256": "ecfea5d309a2a59613995ffe8b966828df8c20cf418be3d3ccf630534cdbe1ca", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0192_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0192_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0192_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0192_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0192_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0192_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0192_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 55.7155, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 235616, + "min": 13.3095, + "max": 58.3691, + "mean": 24.9664, + "median": 22.505, + "p90": 36.8819 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 12, + "major_roads": 170, + "schools_waterpoints": 11, + "urban_landuse": 20416, + "water_surface": 0, + "waterways": 1 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0193_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0193_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..df4fb0611ba16663c11264486be1e533c0cded51 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0193_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0193_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.37870727433561, + "lat": 23.972437373034168 + }, + "bbox": [ + 90.35410179012055, + 23.9499543328862, + 90.40331275855067, + 23.994920413182136 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0193_hard_negative_water_urban_packet.png", + "sha256": "9cf3c5ebafd0b5cb926e61f58386e92c0af89b69c4a0a673de21e4bc86cce4cc", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0193_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0193_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0193_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0193_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0193_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0193_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0193_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 54.7372, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 258584, + "min": 19.8786, + "max": 92.7436, + "mean": 38.0391, + "median": 36.5617, + "p90": 53.383 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 29, + "major_roads": 376, + "schools_waterpoints": 35, + "urban_landuse": 49727, + "water_surface": 357, + "waterways": 4 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0194_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0194_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..1d284a4baeec824516c42f78e274c9a66133b2e2 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0194_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0194_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.3774392837708, + "lat": 23.821825509321346 + }, + "bbox": [ + 90.35286244114738, + 23.79934246917338, + 90.40201612639422, + 23.844308549469314 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0194_hard_negative_water_urban_packet.png", + "sha256": "61d8d379498d6e31f11584658622f749819de7155dc2bd92683e7c879d7dbad5", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0194_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0194_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0194_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0194_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0194_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0194_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0194_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 54.0259, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 200792, + "min": 1.0612, + "max": 1136.6388, + "mean": 200.6185, + "median": 100.3795, + "p90": 525.0361 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 680, + "major_roads": 2634, + "schools_waterpoints": 413, + "urban_landuse": 59971, + "water_surface": 206, + "waterways": 30 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0195_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0195_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..2bfd09ba9c26fa9770ef65508e598504457ba1bc --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0195_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0195_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.49852499656657, + "lat": 23.64490359736024 + }, + "bbox": [ + 90.47398149747853, + 23.622420557212273, + 90.52306849565461, + 23.66738663750821 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0195_hard_negative_water_urban_packet.png", + "sha256": "7027e916f5f5054ee7f50119d720b5193875ea80e448233f57fee91132f0e067", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0195_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0195_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0195_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0195_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0195_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0195_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0195_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 53.3446, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 197065, + "min": 34.94, + "max": 203.4588, + "mean": 105.563, + "median": 109.1634, + "p90": 156.9107 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 2, + "major_roads": 500, + "schools_waterpoints": 4, + "urban_landuse": 55966, + "water_surface": 303, + "waterways": 28 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0196_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0196_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..8a781b94844af9a4fb36b089076146151464a9a6 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0196_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0196_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.42011061215378, + "lat": 23.765720812671212 + }, + "bbox": [ + 90.39554437845734, + 23.743237772523244, + 90.44467684585021, + 23.78820385281918 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0196_hard_negative_water_urban_packet.png", + "sha256": "7dfcff59b4bf150fcf8453a80aef0acac53114bc7cfb613a1c3a008e5edf2e96", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0196_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0196_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0196_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0196_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0196_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0196_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0196_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 47.4935, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 221809, + "min": 79.8279, + "max": 637.9122, + "mean": 322.5904, + "median": 313.2843, + "p90": 507.987 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 502, + "major_roads": 2529, + "schools_waterpoints": 730, + "urban_landuse": 63178, + "water_surface": 97, + "waterways": 16 + }, + "label_counts": { + "vector_label": 4, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0197_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0197_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..78b2d8ec6c1cbc12911de32d85642497211dd750 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0197_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0197_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.39031548012365, + "lat": 23.737524429261168 + }, + "bbox": [ + 90.36575456577977, + 23.7150413891132, + 90.41487639446753, + 23.760007469409135 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0197_hard_negative_water_urban_packet.png", + "sha256": "6357a97ed1d91d855a8f31c86aa941bbcf437ff9c1c5042b336c7cc946921e1e", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0197_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0197_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0197_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0197_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0197_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0197_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0197_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 49.0089, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 256464, + "min": 57.788, + "max": 1100.9924, + "mean": 332.8098, + "median": 286.9366, + "p90": 591.6512 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 469, + "major_roads": 2634, + "schools_waterpoints": 502, + "urban_landuse": 55682, + "water_surface": 82, + "waterways": 1111 + }, + "label_counts": { + "vector_label": 13, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0198_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0198_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..17c17b7f560b4bc7e5d400b61609c7921ce956ed --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0198_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0198_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.4086026915479, + "lat": 23.69414344728446 + }, + "bbox": [ + 90.38404994508214, + 23.671660407136493, + 90.43315543801366, + 23.71662648743243 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0198_hard_negative_water_urban_packet.png", + "sha256": "a65bbbb7d3b00b5541ec2e53b27d880c517de785bbd43a0b6374bc3c0a4bbe66", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0198_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0198_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0198_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0198_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0198_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0198_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0198_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 52.2397, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 254367, + "min": 0.0, + "max": 1023.7452, + "mean": 141.5314, + "median": 115.0836, + "p90": 332.3666 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 229, + "major_roads": 1718, + "schools_waterpoints": 160, + "urban_landuse": 59785, + "water_surface": 87, + "waterways": 583 + }, + "label_counts": { + "vector_label": 6, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0199_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0199_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..1de7dbac491f04b55df597ffa15214261098c766 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0199_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0199_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.48021847021832, + "lat": 23.700585114251794 + }, + "bbox": [ + 90.45566451213293, + 23.678102074103826, + 90.50477242830371, + 23.723068154399762 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0199_hard_negative_water_urban_packet.png", + "sha256": "83a1bbd8b7cfefbbb9cf7fe9165ebf4e65876293f2b13af0afd638fd5a86deb4", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0199_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0199_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0199_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0199_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0199_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0199_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0199_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 50.9845, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 252549, + "min": 42.1671, + "max": 612.6677, + "mean": 158.7146, + "median": 116.7967, + "p90": 357.6744 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 970, + "schools_waterpoints": 6, + "urban_landuse": 52245, + "water_surface": 382, + "waterways": 48 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0200_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0200_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..fb28d542396ce4370ff2b162e1e0ef11468f210b --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0200_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0200_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.37467125255921, + "lat": 23.712255440047567 + }, + "bbox": [ + 90.35011509829525, + 23.6897723998996, + 90.39922740682317, + 23.734738480195535 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0200_hard_negative_water_urban_packet.png", + "sha256": "a267e82f15dc404432968fa1b92918ecf4b49ddd4bc2423d998a2f8428027122", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0200_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0200_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0200_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0200_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0200_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0200_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0200_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 53.3104, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 225243, + "min": 16.3795, + "max": 771.6037, + "mean": 181.3893, + "median": 108.3334, + "p90": 509.5058 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 60, + "major_roads": 1324, + "schools_waterpoints": 199, + "urban_landuse": 63544, + "water_surface": 115, + "waterways": 194 + }, + "label_counts": { + "vector_label": 5, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0201_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0201_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..44bcbcd2d85bec2b38363183896b482cb4929f19 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0201_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0201_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.40873491467181, + "lat": 23.86689612583069 + }, + "bbox": [ + 90.3841495258522, + 23.84441308568272, + 90.43332030349143, + 23.889379165978657 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0201_hard_negative_water_urban_packet.png", + "sha256": "a4f3f9eab0cc5fc76937ff98b88ac8d44ab743fe2084c0c7e282e017a73ba317", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0201_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0201_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0201_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0201_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0201_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0201_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0201_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 52.9807, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 245169, + "min": 1.0007, + "max": 316.2981, + "mean": 97.9684, + "median": 93.4618, + "p90": 198.1122 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 121, + "major_roads": 1296, + "schools_waterpoints": 72, + "urban_landuse": 50137, + "water_surface": 143, + "waterways": 6 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0202_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0202_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..a5eadd031937a56311c51ef3472b56d86c824786 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0202_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0202_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.32019981262528, + "lat": 23.752785604634425 + }, + "bbox": [ + 90.29563602022851, + 23.730302564486458, + 90.34476360502204, + 23.775268644782393 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0202_hard_negative_water_urban_packet.png", + "sha256": "46773211315941e154aa12f981bcd62056c6dfc170ab61767895102121621ac2", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0202_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0202_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0202_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0202_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0202_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0202_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0202_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 57.2191, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 180045, + "min": 8.803, + "max": 223.2087, + "mean": 22.0635, + "median": 14.2393, + "p90": 43.9397 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 2, + "major_roads": 602, + "schools_waterpoints": 8, + "urban_landuse": 22497, + "water_surface": 79, + "waterways": 20 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0203_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0203_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..605f7adbb69c81117a23560b7a0490fc1fe3e069 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0203_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0203_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.35314985772392, + "lat": 23.75979251801414 + }, + "bbox": [ + 90.32858474310754, + 23.737309477866173, + 90.3777149723403, + 23.78227555816211 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0203_hard_negative_water_urban_packet.png", + "sha256": "e0dd123edbc64bffc466a1e6dce017312e9e433555aaf6de733675665349765f", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0203_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0203_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0203_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0203_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0203_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0203_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0203_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 53.3797, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 163789, + "min": 19.3398, + "max": 552.7133, + "mean": 282.7594, + "median": 297.036, + "p90": 440.2696 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 815, + "major_roads": 2157, + "schools_waterpoints": 254, + "urban_landuse": 45163, + "water_surface": 49, + "waterways": 35 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0204_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0204_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..f68b578ca6122b548fca83ce53868b759461f1cb --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0204_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0204_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.45430532065842, + "lat": 23.84566949015807 + }, + "bbox": [ + 90.4297239594244, + 23.823186450010102, + 90.47888668189245, + 23.868152530306038 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0204_hard_negative_water_urban_packet.png", + "sha256": "aed32cc536ee0af86428c38789b9ba5e24e26ba413bd2af75ed1ec039e8a5212", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0204_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0204_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0204_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0204_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0204_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0204_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0204_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 55.672, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 126363, + "min": 4.0466, + "max": 143.3111, + "mean": 48.7382, + "median": 44.3102, + "p90": 89.4608 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 673, + "schools_waterpoints": 9, + "urban_landuse": 11400, + "water_surface": 85, + "waterways": 16 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0205_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0205_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..0f2a477006a3d49d73eab4738c93ea9d16ccc6ba --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0205_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0205_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.37943687085318, + "lat": 23.956070769853422 + }, + "bbox": [ + 90.35483451051422, + 23.933587729705454, + 90.40403923119214, + 23.97855381000139 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0205_hard_negative_water_urban_packet.png", + "sha256": "d196b440c4dcc08cbac46d2d785661bcc048423da01aa468ac6d8007749418a2", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0205_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0205_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0205_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0205_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0205_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0205_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0205_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 54.7323, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 250037, + "min": 15.0584, + "max": 110.2486, + "mean": 40.6941, + "median": 36.5999, + "p90": 63.5623 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 29, + "major_roads": 377, + "schools_waterpoints": 23, + "urban_landuse": 48765, + "water_surface": 405, + "waterways": 12 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0206_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0206_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..d70bbae132e970f3d4961e64639624be66519f4f --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0206_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0206_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.36808144048192, + "lat": 23.954093528552786 + }, + "bbox": [ + 90.34347945734729, + 23.931610488404818, + 90.39268342361655, + 23.976576568700754 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0206_hard_negative_water_urban_packet.png", + "sha256": "ed0acf1a0053af8aa5636eb5c9d62a276dc577bfd753fbdf58796b3233581d89", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0206_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0206_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0206_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0206_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0206_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0206_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0206_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 53.2713, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 228173, + "min": 14.6347, + "max": 110.0109, + "mean": 38.4094, + "median": 35.3279, + "p90": 63.1251 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 26, + "major_roads": 318, + "schools_waterpoints": 22, + "urban_landuse": 42481, + "water_surface": 364, + "waterways": 9 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0207_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0207_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..af18e7ab227295aa8ed42137f7d4e687adc0212b --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0207_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0207_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.39941794838711, + "lat": 23.767707479502786 + }, + "bbox": [ + 90.37485133958732, + 23.745224439354818, + 90.4239845571869, + 23.790190519650753 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0207_hard_negative_water_urban_packet.png", + "sha256": "e99d72b9876dbbe7b490e45f3e298b0d91f4b1aa5be26f2a2690fdf1c3d08ad9", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0207_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0207_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0207_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0207_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0207_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0207_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0207_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 48.3808, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 244248, + "min": 80.0448, + "max": 580.302, + "mean": 277.9549, + "median": 270.5892, + "p90": 423.6526 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 424, + "major_roads": 2343, + "schools_waterpoints": 712, + "urban_landuse": 47263, + "water_surface": 64, + "waterways": 10 + }, + "label_counts": { + "vector_label": 4, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0210_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0210_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..28cb5e2aeb253c5306d9e9c39b1949b0d134a80e --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0210_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0210_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.24848134415127, + "lat": 23.815300352639007 + }, + "bbox": [ + 90.22390573706211, + 23.79281731249104, + 90.27305695124043, + 23.837783392786974 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0210_hard_negative_water_urban_packet.png", + "sha256": "94386516411d7244ee0a280f113b2c15b35546bc3a4c81caec2aa065ddbf0e5f", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0210_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0210_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0210_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0210_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0210_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0210_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0210_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 56.6286, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 236041, + "min": 15.0718, + "max": 97.8016, + "mean": 27.9181, + "median": 26.6537, + "p90": 38.0343 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 14, + "major_roads": 455, + "schools_waterpoints": 20, + "urban_landuse": 24624, + "water_surface": 174, + "waterways": 7 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0211_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0211_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..402b4cfb844c4512a1fb99a600cd3ca6713e4a05 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0211_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0211_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.41749449513068, + "lat": 23.72653699575471 + }, + "bbox": [ + 90.39293565137311, + 23.704053955606742, + 90.44205333888826, + 23.749020035902678 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0211_hard_negative_water_urban_packet.png", + "sha256": "ba4a58fa085440e97984c3e4bc44fd2e8b01aca16645647504f1257564830466", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0211_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0211_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0211_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0211_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0211_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0211_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0211_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 47.4643, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 256996, + "min": 0.0, + "max": 1102.5665, + "mean": 304.797, + "median": 282.589, + "p90": 525.8365 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 407, + "major_roads": 2787, + "schools_waterpoints": 310, + "urban_landuse": 60242, + "water_surface": 83, + "waterways": 1495 + }, + "label_counts": { + "vector_label": 15, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0212_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0212_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..e39195ec3557623d799d58a87af4c6ceea4c4be2 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0212_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0212_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.37893418914902, + "lat": 23.956957183496318 + }, + "bbox": [ + 90.35433165969296, + 23.93447414334835, + 90.40353671860508, + 23.979440223644286 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0212_hard_negative_water_urban_packet.png", + "sha256": "3f48925b652c6f2836f051d056b3ae3b593c2ec650df734706a582702616e4e8", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0212_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0212_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0212_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0212_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0212_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0212_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0212_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 54.86, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 250616, + "min": 15.2486, + "max": 110.0209, + "mean": 40.3557, + "median": 36.4353, + "p90": 62.9294 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 29, + "major_roads": 373, + "schools_waterpoints": 23, + "urban_landuse": 48534, + "water_surface": 410, + "waterways": 11 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0213_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0213_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..20475815a68315703fc22cb3ca0b8bf6d4c258f1 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0213_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0213_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.27475547500947, + "lat": 23.84033073317932 + }, + "bbox": [ + 90.25017512602359, + 23.817847693031354, + 90.29933582399535, + 23.86281377332729 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0213_hard_negative_water_urban_packet.png", + "sha256": "46aa843310cc35e0e6d1c31795b2a3035d87591fd2c0252228771ee61249e403", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0213_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0213_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0213_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0213_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0213_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0213_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0213_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 55.7406, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 245932, + "min": 11.0029, + "max": 129.008, + "mean": 29.7904, + "median": 23.9467, + "p90": 52.7033 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 75, + "major_roads": 916, + "schools_waterpoints": 26, + "urban_landuse": 38123, + "water_surface": 146, + "waterways": 11 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0214_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0214_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..d73e0997d984bf7d1aeab1e3cc574231c7ce6a56 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0214_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0214_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.51317758388649, + "lat": 23.70193047560729 + }, + "bbox": [ + 90.48862337269644, + 23.679447435459323, + 90.53773179507654, + 23.72441351575526 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0214_hard_negative_water_urban_packet.png", + "sha256": "41e3b5a8613ea3e119e7d3f19f1633cd53da85461363af6d2488fcbfb1f4dc21", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0214_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0214_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0214_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0214_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0214_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0214_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0214_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 49.7405, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 113223, + "min": 42.6234, + "max": 191.8529, + "mean": 108.7015, + "median": 104.7911, + "p90": 153.557 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 2, + "major_roads": 438, + "schools_waterpoints": 1, + "urban_landuse": 26233, + "water_surface": 165, + "waterways": 16 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0215_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0215_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..13cf90b36915dfb7d98dec0a7690fe682ce4d599 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0215_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0215_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.19578577132869, + "lat": 23.98936254024293 + }, + "bbox": [ + 90.17117705367829, + 23.96687950009496, + 90.22039448897908, + 24.011845580390897 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0215_hard_negative_water_urban_packet.png", + "sha256": "1db218f36669d4bb58d7ef4b581bd168914b4f5ab8c0ed036daf5d3f3b5cd0af", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0215_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0215_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0215_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0215_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0215_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0215_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0215_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 53.6199, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 243844, + "min": 4.1848, + "max": 14.357, + "mean": 7.773, + "median": 7.6965, + "p90": 11.2234 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 134, + "schools_waterpoints": 4, + "urban_landuse": 11557, + "water_surface": 208, + "waterways": 7 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0216_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0216_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..2dce3dcddb7bb259a0e0edc6fc2da2c8904341ea --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0216_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0216_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.24537982146475, + "lat": 24.018936791679547 + }, + "bbox": [ + 90.22076544666272, + 23.99645375153158, + 90.26999419626678, + 24.041419831827515 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0216_hard_negative_water_urban_packet.png", + "sha256": "8fe37c6ed842c73d8c88c65caa114aa51b251248f1feedd289e190095a8f1c24", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0216_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0216_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0216_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0216_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0216_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0216_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0216_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 53.0392, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 238327, + "min": 3.521, + "max": 22.2505, + "mean": 12.7368, + "median": 12.1315, + "p90": 17.5039 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 8, + "major_roads": 213, + "schools_waterpoints": 17, + "urban_landuse": 13180, + "water_surface": 128, + "waterways": 5 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0217_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0217_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..a300ebcdd25ccc5fab4c564f690b5fe91d258f03 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0217_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0217_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.36844939586982, + "lat": 23.790924898829058 + }, + "bbox": [ + 90.34387840034024, + 23.76844185868109, + 90.39302039139939, + 23.813407938977026 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0217_hard_negative_water_urban_packet.png", + "sha256": "f5e1142e4c783d54b49646b9e99b320a1fda7d58ee3f9f54eaf3c1fbb5067fc6", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0217_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0217_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0217_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0217_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0217_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0217_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0217_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 51.7799, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 240628, + "min": 71.367, + "max": 1148.3505, + "mean": 343.3671, + "median": 305.0359, + "p90": 543.9404 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 847, + "major_roads": 3279, + "schools_waterpoints": 247, + "urban_landuse": 61955, + "water_surface": 93, + "waterways": 30 + }, + "label_counts": { + "vector_label": 2, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0220_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0220_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..42c616c2499fc487acf48fe447c9287a4c0a50a2 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0220_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0220_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.25126245685938, + "lat": 23.997081590707964 + }, + "bbox": [ + 90.22665226354286, + 23.974598550559996, + 90.2758726501759, + 24.019564630855932 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0220_hard_negative_water_urban_packet.png", + "sha256": "872bfd343bea430f744c49a3f2bddad01ae9bacbe5a713fda5f283c546d30baf", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0220_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0220_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0220_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0220_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0220_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0220_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0220_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 54.3809, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 250877, + "min": 5.9627, + "max": 48.48, + "mean": 17.8224, + "median": 17.29, + "p90": 25.11 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 8, + "major_roads": 432, + "schools_waterpoints": 11, + "urban_landuse": 18232, + "water_surface": 197, + "waterways": 9 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0221_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0221_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..290cfaabce0ec49a124a2769ae92b74d821d4b5d --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0221_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0221_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.28527918853275, + "lat": 23.73095492156249 + }, + "bbox": [ + 90.2607195123658, + 23.70847188141452, + 90.30983886469971, + 23.753437961710457 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0221_hard_negative_water_urban_packet.png", + "sha256": "aafcbf080230ee8038a8bdf4dbe7eb558c9bbc69b6e0800a0732faab1cf9196e", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0221_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0221_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0221_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0221_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0221_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0221_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0221_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 57.4747, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 251937, + "min": 5.1785, + "max": 13.8224, + "mean": 8.4737, + "median": 8.3703, + "p90": 10.5848 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 144, + "schools_waterpoints": 1, + "urban_landuse": 12667, + "water_surface": 135, + "waterways": 23 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0222_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0222_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..67c9114c8e8c68362458c5abd0bcb92cdf9fda41 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0222_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0222_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.45702602539663, + "lat": 23.719238599724065 + }, + "bbox": [ + 90.43246855633264, + 23.696755559576097, + 90.48158349446062, + 23.741721639872033 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0222_hard_negative_water_urban_packet.png", + "sha256": "ba287d36e5dfc4ddd6c09f30e98ab9c8d4af91e1945faf2ce2ac33cdd3268edc", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0222_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0222_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0222_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0222_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0222_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0222_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0222_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 51.8909, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 233382, + "min": 34.2287, + "max": 612.5013, + "mean": 218.8947, + "median": 186.4198, + "p90": 426.5498 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 38, + "major_roads": 964, + "schools_waterpoints": 39, + "urban_landuse": 43038, + "water_surface": 115, + "waterways": 43 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0223_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0223_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..1cba1873b2def881435cdeca73ed735780ad162c --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0223_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0223_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.33281045162349, + "lat": 23.778885701217828 + }, + "bbox": [ + 90.3082417314949, + 23.75640266106986, + 90.35737917175207, + 23.801368741365796 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0223_hard_negative_water_urban_packet.png", + "sha256": "e755944cf589789b27e64940d978ed615edf00085c23694de565e0a7d3a40eaf", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0223_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0223_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0223_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0223_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0223_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0223_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0223_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 54.3338, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 141079, + "min": 10.6669, + "max": 1112.0454, + "mean": 149.7861, + "median": 144.5152, + "p90": 338.225 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 287, + "major_roads": 1376, + "schools_waterpoints": 93, + "urban_landuse": 37087, + "water_surface": 72, + "waterways": 15 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0224_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0224_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..6e6137f4fed9bc1acf92119e03aba52acfb16040 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0224_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0224_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.48108457828016, + "lat": 23.73993062393687 + }, + "bbox": [ + 90.45652321032075, + 23.717447583788903, + 90.50564594623957, + 23.76241366408484 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0224_hard_negative_water_urban_packet.png", + "sha256": "b49536c3aae96b1ea2c8de82192127420f915db98ed909d7311a7c05af5cde5f", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0224_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0224_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0224_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0224_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0224_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0224_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0224_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 57.3827, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 200471, + "min": 5.1646, + "max": 466.4113, + "mean": 70.462, + "median": 54.548, + "p90": 141.4869 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 5, + "major_roads": 219, + "schools_waterpoints": 5, + "urban_landuse": 11639, + "water_surface": 134, + "waterways": 12 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0225_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0225_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..cdd34738d9e8729b5f34897419b8534efb03cea6 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0225_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0225_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.31676281709937, + "lat": 23.84687336738115 + }, + "bbox": [ + 90.29218122756475, + 23.824390327233182, + 90.341344406634, + 23.869356407529118 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0225_hard_negative_water_urban_packet.png", + "sha256": "6b2888e2f105a82259cb71624b745b35dab447662eb50cff6b0677fb773a724c", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0225_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0225_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0225_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0225_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0225_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0225_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0225_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 53.1253, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 186550, + "min": 8.1537, + "max": 52.3963, + "mean": 15.3968, + "median": 14.8231, + "p90": 19.3577 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 2, + "major_roads": 379, + "schools_waterpoints": 5, + "urban_landuse": 9692, + "water_surface": 86, + "waterways": 20 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0226_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0226_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..662beed0ef24f8482cec7c5fe845fea16ea38c3b --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0226_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0226_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.41363585383255, + "lat": 23.761405922491516 + }, + "bbox": [ + 90.38907043469108, + 23.738922882343548, + 90.43820127297401, + 23.783888962639484 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0226_hard_negative_water_urban_packet.png", + "sha256": "0d21f3c63653f00b090662a6590a5b56cbdff2390e870035d834f4fe3c498ed4", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0226_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0226_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0226_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0226_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0226_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0226_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0226_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 45.7226, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 237827, + "min": 74.6889, + "max": 637.6664, + "mean": 326.9223, + "median": 309.1183, + "p90": 501.8129 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 473, + "major_roads": 2748, + "schools_waterpoints": 584, + "urban_landuse": 56627, + "water_surface": 71, + "waterways": 15 + }, + "label_counts": { + "vector_label": 4, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0227_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0227_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..053a35c22f21c13cb1fbc105ed9493044d6d1482 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0227_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0227_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.28694119652754, + "lat": 23.90678443544435 + }, + "bbox": [ + 90.2623482265128, + 23.884301395296383, + 90.31153416654227, + 23.92926747559232 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0227_hard_negative_water_urban_packet.png", + "sha256": "3bc7928f76af227cf7be3996852e6fd691097e265c221c612755a5696dc098ce", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0227_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0227_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0227_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0227_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0227_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0227_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0227_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 54.8813, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 257060, + "min": 11.0185, + "max": 33.9424, + "mean": 19.0851, + "median": 18.8887, + "p90": 24.17 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 19, + "major_roads": 708, + "schools_waterpoints": 21, + "urban_landuse": 29844, + "water_surface": 151, + "waterways": 6 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0228_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0228_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..4b2083cc0df14f09cee563efdd90988a70730448 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0228_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0228_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.29293446752536, + "lat": 23.9033701832552 + }, + "bbox": [ + 90.2683421470748, + 23.88088714310723, + 90.31752678797591, + 23.925853223403166 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0228_hard_negative_water_urban_packet.png", + "sha256": "ed77cf19a0d055c22a0f7c78891174dfed0ff7e118b658cfa4ee1f82c1969b8f", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0228_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0228_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0228_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0228_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0228_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0228_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0228_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 54.9522, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 258620, + "min": 11.0173, + "max": 30.5413, + "mean": 17.5961, + "median": 17.5837, + "p90": 21.0655 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 7, + "major_roads": 633, + "schools_waterpoints": 11, + "urban_landuse": 27903, + "water_surface": 113, + "waterways": 1 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0229_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0229_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..b9b8c96e9652c729e07fec5570d073f449b022f8 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0229_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0229_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.42151721671472, + "lat": 23.780176297460116 + }, + "bbox": [ + 90.39694825273631, + 23.757693257312148, + 90.44608618069313, + 23.802659337608084 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0229_hard_negative_water_urban_packet.png", + "sha256": "b67173481167caf79e015bf795240fa2ba5babd7cc80f49bc4f06d5e618cef60", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0229_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0229_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0229_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0229_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0229_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0229_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0229_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 49.479, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 207903, + "min": 51.5954, + "max": 638.6638, + "mean": 269.3436, + "median": 239.5203, + "p90": 471.1935 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 308, + "major_roads": 2080, + "schools_waterpoints": 563, + "urban_landuse": 54439, + "water_surface": 107, + "waterways": 21 + }, + "label_counts": { + "vector_label": 6, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0230_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0230_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..f2b2ca1000be92fc5ff5129ac8fbe46f24d65595 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0230_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0230_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.50519558694329, + "lat": 23.589927159050696 + }, + "bbox": [ + 90.48066238295294, + 23.567444118902728, + 90.52972879093363, + 23.612410199198663 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0230_hard_negative_water_urban_packet.png", + "sha256": "5b7134b3cf229dd244c0cd2ae6cf741f4bab271dd089748e96a9f61ccb310f8f", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0230_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0230_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0230_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0230_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0230_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0230_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0230_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 51.8073, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 166804, + "min": 0.0, + "max": 158.4037, + "mean": 66.4121, + "median": 71.1781, + "p90": 125.4618 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 2, + "major_roads": 269, + "schools_waterpoints": 5, + "urban_landuse": 24765, + "water_surface": 44, + "waterways": 17 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0231_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0231_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..013159331d41682a665a57b6bed1e8511480fabf --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0231_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0231_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.49512634296525, + "lat": 23.58719821690843 + }, + "bbox": [ + 90.47059364919372, + 23.564715176760462, + 90.51965903673678, + 23.609681257056398 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0231_hard_negative_water_urban_packet.png", + "sha256": "48826a2af414dc91b290aba31edab5883186db4cf02e7f5d1da67024557573a7", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0231_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0231_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0231_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0231_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0231_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0231_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0231_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 50.6667, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 218578, + "min": 0.0, + "max": 147.5881, + "mean": 56.6115, + "median": 56.8258, + "p90": 115.0866 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 2, + "major_roads": 264, + "schools_waterpoints": 5, + "urban_landuse": 25770, + "water_surface": 43, + "waterways": 14 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0232_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0232_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..ea61df59f8f3d3b9dcf4994ac73b66042496a4c7 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0232_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0232_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.414825607402, + "lat": 23.797552553147305 + }, + "bbox": [ + 90.39025335860687, + 23.775069512999337, + 90.43939785619712, + 23.820035593295273 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0232_hard_negative_water_urban_packet.png", + "sha256": "6efd92558b316c2914e7c117d35f59e2c78f5e12cc3e58671ad3d80ae61f7230", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0232_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0232_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0232_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0232_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0232_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0232_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0232_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 49.4909, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 232560, + "min": 4.2819, + "max": 597.7048, + "mean": 189.2362, + "median": 158.1823, + "p90": 354.0785 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 268, + "major_roads": 1912, + "schools_waterpoints": 511, + "urban_landuse": 49466, + "water_surface": 177, + "waterways": 12 + }, + "label_counts": { + "vector_label": 7, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0233_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0233_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..63e8add7f84570c914d5117dcb79c7d095b5fc73 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0233_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0233_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.0222693234653, + "lat": 24.028585863200433 + }, + "bbox": [ + 89.99765310094531, + 24.006102823052466, + 90.04688554598528, + 24.0510689033484 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0233_hard_negative_water_urban_packet.png", + "sha256": "1164d3a9590c2bed4a00f30bc3138d598b07c122489b2b58e5f2d6c3651a97db", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0233_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0233_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0233_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0233_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0233_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0233_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0233_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 55.9132, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 159152, + "min": 4.0284, + "max": 10.399, + "mean": 5.8817, + "median": 5.8081, + "p90": 7.9619 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 33, + "schools_waterpoints": 0, + "urban_landuse": 2564, + "water_surface": 26, + "waterways": 1 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0234_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0234_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..cbd1c04b7ef215b806f204b589b3aec451e424cf --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0234_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0234_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.24581076893752, + "lat": 23.827044460544684 + }, + "bbox": [ + 90.22123293779015, + 23.804561420396716, + 90.27038860008489, + 23.849527500692652 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0234_hard_negative_water_urban_packet.png", + "sha256": "0ff2b3a05e9db17274576e6bbb3eb8b55bcc91735a55aebea25cc762e3cebaca", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0234_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0234_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0234_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0234_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0234_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0234_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0234_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 56.0983, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 239855, + "min": 11.7132, + "max": 129.2756, + "mean": 33.5399, + "median": 27.8389, + "p90": 58.2415 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 75, + "major_roads": 558, + "schools_waterpoints": 21, + "urban_landuse": 34005, + "water_surface": 147, + "waterways": 5 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0235_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0235_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..d6e55bd74316f2c0af2625458b5da8b643e444ad --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0235_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0235_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.44679628660833, + "lat": 23.794949139887258 + }, + "bbox": [ + 90.42222453016373, + 23.77246609973929, + 90.47136804305293, + 23.817432180035226 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0235_hard_negative_water_urban_packet.png", + "sha256": "ced4f3955cfb91d83d5ef6563c892fedb1f5a277dd5918f933ee90a7bafc4179", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0235_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0235_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0235_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0235_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0235_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0235_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0235_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 55.1219, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 108565, + "min": 7.176, + "max": 621.5939, + "mean": 237.9148, + "median": 197.6392, + "p90": 458.5645 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 76, + "major_roads": 1392, + "schools_waterpoints": 22, + "urban_landuse": 27506, + "water_surface": 102, + "waterways": 50 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0236_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0236_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..e57dbaa16b6271cc75f6e88088f657536afe0bd0 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0236_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0236_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.29432809497797, + "lat": 23.67506748560814 + }, + "bbox": [ + 90.26977893400797, + 23.65258444546017, + 90.31887725594797, + 23.697550525756107 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0236_hard_negative_water_urban_packet.png", + "sha256": "123a050b21c9adfc7b2defce501ceba5c73667381591ae906e076873870e60d7", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0236_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0236_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0236_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0236_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0236_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0236_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0236_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 57.3619, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 229950, + "min": 5.2822, + "max": 15.3469, + "mean": 9.0851, + "median": 8.5146, + "p90": 12.2373 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 111, + "schools_waterpoints": 0, + "urban_landuse": 9684, + "water_surface": 87, + "waterways": 7 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0237_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0237_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..30fa49b4595914626c9edff93e229665ceb33ea0 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0237_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0237_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.40105979014734, + "lat": 23.94504732833611 + }, + "bbox": [ + 90.37645953226273, + 23.92256428818814, + 90.42566004803196, + 23.967530368484077 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0237_hard_negative_water_urban_packet.png", + "sha256": "ec9d3652441b72c2d813bc50b3695b54abab47f7caa6ece437efc5535ee42749", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0237_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0237_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0237_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0237_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0237_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0237_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0237_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 54.6469, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 248419, + "min": 18.4348, + "max": 122.3905, + "mean": 41.4879, + "median": 34.9772, + "p90": 68.3947 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 26, + "major_roads": 352, + "schools_waterpoints": 20, + "urban_landuse": 39917, + "water_surface": 258, + "waterways": 14 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0238_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0238_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..ccf4530296bd51b98ffe0579443cab15b6da50f0 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0238_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0238_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.51213366088271, + "lat": 23.643534802847096 + }, + "bbox": [ + 90.48759041849956, + 23.62105176269913, + 90.53667690326586, + 23.666017842995064 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0238_hard_negative_water_urban_packet.png", + "sha256": "37dc54f288b5f0304ce96381b115ae6160ea523b22dc584ecde4c4d3fa9969a2", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0238_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0238_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0238_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0238_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0238_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0238_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0238_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 51.9302, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 129862, + "min": 9.0136, + "max": 204.4455, + "mean": 105.3736, + "median": 105.1351, + "p90": 160.2774 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 355, + "schools_waterpoints": 2, + "urban_landuse": 37096, + "water_surface": 130, + "waterways": 25 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0240_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0240_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..5ffb9785e659e3fecf848b09c8cdc451143dc0dc --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0240_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0240_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.4259169886639, + "lat": 23.72116800975774 + }, + "bbox": [ + 90.40135915623848, + 23.698684969609772, + 90.45047482108932, + 23.743651049905708 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0240_hard_negative_water_urban_packet.png", + "sha256": "7c1e6baa5714b9a570f67c71ecad48a6077f8fc0cbe4990c7ef90c678876a5b1", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0240_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0240_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0240_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0240_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0240_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0240_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0240_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 49.0471, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 249785, + "min": 0.0, + "max": 1104.7843, + "mean": 279.3456, + "median": 250.3973, + "p90": 415.6751 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 337, + "major_roads": 2338, + "schools_waterpoints": 255, + "urban_landuse": 59766, + "water_surface": 74, + "waterways": 960 + }, + "label_counts": { + "vector_label": 10, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0241_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0241_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..661d5af6b312d0a64f952b9ba077ff2c24aec5c8 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0241_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0241_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.39831604909207, + "lat": 23.878834288860688 + }, + "bbox": [ + 90.373728393038, + 23.85635124871272, + 90.42290370514615, + 23.901317329008656 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0241_hard_negative_water_urban_packet.png", + "sha256": "fd469fd85f5cb57484e1f68ad039b6b6e6a1b86b65d9a07dafd2fb0393d9cd58", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0241_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0241_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0241_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0241_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0241_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0241_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0241_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 50.5148, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 230007, + "min": 1.2338, + "max": 314.8239, + "mean": 124.3552, + "median": 120.2345, + "p90": 200.7769 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 52, + "major_roads": 1487, + "schools_waterpoints": 55, + "urban_landuse": 54716, + "water_surface": 108, + "waterways": 14 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0242_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0242_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..2c7ef75bf0dfd58980d0b489f9e74914abceef2c --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0242_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0242_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.43263131387032, + "lat": 24.002923975625446 + }, + "bbox": [ + 90.40802000323883, + 23.98044093547748, + 90.4572426245018, + 24.025407015773414 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0242_hard_negative_water_urban_packet.png", + "sha256": "64d4d30ea906d39992ff02047c8214c31f69c34071c30761e677edf95ea0966e", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0242_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0242_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0242_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0242_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0242_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0242_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0242_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 53.4325, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 242418, + "min": 5.5605, + "max": 112.0167, + "mean": 32.4857, + "median": 30.5858, + "p90": 55.4987 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 2, + "major_roads": 258, + "schools_waterpoints": 9, + "urban_landuse": 22114, + "water_surface": 9, + "waterways": 3 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0248_hard_negative_water_urban_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0248_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..f1deb5b0b670d8301119d8f980b6c6b48cf37e5a --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0248_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0248_hard_negative_water_urban", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.439250549355, + "lat": 23.68481749043286 + }, + "bbox": [ + 90.4146995562562, + 23.66233445028489, + 90.4638015424538, + 23.707300530580827 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0248_hard_negative_water_urban_packet.png", + "sha256": "a3309513956ea3cb6acabbf9e7777a72ec10d996eb1ca8dddc18bfe7c5f598c0", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0248_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0248_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0248_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0248_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0248_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0248_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0248_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 51.6591, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 243343, + "min": 0.0, + "max": 584.4011, + "mean": 158.2448, + "median": 146.8549, + "p90": 311.7973 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 127, + "major_roads": 1305, + "schools_waterpoints": 99, + "urban_landuse": 53583, + "water_surface": 151, + "waterways": 36 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0249_exposure_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0249_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..9c3279d3e7f44059895a939b39a50d34a9906027 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0249_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0249_exposure_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.41565266791804, + "lat": 23.793920916109542 + }, + "bbox": [ + 90.39108110590895, + 23.771437875961574, + 90.44022422992713, + 23.81640395625751 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0249_exposure_context_packet.png", + "sha256": "fe0cb10ecfe8f6563d355b0d307b9990b30c33b5805fff57a74ba803b65da529", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0249_exposure_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0249_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0249_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0249_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0249_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0249_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0249_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 49.5022, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 230424, + "min": 6.478, + "max": 625.7885, + "mean": 202.6361, + "median": 163.446, + "p90": 385.5048 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 273, + "major_roads": 1928, + "schools_waterpoints": 541, + "urban_landuse": 50089, + "water_surface": 163, + "waterways": 15 + }, + "label_counts": { + "vector_label": 7, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0250_exposure_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0250_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..4250cfe2c9a201d0cf4fbb8eae45478771ad5302 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0250_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0250_exposure_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.3721785875146, + "lat": 23.8091921790919 + }, + "bbox": [ + 90.34760413660281, + 23.786709138943934, + 90.39675303842638, + 23.83167521923987 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0250_exposure_context_packet.png", + "sha256": "3899a5e5f6a856ef7e38a05be2ab4b69126a845e92ca92370c01753740f43c4f", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0250_exposure_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0250_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0250_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0250_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0250_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0250_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0250_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 51.6344, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 230763, + "min": 1.6277, + "max": 1144.5718, + "mean": 312.9185, + "median": 257.9601, + "p90": 602.5109 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 866, + "major_roads": 3440, + "schools_waterpoints": 459, + "urban_landuse": 77551, + "water_surface": 163, + "waterways": 36 + }, + "label_counts": { + "vector_label": 2, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0251_exposure_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0251_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..8ace29072a02da659a013ef3f39786506cc38ddc --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0251_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0251_exposure_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.32468560017358, + "lat": 23.617345676108652 + }, + "bbox": [ + 90.30014726559087, + 23.594862635960684, + 90.3492239347563, + 23.63982871625662 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0251_exposure_context_packet.png", + "sha256": "86bf3324e68cddf0f9681241411ab3cb76efd6469642abd7c700c93b9763c09d", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0251_exposure_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0251_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0251_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0251_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0251_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0251_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0251_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 51.2393, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 241878, + "min": 8.6069, + "max": 17.2885, + "mean": 12.4548, + "median": 12.6078, + "p90": 14.8541 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 6, + "major_roads": 86, + "schools_waterpoints": 4, + "urban_landuse": 51, + "water_surface": 8, + "waterways": 3 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0253_exposure_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0253_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..c26492a6526017b6ff6904bf4874b3b7812a7954 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0253_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0253_exposure_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.3987366019872, + "lat": 23.908936111546673 + }, + "bbox": [ + 90.37414322255188, + 23.886453071398705, + 90.42332998142251, + 23.93141915169464 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0253_exposure_context_packet.png", + "sha256": "09255ad9d1583e96bde868406d701a8147cd6a2ca69d171a21c43abf970dfb52", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0253_exposure_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0253_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0253_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0253_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0253_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0253_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0253_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 52.2739, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 223783, + "min": 25.3564, + "max": 195.953, + "mean": 92.4195, + "median": 86.946, + "p90": 148.7617 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 36, + "major_roads": 787, + "schools_waterpoints": 161, + "urban_landuse": 53866, + "water_surface": 176, + "waterways": 9 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0254_exposure_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0254_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..bf7cad25d68a756e1348dc4b075e7015040dc4aa --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0254_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0254_exposure_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.35456112019034, + "lat": 23.798787871663524 + }, + "bbox": [ + 90.32998863775045, + 23.776304831515557, + 90.37913360263023, + 23.821270911811492 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0254_exposure_context_packet.png", + "sha256": "4f3b2a1ecbb87bf21cd90a9bd3c7b8db23ce37e0f1d11a77c18b99b3bedf6100", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0254_exposure_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0254_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0254_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0254_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0254_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0254_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0254_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 51.2709, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 210539, + "min": 48.0516, + "max": 1151.7723, + "mean": 330.4311, + "median": 277.5114, + "p90": 624.6413 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 636, + "major_roads": 3080, + "schools_waterpoints": 298, + "urban_landuse": 66491, + "water_surface": 64, + "waterways": 36 + }, + "label_counts": { + "vector_label": 2, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0257_exposure_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0257_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..a2be35e8a7967488a4425695f5e1ee504ff9a56c --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0257_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0257_exposure_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.40470835225017, + "lat": 23.76517149098213 + }, + "bbox": [ + 90.38014222226415, + 23.742688450834162, + 90.42927448223618, + 23.787654531130098 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0257_exposure_context_packet.png", + "sha256": "ec7a50fa4dcd1174cf1190067bbf07135d657b91ce467d7c1a4904f01ca41183", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0257_exposure_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0257_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0257_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0257_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0257_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0257_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0257_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 46.9587, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 244999, + "min": 80.0488, + "max": 621.7548, + "mean": 291.0086, + "median": 277.4919, + "p90": 454.2866 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 497, + "major_roads": 2524, + "schools_waterpoints": 735, + "urban_landuse": 54100, + "water_surface": 65, + "waterways": 11 + }, + "label_counts": { + "vector_label": 4, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0258_exposure_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0258_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..f0e18b44875ff1e61365ef72e2df03493b0d686b --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0258_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0258_exposure_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.40161842245392, + "lat": 23.708874083269734 + }, + "bbox": [ + 90.37706290465535, + 23.686391043121766, + 90.4261739402525, + 23.731357123417702 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0258_exposure_context_packet.png", + "sha256": "3676a5d769f7ce456a0bfe6f83d4897fb27c84aadd77f308fad2456d1a4c60bd", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0258_exposure_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0258_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0258_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0258_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0258_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0258_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0258_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 49.6541, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 251250, + "min": 0.0, + "max": 1104.4948, + "mean": 259.2599, + "median": 155.0499, + "p90": 594.3265 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 254, + "major_roads": 2378, + "schools_waterpoints": 264, + "urban_landuse": 74125, + "water_surface": 101, + "waterways": 1487 + }, + "label_counts": { + "vector_label": 16, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0260_exposure_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0260_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..b8b2bc0b834dc146beca72b5bd99dda1804d535b --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0260_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0260_exposure_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.40270157936655, + "lat": 23.920964532608277 + }, + "bbox": [ + 90.3781059102751, + 23.89848149246031, + 90.427297248458, + 23.943447572756245 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0260_exposure_context_packet.png", + "sha256": "afe577881c9085fbf07e257d342c6d3ea3140e20f965e7c182168fafe3c65f40", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0260_exposure_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0260_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0260_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0260_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0260_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0260_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0260_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 52.7518, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 225610, + "min": 20.7349, + "max": 180.2709, + "mean": 72.9242, + "median": 65.4326, + "p90": 127.6912 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 29, + "major_roads": 551, + "schools_waterpoints": 157, + "urban_landuse": 48071, + "water_surface": 195, + "waterways": 11 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0263_exposure_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0263_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..56cbca53135dd387c42087159b15a4b8f8dbe4fb --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0263_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0263_exposure_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.36256401623602, + "lat": 23.762372373233095 + }, + "bbox": [ + 90.33799841466703, + 23.739889333085127, + 90.38712961780502, + 23.784855413381063 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0263_exposure_context_packet.png", + "sha256": "4fb47b1b0c55114f2de4a62780c3e1168d293872f33fe19b36c70cc50a998b6a", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0263_exposure_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0263_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0263_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0263_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0263_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0263_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0263_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 51.8457, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 199804, + "min": 48.7318, + "max": 551.0926, + "mean": 293.4622, + "median": 290.2159, + "p90": 434.9669 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 915, + "major_roads": 2328, + "schools_waterpoints": 292, + "urban_landuse": 49132, + "water_surface": 54, + "waterways": 39 + }, + "label_counts": { + "vector_label": 2, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0264_exposure_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0264_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..064e95073f4c38fc233d1f9b650836f71c480add --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0264_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0264_exposure_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.38165451743698, + "lat": 23.805525616396018 + }, + "bbox": [ + 90.35708076035918, + 23.78304257624805, + 90.40622827451479, + 23.828008656543986 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0264_exposure_context_packet.png", + "sha256": "31c944699516be5e3bc0ee9fbf239c9a2407ca71d029d59290b1dbaa2bfc5aa6", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0264_exposure_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0264_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0264_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0264_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0264_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0264_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0264_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 51.2413, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 235913, + "min": 1.7569, + "max": 1136.9282, + "mean": 251.7534, + "median": 228.3958, + "p90": 512.8445 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 804, + "major_roads": 3105, + "schools_waterpoints": 411, + "urban_landuse": 67158, + "water_surface": 177, + "waterways": 24 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0265_exposure_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0265_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..0f8c303b20f30528f5fada45877de3b9a158611d --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0265_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0265_exposure_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.3731853009354, + "lat": 23.821550083828235 + }, + "bbox": [ + 90.34860851047259, + 23.799067043680267, + 90.39776209139822, + 23.844033123976203 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0265_exposure_context_packet.png", + "sha256": "444cc595553c7645630bcae28c932efe2527fa1eeffa69541ff5eb10f48cb8fe", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0265_exposure_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0265_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0265_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0265_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0265_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0265_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0265_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 53.7735, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 195631, + "min": 1.1337, + "max": 1150.6614, + "mean": 242.1383, + "median": 120.1209, + "p90": 639.7045 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 688, + "major_roads": 2791, + "schools_waterpoints": 420, + "urban_landuse": 64065, + "water_surface": 196, + "waterways": 34 + }, + "label_counts": { + "vector_label": 2, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0266_exposure_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0266_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..0cbfafe5cdc13f1ddb161617af66bba253ffc6d7 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0266_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0266_exposure_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.2681248412796, + "lat": 23.861145085456528 + }, + "bbox": [ + 90.24354054413784, + 23.83866204530856, + 90.29270913842136, + 23.883628125604496 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0266_exposure_context_packet.png", + "sha256": "8c6d17282969dd1621378edce82fcca92f479910689b5c2ba45fd9c4e71a8a7b", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0266_exposure_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0266_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0266_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0266_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0266_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0266_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0266_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 56.0929, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 250798, + "min": 15.3678, + "max": 129.0052, + "mean": 29.0637, + "median": 21.8117, + "p90": 53.2287 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 86, + "major_roads": 1024, + "schools_waterpoints": 25, + "urban_landuse": 38760, + "water_surface": 168, + "waterways": 11 + }, + "label_counts": { + "vector_label": 4, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0267_exposure_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0267_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..865bcb05fed201701fa57e4d31a56b124c598bab --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0267_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0267_exposure_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.4058035346616, + "lat": 23.768441342289634 + }, + "bbox": [ + 90.38123678729052, + 23.745958302141666, + 90.43037028203268, + 23.790924382437602 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0267_exposure_context_packet.png", + "sha256": "b64fc385402a6c33e5d26cdbf18ab49d4cae9a3713d4d1ba607d54eaf3780a90", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0267_exposure_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0267_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0267_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0267_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0267_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0267_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0267_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 47.2115, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 243492, + "min": 79.8583, + "max": 629.1728, + "mean": 284.0884, + "median": 272.4772, + "p90": 454.1145 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 504, + "major_roads": 2486, + "schools_waterpoints": 716, + "urban_landuse": 54935, + "water_surface": 71, + "waterways": 10 + }, + "label_counts": { + "vector_label": 4, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0268_exposure_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0268_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..a75a6f4a54cabd4db3de8c7bbb96514af8bdfe3d --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0268_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0268_exposure_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.3710877857672, + "lat": 23.98042351447749 + }, + "bbox": [ + 90.34648077622887, + 23.957940474329522, + 90.39569479530553, + 24.002906554625458 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0268_exposure_context_packet.png", + "sha256": "bd8513fa2ebb399460ddf5e38f8aea57f22ef566371e57db0ef80215403c8db3", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0268_exposure_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0268_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0268_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0268_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0268_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0268_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0268_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 54.4388, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 246912, + "min": 19.0569, + "max": 92.7566, + "mean": 37.9482, + "median": 36.89, + "p90": 52.3506 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 28, + "major_roads": 311, + "schools_waterpoints": 31, + "urban_landuse": 45653, + "water_surface": 289, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0271_exposure_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0271_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..662a2c0b829dea005e5415829aeceacc6749e5fb --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0271_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0271_exposure_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.42161740521868, + "lat": 23.744680319624234 + }, + "bbox": [ + 90.39705514167088, + 23.722197279476266, + 90.44617966876649, + 23.7671633597722 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0271_exposure_context_packet.png", + "sha256": "47dbb810b3d129f081713930ddf7f1a93c9239fcf64cfd9b25dffe80b887cdcc", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0271_exposure_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0271_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0271_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0271_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0271_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0271_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0271_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 48.5745, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 246031, + "min": 57.5504, + "max": 974.8149, + "mean": 322.748, + "median": 311.6011, + "p90": 506.7807 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 393, + "major_roads": 2828, + "schools_waterpoints": 333, + "urban_landuse": 51213, + "water_surface": 95, + "waterways": 168 + }, + "label_counts": { + "vector_label": 8, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0272_exposure_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0272_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..fbdbccaa9c7e4f0f70abe8b7609c50478cd8c124 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0272_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0272_exposure_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.42669041769423, + "lat": 23.73157085237389 + }, + "bbox": [ + 90.40213062545978, + 23.70908781222592, + 90.45125020992869, + 23.754053892521856 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0272_exposure_context_packet.png", + "sha256": "11bc1701beebe14cb4c16c4a153c359232076442d3fa05450b2aff7e6fb2516a", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0272_exposure_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0272_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0272_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0272_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0272_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0272_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0272_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 49.3437, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 247512, + "min": 66.7766, + "max": 1101.4894, + "mean": 325.5927, + "median": 301.9413, + "p90": 518.3067 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 379, + "major_roads": 2534, + "schools_waterpoints": 279, + "urban_landuse": 58239, + "water_surface": 84, + "waterways": 853 + }, + "label_counts": { + "vector_label": 6, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0274_exposure_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0274_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..72fed77201ffede866fc3bc4ef9cf84aa279c024 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0274_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0274_exposure_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.38524502845902, + "lat": 23.792813209413087 + }, + "bbox": [ + 90.36067367590324, + 23.77033016926512, + 90.4098163810148, + 23.815296249561055 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0274_exposure_context_packet.png", + "sha256": "65bb9ae58924922f133c4a4b8eb978920c2f8158894179204300e51d855801d9", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0274_exposure_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0274_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0274_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0274_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0274_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0274_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0274_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 49.7956, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 246603, + "min": 6.4818, + "max": 1082.0031, + "mean": 271.5112, + "median": 257.6891, + "p90": 474.4428 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 662, + "major_roads": 2749, + "schools_waterpoints": 440, + "urban_landuse": 53031, + "water_surface": 138, + "waterways": 27 + }, + "label_counts": { + "vector_label": 4, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0275_exposure_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0275_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..67a3a839c478d0d06bd94f7f8cff3dfa3e9fb4f9 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0275_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0275_exposure_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.39900462214602, + "lat": 23.77270883488403 + }, + "bbox": [ + 90.37443706885682, + 23.75022579473606, + 90.42357217543523, + 23.795191875031996 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0275_exposure_context_packet.png", + "sha256": "b0771b4cd1f88ea205abdc920b2002fae85c0b6da20524f8521009a7295eef18", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0275_exposure_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0275_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0275_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0275_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0275_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0275_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0275_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 48.8479, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 243800, + "min": 79.8689, + "max": 579.423, + "mean": 265.2425, + "median": 261.7074, + "p90": 404.3896 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 495, + "major_roads": 2264, + "schools_waterpoints": 704, + "urban_landuse": 45816, + "water_surface": 62, + "waterways": 13 + }, + "label_counts": { + "vector_label": 4, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0276_exposure_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0276_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..b578725b01504648cb8e405b67def1a7b690f6a3 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0276_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0276_exposure_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.27056728318453, + "lat": 23.849063311833362 + }, + "bbox": [ + 90.245985278315, + 23.826580271685394, + 90.29514928805406, + 23.87154635198133 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0276_exposure_context_packet.png", + "sha256": "89262e56ee8aa06fea95311fb53a1bd8f9160403938af9560998f7db77bf9d92", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0276_exposure_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0276_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0276_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0276_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0276_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0276_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0276_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 56.3259, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 245824, + "min": 11.218, + "max": 129.5065, + "mean": 31.9578, + "median": 23.4995, + "p90": 61.3534 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 94, + "major_roads": 993, + "schools_waterpoints": 30, + "urban_landuse": 42012, + "water_surface": 156, + "waterways": 8 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0277_exposure_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0277_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..7ecc4e4858f1ffc9fc187c3bf66b3386910d95b0 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0277_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0277_exposure_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.3692967888411, + "lat": 23.778756801536183 + }, + "bbox": [ + 90.34472809306632, + 23.756273761388215, + 90.39386548461587, + 23.80123984168415 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0277_exposure_context_packet.png", + "sha256": "33983c6cff629609b521cb4efb87fcecfe7580b14096d0e51e846b5a19ff1e39", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0277_exposure_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0277_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0277_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0277_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0277_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0277_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0277_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 50.3851, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 246511, + "min": 94.2178, + "max": 1132.515, + "mean": 321.4785, + "median": 307.2256, + "p90": 488.9438 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 956, + "major_roads": 3011, + "schools_waterpoints": 218, + "urban_landuse": 55553, + "water_surface": 79, + "waterways": 26 + }, + "label_counts": { + "vector_label": 2, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0278_exposure_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0278_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..d853ef0c0e361a0e8f2463d0204ce37cf1f3c291 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0278_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0278_exposure_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.37900498394977, + "lat": 23.814102399110617 + }, + "bbox": [ + 90.3544296036442, + 23.79161935896265, + 90.40358036425533, + 23.836585439258585 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0278_exposure_context_packet.png", + "sha256": "566cc94c1b57564b003f608b5778521f6cf7594172c1e5913105fcd8a94ef50c", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0278_exposure_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0278_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0278_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0278_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0278_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0278_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0278_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 52.3834, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 222715, + "min": 1.3545, + "max": 1147.4889, + "mean": 240.4249, + "median": 178.4848, + "p90": 533.3279 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 762, + "major_roads": 2952, + "schools_waterpoints": 431, + "urban_landuse": 67058, + "water_surface": 202, + "waterways": 26 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0279_exposure_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0279_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..f2b04e5d4fc87f65ed3cd4d3dffcacc2f1ce6789 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0279_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0279_exposure_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.38571535196924, + "lat": 23.746522804497033 + }, + "bbox": [ + 90.36115274094497, + 23.724039764349065, + 90.4102779629935, + 23.769005844645 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0279_exposure_context_packet.png", + "sha256": "f87c4d48511da165b32ad515789968a8b529cfd79d8b3d8d0bc3d36a0f258e5d", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0279_exposure_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0279_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0279_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0279_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0279_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0279_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0279_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 50.7643, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 254468, + "min": 57.5875, + "max": 851.9347, + "mean": 293.1045, + "median": 273.588, + "p90": 463.5628 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 549, + "major_roads": 2350, + "schools_waterpoints": 433, + "urban_landuse": 38540, + "water_surface": 85, + "waterways": 15 + }, + "label_counts": { + "vector_label": 8, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0280_exposure_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0280_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..ad17e0351680c27eb5099a4f225c90c3b9da0720 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0280_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0280_exposure_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.43442061812122, + "lat": 23.708920238470654 + }, + "bbox": [ + 90.40986509163575, + 23.686437198322686, + 90.4589761446067, + 23.73140327861862 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0280_exposure_context_packet.png", + "sha256": "e129bc836f5392708baed41eda7a19dcf5b1101b6b047793feac1c46df53892a", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0280_exposure_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0280_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0280_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0280_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0280_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0280_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0280_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 49.4804, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 246182, + "min": 0.0, + "max": 1097.2701, + "mean": 244.36, + "median": 205.909, + "p90": 402.7795 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 248, + "major_roads": 1868, + "schools_waterpoints": 181, + "urban_landuse": 61886, + "water_surface": 80, + "waterways": 28 + }, + "label_counts": { + "vector_label": 6, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0281_exposure_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0281_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..2ff6eb4afb8cba263399b0e5ff53d53b9d3f23e4 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0281_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0281_exposure_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.37942764748854, + "lat": 23.75927594791605 + }, + "bbox": [ + 90.35486263036745, + 23.73679290776808, + 90.40399266460963, + 23.781758988064016 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0281_exposure_context_packet.png", + "sha256": "9ce835c6d4abd49ce426fb148affaf0ec0f7d06bb294dd4a4a04be3fa5ef61b6", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0281_exposure_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0281_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0281_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0281_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0281_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0281_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0281_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 48.8715, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 251272, + "min": 72.3704, + "max": 553.3243, + "mean": 307.9861, + "median": 294.4111, + "p90": 444.34 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 830, + "major_roads": 2368, + "schools_waterpoints": 313, + "urban_landuse": 43205, + "water_surface": 63, + "waterways": 20 + }, + "label_counts": { + "vector_label": 3, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0282_exposure_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0282_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..4f473d5800ce9cc5699135104855c2133f291fc6 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0282_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0282_exposure_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.42995515702226, + "lat": 23.760158106307834 + }, + "bbox": [ + 90.4053899734046, + 23.737675066159866, + 90.45452034063993, + 23.782641146455802 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0282_exposure_context_packet.png", + "sha256": "c9f205026831c730bd496a0c20255b4194250d5d58cd7ed9f42f0e9ea050c899", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0282_exposure_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0282_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0282_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0282_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0282_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0282_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0282_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 49.2702, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 205625, + "min": 44.4441, + "max": 638.3123, + "mean": 329.5609, + "median": 316.2347, + "p90": 509.2921 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 370, + "major_roads": 2323, + "schools_waterpoints": 422, + "urban_landuse": 54219, + "water_surface": 84, + "waterways": 18 + }, + "label_counts": { + "vector_label": 3, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0285_exposure_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0285_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..1498701bc5ccbf131e75fa0201439347ce95597a --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0285_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0285_exposure_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.41197156539492, + "lat": 23.743607608168336 + }, + "bbox": [ + 90.38740950413484, + 23.721124568020368, + 90.436533626655, + 23.766090648316304 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0285_exposure_context_packet.png", + "sha256": "6fcc96b2a18ea2b7c35443bbc72299ecc194a4700861a87159c9c6d43be5e73b", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0285_exposure_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0285_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0285_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0285_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0285_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0285_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0285_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 47.8732, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 253860, + "min": 57.5475, + "max": 1046.3344, + "mean": 324.7136, + "median": 301.2172, + "p90": 524.3529 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 451, + "major_roads": 3019, + "schools_waterpoints": 377, + "urban_landuse": 46794, + "water_surface": 93, + "waterways": 356 + }, + "label_counts": { + "vector_label": 8, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0286_exposure_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0286_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..37116cbc704ec19d3e25a6bb2b065d83b6f7a389 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0286_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0286_exposure_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.42416843206013, + "lat": 23.814488350052084 + }, + "bbox": [ + 90.39959297869214, + 23.792005309904116, + 90.44874388542812, + 23.836971390200052 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0286_exposure_context_packet.png", + "sha256": "1b0a5779d8bc48ae6092e068cc5912fd4c815d097a1b15d0346fc8537243f966", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0286_exposure_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0286_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0286_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0286_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0286_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0286_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0286_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 53.6107, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 191314, + "min": 1.162, + "max": 566.9052, + "mean": 125.1216, + "median": 121.573, + "p90": 274.5585 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 49, + "major_roads": 1717, + "schools_waterpoints": 40, + "urban_landuse": 29542, + "water_surface": 100, + "waterways": 21 + }, + "label_counts": { + "vector_label": 3, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0289_exposure_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0289_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..47d96ea9fefae230647dda3569300d3e47fc0b39 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0289_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0289_exposure_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.4279561135383, + "lat": 23.721556392107477 + }, + "bbox": [ + 90.40339820796505, + 23.69907335195951, + 90.45251401911155, + 23.744039432255445 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0289_exposure_context_packet.png", + "sha256": "143a5136ecb451bb7eeeb1abd45386a4d6078c87ee32f50e2a5784190e34ad3d", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0289_exposure_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0289_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0289_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0289_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0289_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0289_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0289_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 49.5019, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 248199, + "min": 0.0, + "max": 1101.2745, + "mean": 280.5927, + "median": 255.0992, + "p90": 407.4276 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 333, + "major_roads": 2238, + "schools_waterpoints": 235, + "urban_landuse": 58547, + "water_surface": 79, + "waterways": 705 + }, + "label_counts": { + "vector_label": 7, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0290_exposure_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0290_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..548dbc151d77c373aaf52947c057757ed7f617fc --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0290_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0290_exposure_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.39462559022415, + "lat": 23.75416580547749 + }, + "bbox": [ + 90.37006153742084, + 23.731682765329523, + 90.41918964302747, + 23.77664884562546 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0290_exposure_context_packet.png", + "sha256": "b6ecc69ae0ca1714debdecfaeb7d29f3f53d2a64c67dd9254f27ab5c9722e897", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0290_exposure_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0290_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0290_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0290_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0290_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0290_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0290_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 48.7445, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 253453, + "min": 57.627, + "max": 581.2349, + "mean": 276.4129, + "median": 270.4028, + "p90": 408.4551 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 425, + "major_roads": 2531, + "schools_waterpoints": 459, + "urban_landuse": 35834, + "water_surface": 75, + "waterways": 9 + }, + "label_counts": { + "vector_label": 3, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0291_exposure_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0291_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..1d28ceadf0cd355c444634eaecfc317b281a436e --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0291_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0291_exposure_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.3842961748018, + "lat": 23.795928744465307 + }, + "bbox": [ + 90.35972423310528, + 23.77344570431734, + 90.40886811649833, + 23.818411784613275 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0291_exposure_context_packet.png", + "sha256": "a249c9c9db5d9ea3d278a1867e8a463be87ea3831f3f9114708cf9897302ae32", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0291_exposure_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0291_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0291_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0291_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0291_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0291_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0291_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 49.943, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 243765, + "min": 6.2504, + "max": 1084.6309, + "mean": 263.4381, + "median": 250.6307, + "p90": 484.9859 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 684, + "major_roads": 2829, + "schools_waterpoints": 471, + "urban_landuse": 56741, + "water_surface": 148, + "waterways": 27 + }, + "label_counts": { + "vector_label": 4, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0292_exposure_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0292_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..b5760ac9917f2424fca89da26b71442a33516174 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0292_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0292_exposure_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.36138344871684, + "lat": 23.773670923493572 + }, + "bbox": [ + 90.33681571371059, + 23.751187883345604, + 90.38595118372308, + 23.79615396364154 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0292_exposure_context_packet.png", + "sha256": "ec7b00e5bb3edd2c97bde21ff5b4e3b5fb24890cdb16530362858dd813be0a3c", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0292_exposure_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0292_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0292_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0292_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0292_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0292_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0292_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 50.9727, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 217970, + "min": 56.418, + "max": 611.8859, + "mean": 306.6074, + "median": 306.0008, + "p90": 466.1549 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 875, + "major_roads": 2853, + "schools_waterpoints": 210, + "urban_landuse": 54256, + "water_surface": 64, + "waterways": 34 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0293_exposure_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0293_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..350b2f23a30bc08e3699888748e5ecc11025599d --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0293_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0293_exposure_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.41059349631196, + "lat": 23.795872010432646 + }, + "bbox": [ + 90.38602156534462, + 23.773388970284678, + 90.4351654272793, + 23.818355050580614 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0293_exposure_context_packet.png", + "sha256": "f674b70bc4055413126608eee0de39b0ba0893e2379f9a5c5cd353daee9e3a41", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0293_exposure_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0293_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0293_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0293_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0293_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0293_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0293_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 48.7372, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 241885, + "min": 6.2431, + "max": 622.8665, + "mean": 194.4216, + "median": 162.2486, + "p90": 320.9458 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 368, + "major_roads": 1923, + "schools_waterpoints": 547, + "urban_landuse": 50706, + "water_surface": 148, + "waterways": 15 + }, + "label_counts": { + "vector_label": 7, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0294_exposure_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0294_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..ac0bc86d4a3451c374eca79160d482f71072c926 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0294_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0294_exposure_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.26504857637745, + "lat": 23.83616131236605 + }, + "bbox": [ + 90.24046901772286, + 23.81367827221808, + 90.28962813503205, + 23.858644352514016 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0294_exposure_context_packet.png", + "sha256": "d0b788991f7ad4e41c570a770af966129ab457cba107cf9a2a5e373d790b46e3", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0294_exposure_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0294_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0294_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0294_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0294_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0294_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0294_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 55.0617, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 238005, + "min": 13.5768, + "max": 129.3983, + "mean": 35.509, + "median": 28.2413, + "p90": 63.5832 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 80, + "major_roads": 909, + "schools_waterpoints": 27, + "urban_landuse": 47515, + "water_surface": 146, + "waterways": 9 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0297_exposure_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0297_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..70828f06932360362b37982e2024a6330bc7092f --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0297_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0297_exposure_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.38059700741795, + "lat": 23.815378102596714 + }, + "bbox": [ + 90.35602138560948, + 23.792895062448746, + 90.40517262922641, + 23.837861142744682 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0297_exposure_context_packet.png", + "sha256": "4d3f6758a8f41d2e6114e2b69097ae98c5f63bfc2393df7ce3bbd6b8e367d7df", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0297_exposure_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0297_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0297_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0297_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0297_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0297_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0297_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 52.6248, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 221476, + "min": 1.1522, + "max": 1137.9518, + "mean": 212.7149, + "median": 141.9443, + "p90": 513.8361 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 704, + "major_roads": 2818, + "schools_waterpoints": 424, + "urban_landuse": 63018, + "water_surface": 210, + "waterways": 24 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0298_exposure_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0298_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..cb25bce29c81df70d3edd82c4b9be1a852ab78af --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0298_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0298_exposure_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.43221263732457, + "lat": 23.745429196725162 + }, + "bbox": [ + 90.40765023254936, + 23.722946156577194, + 90.45677504209978, + 23.76791223687313 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0298_exposure_context_packet.png", + "sha256": "987221fd8eaf11ff708e37e85d38ae6fa97bfe93d7a9ef76b0e12c46d169beec", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0298_exposure_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0298_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0298_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0298_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0298_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0298_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0298_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 49.713, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 228616, + "min": 60.9556, + "max": 869.4329, + "mean": 322.366, + "median": 313.0233, + "p90": 500.1224 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 332, + "major_roads": 2415, + "schools_waterpoints": 223, + "urban_landuse": 51476, + "water_surface": 95, + "waterways": 22 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0300_exposure_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0300_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..986eb44e63860977e629faefce3836b7164ffdfc --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0300_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0300_exposure_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.41570176351296, + "lat": 23.783358734659426 + }, + "bbox": [ + 90.39113219815962, + 23.76087569451146, + 90.44027132886629, + 23.805841774807394 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0300_exposure_context_packet.png", + "sha256": "23828d48d0b8adec5b9961551ec8efe072de4e58380336466b67f241245dd318", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0300_exposure_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0300_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0300_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0300_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0300_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0300_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0300_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 48.7583, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 223761, + "min": 8.5961, + "max": 638.0731, + "mean": 256.0779, + "median": 231.7044, + "p90": 454.2259 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 283, + "major_roads": 2133, + "schools_waterpoints": 557, + "urban_landuse": 53960, + "water_surface": 131, + "waterways": 16 + }, + "label_counts": { + "vector_label": 7, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0301_exposure_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0301_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..1428139a4872413a23d40fb67ccdb814eb9dd207 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0301_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0301_exposure_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.4010730973521, + "lat": 23.75778130184146 + }, + "bbox": [ + 90.37650836230868, + 23.735298261693494, + 90.42563783239551, + 23.78026434198943 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0301_exposure_context_packet.png", + "sha256": "3bc9a11b14c24bdb1a19d59b9d54c934ba84cb5fc08614304bd02ee91e0b9dbb", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0301_exposure_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0301_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0301_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0301_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0301_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0301_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0301_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 46.9931, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 249034, + "min": 58.3195, + "max": 587.2903, + "mean": 288.2939, + "median": 276.8031, + "p90": 441.7749 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 380, + "major_roads": 2552, + "schools_waterpoints": 521, + "urban_landuse": 41035, + "water_surface": 71, + "waterways": 11 + }, + "label_counts": { + "vector_label": 5, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0303_exposure_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0303_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..5cc7d4b4e5b115735a85c435a488f5c64ef4a509 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0303_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0303_exposure_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.38887138324866, + "lat": 23.81551314665577 + }, + "bbox": [ + 90.36429573587407, + 23.793030106507803, + 90.41344703062325, + 23.83799618680374 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0303_exposure_context_packet.png", + "sha256": "f4c4aa76216756a0879a334e5f0f0e068ecfd66c28ae806818a115980a4ba2de", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0303_exposure_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0303_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0303_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0303_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0303_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0303_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0303_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 52.9669, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 222162, + "min": 1.1245, + "max": 612.5285, + "mean": 150.6047, + "median": 96.1151, + "p90": 388.9719 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 588, + "major_roads": 2362, + "schools_waterpoints": 338, + "urban_landuse": 51837, + "water_surface": 224, + "waterways": 22 + }, + "label_counts": { + "vector_label": 2, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0304_exposure_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0304_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..5ffb9e468db4cc3b0b60cffac6ab0b10f24a7f65 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0304_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0304_exposure_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.40942041883245, + "lat": 23.749711576293212 + }, + "bbox": [ + 90.38485720635059, + 23.727228536145244, + 90.43398363131432, + 23.77219461644118 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0304_exposure_context_packet.png", + "sha256": "963752457de34afcfd3af8522bdfc6688f10b324e790ec7b442150ce936f8e34", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0304_exposure_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0304_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0304_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0304_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0304_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0304_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0304_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 46.525, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 248813, + "min": 57.6783, + "max": 656.4277, + "mean": 310.8123, + "median": 298.4947, + "p90": 489.7466 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 458, + "major_roads": 2888, + "schools_waterpoints": 359, + "urban_landuse": 45588, + "water_surface": 85, + "waterways": 4 + }, + "label_counts": { + "vector_label": 3, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0307_exposure_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0307_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..c5d5b751e41c8d0b93c0b6dda4640f936fd89f04 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0307_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0307_exposure_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.40708023421081, + "lat": 23.782761992505645 + }, + "bbox": [ + 90.38251078162995, + 23.760278952357677, + 90.43164968679167, + 23.805245032653612 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0307_exposure_context_packet.png", + "sha256": "9e3274f3feed3f8b1495407b55473d4de47bce5067a606617676049899d52be7", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0307_exposure_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0307_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0307_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0307_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0307_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0307_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0307_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 47.8961, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 242175, + "min": 10.2457, + "max": 637.0828, + "mean": 242.5408, + "median": 232.3879, + "p90": 413.8006 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 377, + "major_roads": 2164, + "schools_waterpoints": 566, + "urban_landuse": 49653, + "water_surface": 88, + "waterways": 13 + }, + "label_counts": { + "vector_label": 7, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0308_exposure_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0308_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..477869837e9dd7b4a4d26c0617e2593ecf58d691 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0308_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0308_exposure_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.37616339704533, + "lat": 23.7980926171295 + }, + "bbox": [ + 90.35159104610594, + 23.775609576981534, + 90.40073574798473, + 23.82057565727747 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0308_exposure_context_packet.png", + "sha256": "ccb7f269e9e261d443c127ede39dc36c4f400f26a92f980142ae4666affeeebc", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0308_exposure_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0308_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0308_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0308_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0308_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0308_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0308_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 51.2037, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 242232, + "min": 9.806, + "max": 1148.7037, + "mean": 317.6404, + "median": 272.8534, + "p90": 538.8045 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 759, + "major_roads": 3225, + "schools_waterpoints": 315, + "urban_landuse": 64901, + "water_surface": 153, + "waterways": 32 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0310_exposure_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0310_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..97596c99bb88e6287a4efca8bb21ede8adfe8060 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0310_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0310_exposure_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.37486854851754, + "lat": 23.781007210883335 + }, + "bbox": [ + 90.35029942753424, + 23.758524170735367, + 90.39943766950084, + 23.803490251031302 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0310_exposure_context_packet.png", + "sha256": "af8da8462545329ec892ed3f3a35ff3794f034745de79b8e9f56e369af660c27", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0310_exposure_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0310_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0310_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0310_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0310_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0310_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0310_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 49.753, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 255882, + "min": 112.9425, + "max": 1145.4824, + "mean": 330.9753, + "median": 311.6865, + "p90": 495.385 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 860, + "major_roads": 2898, + "schools_waterpoints": 198, + "urban_landuse": 50998, + "water_surface": 93, + "waterways": 14 + }, + "label_counts": { + "vector_label": 2, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0311_exposure_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0311_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..0b4164a4f9ce89761d41a14799158696b9a0464b --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0311_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0311_exposure_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.42934236327591, + "lat": 23.724709133774027 + }, + "bbox": [ + 90.40478386385817, + 23.70222609362606, + 90.45390086269364, + 23.747192173921995 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0311_exposure_context_packet.png", + "sha256": "15f58e57d8eae72ca9382c1a5702d87a806324f73160027f62b5db5648a858f8", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0311_exposure_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0311_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0311_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0311_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0311_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0311_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0311_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 49.8316, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 244997, + "min": 0.0, + "max": 1100.5651, + "mean": 293.7879, + "median": 275.483, + "p90": 425.9084 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 313, + "major_roads": 2225, + "schools_waterpoints": 229, + "urban_landuse": 57058, + "water_surface": 82, + "waterways": 471 + }, + "label_counts": { + "vector_label": 6, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0312_exposure_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0312_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..e09dd66fce6fdb5288406b8268b4a58e294da939 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0312_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0312_exposure_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.39672862488304, + "lat": 23.90841755445609 + }, + "bbox": [ + 90.3721353441231, + 23.885934514308122, + 90.42132190564298, + 23.930900594604058 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0312_exposure_context_packet.png", + "sha256": "7cde20ac18a492343ff003a772aa9cf9fdeaba0e4132f0f1c2cefd7a3e352de6", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0312_exposure_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0312_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0312_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0312_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0312_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0312_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0312_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 52.4791, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 225869, + "min": 25.4527, + "max": 195.6012, + "mean": 92.5035, + "median": 87.3131, + "p90": 148.6612 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 36, + "major_roads": 801, + "schools_waterpoints": 162, + "urban_landuse": 54449, + "water_surface": 184, + "waterways": 9 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0313_random_ecological_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0313_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..190a9c82ba73c1f9adc58efc79126bda24238316 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0313_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0313_random_ecological", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.46021665283922, + "lat": 23.931765439356155 + }, + "bbox": [ + 90.4356189264665, + 23.909282399208188, + 90.48481437921194, + 23.954248479504123 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0313_random_ecological_packet.png", + "sha256": "1678b676a562184d4ae2cfa7ca98a79f52ea7b1704d0666024d9576ee66123b3", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0313_random_ecological", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0313_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0313_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0313_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0313_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0313_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0313_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 53.2767, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 213060, + "min": 2.514, + "max": 28.4435, + "mean": 15.0217, + "median": 15.1455, + "p90": 20.5596 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 128, + "schools_waterpoints": 0, + "urban_landuse": 2628, + "water_surface": 12, + "waterways": 1 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0314_random_ecological_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0314_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..da2f64939d11da666e5046862588312b269d0cc6 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0314_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0314_random_ecological", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.14921940180561, + "lat": 23.87528279299635 + }, + "bbox": [ + 90.12463242038858, + 23.852799752848384, + 90.17380638322264, + 23.89776583314432 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0314_random_ecological_packet.png", + "sha256": "20814bf491f14b0c2315390adece8acaf403d66dd268fc36c326c1b5d335877c", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0314_random_ecological", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0314_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0314_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0314_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0314_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0314_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0314_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 54.6077, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 256373, + "min": 4.037, + "max": 9.1393, + "mean": 5.5321, + "median": 5.2663, + "p90": 6.9428 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 221, + "schools_waterpoints": 0, + "urban_landuse": 37, + "water_surface": 87, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0317_random_ecological_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0317_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..011e77ff20c194d2c2988982dc240d1163a41c40 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0317_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0317_random_ecological", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.30884582879916, + "lat": 23.780063317064133 + }, + "bbox": [ + 90.28427688616836, + 23.757580276916165, + 90.33341477142997, + 23.8025463572121 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0317_random_ecological_packet.png", + "sha256": "88f31e5f2450cbfcabd78ddff94c0717d553ef3c8c383515b28375d34cb57ac9", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0317_random_ecological", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0317_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0317_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0317_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0317_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0317_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0317_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 54.8525, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 146580, + "min": 10.0135, + "max": 175.9201, + "mean": 33.5254, + "median": 18.2652, + "p90": 101.2359 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 4, + "major_roads": 331, + "schools_waterpoints": 8, + "urban_landuse": 13971, + "water_surface": 80, + "waterways": 3 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0318_random_ecological_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0318_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..bcae24289542b7dd73bb9cccec4a4856374c630f --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0318_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0318_random_ecological", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.49691068886523, + "lat": 23.936445471045648 + }, + "bbox": [ + 90.47231207069443, + 23.91396243089768, + 90.52150930703603, + 23.958928511193616 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0318_random_ecological_packet.png", + "sha256": "a6843a3c63868095483585fc1d5a4feb808535536541da29c630db2fef936584", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0318_random_ecological", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0318_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0318_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0318_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0318_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0318_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0318_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 49.3028, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 113453, + "min": 2.4097, + "max": 13.4903, + "mean": 7.327, + "median": 5.9785, + "p90": 11.0352 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 46, + "schools_waterpoints": 0, + "urban_landuse": 12, + "water_surface": 2, + "waterways": 4 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0319_random_ecological_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0319_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..b00e1ee0dffa1dc451a2f213be5d28582760a82b --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0319_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0319_random_ecological", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.44091130955326, + "lat": 23.90235079488425 + }, + "bbox": [ + 90.41631918301857, + 23.87986775473628, + 90.46550343608794, + 23.924833835032217 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0319_random_ecological_packet.png", + "sha256": "b5dd59bae284920daf1d966b16fd0fe27cabd7ccbd12d5ecdca22c9ea00c1d2e", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0319_random_ecological", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0319_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0319_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0319_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0319_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0319_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0319_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 52.1399, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 178903, + "min": 7.453, + "max": 171.775, + "mean": 35.1614, + "median": 25.1436, + "p90": 69.4687 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 303, + "schools_waterpoints": 3, + "urban_landuse": 15405, + "water_surface": 87, + "waterways": 4 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0320_random_ecological_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0320_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..d67a5683b20d2502061e41669176dec455529954 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0320_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0320_random_ecological", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.06479916546105, + "lat": 23.796427951975627 + }, + "bbox": [ + 90.04022712935613, + 23.77394491182766, + 90.08937120156598, + 23.818910992123595 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0320_random_ecological_packet.png", + "sha256": "c98280cbef832f6968d2e5ac0daf2ecd4bbfa7d7356c8b62ea436fe6e4cf719a", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0320_random_ecological", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0320_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0320_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0320_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0320_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0320_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0320_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 53.6507, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 257664, + "min": 6.7523, + "max": 10.803, + "mean": 8.0284, + "median": 7.8713, + "p90": 8.935 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 2, + "major_roads": 133, + "schools_waterpoints": 3, + "urban_landuse": 81, + "water_surface": 9, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0323_random_ecological_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0323_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..6fa1bb6df296140796757e52c7351ed155f2610b --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0323_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0323_random_ecological", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.35439910681367, + "lat": 23.613416724707676 + }, + "bbox": [ + 90.32986150789864, + 23.590933684559708, + 90.3789367057287, + 23.635899764855644 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0323_random_ecological_packet.png", + "sha256": "d7b433507fbb45bb5783d038c172744fac0e635c470fccaec0ab81628e966a47", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0323_random_ecological", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0323_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0323_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0323_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0323_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0323_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0323_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 54.1146, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 245261, + "min": 5.6017, + "max": 17.2987, + "mean": 11.8022, + "median": 11.5982, + "p90": 14.4252 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 5, + "major_roads": 82, + "schools_waterpoints": 2, + "urban_landuse": 60, + "water_surface": 0, + "waterways": 2 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0325_random_ecological_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0325_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..41aef021e67915a0ae46cca3a7f1bfd2df4cb341 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0325_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0325_random_ecological", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.4794758507663, + "lat": 23.88372222310398 + }, + "bbox": [ + 90.45488726599223, + 23.861239182956012, + 90.50406443554039, + 23.906205263251948 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0325_random_ecological_packet.png", + "sha256": "6a4407c9edf400dc4b4c56de17f00b891ad12b86c720bb58cf1020b91a7510cf", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0325_random_ecological", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0325_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0325_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0325_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0325_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0325_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0325_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 54.0505, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 194901, + "min": 4.5482, + "max": 26.8414, + "mean": 8.5101, + "median": 6.8702, + "p90": 14.4023 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 427, + "schools_waterpoints": 0, + "urban_landuse": 1970, + "water_surface": 29, + "waterways": 5 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0326_random_ecological_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0326_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..43c69f538082b1cb0b2152a74aa7ec410713d7c3 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0326_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0326_random_ecological", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.32870982158717, + "lat": 23.81789176470375 + }, + "bbox": [ + 90.30413372386882, + 23.79540872455578, + 90.35328591930552, + 23.840374804851717 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0326_random_ecological_packet.png", + "sha256": "2689487acaa7b38afe50297c692cc605e2ba28074a8e83683035dabf0313a70b", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0326_random_ecological", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0326_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0326_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0326_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0326_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0326_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0326_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 47.679, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 111251, + "min": 6.9076, + "max": 1044.3151, + "mean": 180.6034, + "median": 35.1569, + "p90": 558.928 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 17, + "major_roads": 523, + "schools_waterpoints": 15, + "urban_landuse": 15412, + "water_surface": 90, + "waterways": 19 + }, + "label_counts": { + "vector_label": 2, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0327_random_ecological_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0327_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..3b5da88845281a4f0ab3cf6de9bc21b9fcdc6d4f --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0327_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0327_random_ecological", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.16470757838667, + "lat": 24.03972780069274 + }, + "bbox": [ + 90.14008922106336, + 24.017244760544774, + 90.18932593570997, + 24.06221084084071 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0327_random_ecological_packet.png", + "sha256": "6a52a215b9d1008ec3995c596843e48c643ce131dd7484638f03b96428dc7376", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0327_random_ecological", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0327_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0327_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0327_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0327_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0327_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0327_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 47.1586, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 119916, + "min": 3.11, + "max": 12.1493, + "mean": 6.0978, + "median": 5.5774, + "p90": 8.905 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 35, + "schools_waterpoints": 0, + "urban_landuse": 537, + "water_surface": 13, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0329_random_ecological_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0329_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..22038d222d53f79bf0a6ca012ae1a394407c4898 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0329_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0329_random_ecological", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.06682980751314, + "lat": 23.740425497296627 + }, + "bbox": [ + 90.04226834625281, + 23.71794245714866, + 90.09139126877348, + 23.762908537444595 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0329_random_ecological_packet.png", + "sha256": "8d9de5c9a8d7899d8188bfdbb1a09cd755771067ed784a2f6dad2df431da4872", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0329_random_ecological", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0329_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0329_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0329_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0329_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0329_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0329_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 55.285, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 248787, + "min": 4.0305, + "max": 8.9354, + "mean": 6.7744, + "median": 7.0003, + "p90": 7.9674 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 46, + "schools_waterpoints": 1, + "urban_landuse": 35, + "water_surface": 34, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0330_random_ecological_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0330_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..9cf760bb2675d2ed787ce81856e1878c1b96108c --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0330_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0330_random_ecological", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.32118551668914, + "lat": 23.675097289562114 + }, + "bbox": [ + 90.29663635012017, + 23.652614249414146, + 90.34573468325812, + 23.69758032971008 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0330_random_ecological_packet.png", + "sha256": "05a1d5805362ba011f98a74f67b8fc94e420879244d665ec5fa44b9c64447c6f", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0330_random_ecological", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0330_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0330_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0330_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0330_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0330_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0330_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 55.6048, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 244434, + "min": 6.5208, + "max": 21.263, + "mean": 10.5753, + "median": 10.2472, + "p90": 13.6139 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 159, + "schools_waterpoints": 0, + "urban_landuse": 13959, + "water_surface": 229, + "waterways": 18 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0333_random_ecological_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0333_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..61d2b32a90dfcf6c7ca4a159d9c82db797bb3e53 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0333_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0333_random_ecological", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.40580000859492, + "lat": 23.830036849873554 + }, + "bbox": [ + 90.38122161052986, + 23.807553809725587, + 90.43037840665998, + 23.852519890021522 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0333_random_ecological_packet.png", + "sha256": "df1ca0f0568978276c7ae610f9a1e0dc2b535f1c88db191832895b79bbfe077b", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0333_random_ecological", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0333_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0333_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0333_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0333_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0333_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0333_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 54.4981, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 214985, + "min": 0.9255, + "max": 424.7695, + "mean": 60.0632, + "median": 10.5674, + "p90": 181.8768 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 103, + "major_roads": 1268, + "schools_waterpoints": 42, + "urban_landuse": 30218, + "water_surface": 219, + "waterways": 10 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0334_random_ecological_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0334_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..c5f9ad67ed09136de3f9a1905b9875f1f119605d --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0334_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0334_random_ecological", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.45279077616289, + "lat": 24.029257421354124 + }, + "bbox": [ + 90.42817442500872, + 24.006774381206156, + 90.47740712731705, + 24.051740461502092 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0334_random_ecological_packet.png", + "sha256": "8a5ffbac64dcc2932b904bba4fd0eed7193203a13fedb9a294388441a015bc1b", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0334_random_ecological", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0334_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0334_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0334_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0334_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0334_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0334_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 52.0621, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 189954, + "min": 3.8135, + "max": 54.948, + "mean": 11.3746, + "median": 7.73, + "p90": 20.6625 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 47, + "schools_waterpoints": 0, + "urban_landuse": 1377, + "water_surface": 0, + "waterways": 2 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0335_random_ecological_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0335_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..9794b9220bc9c858e97746de81cc32a3b38fb2d7 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0335_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0335_random_ecological", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.10756332381357, + "lat": 23.964813297757672 + }, + "bbox": [ + 90.0829592951461, + 23.942330257609704, + 90.13216735248103, + 23.98729633790564 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0335_random_ecological_packet.png", + "sha256": "8ea51590b5ffb5b7f3c7d1dab959406b08a108637c4b309d876f6b9b4b526d25", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0335_random_ecological", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0335_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0335_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0335_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0335_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0335_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0335_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 55.4476, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 257876, + "min": 3.8835, + "max": 8.8712, + "mean": 5.0321, + "median": 4.8903, + "p90": 6.0296 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 45, + "schools_waterpoints": 0, + "urban_landuse": 5, + "water_surface": 0, + "waterways": 1 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0336_random_ecological_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0336_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..c4412971773ec8b4d5e439804806720001f2718d --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0336_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0336_random_ecological", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.50407224331731, + "lat": 23.754562971445644 + }, + "bbox": [ + 90.47950811557585, + 23.732079931297676, + 90.52863637105877, + 23.77704601159361 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0336_random_ecological_packet.png", + "sha256": "d4a40f1ee2d6c9b868099b593026f0c83ab463e741235f0faeaed659fc13c96e", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0336_random_ecological", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0336_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0336_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0336_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0336_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0336_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0336_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 58.721, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 123969, + "min": 4.8734, + "max": 107.73, + "mean": 28.1516, + "median": 19.9925, + "p90": 56.0482 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 55, + "schools_waterpoints": 1, + "urban_landuse": 4109, + "water_surface": 62, + "waterways": 6 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0338_random_ecological_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0338_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..1b1bb4cabe91794084f50d06a0b097e6b6516657 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0338_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0338_random_ecological", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.48261974788666, + "lat": 23.58678316821153 + }, + "bbox": [ + 90.4580871317083, + 23.56430012806356, + 90.50715236406502, + 23.609266208359497 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0338_random_ecological_packet.png", + "sha256": "5b575bca1905a370b3b46311a25df9bb7abd21c36fc345a52520acaea05e037f", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0338_random_ecological", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0338_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0338_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0338_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0338_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0338_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0338_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 51.8813, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 249321, + "min": 0.0, + "max": 152.6799, + "mean": 47.1952, + "median": 33.8867, + "p90": 109.9601 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 2, + "major_roads": 232, + "schools_waterpoints": 4, + "urban_landuse": 23497, + "water_surface": 22, + "waterways": 10 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0339_random_ecological_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0339_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..89c03365c6f5f5962707a56f7607ee02b677c606 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0339_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0339_random_ecological", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.10965341860177, + "lat": 23.829062169383107 + }, + "bbox": [ + 90.08507520520325, + 23.80657912923514, + 90.13423163200028, + 23.851545209531075 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0339_random_ecological_packet.png", + "sha256": "d2d34cc5d48ff791fcf369ff6408592b6e421e2f4d4d636ee1310a548429ebbb", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0339_random_ecological", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0339_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0339_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0339_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0339_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0339_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0339_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 54.628, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 258192, + "min": 6.3511, + "max": 11.3936, + "mean": 8.1596, + "median": 7.9218, + "p90": 9.6113 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 2, + "major_roads": 203, + "schools_waterpoints": 2, + "urban_landuse": 273, + "water_surface": 16, + "waterways": 1 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0341_random_ecological_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0341_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..76f9d81adfc3394418618a8a4aac654b56b4312f --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0341_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0341_random_ecological", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.46377826210211, + "lat": 23.607022913350765 + }, + "bbox": [ + 90.439241860041, + 23.584539873202797, + 90.48831466416323, + 23.629505953498732 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0341_random_ecological_packet.png", + "sha256": "6710acc810c339936d64432990d3eebb6970f09565c7773aea8e9b48ab2d3fbf", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0341_random_ecological", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0341_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0341_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0341_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0341_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0341_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0341_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 54.2426, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 247694, + "min": 0.0, + "max": 163.8707, + "mean": 45.5642, + "median": 32.3343, + "p90": 101.786 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 196, + "schools_waterpoints": 1, + "urban_landuse": 28681, + "water_surface": 45, + "waterways": 24 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0342_random_ecological_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0342_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..d279760ecb4f9e8f196fc383c76e716c69742f78 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0342_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0342_random_ecological", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.03206049380734, + "lat": 24.016313052064955 + }, + "bbox": [ + 90.00744662126121, + 23.993830011916987, + 90.05667436635346, + 24.038796092212923 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0342_random_ecological_packet.png", + "sha256": "8588dcb8d8dbd9be76cf157968bd5f522827d8f5f56fd2c6771f5fbf6c3f8720", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0342_random_ecological", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0342_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0342_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0342_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0342_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0342_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0342_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 56.1364, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 238166, + "min": 4.0727, + "max": 11.2129, + "mean": 6.7142, + "median": 6.262, + "p90": 9.9426 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 38, + "schools_waterpoints": 0, + "urban_landuse": 1828, + "water_surface": 18, + "waterways": 2 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0343_random_ecological_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0343_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..7d7bb1b6fea8d1c202d80763fb139a06374f0b81 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0343_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0343_random_ecological", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.42985114548124, + "lat": 23.758581567284633 + }, + "bbox": [ + 90.4052862594103, + 23.736098527136665, + 90.45441603155217, + 23.7810646074326 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0343_random_ecological_packet.png", + "sha256": "b2350dab8da78761bea5c4a129d3218ab55f2654733e07176f9794897c3e0124", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0343_random_ecological", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0343_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0343_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0343_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0343_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0343_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0343_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 49.2256, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 209745, + "min": 45.0822, + "max": 638.0095, + "mean": 329.1328, + "median": 314.6176, + "p90": 508.0789 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 369, + "major_roads": 2352, + "schools_waterpoints": 419, + "urban_landuse": 53782, + "water_surface": 85, + "waterways": 16 + }, + "label_counts": { + "vector_label": 3, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0344_random_ecological_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0344_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..37e7109d182ef22daeffb10c6802aca0429c54ea --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0344_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0344_random_ecological", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.09810885278155, + "lat": 23.554356253438446 + }, + "bbox": [ + 90.0735822933061, + 23.531873213290478, + 90.122635412257, + 23.576839293586414 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0344_random_ecological_packet.png", + "sha256": "b44eb620e4644ff968af85e828f77618bff484b2d641fb0f43426d03f4d5aa93", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0344_random_ecological", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0344_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0344_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0344_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0344_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0344_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0344_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 52.0963, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 260320, + "min": 0.0, + "max": 7.7123, + "mean": 0.8312, + "median": 0.0, + "p90": 4.3034 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 0, + "schools_waterpoints": 0, + "urban_landuse": 269, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0345_random_ecological_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0345_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..e2f83a6ef01406d12304201b0b72b6b2933c2a0e --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0345_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0345_random_ecological", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.18247538634112, + "lat": 23.56872206428712 + }, + "bbox": [ + 90.15794614495621, + 23.54623902413915, + 90.20700462772604, + 23.591205104435087 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0345_random_ecological_packet.png", + "sha256": "be790537892794b3558dfe90958e39c8e00e8c693bcd20b2709ddb9fd8bbb2b3", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0345_random_ecological", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0345_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0345_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0345_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0345_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0345_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0345_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 53.62, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 225003, + "min": 1.8443, + "max": 16.3661, + "mean": 10.1039, + "median": 10.674, + "p90": 13.2858 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 18, + "schools_waterpoints": 0, + "urban_landuse": 4558, + "water_surface": 6, + "waterways": 4 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0347_random_ecological_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0347_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..0959aa29042224f74a885ec2a19f59aea2744939 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0347_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0347_random_ecological", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.44898926200197, + "lat": 23.78349876772071 + }, + "bbox": [ + 90.42441967018463, + 23.761015727572744, + 90.47355885381931, + 23.80598180786868 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0347_random_ecological_packet.png", + "sha256": "04a34d062e082244e0ec25634109b7897f0a073af6335c410c7b91fd7b0d8770", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0347_random_ecological", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0347_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0347_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0347_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0347_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0347_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0347_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 53.0567, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 113614, + "min": 7.1399, + "max": 637.9691, + "mean": 264.8265, + "median": 272.2187, + "p90": 482.5616 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 80, + "major_roads": 1112, + "schools_waterpoints": 24, + "urban_landuse": 27926, + "water_surface": 128, + "waterways": 26 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0348_random_ecological_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0348_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..d93e76fb9042df4a2b739f66a328f12b69c6d6c9 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0348_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0348_random_ecological", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.17051479355408, + "lat": 23.617714925617417 + }, + "bbox": [ + 90.14597638982387, + 23.59523188546945, + 90.19505319728428, + 23.640197965765385 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0348_random_ecological_packet.png", + "sha256": "84e50e5852d802ff1eab5b5f3965420a73b6b26331d5b4f66e7137fc169dd3d5", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0348_random_ecological", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0348_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0348_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0348_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0348_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0348_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0348_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 52.2376, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 199120, + "min": 2.4951, + "max": 19.2696, + "mean": 10.5225, + "median": 9.27, + "p90": 16.5631 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 40, + "schools_waterpoints": 1, + "urban_landuse": 2648, + "water_surface": 14, + "waterways": 3 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0349_random_ecological_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0349_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..880f3a3660d01159c0ad3cb5e4f533bfc1a1f5d3 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0349_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0349_random_ecological", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.11433700540569, + "lat": 23.70192977442839 + }, + "bbox": [ + 90.08978279434756, + 23.679446734280422, + 90.13889121646382, + 23.724412814576358 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0349_random_ecological_packet.png", + "sha256": "1e43e4fdd604b5cde3d65e2aa2a582e2df632c24985a1884029a63ae49fe3069", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0349_random_ecological", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0349_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0349_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0349_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0349_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0349_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0349_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 56.3574, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 252361, + "min": 3.5871, + "max": 7.6495, + "mean": 5.0857, + "median": 5.1069, + "p90": 5.849 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 7, + "schools_waterpoints": 0, + "urban_landuse": 1, + "water_surface": 0, + "waterways": 3 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0350_random_ecological_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0350_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..6271b48ab0610773e986ef89548f439f7d249d4c --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0350_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0350_random_ecological", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.42701840112987, + "lat": 23.733632819891383 + }, + "bbox": [ + 90.40245822030458, + 23.711149779743415, + 90.45157858195516, + 23.75611586003935 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0350_random_ecological_packet.png", + "sha256": "846dc9111fb03fefb1d7064ad38375db913394622333c83c057bb0d6d4771c7d", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0350_random_ecological", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0350_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0350_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0350_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0350_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0350_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0350_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 49.5289, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 245466, + "min": 67.3423, + "max": 1104.5775, + "mean": 328.4473, + "median": 302.6965, + "p90": 519.9072 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 376, + "major_roads": 2495, + "schools_waterpoints": 292, + "urban_landuse": 58546, + "water_surface": 90, + "waterways": 753 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0351_random_ecological_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0351_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..33c596756cbf2252360fdc209621602367b824d1 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0351_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0351_random_ecological", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.42589842186649, + "lat": 24.032771918457076 + }, + "bbox": [ + 90.40128139744787, + 24.010288878309108, + 90.45051544628511, + 24.055254958605044 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0351_random_ecological_packet.png", + "sha256": "cb8b36b9e513d845aaab29a33c232dc7d619aca49527ca68218801e4ad39000b", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0351_random_ecological", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0351_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0351_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0351_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0351_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0351_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0351_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 53.8844, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 185293, + "min": 6.3801, + "max": 60.2449, + "mean": 23.9843, + "median": 20.8409, + "p90": 41.6109 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 227, + "schools_waterpoints": 10, + "urban_landuse": 10106, + "water_surface": 5, + "waterways": 3 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0352_random_ecological_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0352_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..79a49ab7c802555064ce665317c2892884595af1 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0352_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0352_random_ecological", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.46900692899632, + "lat": 23.827625893705562 + }, + "bbox": [ + 90.44442898770188, + 23.805142853557594, + 90.49358487029076, + 23.85010893385353 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0352_random_ecological_packet.png", + "sha256": "725def55f86f01102d01f9a185225a4c34c7bf2edae3ec074b65d1bf130785d8", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0352_random_ecological", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0352_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0352_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0352_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0352_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0352_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0352_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 58.5721, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 77297, + "min": 4.0458, + "max": 108.6424, + "mean": 23.9469, + "median": 19.5278, + "p90": 60.3938 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 1142, + "schools_waterpoints": 1, + "urban_landuse": 4818, + "water_surface": 26, + "waterways": 68 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0354_random_ecological_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0354_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..edb74b70147f72ec09765783fda58e31d719545b --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0354_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0354_random_ecological", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.32396246850865, + "lat": 23.773837468800593 + }, + "bbox": [ + 90.29939470204474, + 23.751354428652625, + 90.34853023497257, + 23.79632050894856 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0354_random_ecological_packet.png", + "sha256": "3ca0468968d018584b38f18596163c3d2c7093727998ac84a4dda4a5bcc91e84", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0354_random_ecological", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0354_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0354_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0354_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0354_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0354_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0354_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 56.7748, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 137210, + "min": 10.0916, + "max": 347.0451, + "mean": 71.2168, + "median": 29.1315, + "p90": 158.8033 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 60, + "major_roads": 743, + "schools_waterpoints": 18, + "urban_landuse": 24763, + "water_surface": 68, + "waterways": 6 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0356_random_ecological_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0356_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..919181333820e3c898c0cf4709dfd21acdc6f2f4 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0356_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0356_random_ecological", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.16516202656395, + "lat": 23.708618839125723 + }, + "bbox": [ + 90.1406065568046, + 23.686135798977755, + 90.1897174963233, + 23.73110187927369 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0356_random_ecological_packet.png", + "sha256": "7b05900b29666126f7621900b41639c2a909d2a895b9e716af13645d6ea9ce25", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0356_random_ecological", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0356_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0356_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0356_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0356_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0356_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0356_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 55.6144, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 244101, + "min": 3.7526, + "max": 7.8908, + "mean": 5.1737, + "median": 5.0808, + "p90": 5.9982 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 29, + "schools_waterpoints": 0, + "urban_landuse": 8, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0357_random_ecological_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0357_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..400157d800617d700d1a4e1d84b01a8d9fc93d33 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0357_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0357_random_ecological", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.45606602749753, + "lat": 23.797070723079905 + }, + "bbox": [ + 90.43149386983013, + 23.774587682931937, + 90.48063818516492, + 23.819553763227873 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0357_random_ecological_packet.png", + "sha256": "d009a9bc17d2df053bc2be5e039d5b8cab51ef7289f944927373b6968171f2ee", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0357_random_ecological", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0357_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0357_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0357_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0357_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0357_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0357_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 55.5871, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 72876, + "min": 7.0879, + "max": 613.0093, + "mean": 210.9702, + "median": 193.9384, + "p90": 448.6462 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 5, + "major_roads": 1054, + "schools_waterpoints": 3, + "urban_landuse": 15887, + "water_surface": 102, + "waterways": 77 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0358_random_ecological_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0358_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..678e3e5b68544900432fd6ed65664eb2297725bf --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0358_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0358_random_ecological", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.31493150473781, + "lat": 23.681347154640545 + }, + "bbox": [ + 90.29038116386457, + 23.658864114492577, + 90.33948184561106, + 23.703830194788512 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0358_random_ecological_packet.png", + "sha256": "330ea25bfebe780842fafe8fcb77d97cfc0561be6d777e8b9a102260e718026e", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0358_random_ecological", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0358_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0358_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0358_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0358_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0358_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0358_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 56.5312, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 249611, + "min": 6.0795, + "max": 20.8376, + "mean": 10.2736, + "median": 9.8886, + "p90": 13.6179 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 172, + "schools_waterpoints": 0, + "urban_landuse": 14710, + "water_surface": 262, + "waterways": 22 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0360_random_ecological_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0360_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..6b9b554238bc422315ef0b70050fda8d3143cd78 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0360_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0360_random_ecological", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.13007820916494, + "lat": 23.802740135745854 + }, + "bbox": [ + 90.10550497909803, + 23.780257095597886, + 90.15465143923184, + 23.82522317589382 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0360_random_ecological_packet.png", + "sha256": "ec5e3d7ec2a11df7bafa542c35a7959e595b25e63a234088401fb71e524c6100", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0360_random_ecological", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0360_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0360_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0360_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0360_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0360_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0360_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 53.9069, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 260053, + "min": 6.8252, + "max": 11.6969, + "mean": 8.4444, + "median": 8.1866, + "p90": 10.0475 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 2, + "major_roads": 189, + "schools_waterpoints": 4, + "urban_landuse": 101, + "water_surface": 7, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0362_random_ecological_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0362_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..0304f9b3554d15f947c674493a6705ea1258539b --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0362_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0362_random_ecological", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.07076180669364, + "lat": 23.945019369510707 + }, + "bbox": [ + 90.04616155413987, + 23.92253632936274, + 90.0953620592474, + 23.967502409658675 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0362_random_ecological_packet.png", + "sha256": "5b61e57afecfabc9eedcc907e764c289601e5791379b122ae06e365a2ec484be", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0362_random_ecological", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0362_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0362_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0362_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0362_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0362_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0362_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 55.5725, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 258516, + "min": 4.0239, + "max": 14.8369, + "mean": 6.6494, + "median": 6.9758, + "p90": 8.637 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 23, + "schools_waterpoints": 0, + "urban_landuse": 117, + "water_surface": 0, + "waterways": 1 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0363_random_ecological_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0363_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..ed88c730ff3a2e3be616b0e101f43e47073dc78f --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0363_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0363_random_ecological", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.08052651180508, + "lat": 23.976627010073766 + }, + "bbox": [ + 90.05592022746814, + 23.9541439699258, + 90.10513279614202, + 23.999110050221734 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0363_random_ecological_packet.png", + "sha256": "b009dbba7fd5b403f7ab5938be0f201f99219410b4d83eb1cc54b44b2fbdfb14", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0363_random_ecological", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0363_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0363_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0363_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0363_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0363_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0363_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 56.0333, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 259683, + "min": 3.9282, + "max": 14.8779, + "mean": 5.4507, + "median": 4.8705, + "p90": 7.2581 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 36, + "schools_waterpoints": 0, + "urban_landuse": 11, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0364_random_ecological_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0364_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..cf925d8862fd5e6463121aa5e90295c77da0db32 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0364_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0364_random_ecological", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.31281912027079, + "lat": 23.78517027640078 + }, + "bbox": [ + 90.28824921254925, + 23.762687236252813, + 90.33738902799233, + 23.80765331654875 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0364_random_ecological_packet.png", + "sha256": "4a4027326be12832430050835990869e7360ca4cf9313221ef2082b91b5695fd", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0364_random_ecological", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0364_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0364_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0364_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0364_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0364_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0364_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 54.2497, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 133431, + "min": 10.8266, + "max": 176.222, + "mean": 43.4524, + "median": 22.4521, + "p90": 137.5061 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 5, + "major_roads": 394, + "schools_waterpoints": 8, + "urban_landuse": 15846, + "water_surface": 77, + "waterways": 3 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0365_random_ecological_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0365_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..85be99006d5392fd64e1595dcd4277114d790adf --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0365_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0365_random_ecological", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.47291758703241, + "lat": 23.67873695828157 + }, + "bbox": [ + 90.4483677366453, + 23.6562539181336, + 90.49746743741953, + 23.701219998429536 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0365_random_ecological_packet.png", + "sha256": "60b84ce302defba243cfa6cd51e4102f58165adb8d2c059fb14c3fc56a2160c0", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0365_random_ecological", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0365_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0365_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0365_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0365_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0365_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0365_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 50.9631, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 246454, + "min": 0.0, + "max": 444.0591, + "mean": 117.8334, + "median": 77.3846, + "p90": 264.1238 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 897, + "schools_waterpoints": 7, + "urban_landuse": 52267, + "water_surface": 575, + "waterways": 36 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0366_random_ecological_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0366_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..5df5e258f29654078f0fe82a5fc20614562dac86 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0366_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0366_random_ecological", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.07751642977621, + "lat": 23.743473071244225 + }, + "bbox": [ + 90.05295439388573, + 23.720990031096257, + 90.1020784656667, + 23.765956111392192 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0366_random_ecological_packet.png", + "sha256": "96c563860ea0aeffbc0120865684530703abfc3e9e2129027385422086407bb8", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0366_random_ecological", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0366_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0366_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0366_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0366_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0366_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0366_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 55.0494, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 248635, + "min": 4.0949, + "max": 9.1853, + "mean": 7.0429, + "median": 7.1481, + "p90": 8.2637 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 48, + "schools_waterpoints": 1, + "urban_landuse": 35, + "water_surface": 45, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0368_random_ecological_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0368_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..dbcc7c8030ff2da92ac1f8faaa06146846e1ddd7 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0368_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0368_random_ecological", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.29300075234445, + "lat": 23.63070723526895 + }, + "bbox": [ + 90.26845991471285, + 23.608224195120982, + 90.31754158997606, + 23.653190275416918 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0368_random_ecological_packet.png", + "sha256": "456398d9ea0705a11d1304f7ffd73a96a368a00e93de338224372a500b72e0c7", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0368_random_ecological", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0368_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0368_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0368_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0368_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0368_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0368_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 50.9881, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 235146, + "min": 7.8628, + "max": 15.7117, + "mean": 9.8352, + "median": 9.5866, + "p90": 11.1334 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 32, + "schools_waterpoints": 0, + "urban_landuse": 2062, + "water_surface": 11, + "waterways": 4 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0369_random_ecological_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0369_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..fed82a5479ad3a460880dea380ee67139f7da57d --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0369_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0369_random_ecological", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.20597318524037, + "lat": 23.902406644643047 + }, + "bbox": [ + 90.1813810480818, + 23.87992360449508, + 90.23056532239893, + 23.924889684791015 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0369_random_ecological_packet.png", + "sha256": "dfad9a4287776804fa20599ae533c6b5d0b38748ec4ebfd82ea16da30ecda5ca", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0369_random_ecological", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0369_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0369_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0369_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0369_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0369_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0369_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 55.1928, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 242882, + "min": 6.1663, + "max": 42.6213, + "mean": 15.9886, + "median": 13.5854, + "p90": 26.4743 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 6, + "major_roads": 289, + "schools_waterpoints": 14, + "urban_landuse": 5677, + "water_surface": 91, + "waterways": 3 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0370_random_ecological_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0370_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..6f24dc8d77b43b256e2d2e1198594f906e5a4805 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0370_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0370_random_ecological", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.42248569929845, + "lat": 23.723249295195505 + }, + "bbox": [ + 90.39792747486598, + 23.700766255047537, + 90.44704392373092, + 23.745732335343472 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0370_random_ecological_packet.png", + "sha256": "03474140caa9174fd8525c23d29201e1976e3283713aa743ce6d98c1435b7f76", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0370_random_ecological", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0370_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0370_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0370_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0370_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0370_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0370_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 48.4898, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 253763, + "min": 0.0, + "max": 1103.1484, + "mean": 287.0352, + "median": 263.9608, + "p90": 447.1417 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 353, + "major_roads": 2522, + "schools_waterpoints": 293, + "urban_landuse": 61093, + "water_surface": 80, + "waterways": 1411 + }, + "label_counts": { + "vector_label": 15, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0371_random_ecological_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0371_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..65459876f50dd49c537d96ba4b29a6b3e3836a50 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0371_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0371_random_ecological", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.37509508217855, + "lat": 23.53303821978752 + }, + "bbox": [ + 90.35057249858035, + 23.510555179639553, + 90.39961766577674, + 23.55552125993549 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0371_random_ecological_packet.png", + "sha256": "5c725856fe40ba950f46fa049b5b2a1201376a00bcb01fff07e0ea50a835006c", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0371_random_ecological", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0371_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0371_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0371_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0371_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0371_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0371_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 59.583, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 220976, + "min": 3.4491, + "max": 14.0608, + "mean": 9.9453, + "median": 9.8394, + "p90": 12.5759 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 8, + "major_roads": 29, + "schools_waterpoints": 14, + "urban_landuse": 158, + "water_surface": 29, + "waterways": 4 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0373_uncertain_sparse_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0373_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..1169a40449a4b146274dcabefa1d29c127f61052 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0373_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0373_uncertain_sparse_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.27828349940214, + "lat": 23.967299945578436 + }, + "bbox": [ + 90.25367899606398, + 23.944816905430468, + 90.30288800274029, + 23.989782985726404 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0373_uncertain_sparse_context_packet.png", + "sha256": "1d5f8c85f70d84048ca6300120c5b218f2f53a17d5a5612596c599d40cc8c7bd", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0373_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0373_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0373_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0373_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0373_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0373_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0373_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 54.9566, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 247443, + "min": 16.5461, + "max": 80.0357, + "mean": 32.9726, + "median": 27.2247, + "p90": 55.0832 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 9, + "major_roads": 636, + "schools_waterpoints": 12, + "urban_landuse": 24298, + "water_surface": 195, + "waterways": 12 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0374_uncertain_sparse_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0374_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..321fe6050db96fa7f20adc9802003219f1574ebf --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0374_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0374_uncertain_sparse_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.44085194352061, + "lat": 23.702005485421648 + }, + "bbox": [ + 90.41629771821832, + 23.67952244527368, + 90.46540616882291, + 23.724488525569615 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0374_uncertain_sparse_context_packet.png", + "sha256": "45111433b8e64c432de8ea41b613531a0d22855421e4c1f97cd8ce15a24b0dc3", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0374_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0374_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0374_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0374_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0374_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0374_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0374_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 49.0528, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 248743, + "min": 0.0, + "max": 611.7536, + "mean": 226.976, + "median": 201.9939, + "p90": 388.397 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 218, + "major_roads": 1565, + "schools_waterpoints": 144, + "urban_landuse": 60385, + "water_surface": 129, + "waterways": 31 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0375_uncertain_sparse_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0375_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..d769e6cc138f55e75f22eb5911e19815fdb8fdfa --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0375_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0375_uncertain_sparse_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.36481395597593, + "lat": 23.783769147471528 + }, + "bbox": [ + 90.34024431306055, + 23.76128610732356, + 90.38938359889131, + 23.806252187619496 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0375_uncertain_sparse_context_packet.png", + "sha256": "47c1362310bf609102094a6d9e60c3328974b4025bd2e9b8ba08b577dc7ca2a9", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0375_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0375_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0375_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0375_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0375_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0375_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0375_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 51.7506, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 236017, + "min": 78.2297, + "max": 1147.9846, + "mean": 332.6467, + "median": 313.5133, + "p90": 513.5849 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 867, + "major_roads": 3078, + "schools_waterpoints": 199, + "urban_landuse": 59777, + "water_surface": 70, + "waterways": 22 + }, + "label_counts": { + "vector_label": 2, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0376_uncertain_sparse_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0376_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..7ced617233961f9b03f527b9f6aa99fdacd50793 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0376_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0376_uncertain_sparse_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.35408216290698, + "lat": 23.788635032151255 + }, + "bbox": [ + 90.3295116002768, + 23.766151992003287, + 90.37865272553715, + 23.811118072299223 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0376_uncertain_sparse_context_packet.png", + "sha256": "d68ad438609a39ee8e5bd2e80962d0788db983bf6e659ed88d188c8b0b9cb5d9", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0376_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0376_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0376_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0376_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0376_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0376_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0376_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 51.1159, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 205535, + "min": 46.9927, + "max": 1155.8999, + "mean": 336.263, + "median": 313.3766, + "p90": 544.9583 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 796, + "major_roads": 3013, + "schools_waterpoints": 210, + "urban_landuse": 59354, + "water_surface": 62, + "waterways": 20 + }, + "label_counts": { + "vector_label": 2, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0377_uncertain_sparse_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0377_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..500bec303f8805e38736ef82b0eaf1ee93cbfd4c --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0377_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0377_uncertain_sparse_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.26157601304563, + "lat": 23.777475827761958 + }, + "bbox": [ + 90.23700755928374, + 23.75499278761399, + 90.28614446680751, + 23.799958867909925 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0377_uncertain_sparse_context_packet.png", + "sha256": "04414fe5691265d275e216c72b05accb2838c686bccdd3da5365d651bb95abe8", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0377_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0377_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0377_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0377_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0377_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0377_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0377_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 55.7341, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 228422, + "min": 5.9141, + "max": 29.5867, + "mean": 16.402, + "median": 15.319, + "p90": 25.7032 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 8, + "major_roads": 239, + "schools_waterpoints": 7, + "urban_landuse": 17664, + "water_surface": 150, + "waterways": 4 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0380_uncertain_sparse_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0380_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..bf1b80342048fefd4ea60e6a95ed298d36d0c1d1 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0380_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0380_uncertain_sparse_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.39057251576102, + "lat": 23.69867486134282 + }, + "bbox": [ + 90.36601891702188, + 23.676191821194852, + 90.41512611450017, + 23.721157901490788 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0380_uncertain_sparse_context_packet.png", + "sha256": "7110c56ee1838b569f270f3906d275f4ddbda6246a9b8b4b7a9f28e27b4b511b", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0380_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0380_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0380_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0380_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0380_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0380_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0380_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 54.485, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 244998, + "min": 0.0, + "max": 1104.2826, + "mean": 154.8676, + "median": 94.687, + "p90": 432.8779 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 78, + "major_roads": 1675, + "schools_waterpoints": 170, + "urban_landuse": 70271, + "water_surface": 88, + "waterways": 1148 + }, + "label_counts": { + "vector_label": 10, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0381_uncertain_sparse_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0381_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..6c6ea98e499e79f0385672010c924f827bd54091 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0381_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0381_uncertain_sparse_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.38864976973015, + "lat": 23.78584479818212 + }, + "bbox": [ + 90.36407973452019, + 23.76336175803415, + 90.41321980494011, + 23.808327838330086 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0381_uncertain_sparse_context_packet.png", + "sha256": "38b4044acb2db0be438fe6897463355f67d36aadc410e13c16650a34cb9f0d67", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0381_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0381_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0381_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0381_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0381_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0381_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0381_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 49.8771, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 249923, + "min": 6.82, + "max": 612.8134, + "mean": 281.7975, + "median": 265.5542, + "p90": 446.6972 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 614, + "major_roads": 2387, + "schools_waterpoints": 584, + "urban_landuse": 45913, + "water_surface": 117, + "waterways": 21 + }, + "label_counts": { + "vector_label": 4, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0382_uncertain_sparse_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0382_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..005584173e5ebc30f1381e890f3a52b76bab034d --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0382_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0382_uncertain_sparse_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.24844816158965, + "lat": 23.830956442096753 + }, + "bbox": [ + 90.22386958928618, + 23.808473401948785, + 90.27302673389312, + 23.85343948224472 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0382_uncertain_sparse_context_packet.png", + "sha256": "786ea9964703bc177be025a54370278221cecae53ddd1b98b36bff54f271ef58", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0382_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0382_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0382_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0382_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0382_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0382_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0382_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 55.7916, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 238793, + "min": 11.5258, + "max": 129.2775, + "mean": 35.0451, + "median": 28.5498, + "p90": 63.4465 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 75, + "major_roads": 652, + "schools_waterpoints": 23, + "urban_landuse": 38855, + "water_surface": 129, + "waterways": 4 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0383_uncertain_sparse_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0383_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..63ba156158cec531f2cbe70f1b13d6191a415f10 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0383_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0383_uncertain_sparse_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.44063090587338, + "lat": 23.708560632127757 + }, + "bbox": [ + 90.41607544706902, + 23.68607759197979, + 90.46518636467773, + 23.731043672275725 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0383_uncertain_sparse_context_packet.png", + "sha256": "c1c64d4126919b6dec126fe7b3e9b069256246897daff4f13273b232d8e655a2", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0383_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0383_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0383_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0383_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0383_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0383_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0383_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 48.9153, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 244111, + "min": 0.0, + "max": 613.0318, + "mean": 243.8245, + "median": 214.6516, + "p90": 399.3672 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 219, + "major_roads": 1677, + "schools_waterpoints": 146, + "urban_landuse": 57932, + "water_surface": 96, + "waterways": 30 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0384_uncertain_sparse_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0384_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..753f8eb6a77ed7bc4c595d253f9e680817881bfd --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0384_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0384_uncertain_sparse_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.2435024690218, + "lat": 24.022703904356664 + }, + "bbox": [ + 90.21888737296472, + 24.000220864208696, + 90.2681175650789, + 24.045186944504632 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0384_uncertain_sparse_context_packet.png", + "sha256": "110f23f35ec1791ca317b3e6ca35fcabb2548a606f984e863fb9e6ac85a8a993", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0384_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0384_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0384_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0384_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0384_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0384_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0384_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 53.4127, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 224396, + "min": 3.5326, + "max": 19.2635, + "mean": 12.2331, + "median": 11.9243, + "p90": 16.8819 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 7, + "major_roads": 184, + "schools_waterpoints": 16, + "urban_landuse": 11107, + "water_surface": 117, + "waterways": 3 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0386_uncertain_sparse_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0386_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..da5f60dce6fe8d99ed259786c54a7610dee2f4d7 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0386_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0386_uncertain_sparse_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.38778055410233, + "lat": 23.844975979292336 + }, + "bbox": [ + 90.36319932437732, + 23.822492939144368, + 90.41236178382735, + 23.867459019440304 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0386_uncertain_sparse_context_packet.png", + "sha256": "86e77fed66c4d1e51b2072c06445d96ef7a97bb4041cbd89803dbd373068cee5", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0386_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0386_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0386_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0386_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0386_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0386_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0386_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 58.0994, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 184946, + "min": 0.9238, + "max": 296.3398, + "mean": 40.1069, + "median": 5.3018, + "p90": 120.2919 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 179, + "major_roads": 1420, + "schools_waterpoints": 122, + "urban_landuse": 27294, + "water_surface": 145, + "waterways": 12 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0387_uncertain_sparse_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0387_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..b5f400d2ab5c589a997b6f3c11d200a0e42e5814 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0387_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0387_uncertain_sparse_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.43185032277084, + "lat": 23.773324459330567 + }, + "bbox": [ + 90.40728265320504, + 23.7508414191826, + 90.45641799233664, + 23.795807499478535 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0387_uncertain_sparse_context_packet.png", + "sha256": "fea440ef69b085d22a82f341f6f538ed5993c7610744020a980eaeee0937ba72", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0387_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0387_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0387_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0387_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0387_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0387_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0387_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 49.7382, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 180755, + "min": 42.4729, + "max": 637.9182, + "mean": 298.2595, + "median": 280.3489, + "p90": 501.406 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 343, + "major_roads": 1946, + "schools_waterpoints": 377, + "urban_landuse": 53068, + "water_surface": 87, + "waterways": 13 + }, + "label_counts": { + "vector_label": 4, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0388_uncertain_sparse_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0388_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..0c32812f41c107c39cbbb34f83328b9847749973 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0388_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0388_uncertain_sparse_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.50240667687774, + "lat": 23.606712024157908 + }, + "bbox": [ + 90.47787033300102, + 23.58422898400994, + 90.52694302075446, + 23.629195064305875 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0388_uncertain_sparse_context_packet.png", + "sha256": "276a13fe77fa9bad2f52c077f74e4fb9788e51d1a23c89d20da476acac139067", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0388_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0388_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0388_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0388_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0388_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0388_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0388_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 52.3407, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 177641, + "min": 0.0, + "max": 203.8834, + "mean": 95.9686, + "median": 94.4832, + "p90": 157.7556 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 6, + "major_roads": 494, + "schools_waterpoints": 8, + "urban_landuse": 42541, + "water_surface": 100, + "waterways": 26 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0389_uncertain_sparse_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0389_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..2e77724d25ec2704d2f7e39c544436e5a56fd8a6 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0389_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0389_uncertain_sparse_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.473422144886, + "lat": 23.61501426252712 + }, + "bbox": [ + 90.44888424686283, + 23.59253122237915, + 90.49796004290917, + 23.637497302675087 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0389_uncertain_sparse_context_packet.png", + "sha256": "fea80fc017208426daae5bfde8449933f53c2593e1705aedc7adada8ef393222", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0389_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0389_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0389_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0389_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0389_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0389_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0389_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 52.7821, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 248706, + "min": 0.0, + "max": 184.8379, + "mean": 74.6096, + "median": 73.521, + "p90": 139.3773 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 356, + "schools_waterpoints": 7, + "urban_landuse": 53627, + "water_surface": 108, + "waterways": 32 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0390_uncertain_sparse_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0390_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..5cde326ebcbf399d8718bd832a1ab03fb1b82b05 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0390_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0390_uncertain_sparse_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.42584563852452, + "lat": 23.776028758648522 + }, + "bbox": [ + 90.40127745813523, + 23.753545718500554, + 90.45041381891382, + 23.79851179879649 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0390_uncertain_sparse_context_packet.png", + "sha256": "5322984a5b51e5907606f3997374462f926a8a0d63d1faad3dd82e33d395cb72", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0390_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0390_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0390_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0390_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0390_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0390_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0390_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 49.705, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 196690, + "min": 65.7903, + "max": 637.2819, + "mean": 280.7013, + "median": 261.6662, + "p90": 482.7987 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 354, + "major_roads": 2084, + "schools_waterpoints": 622, + "urban_landuse": 57302, + "water_surface": 92, + "waterways": 18 + }, + "label_counts": { + "vector_label": 4, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0391_uncertain_sparse_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0391_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..3f51c0cb09dd5a6febddad74fc7b86acd4fa8fa6 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0391_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0391_uncertain_sparse_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.23858259518273, + "lat": 23.860603528501816 + }, + "bbox": [ + 90.21399840082302, + 23.838120488353848, + 90.26316678954245, + 23.883086568649784 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0391_uncertain_sparse_context_packet.png", + "sha256": "949c5f86ea3757a915f9efc789bd66f022980b8c9d7e894870092dccea736d57", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0391_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0391_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0391_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0391_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0391_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0391_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0391_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 56.0119, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 240282, + "min": 7.2745, + "max": 129.1664, + "mean": 24.8506, + "median": 17.3239, + "p90": 56.3988 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 82, + "major_roads": 540, + "schools_waterpoints": 13, + "urban_landuse": 27159, + "water_surface": 122, + "waterways": 7 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0392_uncertain_sparse_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0392_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..c667b72de8c920fc32df85a3a8f7e9e88949a557 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0392_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0392_uncertain_sparse_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.25078999701576, + "lat": 23.84845710052798 + }, + "bbox": [ + 90.22620810712252, + 23.825974060380013, + 90.275371886909, + 23.87094014067595 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0392_uncertain_sparse_context_packet.png", + "sha256": "a9ab48ed39eaea184143e041a25c508facdb284bf8cd09d0084a613fa1accb4c", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0392_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0392_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0392_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0392_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0392_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0392_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0392_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 56.5962, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 237535, + "min": 8.8681, + "max": 129.427, + "mean": 33.35, + "median": 25.5236, + "p90": 63.6755 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 95, + "major_roads": 812, + "schools_waterpoints": 29, + "urban_landuse": 41414, + "water_surface": 144, + "waterways": 6 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0393_uncertain_sparse_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0393_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..fca9001c3d1ee986140da1da73daea1260db49b7 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0393_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0393_uncertain_sparse_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.26055521612908, + "lat": 23.791127234082676 + }, + "bbox": [ + 90.23598418234539, + 23.76864419393471, + 90.28512624991276, + 23.813610274230644 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0393_uncertain_sparse_context_packet.png", + "sha256": "1f7696d1d7f9d27e4fc8235c53ed8d3e9c5bc327b75da7d9647e9d18003e9b79", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0393_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0393_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0393_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0393_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0393_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0393_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0393_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 56.4192, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 222657, + "min": 8.1115, + "max": 34.0812, + "mean": 21.045, + "median": 21.8098, + "p90": 28.0013 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 8, + "major_roads": 300, + "schools_waterpoints": 7, + "urban_landuse": 21123, + "water_surface": 162, + "waterways": 3 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0394_uncertain_sparse_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0394_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..1ed7f0f089d5f313b3d6e5836506ae0a1d21601e --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0394_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0394_uncertain_sparse_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.36573679412449, + "lat": 23.78243391184459 + }, + "bbox": [ + 90.3411674035428, + 23.75995087169662, + 90.39030618470618, + 23.804916951992556 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0394_uncertain_sparse_context_packet.png", + "sha256": "dd847584a2c63e75cbcf7892a98c02d0b865378a7e1239ed05cdd221682f06d7", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0394_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0394_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0394_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0394_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0394_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0394_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0394_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 51.6961, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 238138, + "min": 93.9545, + "max": 1140.7534, + "mean": 328.7279, + "median": 311.0093, + "p90": 507.5756 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 887, + "major_roads": 3042, + "schools_waterpoints": 194, + "urban_landuse": 58741, + "water_surface": 71, + "waterways": 22 + }, + "label_counts": { + "vector_label": 3, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0395_uncertain_sparse_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0395_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..7c4fef39cea76efd9ae585833c86b27091728b71 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0395_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0395_uncertain_sparse_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.27554152273902, + "lat": 23.7807797431511 + }, + "bbox": [ + 90.2509724447375, + 23.758296703003133, + 90.30011060074054, + 23.80326278329907 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0395_uncertain_sparse_context_packet.png", + "sha256": "24e43cc35a8bdb9858a5048b6796d5fcf4aa387731a304fc41866714464bded3", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0395_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0395_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0395_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0395_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0395_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0395_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0395_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 55.8928, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 222675, + "min": 6.2445, + "max": 30.0213, + "mean": 18.028, + "median": 16.7494, + "p90": 26.2559 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 8, + "major_roads": 291, + "schools_waterpoints": 10, + "urban_landuse": 20471, + "water_surface": 150, + "waterways": 7 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0398_uncertain_sparse_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0398_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..e60caae28a75d01e89501b25d5e2d453336ed3a9 --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0398_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0398_uncertain_sparse_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.46986091868473, + "lat": 23.624851136795222 + }, + "bbox": [ + 90.44532117831547, + 23.602368096647254, + 90.494400659054, + 23.64733417694319 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0398_uncertain_sparse_context_packet.png", + "sha256": "f3001896027f1e17fc9bc034ce6fa3834a510ed752492edfbd58486117f9780a", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0398_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0398_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0398_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0398_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0398_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0398_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0398_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 52.662, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 235909, + "min": 0.0, + "max": 180.9054, + "mean": 80.319, + "median": 86.979, + "p90": 144.2218 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 2, + "major_roads": 328, + "schools_waterpoints": 4, + "urban_landuse": 55700, + "water_surface": 149, + "waterways": 35 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/dhaka_dengue/dhaka_dengue_s0399_uncertain_sparse_context_sidecar.json b/sidecars/dhaka_dengue/dhaka_dengue_s0399_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..0b637fc584bb59782c8859b2df94bdf4907daced --- /dev/null +++ b/sidecars/dhaka_dengue/dhaka_dengue_s0399_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "dhaka_dengue_s0399_uncertain_sparse_context", + "aoi_id": "dhaka_dengue", + "split": "train", + "disease_module": "dengue_aedes", + "primary_disease": "dengue", + "country": "Bangladesh", + "name": "Dhaka District, Bangladesh", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 90.49595760968027, + "lat": 23.71032970111599 + }, + "bbox": [ + 90.47140181790846, + 23.687846660968024, + 90.52051340145209, + 23.73281274126396 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/dhaka_dengue/dhaka_dengue_s0399_uncertain_sparse_context_packet.png", + "sha256": "e90dbc89ea29885ea31b57f6b5b05c86186683ca05bda05a32b8ca58d53403fc", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/dhaka_dengue/dhaka_dengue_s0399_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/dhaka_dengue/dhaka_dengue_s0399_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/dhaka_dengue/dhaka_dengue_s0399_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/dhaka_dengue/dhaka_dengue_s0399_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0399_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/dhaka_dengue/dhaka_dengue_s0399_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/dhaka_dengue/dhaka_dengue_s0399_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/dhaka_bangladesh/dhaka_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/dhaka_bangladesh/dhaka_worldpop_2020_100m_arcgis.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/dhaka_bangladesh/dhaka_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/dhaka_bangladesh/osm_health_facilities_dhaka.overpass.json", + "major_roads": "data/raw/osm/dhaka_bangladesh/osm_major_roads_dhaka.overpass.json", + "schools_waterpoints": "data/raw/osm/dhaka_bangladesh/osm_schools_waterpoints_dhaka.overpass.json", + "urban_landuse": "data/raw/osm/dhaka_bangladesh/osm_urban_landuse_dhaka.overpass.json", + "water_surface": "data/raw/osm/dhaka_bangladesh/osm_water_surface_dhaka.overpass.json", + "waterways": "data/raw/osm/dhaka_bangladesh/osm_waterways_dhaka.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/dhaka_bangladesh/gbif_aedes_dhaka_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/dhaka_dengue_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.000707, + "sentinel_datetime": "2025-11-08T04:42:14Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 50.8952, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 195965, + "min": 47.7787, + "max": 376.3195, + "mean": 109.0093, + "median": 101.5446, + "p90": 160.8138 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 664, + "schools_waterpoints": 9, + "urban_landuse": 36804, + "water_surface": 211, + "waterways": 31 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0002_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0002_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..259fc0dfa0e6fc6451415228aff4dd93cc35c384 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0002_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0002_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.90231645436198, + "lat": -0.17861222862904902 + }, + "bbox": [ + 34.87983330496842, + -0.20109526877701728, + 34.92479960375554, + -0.15612918848108076 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0002_label_positive_jitter_packet.png", + "sha256": "076b214fb40e2515a059679627215c7057ee63e233d92ca575b4c64d24ce1415", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0002_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0002_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0002_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0002_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0002_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0002_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0002_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 55.2365, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 234153, + "min": 0.0003, + "max": 37.4885, + "mean": 9.0243, + "median": 7.2286, + "p90": 19.3755 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 3, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 27 + }, + "label_counts": { + "vector_label": 99, + "disease_label": 5, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0004_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0004_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..b323bcc0c3cda4a78b1fd146563197ffbd0b5fc0 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0004_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0004_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.781452539661046, + "lat": -0.13818660604845273 + }, + "bbox": [ + 34.75896943412287, + -0.160669646196421, + 34.803935645199225, + -0.11570356590048447 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0004_label_positive_jitter_packet.png", + "sha256": "dbc654bdd35392dbf1197712bc6fea97d6fc8a3b1443593bdb250d4c8184d316", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0004_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0004_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0004_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0004_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0004_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0004_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0004_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 41.8153, + "repair_attempts": 2 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 184829, + "min": 0.0001, + "max": 65.0964, + "mean": 25.4889, + "median": 24.3544, + "p90": 52.7298 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 8, + "urban_landuse": 1, + "water_surface": 18, + "waterways": 34 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 1, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0009_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0009_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..cd38a9161ceac86533ea5a5d95151b0e8c98df70 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0009_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0009_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.783347260955324, + "lat": -0.15058959440686145 + }, + "bbox": [ + 34.760864143152084, + -0.1730726345548297, + 34.805830378758564, + -0.1281065542588932 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0009_label_positive_jitter_packet.png", + "sha256": "8c75615e6b6976f1d444e80155ca1c9fe924ded7f715bec4ccdd6d07b9514920", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0009_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0009_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0009_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0009_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0009_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0009_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0009_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 43.5637, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 164713, + "min": 0.0001, + "max": 55.7903, + "mean": 16.114, + "median": 12.0037, + "p90": 39.5385 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 3, + "urban_landuse": 0, + "water_surface": 2, + "waterways": 41 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 1, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0010_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0010_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..2587801d2f451064216cd61e5fd489a755d9cc96 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0010_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0010_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.91524809951322, + "lat": -0.1910956647581762 + }, + "bbox": [ + 34.89276493431532, + -0.21357870490614445, + 34.93773126471112, + -0.16861262461020793 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0010_label_positive_jitter_packet.png", + "sha256": "00bc4d32c1361633a557b025d97d35721579060adfc17223e5c1bfbf3e03595d", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0010_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0010_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0010_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0010_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0010_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0010_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0010_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 57.8051, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 240511, + "min": 0.0002, + "max": 37.4989, + "mean": 9.4421, + "median": 6.3202, + "p90": 23.5714 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 7, + "urban_landuse": 0, + "water_surface": 1, + "waterways": 48 + }, + "label_counts": { + "vector_label": 98, + "disease_label": 6, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0016_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0016_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..2199879b37f400d9cfb595cf7cf37056658a5a5d --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0016_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0016_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.96815178750472, + "lat": -0.18427614598051711 + }, + "bbox": [ + 34.94566863107278, + -0.20675918612848537, + 34.99063494393667, + -0.16179310583254886 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0016_label_positive_jitter_packet.png", + "sha256": "e37dbffccd293c6ce3f1b3c8fd3a6f3687071cbbf51e79975ff22b672f9dfead", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0016_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0016_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0016_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0016_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0016_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0016_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0016_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 55.9238, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 240916, + "min": 0.0002, + "max": 25.6929, + "mean": 4.6608, + "median": 2.3779, + "p90": 12.7406 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 6, + "urban_landuse": 0, + "water_surface": 1, + "waterways": 12 + }, + "label_counts": { + "vector_label": 18, + "disease_label": 3, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0020_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0020_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..b40590ba76d27c1c9835568eced68ff24f944c65 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0020_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0020_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.813972420799345, + "lat": 0.02071091952272737 + }, + "bbox": [ + 34.79148937918252, + -0.0017721206252408958, + 34.83645546241617, + 0.043193959670695635 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0020_label_positive_jitter_packet.png", + "sha256": "90adc029be2776ee349ad1641826008a125fee69c78a6724864c972a66d7d7ee", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0020_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0020_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0020_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0020_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0020_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0020_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0020_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 36.9099, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.4433, + "mean": 0.0115, + "median": 0.0, + "p90": 0.0021 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 48896, + "min": 0.0038, + "max": 27.9977, + "mean": 8.5614, + "median": 7.4235, + "p90": 15.9615 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 2, + "urban_landuse": 0, + "water_surface": 29, + "waterways": 5 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 3, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0026_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0026_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..164f11bad54c50851bb6a02011972a3b3c7fe6b3 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0026_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0026_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.916520244848066, + "lat": -0.17870361836741636 + }, + "bbox": [ + 34.89403709534268, + -0.20118665851538461, + 34.93900339435345, + -0.1562205782194481 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0026_label_positive_jitter_packet.png", + "sha256": "5173f75c224dfda9994477ded162675c74d759d0added3b1a454fb0464ede7f1", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0026_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0026_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0026_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0026_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0026_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0026_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0026_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 58.3304, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 230491, + "min": 0.0002, + "max": 37.4744, + "mean": 10.7233, + "median": 8.0241, + "p90": 24.7433 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 7, + "urban_landuse": 0, + "water_surface": 1, + "waterways": 43 + }, + "label_counts": { + "vector_label": 121, + "disease_label": 8, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0027_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0027_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..33820506757040aa786ad6efe2d039d0211bc391 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0027_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0027_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.97050945963155, + "lat": -0.15792785025910633 + }, + "bbox": [ + 34.94802633407557, + -0.1804108904070746, + 34.99299258518753, + -0.13544481011113807 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0027_label_positive_jitter_packet.png", + "sha256": "679e937bc9119af015821dee5f581710b206f83e080ab64835a3b17e9ca05c6d", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0027_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0027_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0027_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0027_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0027_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0027_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0027_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 53.4103, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 227265, + "min": 0.0002, + "max": 22.3828, + "mean": 6.0118, + "median": 4.8639, + "p90": 14.0403 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 3, + "urban_landuse": 0, + "water_surface": 1, + "waterways": 22 + }, + "label_counts": { + "vector_label": 3, + "disease_label": 4, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0032_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0032_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..4e9011a9ed2336feb4264df7f958e65613e57fc8 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0032_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0032_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 35.216520257537276, + "lat": -0.12204757058439453 + }, + "bbox": [ + 35.19403716638124, + -0.14453061073236279, + 35.23900334869331, + -0.09956453043642627 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0032_label_positive_jitter_packet.png", + "sha256": "c62d511ff51561ff234ebdb1ac509d678e4515106aef2205c569364ab4330ed0", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0032_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0032_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0032_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0032_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0032_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0032_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0032_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 58.3499, + "repair_attempts": 1 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 211949, + "min": 0.0003, + "max": 12.6603, + "mean": 1.6117, + "median": 1.3853, + "p90": 3.2829 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 6, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 10 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0039_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0039_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..8cb8885697ca2b9f452a0ee3d3e7914d8dedcf85 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0039_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0039_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.86976394532458, + "lat": -0.08418821510136765 + }, + "bbox": [ + 34.847280880905885, + -0.1066712552493359, + 34.89224700974327, + -0.06170517495339938 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0039_label_positive_jitter_packet.png", + "sha256": "38a8b0965c6465049411ef50b3bac90383be5c8e0863050c3868d7cd50190fbd", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0039_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0039_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0039_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0039_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0039_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0039_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0039_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 55.7453, + "repair_attempts": 1 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 183041, + "min": 0.0003, + "max": 39.586, + "mean": 8.2045, + "median": 6.2115, + "p90": 18.6467 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 8, + "urban_landuse": 0, + "water_surface": 4, + "waterways": 11 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0041_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0041_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..c2c798bed1b9e278237a0ea9aed797b5b138b8cd --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0041_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0041_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.976103199723056, + "lat": -0.18187875662643538 + }, + "bbox": [ + 34.95362004629709, + -0.20436179677440364, + 34.99858635314902, + -0.15939571647846712 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0041_label_positive_jitter_packet.png", + "sha256": "9faad3e11974bd496615222a550c401f19ba80a8aaf399f59c5fc26a35bfbce9", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0041_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0041_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0041_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0041_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0041_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0041_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0041_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 54.8212, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 236528, + "min": 0.0002, + "max": 20.8066, + "mean": 3.8103, + "median": 2.0908, + "p90": 10.4821 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 6, + "urban_landuse": 0, + "water_surface": 1, + "waterways": 11 + }, + "label_counts": { + "vector_label": 18, + "disease_label": 1, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0046_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0046_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..ecd9f45d528d3b4f236319c4225b712612eb90fb --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0046_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0046_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.81585844530168, + "lat": -0.2185201472970873 + }, + "bbox": [ + 34.79337524163578, + -0.24100318744505556, + 34.83834164896758, + -0.19603710714911904 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0046_label_positive_jitter_packet.png", + "sha256": "72533d7237eeeee6d2a9393186401cf3ae5a5bda6363a146c1bb4842656ec116", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0046_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0046_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0046_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0046_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0046_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0046_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0046_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 52.7832, + "repair_attempts": 1 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 99313, + "min": 0.0, + "max": 21.0013, + "mean": 6.3377, + "median": 4.8227, + "p90": 15.6866 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 0, + "urban_landuse": 1, + "water_surface": 1, + "waterways": 4 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0047_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0047_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..f5c10714532d27c71e5acc4ff5df02bc571f33b8 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0047_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0047_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.97157629205718, + "lat": -0.050406025568393534 + }, + "bbox": [ + 34.9490932432087, + -0.0728890657163618, + 34.99405934090566, + -0.02792298542042527 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0047_label_positive_jitter_packet.png", + "sha256": "82cd48c9f1da30a90b7a870db139bdd4ecf783a5a3998cd70320182f8740585b", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0047_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0047_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0047_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0047_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0047_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0047_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0047_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 56.9874, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 78193, + "min": 0.0003, + "max": 30.7668, + "mean": 3.2929, + "median": 1.6101, + "p90": 9.6035 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 3, + "urban_landuse": 2, + "water_surface": 0, + "waterways": 3 + }, + "label_counts": { + "vector_label": 28, + "disease_label": 2, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0053_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0053_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..d2c643c5b335c4ab6be1fa0b6b607d2362da6807 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0053_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0053_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.91455988531459, + "lat": -0.18252112006265797 + }, + "bbox": [ + 34.89207673108705, + -0.20500416021062623, + 34.937043039542125, + -0.1600380799146897 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0053_label_positive_jitter_packet.png", + "sha256": "0c8910abfdf2ad29f0bea792c597e7f72cc682c8d5f3a2b7a25a1ecfc2fd2825", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0053_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0053_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0053_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0053_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0053_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0053_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0053_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 58.0936, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 234499, + "min": 0.0002, + "max": 37.5204, + "mean": 10.3733, + "median": 7.5649, + "p90": 24.2556 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 7, + "urban_landuse": 0, + "water_surface": 1, + "waterways": 43 + }, + "label_counts": { + "vector_label": 99, + "disease_label": 7, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0054_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0054_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..33c0e53d9c269c70f5f4d8a31bc3383ad7bd22f1 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0054_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0054_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 35.197486982258404, + "lat": -0.13933139059824856 + }, + "bbox": [ + 35.17500387563231, + -0.16181443074621682, + 35.2199700888845, + -0.1168483504502803 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0054_label_positive_jitter_packet.png", + "sha256": "a0ab67669b7688fcb6a59a6df4fa810d0d885bc83ee6459a78377c0f24fc5556", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0054_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0054_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0054_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0054_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0054_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0054_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0054_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 57.5052, + "repair_attempts": 1 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 227147, + "min": 0.0003, + "max": 47.0395, + "mean": 5.5071, + "median": 2.2076, + "p90": 17.0978 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 11, + "urban_landuse": 1, + "water_surface": 0, + "waterways": 6 + }, + "label_counts": { + "vector_label": 3, + "disease_label": 1, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0055_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0055_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..71e31c2dab7d4c8e76e6b200c459ecaac40ea2d5 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0055_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0055_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.983300675411975, + "lat": -0.3421747103575861 + }, + "bbox": [ + 34.96081723432155, + -0.3646577505055544, + 35.0057841165024, + -0.31969167020961786 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0055_label_positive_jitter_packet.png", + "sha256": "1ebe62ba7b1fc22d9298a20e1582334821b672187200cc6404af03d0d1fb103a", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0055_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0055_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0055_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0055_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0055_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0055_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0055_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 55.1621, + "repair_attempts": 1 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 262144, + "min": 0.0079, + "max": 20.4441, + "mean": 5.4703, + "median": 4.443, + "p90": 10.7142 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 4, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 4 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 2, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0058_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0058_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..88ca35f16087f23a097f02db209d937a7bb1ab10 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0058_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0058_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.914879444144, + "lat": -0.1826191388468026 + }, + "bbox": [ + 34.8923962897939, + -0.20510217899477085, + 34.9373625984941, + -0.16013609869883433 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0058_label_positive_jitter_packet.png", + "sha256": "0b914f2c94d9841ad910bf671bdf1fea1e9e2fae17f20f92811cb2779131f33e", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0058_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0058_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0058_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0058_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0058_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0058_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0058_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 58.1289, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 234584, + "min": 0.0002, + "max": 37.5099, + "mean": 10.3738, + "median": 7.5153, + "p90": 24.3229 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 7, + "urban_landuse": 0, + "water_surface": 1, + "waterways": 43 + }, + "label_counts": { + "vector_label": 99, + "disease_label": 6, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0063_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0063_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..ff1bd59c9f5f4d86d647e42d2a0cceb313b053db --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0063_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0063_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.94450892219741, + "lat": -0.17415419276017094 + }, + "bbox": [ + 34.9220257781892, + -0.1966372329081392, + 34.96699206620561, + -0.15167115261220268 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0063_label_positive_jitter_packet.png", + "sha256": "e30f2a06fc74697897ce129ed32dc6d65d4ee0035c2eb300bd1ef55d162f8866", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0063_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0063_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0063_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0063_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0063_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0063_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0063_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 58.132, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 250682, + "min": 0.0001, + "max": 35.692, + "mean": 11.1504, + "median": 9.4754, + "p90": 22.4872 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 8, + "urban_landuse": 0, + "water_surface": 2, + "waterways": 49 + }, + "label_counts": { + "vector_label": 22, + "disease_label": 6, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0068_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0068_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..c096c4601493d8f27550e0ffc0cc5186ac8539c7 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0068_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0068_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.92069764272954, + "lat": -0.19070369898182382 + }, + "bbox": [ + 34.89821447804411, + -0.21318673912979208, + 34.943180807414976, + -0.16822065883385556 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0068_label_positive_jitter_packet.png", + "sha256": "8e392c1cc0332d579073e02543880f89c44609f62a85adb68ac374180330df46", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0068_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0068_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0068_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0068_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0068_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0068_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0068_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 58.1291, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 241355, + "min": 0.0002, + "max": 37.5139, + "mean": 9.8784, + "median": 6.6498, + "p90": 24.1772 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 6, + "urban_landuse": 0, + "water_surface": 1, + "waterways": 52 + }, + "label_counts": { + "vector_label": 98, + "disease_label": 8, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0070_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0070_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..2d03b29097ae587f860419adbbb5a9d8f5a6a3f3 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0070_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0070_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.96249837795105, + "lat": -0.17439494726220842 + }, + "bbox": [ + 34.94001523365549, + -0.19687798741017667, + 34.98498152224661, + -0.15191190711424016 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0070_label_positive_jitter_packet.png", + "sha256": "609d57497df0e3c55f0ad9197cd0f283f4d83706abab665f1f5e3b5ecee22e9f", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0070_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0070_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0070_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0070_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0070_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0070_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0070_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 55.6635, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 247937, + "min": 0.0002, + "max": 28.2474, + "mean": 7.4792, + "median": 6.0599, + "p90": 17.3188 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 3, + "urban_landuse": 0, + "water_surface": 1, + "waterways": 21 + }, + "label_counts": { + "vector_label": 18, + "disease_label": 5, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0071_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0071_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..7d5a632ed67c7744b8ab01c646a038e902a8c36d --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0071_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0071_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.91690936428632, + "lat": -0.1833656759287279 + }, + "bbox": [ + 34.894426209000606, + -0.20584871607669616, + 34.93939251957203, + -0.16088263578075965 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0071_label_positive_jitter_packet.png", + "sha256": "9364be417c2f945d73fd272132c951e52fee6469ef01b773e92bf43f170fcd0d", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0071_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0071_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0071_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0071_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0071_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0071_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0071_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 58.3051, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 234668, + "min": 0.0002, + "max": 37.5059, + "mean": 10.4588, + "median": 7.3708, + "p90": 24.6459 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 7, + "urban_landuse": 0, + "water_surface": 1, + "waterways": 49 + }, + "label_counts": { + "vector_label": 99, + "disease_label": 8, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0077_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0077_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..1fe1ddc7c75674033506b1ed5c34d0cafe03339a --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0077_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0077_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.99730633911577, + "lat": -0.2940949974233585 + }, + "bbox": [ + 34.97482300278501, + -0.31657803757132674, + 35.019789675446525, + -0.2716119572753902 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0077_label_positive_jitter_packet.png", + "sha256": "b9bc50df0c8f534c29437eb3936a642f01eb48d3f285a215d8952428ec008850", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0077_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0077_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0077_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0077_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0077_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0077_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0077_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 52.6807, + "repair_attempts": 1 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261422, + "min": 0.0002, + "max": 23.3581, + "mean": 4.4074, + "median": 3.2017, + "p90": 9.904 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 8, + "urban_landuse": 0, + "water_surface": 8, + "waterways": 14 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 1, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0080_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0080_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..4b3aee096a772142e1d74b1f05f59b0fc5a2b40b --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0080_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0080_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.92449509579445, + "lat": -0.11744337011391154 + }, + "bbox": [ + 34.902012008414346, + -0.1399264102618798, + 34.94697818317455, + -0.09496032996594328 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0080_label_positive_jitter_packet.png", + "sha256": "df69f01da54b2ac28af85840ad2353163d3b44e03d9e0269a2a10ec099edc948", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0080_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0080_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0080_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0080_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0080_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0080_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0080_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 54.0437, + "repair_attempts": 2 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 202923, + "min": 0.0002, + "max": 23.2299, + "mean": 3.1314, + "median": 2.1084, + "p90": 7.7222 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 10, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 29 + }, + "label_counts": { + "vector_label": 7, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0081_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0081_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..ffd15f1f63c73c28b730d20658660b3d548c42c5 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0081_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0081_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.968648857179325, + "lat": -0.15580660313854414 + }, + "bbox": [ + 34.946165733902305, + -0.1782896432865124, + 34.991131980456345, + -0.13332356299057588 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0081_label_positive_jitter_packet.png", + "sha256": "6758d2e542cf6cd733f6f21719500388fae8e6a952b4b10a37efad12e4f87a93", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0081_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0081_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0081_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0081_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0081_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0081_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0081_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 53.4072, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 225044, + "min": 0.0001, + "max": 24.5723, + "mean": 6.3699, + "median": 5.1464, + "p90": 15.0119 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 3, + "urban_landuse": 0, + "water_surface": 1, + "waterways": 26 + }, + "label_counts": { + "vector_label": 3, + "disease_label": 4, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0087_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0087_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..b01cf112b959f200c59b80be9d7abec4132a18e4 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0087_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0087_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.81673839082962, + "lat": -0.0659754304252379 + }, + "bbox": [ + 34.79425533577622, + -0.08845847057320616, + 34.83922144588302, + -0.04349239027726964 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0087_label_positive_jitter_packet.png", + "sha256": "4b8351a20be080431a02983203d983b7e80df91010bc90468e4abdf7943d83d4", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0087_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0087_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0087_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0087_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0087_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0087_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0087_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 58.4245, + "repair_attempts": 1 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 235331, + "min": 0.0002, + "max": 58.6801, + "mean": 27.1914, + "median": 26.1444, + "p90": 51.2215 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 16, + "urban_landuse": 16, + "water_surface": 0, + "waterways": 3 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0092_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0092_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..df5ebd83116debb5b2bdc6ffa671e23cdf2420b7 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0092_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0092_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.93779727735864, + "lat": -0.09108409958403174 + }, + "bbox": [ + 34.91531420880106, + -0.113567139732, + 34.960280345916225, + -0.06860105943606348 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0092_label_positive_jitter_packet.png", + "sha256": "7eee6d1154f9f5569a361a4aec6c1c512823b64aab74cf1e96167aebe734c4e7", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0092_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0092_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0092_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0092_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0092_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0092_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0092_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 53.3112, + "repair_attempts": 2 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 186929, + "min": 0.0003, + "max": 29.7138, + "mean": 5.0677, + "median": 2.7027, + "p90": 13.9169 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 2, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 7 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0093_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0093_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..ea5bdd81aa251e8a9f9c3a1f6a318a1f57069036 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0093_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0093_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 35.192333254557916, + "lat": -0.14765793518890669 + }, + "bbox": [ + 35.16985013974882, + -0.17014097533687494, + 35.214816369367014, + -0.12517489504093843 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0093_label_positive_jitter_packet.png", + "sha256": "0b6851328ceb923458c0231ded6717f0dcbbe4226a1aabd2fda4f62749347a44", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0093_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0093_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0093_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0093_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0093_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0093_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0093_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 57.368, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 190207, + "min": 0.0003, + "max": 47.0773, + "mean": 6.7525, + "median": 2.9029, + "p90": 20.2948 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 11, + "urban_landuse": 1, + "water_surface": 0, + "waterways": 4 + }, + "label_counts": { + "vector_label": 3, + "disease_label": 1, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0095_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0095_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..02b4843fa9f10b42d77df27cb2fa41e8907b6151 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0095_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0095_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.93909325569119, + "lat": -0.12992117496001884 + }, + "bbox": [ + 34.91661015774152, + -0.1524042151079871, + 34.96157635364086, + -0.10743813481205058 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0095_label_positive_jitter_packet.png", + "sha256": "848d4dc549791c10a1f5143994f79e85dfc8e9d9a8f4a0c1263153529d93ea1d", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0095_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0095_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0095_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0095_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0095_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0095_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0095_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 54.0191, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 181068, + "min": 0.0001, + "max": 29.6317, + "mean": 3.5941, + "median": 1.9906, + "p90": 8.8285 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 10, + "urban_landuse": 1, + "water_surface": 0, + "waterways": 34 + }, + "label_counts": { + "vector_label": 7, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0098_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0098_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..5e34072ca715d58b80efece0ce662b70b0090f75 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0098_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0098_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.97978253942972, + "lat": -0.23526891004202288 + }, + "bbox": [ + 34.95729930973694, + -0.25775195018999114, + 35.0022657691225, + -0.21278586989405462 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0098_label_positive_jitter_packet.png", + "sha256": "d92d78cb52fb07fdab9be4c06567912f9653aa11c62e692a78cd9172c1abaaa0", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0098_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0098_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0098_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0098_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0098_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0098_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0098_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 60.2332, + "repair_attempts": 1 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261266, + "min": 0.0002, + "max": 17.5667, + "mean": 2.1767, + "median": 1.473, + "p90": 4.8431 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 7, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 9 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0099_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0099_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..c55493b84d89714a1abc74f4775efea4064a4fea --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0099_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0099_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.914976219135795, + "lat": -0.18047131148582504 + }, + "bbox": [ + 34.89249306745623, + -0.2029543516337933, + 34.93745937081536, + -0.15798827133785678 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0099_label_positive_jitter_packet.png", + "sha256": "ce49c60922d30d5c6e67364612d6c79081084f01e2a38d2c624ea981c7d69ee3", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0099_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0099_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0099_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0099_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0099_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0099_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0099_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 58.2055, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 233060, + "min": 0.0002, + "max": 37.5004, + "mean": 10.5156, + "median": 7.8381, + "p90": 24.3993 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 7, + "urban_landuse": 0, + "water_surface": 1, + "waterways": 40 + }, + "label_counts": { + "vector_label": 121, + "disease_label": 6, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0102_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0102_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..da1dd50a8143c26067a88310d466d0c4bd79a184 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0102_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0102_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.920862156868616, + "lat": -0.18189058779063585 + }, + "bbox": [ + 34.89837900342791, + -0.2043736279386041, + 34.94334531030932, + -0.1594075476426676 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0102_label_positive_jitter_packet.png", + "sha256": "68c45b3379f45c05b6a1ac8f9f45de7e4066a882171d538a86aad6439ab175fc", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0102_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0102_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0102_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0102_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0102_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0102_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0102_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 58.5038, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 234923, + "min": 0.0002, + "max": 37.5034, + "mean": 11.1872, + "median": 8.7648, + "p90": 24.7962 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 6, + "urban_landuse": 0, + "water_surface": 1, + "waterways": 50 + }, + "label_counts": { + "vector_label": 121, + "disease_label": 8, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0104_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0104_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..e11cf9a4e6233cb6a1ed88afd2449df2676cdc71 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0104_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0104_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.9147369609575, + "lat": -0.1684119030041917 + }, + "bbox": [ + 34.89225382368545, + -0.19089494315215996, + 34.937220098229545, + -0.14592886285622345 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0104_label_positive_jitter_packet.png", + "sha256": "5d6f89f0e8f541e518df699a81624140b9805a8671dcfeb7beb17407c18f1b64", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0104_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0104_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0104_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0104_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0104_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0104_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0104_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 56.9458, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 226944, + "min": 0.0001, + "max": 37.4983, + "mean": 10.2135, + "median": 7.2022, + "p90": 24.5862 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 8, + "urban_landuse": 0, + "water_surface": 1, + "waterways": 44 + }, + "label_counts": { + "vector_label": 121, + "disease_label": 3, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0105_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0105_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..29b257aa864d6c430443ee6ebe36e50df5b5b0d9 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0105_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0105_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.99672763597018, + "lat": -0.3402244295886193 + }, + "bbox": [ + 34.97424419943727, + -0.3627074697365876, + 35.01921107250309, + -0.31774138944065106 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0105_label_positive_jitter_packet.png", + "sha256": "91b487dc2355a4e34d14946a13a3a1011f09cf2793b4778af0df9f0340603a38", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0105_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0105_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0105_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0105_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0105_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0105_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0105_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 56.2559, + "repair_attempts": 2 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 211135, + "min": 0.0038, + "max": 18.7112, + "mean": 4.6695, + "median": 3.669, + "p90": 9.5293 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 3, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 9 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 1, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0109_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0109_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..6702d1ae171073106af941fc1e308d0ec874e25e --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0109_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0109_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.92689273814908, + "lat": -0.1851589741469965 + }, + "bbox": [ + 34.90440958060027, + -0.20764201429496476, + 34.949375895697884, + -0.16267593399902824 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0109_label_positive_jitter_packet.png", + "sha256": "7a75dfac4361b48090fbf01bf9b5b97e93c569daa838989c3a944faff97cfa61", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0109_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0109_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0109_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0109_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0109_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0109_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0109_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 58.7559, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 244583, + "min": 0.0002, + "max": 37.4984, + "mean": 11.2139, + "median": 8.9916, + "p90": 24.5112 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 7, + "urban_landuse": 0, + "water_surface": 1, + "waterways": 48 + }, + "label_counts": { + "vector_label": 99, + "disease_label": 7, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0110_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0110_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..2d1b9b36c3e7a59cc9a7f065bc8e4352d80affb9 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0110_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0110_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 35.02054223432768, + "lat": -0.3812591475463422 + }, + "bbox": [ + 34.998058696410155, + -0.4037421876943105, + 35.0430257722452, + -0.35877610739837396 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0110_label_positive_jitter_packet.png", + "sha256": "8c9ec390010f008d98108a3958c67d143753fd857eb11445873d7b0e59582493", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0110_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0110_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0110_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0110_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0110_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0110_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0110_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 62.5678, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 1.9216, + "mean": 0.1846, + "median": 0.0, + "p90": 0.7152 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 61367, + "min": 0.3103, + "max": 46.8185, + "mean": 8.5673, + "median": 6.6136, + "p90": 15.3776 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 4, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 22 + }, + "label_counts": { + "vector_label": 2, + "disease_label": 1, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0117_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0117_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..9e148669b45348815d9d76a5a472f621313def78 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0117_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0117_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.7862739136935, + "lat": -0.28540379742677124 + }, + "bbox": [ + 34.76379059461005, + -0.3078868375747395, + 34.80875723277695, + -0.262920757278803 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0117_label_positive_jitter_packet.png", + "sha256": "6cc65b148ab5dd1db59fcf7b9072afc0cef012e40082a50357dc8d94e8e2210b", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0117_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0117_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0117_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0117_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0117_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0117_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0117_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 27.188, + "repair_attempts": 1 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 42388, + "min": 0.0, + "max": 6.0208, + "mean": 1.9568, + "median": 1.6441, + "p90": 4.3564 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 0, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0120_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0120_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..9e4668612c1729af691840e49ccf3cccf052666b --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0120_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0120_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 35.11161547261029, + "lat": -0.011302796301118134 + }, + "bbox": [ + 35.08913243202485, + -0.0337858364490864, + 35.13409851319573, + 0.011180243846850131 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0120_label_positive_jitter_packet.png", + "sha256": "6532f882423c99e65dc48365be834565b54a2bd9097912b2da0128fc20eb0e16", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0120_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0120_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0120_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0120_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0120_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0120_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0120_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 56.4507, + "repair_attempts": 1 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 4.322, + "mean": 0.6952, + "median": 0.2481, + "p90": 2.1516 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 61315, + "min": 0.0004, + "max": 9.6496, + "mean": 2.2547, + "median": 1.7892, + "p90": 4.9739 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 3, + "urban_landuse": 239, + "water_surface": 0, + "waterways": 19 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 4, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0126_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0126_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..099a3fa07282cfc818ccd20b1b0984297c9deee7 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0126_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0126_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.91627038809202, + "lat": -0.18306275764832805 + }, + "bbox": [ + 34.89378723318641, + -0.2055457977962963, + 34.93875354299764, + -0.1605797175003598 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0126_label_positive_jitter_packet.png", + "sha256": "7233e40eb08a708f369149f39445c9b33402286c17b1bbe3526faef33caf0f63", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0126_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0126_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0126_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0126_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0126_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0126_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0126_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 58.2689, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 234756, + "min": 0.0002, + "max": 37.4977, + "mean": 10.4138, + "median": 7.3913, + "p90": 24.5574 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 7, + "urban_landuse": 0, + "water_surface": 1, + "waterways": 47 + }, + "label_counts": { + "vector_label": 99, + "disease_label": 8, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0132_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0132_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..5c5465ff5f632a37eef0d242a84939be85e3cf7b --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0132_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0132_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.91831493033958, + "lat": -0.24580073034718034 + }, + "bbox": [ + 34.89583168329687, + -0.2682837704951486, + 34.940798177382284, + -0.22331769019921208 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0132_label_positive_jitter_packet.png", + "sha256": "3286a59b6b5b975bf8a9c98fa7a4a155ce5adbd782ad978edd0b02d5a9696aaa", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0132_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0132_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0132_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0132_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0132_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0132_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0132_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 54.3831, + "repair_attempts": 1 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 138815, + "min": 0.0002, + "max": 14.3683, + "mean": 1.315, + "median": 1.0331, + "p90": 2.9509 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 0, + "urban_landuse": 5, + "water_surface": 0, + "waterways": 20 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 2, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0134_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0134_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..7389eb4eea1086d38e0ab1c5e11a09c3946db4aa --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0134_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0134_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.85091100406366, + "lat": -0.34067609610988114 + }, + "bbox": [ + 34.82842756647759, + -0.3631591362578494, + 34.87339444164973, + -0.3181930559619129 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0134_label_positive_jitter_packet.png", + "sha256": "e15338057a38cb7b34e35835f1d8dd900b3462f995b3d68251e48e21f7ca2c15", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0134_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0134_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0134_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0134_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0134_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0134_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0134_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 65.1436, + "repair_attempts": 1 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 252194, + "min": 0.0, + "max": 25.4264, + "mean": 6.6354, + "median": 5.3877, + "p90": 14.5131 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 4, + "urban_landuse": 0, + "water_surface": 1, + "waterways": 2 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 3, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0137_hard_negative_water_urban_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0137_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..1ffee0e821a7129c0be5e1eb77958e9861f4a3b7 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0137_hard_negative_water_urban_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0137_hard_negative_water_urban", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.852193849067426, + "lat": -0.1286401698250562 + }, + "bbox": [ + 34.82971075225198, + -0.15112320997302445, + 34.874676945882875, + -0.10615712967708793 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0137_hard_negative_water_urban_packet.png", + "sha256": "729c66ed22cfc207963d05f1e87dce2c6aa202f6c545e67c34141e7744ed809a", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0137_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0137_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0137_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0137_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0137_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0137_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0137_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 51.9668, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 171177, + "min": 0.0002, + "max": 39.4222, + "mean": 8.9624, + "median": 7.2795, + "p90": 20.5056 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 3, + "urban_landuse": 0, + "water_surface": 2, + "waterways": 67 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 1, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0138_hard_negative_water_urban_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0138_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..6c1e35b4b51bb8c2b2b1ad35fca271d4e0a7cf0e --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0138_hard_negative_water_urban_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0138_hard_negative_water_urban", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.788059790297815, + "lat": -0.11705729207959828 + }, + "bbox": [ + 34.765576703227744, + -0.13954033222756654, + 34.81054287736789, + -0.09457425193163002 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0138_hard_negative_water_urban_packet.png", + "sha256": "c37e9940b226a953e44d45c1db297f2686fc528d5f4a9df16a923889d2283bd3", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0138_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0138_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0138_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0138_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0138_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0138_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0138_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 50.4171, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 241831, + "min": 0.0002, + "max": 65.2904, + "mean": 38.2351, + "median": 40.4354, + "p90": 58.6579 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 24, + "major_roads": 33, + "urban_landuse": 13, + "water_surface": 16, + "waterways": 34 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 4, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0142_hard_negative_water_urban_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0142_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..7c07811db97051bf23ff042a5128d33421d3f4a6 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0142_hard_negative_water_urban_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0142_hard_negative_water_urban", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 35.01898882917987, + "lat": -0.004823338699240132 + }, + "bbox": [ + 34.996505788952234, + -0.027306378847208396, + 35.0414718694075, + 0.017659701448728134 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0142_hard_negative_water_urban_packet.png", + "sha256": "d597edd255668dfefa128b2348a26385b1cdf649d283ecd7e49b235cf440940a", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0142_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0142_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0142_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0142_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0142_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0142_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0142_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 56.9893, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 6.4372, + "mean": 2.8792, + "median": 2.8681, + "p90": 5.4248 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 342, + "min": 0.0304, + "max": 1.3243, + "mean": 0.3177, + "median": 0.0305, + "p90": 1.2505 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 0, + "urban_landuse": 202, + "water_surface": 1, + "waterways": 20 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0148_hard_negative_water_urban_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0148_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..a3093a1aa7a05907321ddf555e2ef0fe75f6371f --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0148_hard_negative_water_urban_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0148_hard_negative_water_urban", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 35.153845296752785, + "lat": -0.06485405004215848 + }, + "bbox": [ + 35.131362242201774, + -0.08733709019012675, + 35.176328351303795, + -0.042371009894190216 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0148_hard_negative_water_urban_packet.png", + "sha256": "72fb7a79a812cd792ebfd4d522ab177a44f6a30421bde03801497030970735a4", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0148_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0148_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0148_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0148_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0148_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0148_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0148_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 55.5621, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 164566, + "min": 0.0005, + "max": 32.4944, + "mean": 3.8101, + "median": 2.0417, + "p90": 9.6873 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 8, + "urban_landuse": 62, + "water_surface": 21, + "waterways": 12 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0151_hard_negative_water_urban_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0151_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..8c510388eaecfdd7fa70e804f03d2cef6c85e06e --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0151_hard_negative_water_urban_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0151_hard_negative_water_urban", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.78163774027053, + "lat": -0.11344841575625822 + }, + "bbox": [ + 34.759154656049084, + -0.13593145590422648, + 34.80412082449198, + -0.09096537560828996 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0151_hard_negative_water_urban_packet.png", + "sha256": "a1866fd1157ed05e1db5c1d31f93b5cc36bedd197864b0d3461c0c7ff1feb27c", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0151_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0151_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0151_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0151_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0151_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0151_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0151_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 46.5628, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 242787, + "min": 0.0002, + "max": 65.2773, + "mean": 38.8492, + "median": 39.5301, + "p90": 59.0676 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 39, + "major_roads": 75, + "urban_landuse": 40, + "water_surface": 16, + "waterways": 29 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 7, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0158_hard_negative_water_urban_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0158_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..c2eaec69e447124a30357a398027ce4bfad4bc77 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0158_hard_negative_water_urban_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0158_hard_negative_water_urban", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 35.14036019050604, + "lat": -0.107290551551733 + }, + "bbox": [ + 35.11787711093927, + -0.12977359169970126, + 35.162843270072806, + -0.08480751140376475 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0158_hard_negative_water_urban_packet.png", + "sha256": "4b40b7a0010023a8f910e99e4cedcaf40d65f99ff54d5cc17b1deaf9f7517def", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0158_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0158_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0158_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0158_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0158_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0158_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0158_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 53.6744, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 157139, + "min": 0.0003, + "max": 31.8474, + "mean": 3.4787, + "median": 2.1783, + "p90": 8.3722 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 12, + "urban_landuse": 16, + "water_surface": 8, + "waterways": 6 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 1, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0164_hard_negative_water_urban_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0164_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..cfb0577428656659eba65df30347b51b0addaf46 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0164_hard_negative_water_urban_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0164_hard_negative_water_urban", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.858065016183225, + "lat": -0.14269778035233116 + }, + "bbox": [ + 34.835581906305954, + -0.16518082050029942, + 34.880548126060496, + -0.1202147402043629 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0164_hard_negative_water_urban_packet.png", + "sha256": "8f2c2eb025bbbb3b65a96e746b23a0f24041142c9441386fa62285117d932af3", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0164_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0164_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0164_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0164_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0164_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0164_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0164_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 51.4616, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 189228, + "min": 0.0003, + "max": 31.7123, + "mean": 7.3586, + "median": 6.5407, + "p90": 15.5248 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 1, + "urban_landuse": 3, + "water_surface": 0, + "waterways": 120 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 1, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0168_hard_negative_water_urban_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0168_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..5a3e40e2b527af67584618387d4b6ee683262877 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0168_hard_negative_water_urban_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0168_hard_negative_water_urban", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 35.08656323041363, + "lat": -0.003378038709579119 + }, + "bbox": [ + 35.06408019022659, + -0.025861078857547383, + 35.10904627060067, + 0.019105001438389148 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0168_hard_negative_water_urban_packet.png", + "sha256": "1deb87525299bfad920e64afade9362a6fa0437312b8318edc2d0b7bacc84a75", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0168_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0168_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0168_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0168_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0168_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0168_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0168_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 54.2894, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 7.3529, + "mean": 2.6664, + "median": 2.3797, + "p90": 5.4443 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 14758, + "min": 0.0004, + "max": 7.929, + "mean": 1.7377, + "median": 1.707, + "p90": 3.1275 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 3, + "urban_landuse": 121, + "water_surface": 0, + "waterways": 20 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 4, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0174_hard_negative_water_urban_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0174_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..eeb1a444d3e9b4c4e4ba92cced7bdc8f496a23ca --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0174_hard_negative_water_urban_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0174_hard_negative_water_urban", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 35.12884378160919, + "lat": -0.005501714602244226 + }, + "bbox": [ + 35.10636074135757, + -0.02798475475021249, + 35.15132682186081, + 0.01698132554572404 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0174_hard_negative_water_urban_packet.png", + "sha256": "c447fac3fe1da7e078367c685f5f8115a5f8694e6bce30006207369c5d35ede5", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0174_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0174_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0174_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0174_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0174_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0174_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0174_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 55.1639, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 2.6038, + "mean": 0.2528, + "median": 0.0, + "p90": 0.9767 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 34342, + "min": 0.0024, + "max": 9.7134, + "mean": 2.6762, + "median": 2.0956, + "p90": 5.5922 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 3, + "urban_landuse": 356, + "water_surface": 0, + "waterways": 20 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0177_hard_negative_water_urban_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0177_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..d9b5974d00150e8a6bb31be52da85360c9cc228c --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0177_hard_negative_water_urban_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0177_hard_negative_water_urban", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.963293874092244, + "lat": -0.26417410405013286 + }, + "bbox": [ + 34.94081059496287, + -0.2866571441981011, + 34.98577715322162, + -0.2416910639021646 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0177_hard_negative_water_urban_packet.png", + "sha256": "c990cd6f931b17e6426fc0e1e443e760060a2675851cf9eedf4c6f64f1ed8000", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0177_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0177_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0177_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0177_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0177_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0177_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0177_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 55.3959, + "repair_attempts": 2 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 262119, + "min": 0.0002, + "max": 29.0658, + "mean": 7.0471, + "median": 5.5179, + "p90": 14.8209 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 11, + "urban_landuse": 0, + "water_surface": 5, + "waterways": 9 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0178_hard_negative_water_urban_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0178_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..0de205d99b9993ecaa7a6385f5f5fcf422c191a2 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0178_hard_negative_water_urban_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0178_hard_negative_water_urban", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 35.00556909056689, + "lat": -0.2493793329839413 + }, + "bbox": [ + 34.98308583745594, + -0.2718623731319096, + 35.028052343677835, + -0.22689629283597304 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0178_hard_negative_water_urban_packet.png", + "sha256": "ad953445c33f8ec789b5c93c5b54cc17b9f4f812cad4e8684b65c1c747ea5e26", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0178_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0178_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0178_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0178_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0178_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0178_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0178_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 58.7642, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 262144, + "min": 0.0002, + "max": 19.6439, + "mean": 2.2596, + "median": 1.5545, + "p90": 4.4883 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 4, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 6 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 1, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0184_hard_negative_water_urban_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0184_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..1a58f4c09f0d097980d7ccf3d2e6a37d24fc017e --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0184_hard_negative_water_urban_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0184_hard_negative_water_urban", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.97101808721591, + "lat": -0.2649316255128159 + }, + "bbox": [ + 34.948534806714, + -0.28741466566078416, + 34.99350136771782, + -0.24244858536484765 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0184_hard_negative_water_urban_packet.png", + "sha256": "f13988bde479d841ec5f12f9187dfe18041c325d1a777db8e56e4604b33c2345", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0184_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0184_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0184_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0184_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0184_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0184_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0184_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 55.8777, + "repair_attempts": 1 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 262144, + "min": 0.0002, + "max": 29.0633, + "mean": 6.9738, + "median": 5.4547, + "p90": 14.7704 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 13, + "urban_landuse": 0, + "water_surface": 7, + "waterways": 5 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0188_hard_negative_water_urban_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0188_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..4bff411055ed5f47e6b56da116ba7a8a3c2465a2 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0188_hard_negative_water_urban_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0188_hard_negative_water_urban", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 35.109463119854716, + "lat": -0.07216640930965453 + }, + "bbox": [ + 35.08698006187269, + -0.0946494494576228, + 35.131946177836745, + -0.04968336916168626 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0188_hard_negative_water_urban_packet.png", + "sha256": "58f1c967380f1b9190b385046176c0774bf5561ea9917999fe9f10cd702156e2", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0188_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0188_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0188_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0188_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0188_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0188_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0188_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 52.3304, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 64458, + "min": 0.0003, + "max": 31.3068, + "mean": 3.2515, + "median": 1.1258, + "p90": 10.6308 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 12, + "urban_landuse": 133, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 1, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0194_hard_negative_water_urban_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0194_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..61c1b98ab7b76f9e72e0120604fb89b19fa54ed3 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0194_hard_negative_water_urban_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0194_hard_negative_water_urban", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 35.036221752469565, + "lat": -0.05557463818372582 + }, + "bbox": [ + 35.01373870174531, + -0.07805767833169408, + 35.05870480319382, + -0.033091598035757556 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0194_hard_negative_water_urban_packet.png", + "sha256": "76412c582ebc646dd32dfa5c920f5a10e9a43d7cb4b9b8fd70d1a3b0696c5789", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0194_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0194_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0194_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0194_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0194_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0194_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0194_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 56.2307, + "repair_attempts": 1 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 139568, + "min": 0.0002, + "max": 27.5146, + "mean": 5.9564, + "median": 4.8054, + "p90": 12.1632 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 2, + "urban_landuse": 1, + "water_surface": 2, + "waterways": 0 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 3, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0197_hard_negative_water_urban_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0197_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..7c37e34777346de9d79309fc516923e86628806d --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0197_hard_negative_water_urban_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0197_hard_negative_water_urban", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 35.2111172818609, + "lat": -0.13848610086397312 + }, + "bbox": [ + 35.188634176038974, + -0.16096914101194137, + 35.23360038768283, + -0.11600306071600486 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0197_hard_negative_water_urban_packet.png", + "sha256": "d2e987a65cac386a61c24a46b418aac154b063baf2161964b8d299d81492f6b5", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0197_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0197_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0197_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0197_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0197_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0197_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0197_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 58.2016, + "repair_attempts": 2 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 236439, + "min": 0.0003, + "max": 47.0569, + "mean": 4.299, + "median": 1.8806, + "p90": 8.5315 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 8, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 6 + }, + "label_counts": { + "vector_label": 6, + "disease_label": 1, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0198_hard_negative_water_urban_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0198_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..6a88c21896fb941537ad3adaf7c1d96ec5154786 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0198_hard_negative_water_urban_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0198_hard_negative_water_urban", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.81574077785449, + "lat": -0.16052258958318 + }, + "bbox": [ + 34.793257649468956, + -0.18300562973114826, + 34.83822390624002, + -0.13803954943521174 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0198_hard_negative_water_urban_packet.png", + "sha256": "ef5ec39d511271609115dd67cb63edce6f4cdf6ab11d0ed50fbf47b11258b1dc", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0198_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0198_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0198_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0198_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0198_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0198_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0198_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 56.5519, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 247371, + "min": 0.0005, + "max": 55.4764, + "mean": 12.8233, + "median": 11.3368, + "p90": 23.6709 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 5, + "urban_landuse": 0, + "water_surface": 3, + "waterways": 180 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 1, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0201_hard_negative_water_urban_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0201_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..f3d9e8c003d7836fd2010410946e0543f83d0987 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0201_hard_negative_water_urban_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0201_hard_negative_water_urban", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.953829307693574, + "lat": -0.2930371525724015 + }, + "bbox": [ + 34.93134597348972, + -0.31552019272036974, + 34.97631264189743, + -0.2705541124244332 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0201_hard_negative_water_urban_packet.png", + "sha256": "dd3622b8ace057e931c9ea4d22eab5451514755258222502cc18c7b05d2c0e0d", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0201_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0201_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0201_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0201_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0201_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0201_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0201_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 53.5807, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 257510, + "min": 0.0002, + "max": 29.0757, + "mean": 5.9274, + "median": 3.9662, + "p90": 14.1671 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 7, + "urban_landuse": 0, + "water_surface": 6, + "waterways": 17 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0208_hard_negative_water_urban_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0208_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..b4e10283ce179f8e0f6b30e0bf31ce66e1f6debd --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0208_hard_negative_water_urban_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0208_hard_negative_water_urban", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 35.157283095614865, + "lat": -0.16641557010761907 + }, + "bbox": [ + 35.134799960631774, + -0.18889861025558732, + 35.179766230597956, + -0.1439325299596508 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0208_hard_negative_water_urban_packet.png", + "sha256": "b6b4c1b64edf8f18e5b44018b60411131895d214e4546280246bf874313fcbbc", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0208_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0208_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0208_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0208_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0208_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0208_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0208_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 58.0104, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 40532, + "min": 0.0003, + "max": 28.2184, + "mean": 3.4415, + "median": 1.73, + "p90": 9.3151 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 2, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 7 + }, + "label_counts": { + "vector_label": 3, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0212_hard_negative_water_urban_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0212_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..71e82407c91d94d3b81f7b64e3699db7e8076787 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0212_hard_negative_water_urban_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0212_hard_negative_water_urban", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 35.147295849018334, + "lat": -0.019506619002834548 + }, + "bbox": [ + 35.124812807567366, + -0.04198965915080281, + 35.1697788904693, + 0.0029764211451337175 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0212_hard_negative_water_urban_packet.png", + "sha256": "ffa1bd7c90050245deaab314f3c264f9d7aef96db174a460943bbf375403f934", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0212_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0212_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0212_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0212_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0212_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0212_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0212_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 59.4294, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0137, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 36953, + "min": 0.0005, + "max": 9.4915, + "mean": 1.9337, + "median": 1.5581, + "p90": 4.1494 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 1, + "urban_landuse": 226, + "water_surface": 0, + "waterways": 19 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0218_hard_negative_water_urban_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0218_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..995bfc73616aa8271e76c7691f1d6e393cb8ab93 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0218_hard_negative_water_urban_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0218_hard_negative_water_urban", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 35.138158955686905, + "lat": 0.003387831159998561 + }, + "bbox": [ + 35.11567591549964, + -0.019095208987969705, + 35.16064199587417, + 0.025870871307966826 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0218_hard_negative_water_urban_packet.png", + "sha256": "d213efef6057f92821e63584a1e16e7ae112a52ed83968050bb44135a200f7ba", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0218_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0218_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0218_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0218_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0218_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0218_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0218_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 49.7843, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 1.6203, + "mean": 0.0923, + "median": 0.0, + "p90": 0.3712 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 4556, + "min": 0.0057, + "max": 6.7064, + "mean": 3.4594, + "median": 3.7737, + "p90": 5.2267 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 1, + "urban_landuse": 368, + "water_surface": 0, + "waterways": 28 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0224_hard_negative_water_urban_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0224_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..b8a25d493d80c1a698446d478da22bd035f3622e --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0224_hard_negative_water_urban_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0224_hard_negative_water_urban", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 35.19970146585284, + "lat": -0.06954495482945823 + }, + "bbox": [ + 35.17721840914293, + -0.0920279949774265, + 35.22218452256275, + -0.047061914681489965 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0224_hard_negative_water_urban_packet.png", + "sha256": "867b28d3a81f0cbbfb91ac947c526b1bd2aa1c6e24de51a31a9d2ccd2d76741a", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0224_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0224_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0224_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0224_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0224_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0224_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0224_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 57.6838, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 225350, + "min": 0.0005, + "max": 23.8306, + "mean": 3.039, + "median": 2.0727, + "p90": 7.0719 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 4, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 24 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 1, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0227_hard_negative_water_urban_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0227_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..54b4c9f599a9e403ea6611b31148143cffb45d75 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0227_hard_negative_water_urban_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0227_hard_negative_water_urban", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.788740677285425, + "lat": -0.01135102882841138 + }, + "bbox": [ + 34.76625763669624, + -0.033834068976379646, + 34.81122371787461, + 0.011132011319556885 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0227_hard_negative_water_urban_packet.png", + "sha256": "8f89862c5ad8f092703462263c153114fce0a0e1a54e31950b8bcb0e351217cc", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0227_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0227_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0227_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0227_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0227_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0227_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0227_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 47.5757, + "repair_attempts": 1 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 163676, + "min": 0.0022, + "max": 38.596, + "mean": 13.1356, + "median": 11.6475, + "p90": 26.6701 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 8, + "urban_landuse": 0, + "water_surface": 1, + "waterways": 8 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0228_hard_negative_water_urban_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0228_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..1d63c6e37f0298c9e6452430787597b54f209159 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0228_hard_negative_water_urban_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0228_hard_negative_water_urban", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 35.158960359705524, + "lat": -0.022680435772998657 + }, + "bbox": [ + 35.13647731779606, + -0.04516347592096692, + 35.18144340161499, + -0.00019739562503039154 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0228_hard_negative_water_urban_packet.png", + "sha256": "9784b99a1e757c20b556940c6b9b7c4406f417175b13ae455d152d09bc46b9ab", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0228_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0228_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0228_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0228_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0228_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0228_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0228_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 59.81, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 58272, + "min": 0.0007, + "max": 12.5894, + "mean": 2.2949, + "median": 1.8553, + "p90": 4.5359 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 5, + "urban_landuse": 191, + "water_surface": 2, + "waterways": 14 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0234_hard_negative_water_urban_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0234_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..163488faa012c26c18e5efcb0492869815032d0f --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0234_hard_negative_water_urban_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0234_hard_negative_water_urban", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 35.16139152296233, + "lat": -0.017612302569431235 + }, + "bbox": [ + 35.13890848175215, + -0.0400953427173995, + 35.18387456417251, + 0.004870737578537031 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0234_hard_negative_water_urban_packet.png", + "sha256": "4a7fe3d04931f78c873f599a16a5a9c866714e28d1466fdfb36fea16709d4c64", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0234_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0234_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0234_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0234_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0234_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0234_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0234_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 58.9095, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 40570, + "min": 0.0006, + "max": 12.5979, + "mean": 2.4895, + "median": 1.8385, + "p90": 5.4186 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 4, + "urban_landuse": 225, + "water_surface": 2, + "waterways": 16 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0238_hard_negative_water_urban_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0238_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..2e200869a791275344970d893641726260a240b1 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0238_hard_negative_water_urban_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0238_hard_negative_water_urban", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.88913604885956, + "lat": -0.1619834341389978 + }, + "bbox": [ + 34.866652918860694, + -0.18446647428696605, + 34.91161917885843, + -0.13950039399102954 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0238_hard_negative_water_urban_packet.png", + "sha256": "49cdfe286de11d8951f672ccdec2630f1ec6f12b95c72488bc5fe2f5967df7cd", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0238_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0238_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0238_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0238_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0238_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0238_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0238_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 52.8218, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 246332, + "min": 0.0003, + "max": 30.5104, + "mean": 7.5122, + "median": 6.2204, + "p90": 16.2956 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 2, + "urban_landuse": 1, + "water_surface": 0, + "waterways": 61 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 1, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0241_hard_negative_water_urban_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0241_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..f93455f01111622a34018c45c7be692a5980816f --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0241_hard_negative_water_urban_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0241_hard_negative_water_urban", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 35.04612588661526, + "lat": -0.14057361183881822 + }, + "bbox": [ + 35.02364277879849, + -0.16305665198678648, + 35.068608994432026, + -0.11809057169084997 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0241_hard_negative_water_urban_packet.png", + "sha256": "aabffd86fb3a4ba10d5eb968c3c71c829c546423ccb0ff63106294cb683f8d40", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0241_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0241_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0241_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0241_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0241_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0241_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0241_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 49.5231, + "repair_attempts": 1 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 244740, + "min": 0.0001, + "max": 23.997, + "mean": 3.7391, + "median": 2.3939, + "p90": 9.2821 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 2, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 3 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0242_hard_negative_water_urban_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0242_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..59e2e372ebb9a9aff6b8563bca508eb9221f9c9b --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0242_hard_negative_water_urban_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0242_hard_negative_water_urban", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 35.14058378424158, + "lat": -0.0717840191810149 + }, + "bbox": [ + 35.11810072644804, + -0.09426705932898316, + 35.163066842035114, + -0.04930097903304664 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0242_hard_negative_water_urban_packet.png", + "sha256": "d2bb0e900bffa171622c041be84aeb5816f33ed4d3486973c2b1b83c9c993cb7", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0242_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0242_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0242_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0242_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0242_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0242_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0242_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 53.937, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 156845, + "min": 0.0003, + "max": 32.5051, + "mean": 4.6085, + "median": 2.285, + "p90": 12.2835 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 18, + "urban_landuse": 128, + "water_surface": 25, + "waterways": 9 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 1, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0244_hard_negative_water_urban_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0244_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..2f4b16f24c3146c3a6705b3df6c912e2c84880e4 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0244_hard_negative_water_urban_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0244_hard_negative_water_urban", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.8238965194819, + "lat": -0.1688079899409778 + }, + "bbox": [ + 34.80141338175246, + -0.19129103008894605, + 34.84637965721134, + -0.14632494979300953 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0244_hard_negative_water_urban_packet.png", + "sha256": "9a9fcfcbd0727a04cf0c8b878b7bcde7453e47462959d254a4f042d5bb757888", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0244_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0244_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0244_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0244_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0244_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0244_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0244_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 55.6329, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 229901, + "min": 0.0002, + "max": 39.8592, + "mean": 10.8683, + "median": 10.3904, + "p90": 20.8196 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 4, + "urban_landuse": 3, + "water_surface": 4, + "waterways": 163 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0247_hard_negative_water_urban_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0247_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..f40cd200e0e6c8aea4ee18e08ebba50ea92e7a49 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0247_hard_negative_water_urban_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0247_hard_negative_water_urban", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 35.182190029750885, + "lat": -0.09583834088377488 + }, + "bbox": [ + 35.15970695815015, + -0.11832138103174314, + 35.20467310135162, + -0.07335530073580662 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0247_hard_negative_water_urban_packet.png", + "sha256": "e518d2eba53b1e95644fee7b0f679cd683c44d8721e6ea3d8d2f071401be7d45", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0247_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0247_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0247_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0247_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0247_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0247_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0247_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 56.0599, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 212788, + "min": 0.0005, + "max": 23.9124, + "mean": 2.5979, + "median": 1.6943, + "p90": 6.3741 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 1, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 12 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 1, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0252_exposure_context_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0252_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..2460cb583c84a0a60e4e6ddc01484b64fe6c8ce4 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0252_exposure_context_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0252_exposure_context", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 35.03233836833802, + "lat": -0.2897843891080172 + }, + "bbox": [ + 35.00985504062614, + -0.31226742925598544, + 35.05482169604989, + -0.2673013489600489 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0252_exposure_context_packet.png", + "sha256": "f5fad9e4773c5057be6de2656901a004479d8aa900316fd273fae2b0aa4ba196", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0252_exposure_context", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0252_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0252_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0252_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0252_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0252_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0252_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 54.5671, + "repair_attempts": 1 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 230437, + "min": 0.0002, + "max": 17.0663, + "mean": 2.8338, + "median": 1.917, + "p90": 6.3289 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 9, + "urban_landuse": 1, + "water_surface": 0, + "waterways": 8 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0254_exposure_context_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0254_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..6803c4277d5e1d8c17ae1540158149bf692e5592 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0254_exposure_context_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0254_exposure_context", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 35.32973450955388, + "lat": -0.24317662432699208 + }, + "bbox": [ + 35.30725126690514, + -0.26565966447496037, + 35.35221775220262, + -0.22069358417902382 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0254_exposure_context_packet.png", + "sha256": "ebfb8670e66ac587b3a5950f41daf36ae813f5df306e1a2a5c59944c255b2aeb", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0254_exposure_context", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0254_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0254_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0254_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0254_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0254_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0254_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 61.4559, + "repair_attempts": 1 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 85647, + "min": 0.0004, + "max": 9.6638, + "mean": 1.3118, + "median": 1.1576, + "p90": 2.5771 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 0, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 3 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 1, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0255_exposure_context_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0255_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..dc5983366aba7a9c51543ed037d14284536dc04b --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0255_exposure_context_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0255_exposure_context", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.82919498632596, + "lat": -0.22192180124035596 + }, + "bbox": [ + 34.806711777529515, + -0.24440484138832422, + 34.8516781951224, + -0.1994387610923877 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0255_exposure_context_packet.png", + "sha256": "ec811e701365706d2d82b39a5416cb13ec67eadd701a5e9ef4e9ca9260aaa55e", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0255_exposure_context", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0255_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0255_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0255_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0255_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0255_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0255_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 57.436, + "repair_attempts": 1 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 162717, + "min": 0.0, + "max": 22.3682, + "mean": 6.5506, + "median": 4.9634, + "p90": 15.6179 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 1, + "urban_landuse": 1, + "water_surface": 1, + "waterways": 8 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0261_exposure_context_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0261_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..ec2439c38cb64574f030c6b4b1cb47d0605eac07 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0261_exposure_context_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0261_exposure_context", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 35.01726888495295, + "lat": -0.26122041382743 + }, + "bbox": [ + 34.99478561113777, + -0.28370345397539826, + 35.039752158768124, + -0.23873737367946174 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0261_exposure_context_packet.png", + "sha256": "a50665e886d74203ad111cabc2f9f066a0175cd6f1beda3c70470ea56e586451", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0261_exposure_context", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0261_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0261_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0261_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0261_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0261_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0261_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 57.1499, + "repair_attempts": 1 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 262054, + "min": 0.0025, + "max": 19.599, + "mean": 2.1238, + "median": 1.4834, + "p90": 4.0566 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 1, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 6 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 1, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0266_exposure_context_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0266_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..1dbdb87d613c49407d1ceaa02a205e9b3cffdd6e --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0266_exposure_context_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0266_exposure_context", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.98489756016619, + "lat": -0.1090988812988738 + }, + "bbox": [ + 34.96241447925946, + -0.13158192144684205, + 35.00738064107292, + -0.08661584115090554 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0266_exposure_context_packet.png", + "sha256": "97d2f1245b5b00572c78f6d0528016880ec9f316d361fd823b130c7cbc4a5295", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0266_exposure_context", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0266_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0266_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0266_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0266_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0266_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0266_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 53.1464, + "repair_attempts": 2 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 232511, + "min": 0.0002, + "max": 26.443, + "mean": 5.7323, + "median": 4.0607, + "p90": 13.337 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 2, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 32 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0269_exposure_context_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0269_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..9c240717ff48353675f3a5b5a17d9073598b628f --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0269_exposure_context_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0269_exposure_context", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.82708114450629, + "lat": -0.15998450496953376 + }, + "bbox": [ + 34.804598016711324, + -0.18246754511750202, + 34.84956427230125, + -0.1375014648215655 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0269_exposure_context_packet.png", + "sha256": "382321b753da9290ee0f1d07f742d0e13372df6eb3b182694f7d95bc932b5550", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0269_exposure_context", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0269_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0269_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0269_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0269_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0269_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0269_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 57.1833, + "repair_attempts": 1 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 247649, + "min": 0.0006, + "max": 55.1506, + "mean": 11.6078, + "median": 10.3619, + "p90": 21.7796 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 4, + "urban_landuse": 3, + "water_surface": 1, + "waterways": 191 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0270_exposure_context_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0270_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..96063088c3680b601040efee812e9bc6a04360f8 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0270_exposure_context_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0270_exposure_context", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.78637540574461, + "lat": -0.10516935562243784 + }, + "bbox": [ + 34.7638923277211, + -0.1276523957704061, + 34.80885848376811, + -0.08268631547446958 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0270_exposure_context_packet.png", + "sha256": "ec06b70aa9aa254521838c15f5bc5ee87116cf7e4b425e7bbbdcefc348336230", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0270_exposure_context", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0270_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0270_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0270_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0270_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0270_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0270_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 50.1974, + "repair_attempts": 2 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 257888, + "min": 0.0002, + "max": 68.4552, + "mean": 42.1732, + "median": 44.6005, + "p90": 59.3448 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 71, + "major_roads": 81, + "urban_landuse": 41, + "water_surface": 16, + "waterways": 25 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 7, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0271_exposure_context_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0271_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..25c693e159cf0c4960f42a23c0639857e7d73150 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0271_exposure_context_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0271_exposure_context", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.94157160753409, + "lat": -0.3976135624974427 + }, + "bbox": [ + 34.91908802599532, + -0.42009660264541093, + 34.96405518907285, + -0.3751305223494744 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0271_exposure_context_packet.png", + "sha256": "3583e8b8e786e8ffd1f0e92827e90ff1a0e8bd870ac1d02b871a988161d092d4", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0271_exposure_context", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0271_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0271_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0271_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0271_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0271_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0271_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 58.0326, + "repair_attempts": 2 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 4.3745, + "mean": 0.9545, + "median": 0.6377, + "p90": 2.4588 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 218494, + "min": 0.0003, + "max": 21.7488, + "mean": 4.4169, + "median": 3.4371, + "p90": 9.3904 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 2, + "major_roads": 3, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 1, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0277_exposure_context_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0277_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..10d8ef985d9a76f3d68310afd1b3bc78da01ee3c --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0277_exposure_context_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0277_exposure_context", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 35.12496550267423, + "lat": -0.03921857026067588 + }, + "bbox": [ + 35.102482457259256, + -0.06170161040864414, + 35.1474485480892, + -0.016735530112707613 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0277_exposure_context_packet.png", + "sha256": "49406da0e80a3eba5272cd35e570f07ac67596dab7fccfee64acbceb5e60b5b8", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0277_exposure_context", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0277_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0277_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0277_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0277_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0277_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0277_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 56.6575, + "repair_attempts": 1 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.6169, + "mean": 0.0143, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 116223, + "min": 0.0004, + "max": 12.662, + "mean": 1.8219, + "median": 1.414, + "p90": 4.1995 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 1, + "urban_landuse": 2, + "water_surface": 0, + "waterways": 9 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0278_exposure_context_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0278_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..cc90cf169db2a6c2d41a775cd458a9c37c3a7bed --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0278_exposure_context_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0278_exposure_context", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 35.060135578271236, + "lat": -0.13774642444736696 + }, + "bbox": [ + 35.03765247314899, + -0.1602294645953352, + 35.082618683393484, + -0.1152633842993987 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0278_exposure_context_packet.png", + "sha256": "7f7e4dda46fb56c23db9629656e815bd23a507f7eff9103363f7c6f6a057d0b9", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0278_exposure_context", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0278_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0278_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0278_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0278_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0278_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0278_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 50.6623, + "repair_attempts": 2 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 245067, + "min": 0.0002, + "max": 39.8186, + "mean": 5.5523, + "median": 3.309, + "p90": 13.5046 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 0, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 3 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0283_exposure_context_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0283_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..f47f2614e9b39f4b149e29db2319c4e2b6ee7150 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0283_exposure_context_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0283_exposure_context", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.94096058560656, + "lat": -0.400365802826313 + }, + "bbox": [ + 34.9184769965468, + -0.42284884297428127, + 34.96344417466632, + -0.37788276267834475 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0283_exposure_context_packet.png", + "sha256": "d6b7ee2e1e590eb8450b2890455ffbbafcd3e3e77af26adc40abd22da1cc5e0d", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0283_exposure_context", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0283_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0283_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0283_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0283_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0283_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0283_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 57.8321, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 4.5691, + "mean": 1.0374, + "median": 0.7253, + "p90": 2.607 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 201585, + "min": 0.0003, + "max": 21.7187, + "mean": 4.5172, + "median": 3.4951, + "p90": 9.6197 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 2, + "major_roads": 2, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 1, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0284_exposure_context_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0284_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..bc0a4f58c9c6c01bf45a84c1563a7399a4153746 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0284_exposure_context_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0284_exposure_context", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.77784247622345, + "lat": -0.09943368752864261 + }, + "bbox": [ + 34.75535940221856, + -0.12191672767661088, + 34.80032555022834, + -0.07695064738067434 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0284_exposure_context_packet.png", + "sha256": "cfe4f1ba679bfadb6cc1d87f544c815281c4cd8f035ed2fefc45a86d64af779f", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0284_exposure_context", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0284_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0284_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0284_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0284_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0284_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0284_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 43.3886, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261902, + "min": 0.0002, + "max": 68.4531, + "mean": 41.7012, + "median": 38.372, + "p90": 59.8895 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 101, + "major_roads": 175, + "urban_landuse": 94, + "water_surface": 12, + "waterways": 32 + }, + "label_counts": { + "vector_label": 2, + "disease_label": 8, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0285_exposure_context_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0285_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..ccfc9a49d96c641bb2434c7cbcb1ac48e82e2eed --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0285_exposure_context_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0285_exposure_context", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 35.111158845362056, + "lat": -0.024640950762677527 + }, + "bbox": [ + 35.0886758031349, + -0.04712399091064579, + 35.133641887589214, + -0.0021579106147092617 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0285_exposure_context_packet.png", + "sha256": "a450671a6ffd35ef383fc3d0eff8f0c46689508a93a96302412f2767badb30bf", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0285_exposure_context", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0285_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0285_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0285_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0285_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0285_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0285_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 58.2659, + "repair_attempts": 1 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 2.7615, + "mean": 0.2842, + "median": 0.0, + "p90": 1.0779 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 112979, + "min": 0.0004, + "max": 9.6802, + "mean": 2.0098, + "median": 1.7094, + "p90": 4.2938 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 3, + "urban_landuse": 85, + "water_surface": 0, + "waterways": 16 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 4, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0295_exposure_context_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0295_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..8f3094c6404daa4dafedd982647ed878e0eaa0a0 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0295_exposure_context_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0295_exposure_context", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.93439639904992, + "lat": -0.3892828042412225 + }, + "bbox": [ + 34.91191283996026, + -0.4117658443891908, + 34.95687995813959, + -0.36679976409325427 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0295_exposure_context_packet.png", + "sha256": "4b7452910549291d0da47c2dae7fd2bd92d0881f702077c651a8ac81b8cc713d", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0295_exposure_context", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0295_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0295_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0295_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0295_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0295_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0295_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 59.2142, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 2.9097, + "mean": 0.4227, + "median": 0.0893, + "p90": 1.3813 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 238387, + "min": 0.0002, + "max": 21.8074, + "mean": 3.8398, + "median": 2.9809, + "p90": 8.0281 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 2, + "major_roads": 6, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0302_exposure_context_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0302_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..e3e05fbeacc978028c15971209ab8f7fcdec9a9c --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0302_exposure_context_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0302_exposure_context", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.80521664284182, + "lat": -0.06452758493571462 + }, + "bbox": [ + 34.78273358843545, + -0.08701062508368287, + 34.82769969724819, + -0.04204454478774635 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0302_exposure_context_packet.png", + "sha256": "34d58a51ece8cc706c59541755d34d59abe4824e3f2a06cc9fcd05c7e54cb141", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0302_exposure_context", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0302_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0302_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0302_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0302_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0302_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0302_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 56.6198, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 252511, + "min": 0.0002, + "max": 65.2648, + "mean": 33.5401, + "median": 36.0504, + "p90": 53.9504 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 12, + "major_roads": 46, + "urban_landuse": 27, + "water_surface": 0, + "waterways": 5 + }, + "label_counts": { + "vector_label": 2, + "disease_label": 1, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0304_exposure_context_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0304_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..84048c6f58266f9947b2027514feaf11aa8e3a19 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0304_exposure_context_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0304_exposure_context", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.77828304548445, + "lat": -0.0842354628167869 + }, + "bbox": [ + 34.75579998103851, + -0.10671850296475516, + 34.80076610993039, + -0.061752422668818634 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0304_exposure_context_packet.png", + "sha256": "1238206db4342688be7b92e479dce4290297c1b7d86ede8b0de0470b3d4a4bd1", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0304_exposure_context", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0304_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0304_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0304_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0304_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0304_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0304_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 44.4235, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 262144, + "min": 0.0007, + "max": 68.4529, + "mean": 34.009, + "median": 33.5792, + "p90": 57.3455 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 91, + "major_roads": 194, + "urban_landuse": 108, + "water_surface": 2, + "waterways": 20 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 7, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0314_random_ecological_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0314_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..1928c6af2f4ba37cb677a71d370e07373fcc56f5 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0314_random_ecological_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0314_random_ecological", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.94979974274395, + "lat": -0.40236655310066083 + }, + "bbox": [ + 34.927316148184204, + -0.4248495932486291, + 34.97228333730369, + -0.37988351295269257 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0314_random_ecological_packet.png", + "sha256": "5560461db3e85ee1beeb54368eddc68dd1f7a464d0a9606bdfc977ccccf1b240", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0314_random_ecological", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0314_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0314_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0314_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0314_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0314_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0314_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 56.9119, + "repair_attempts": 1 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0289, + "max": 5.8561, + "mean": 1.6891, + "median": 1.3615, + "p90": 3.611 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 201399, + "min": 0.0012, + "max": 21.8752, + "mean": 5.0468, + "median": 4.0834, + "p90": 10.2052 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 2, + "major_roads": 2, + "urban_landuse": 0, + "water_surface": 1, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0318_random_ecological_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0318_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..1a8a942ac3e6fe03edb524d5929aa209ccbeb617 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0318_random_ecological_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0318_random_ecological", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.95963184378563, + "lat": -0.21499462963578653 + }, + "bbox": [ + 34.93714864535347, + -0.23747766978375479, + 34.98211504221779, + -0.19251158948781827 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0318_random_ecological_packet.png", + "sha256": "a1c0d5764ef396c6b8e8b2d12cf176081a674e4db81faa814814c697a5620451", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0318_random_ecological", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0318_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0318_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0318_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0318_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0318_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0318_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 58.1816, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 233911, + "min": 0.0002, + "max": 19.6293, + "mean": 2.1505, + "median": 1.3511, + "p90": 4.7384 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 5, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 11 + }, + "label_counts": { + "vector_label": 2, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0323_random_ecological_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0323_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..b9dd77e32d100f4dd997011b0684afa43c4be0d3 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0323_random_ecological_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0323_random_ecological", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 35.05431323370285, + "lat": -0.05570816497776232 + }, + "bbox": [ + 35.03183018292771, + -0.07819120512573058, + 35.076796284477986, + -0.033225124829794055 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0323_random_ecological_packet.png", + "sha256": "47a2a96b79b9047ea6719f256f8c498bd701de831d11950eb54060bfd6957945", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0323_random_ecological", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0323_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0323_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0323_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0323_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0323_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0323_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 56.1259, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 102105, + "min": 0.0002, + "max": 27.4784, + "mean": 5.0722, + "median": 3.4563, + "p90": 11.5039 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 4, + "urban_landuse": 4, + "water_surface": 0, + "waterways": 2 + }, + "label_counts": { + "vector_label": 1, + "disease_label": 4, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0324_random_ecological_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0324_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..02def0d795cc58b5cbe95b35cec428103f57ea6f --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0324_random_ecological_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0324_random_ecological", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.87967871317198, + "lat": -0.301650970502781 + }, + "bbox": [ + 34.85719536142631, + -0.32413401065074926, + 34.90216206491765, + -0.27916793035481274 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0324_random_ecological_packet.png", + "sha256": "c8c406dd9c7c697de5628fb884c24752868e3400dab2505af4561205d24f1a6f", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0324_random_ecological", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0324_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0324_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0324_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0324_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0324_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0324_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 61.1242, + "repair_attempts": 1 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 133533, + "min": 0.0001, + "max": 19.2536, + "mean": 4.8634, + "median": 4.0029, + "p90": 10.6825 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 1, + "urban_landuse": 0, + "water_surface": 7, + "waterways": 5 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0325_random_ecological_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0325_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..5737525b84d0198cb81fa6f20c6cc7d72d49159e --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0325_random_ecological_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0325_random_ecological", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.81922937648322, + "lat": -0.31434924638159656 + }, + "bbox": [ + 34.79674599795106, + -0.3368322865295648, + 34.84171275501539, + -0.2918662062336283 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0325_random_ecological_packet.png", + "sha256": "e885c845e8a9ef2741af6fe5baa5ccc7f8b36d6282bf5dcbac355dbf48d21eef", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0325_random_ecological", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0325_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0325_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0325_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0325_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0325_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0325_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 50.7981, + "repair_attempts": 1 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 98835, + "min": 0.0, + "max": 22.5208, + "mean": 5.7325, + "median": 4.7251, + "p90": 12.9233 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 7, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0329_random_ecological_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0329_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..94a1ca6cfa1f99411234457c850866ece702387c --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0329_random_ecological_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0329_random_ecological", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.86554259182402, + "lat": -0.3899083729397699 + }, + "bbox": [ + 34.843059031065124, + -0.41239141308773813, + 34.88802615258291, + -0.3674253327918016 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0329_random_ecological_packet.png", + "sha256": "007982b342d8b1a5a4aec67a99c0a770d3523e331ecc4118f4011d65a8e3f317", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0329_random_ecological", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0329_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0329_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0329_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0329_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0329_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0329_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 62.4721, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 2.1129, + "mean": 0.3128, + "median": 0.0749, + "p90": 1.0123 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 165755, + "min": 0.0001, + "max": 16.297, + "mean": 1.6769, + "median": 1.2569, + "p90": 3.4211 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 6, + "urban_landuse": 2, + "water_surface": 4, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 2, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0330_random_ecological_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0330_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..4e8f9ea34ce7cd1e425e1db0f018ebce856991a2 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0330_random_ecological_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0330_random_ecological", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 35.02573041437857, + "lat": -0.17967928912336406 + }, + "bbox": [ + 35.0032472636758, + -0.20216232927133232, + 35.04821356508134, + -0.1571962489753958 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0330_random_ecological_packet.png", + "sha256": "f4ed292ca08a9fb6fad5447f575f0f9c5ed68f7cdd1eb3169fbf02eb62ed3ec3", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0330_random_ecological", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0330_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0330_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0330_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0330_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0330_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0330_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 53.0271, + "repair_attempts": 1 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 252501, + "min": 0.0002, + "max": 20.2156, + "mean": 1.7574, + "median": 1.4538, + "p90": 3.4522 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 5, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 1 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 2, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0331_random_ecological_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0331_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..cb5198e651ca544f40bcbe2a1509f5b42e20fa15 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0331_random_ecological_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0331_random_ecological", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.805956792846374, + "lat": -0.09466873778542989 + }, + "bbox": [ + 34.78347372200865, + -0.11715177793339815, + 34.828439863684096, + -0.07218569763746163 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0331_random_ecological_packet.png", + "sha256": "92d7e8f5bad8ec2499cbd1a1107593d7edc549dcd9ef985de90216be5d24fe87", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0331_random_ecological", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0331_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0331_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0331_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0331_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0331_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0331_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 55.8844, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 262144, + "min": 0.0307, + "max": 65.2115, + "mean": 35.4, + "median": 36.7889, + "p90": 56.6331 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 20, + "major_roads": 27, + "urban_landuse": 15, + "water_surface": 0, + "waterways": 13 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 2, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0336_random_ecological_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0336_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..f4e1bb7fef52c1bba8413789742ab1db59481d94 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0336_random_ecological_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0336_random_ecological", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.94452097693103, + "lat": -0.22068471475010554 + }, + "bbox": [ + 34.922037770009595, + -0.2431677548980738, + 34.96700418385247, + -0.19820167460213728 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0336_random_ecological_packet.png", + "sha256": "bde13f0bbdc71f28053cd77bc8b09075908aeeced884df05400a658892b0c5ce", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0336_random_ecological", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0336_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0336_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0336_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0336_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0336_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0336_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 57.3272, + "repair_attempts": 2 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 220102, + "min": 0.0002, + "max": 19.6052, + "mean": 2.3929, + "median": 1.172, + "p90": 6.5307 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 3, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 8 + }, + "label_counts": { + "vector_label": 2, + "disease_label": 2, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0337_random_ecological_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0337_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..41271eff3a693e4724ec9c3686c8573de3f2da68 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0337_random_ecological_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0337_random_ecological", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 35.094917754255114, + "lat": -0.059025680818583504 + }, + "bbox": [ + 35.07243470217655, + -0.08150872096655176, + 35.11740080633368, + -0.03654264067061524 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0337_random_ecological_packet.png", + "sha256": "b016d8988716056bdc5d45a5c2692a29beb202630053ad03ada0798934841e0b", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0337_random_ecological", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0337_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0337_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0337_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0337_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0337_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0337_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 54.2807, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 71153, + "min": 0.0003, + "max": 7.8198, + "mean": 1.1877, + "median": 0.985, + "p90": 2.4754 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 3, + "urban_landuse": 66, + "water_surface": 0, + "waterways": 13 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0342_random_ecological_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0342_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..ebdc3db97c4a8efdc54642a5e23cd34610e8c7d7 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0342_random_ecological_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0342_random_ecological", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.81679553371549, + "lat": -0.3137364923383482 + }, + "bbox": [ + 34.79431215650127, + -0.3362195324863165, + 34.839278910929714, + -0.29125345219037996 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0342_random_ecological_packet.png", + "sha256": "99922459c3e71a1bbdc5849af60366d91975cf3d87e7596e86469ab7a757dd58", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0342_random_ecological", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0342_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0342_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0342_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0342_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0342_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0342_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 50.4246, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 100577, + "min": 0.0, + "max": 22.5093, + "mean": 5.6202, + "median": 4.4032, + "p90": 13.1539 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 7, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0344_random_ecological_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0344_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..17b152c6250e2c1e48811dc228c1195d80462184 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0344_random_ecological_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0344_random_ecological", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 35.029262049575784, + "lat": -0.12691470525070087 + }, + "bbox": [ + 35.00677895427032, + -0.14939774539866912, + 35.05174514488125, + -0.10443166510273261 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0344_random_ecological_packet.png", + "sha256": "048b327e9c1fed897b76832c34006edf9b6a5ea376fea20fa64f270cf3049c1b", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0344_random_ecological", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0344_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0344_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0344_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0344_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0344_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0344_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 51.3161, + "repair_attempts": 1 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 248105, + "min": 0.0001, + "max": 23.8436, + "mean": 3.6749, + "median": 2.1967, + "p90": 8.908 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 0, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 4 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0348_random_ecological_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0348_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..1c999923920c061a0b3892d3da8070df694b2646 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0348_random_ecological_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0348_random_ecological", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.869447373247844, + "lat": -0.18975763543075347 + }, + "bbox": [ + 34.84696420979499, + -0.21224067557872173, + 34.8919305367007, + -0.1672745952827852 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0348_random_ecological_packet.png", + "sha256": "3637a57dc491fec8686edc1fc79ab3a6f4482fecef583ccc76bf7a73495e2566", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0348_random_ecological", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0348_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0348_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0348_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0348_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0348_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0348_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 49.99, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 261038, + "min": 0.0007, + "max": 30.5612, + "mean": 7.3179, + "median": 5.9137, + "p90": 15.3287 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 1, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 21 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 1, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0351_random_ecological_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0351_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..fbf6daa302e673a64b69d8cf57a8b3277bdb853b --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0351_random_ecological_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0351_random_ecological", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 35.14758370105486, + "lat": -0.1615329879934269 + }, + "bbox": [ + 35.12510057155502, + -0.18401602814139517, + 35.1700668305547, + -0.13904994784545865 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0351_random_ecological_packet.png", + "sha256": "3e0c4e46269e01bcc048e42a8f0cede52b738a8ae41ea4ea63fe1aa90e7fd3fa", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0351_random_ecological", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0351_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0351_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0351_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0351_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0351_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0351_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 57.4321, + "repair_attempts": 1 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 61216, + "min": 0.0002, + "max": 9.3758, + "mean": 1.7845, + "median": 1.6289, + "p90": 3.4049 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 2, + "urban_landuse": 1, + "water_surface": 0, + "waterways": 8 + }, + "label_counts": { + "vector_label": 3, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0357_random_ecological_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0357_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..5cef50e56a0dbe0a9f0ad77036335246d83c5dd9 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0357_random_ecological_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0357_random_ecological", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.820691659031674, + "lat": 0.01981045878178178 + }, + "bbox": [ + 34.7982086175398, + -0.002672581366186484, + 34.84317470052355, + 0.04229349892975005 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0357_random_ecological_packet.png", + "sha256": "d1be332e329ace7345392e190d70187f40cef856538f80c92b53372c9e858885", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0357_random_ecological", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0357_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0357_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0357_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0357_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0357_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0357_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 39.5497, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.6694, + "mean": 0.0261, + "median": 0.0, + "p90": 0.0752 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 48746, + "min": 0.0038, + "max": 27.9847, + "mean": 8.5042, + "median": 7.3639, + "p90": 16.1678 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 2, + "urban_landuse": 2, + "water_surface": 29, + "waterways": 8 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 3, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0360_random_ecological_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0360_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..b4be2ad548f2ff1e50ae0d151ad7842f23b47446 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0360_random_ecological_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0360_random_ecological", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 35.12721792733822, + "lat": -0.11534938977022313 + }, + "bbox": [ + 35.104734841627376, + -0.1378324299181914, + 35.14970101304907, + -0.09286634962225487 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0360_random_ecological_packet.png", + "sha256": "b15cfee31c537416f4c5f8beb3f2c879b82314f2f08de6008f133ee95608e511", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0360_random_ecological", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0360_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0360_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0360_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0360_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0360_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0360_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 53.6178, + "repair_attempts": 2 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 161001, + "min": 0.0002, + "max": 23.1897, + "mean": 3.587, + "median": 2.5076, + "p90": 8.6606 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 7, + "urban_landuse": 2, + "water_surface": 0, + "waterways": 12 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0366_random_ecological_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0366_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..0e78afc57587ee3eb0a27fe8e4e2a2cd4d992201 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0366_random_ecological_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0366_random_ecological", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.964551594742126, + "lat": -0.2627097528193376 + }, + "bbox": [ + 34.94206831825484, + -0.2851927929673059, + 34.98703487122941, + -0.24022671267136936 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0366_random_ecological_packet.png", + "sha256": "feeb0bf40ef6173416d6b1b81f4c4de6bfbb2b9196691192b84db81f1e12eb36", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0366_random_ecological", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0366_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0366_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0366_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0366_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0366_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0366_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 55.7886, + "repair_attempts": 1 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 262144, + "min": 0.0002, + "max": 29.0789, + "mean": 6.9767, + "median": 5.4415, + "p90": 14.8047 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 11, + "urban_landuse": 0, + "water_surface": 6, + "waterways": 8 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0373_uncertain_sparse_context_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0373_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..5436b9dc6179cfa30faac78959f0c6adea6dbe4c --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0373_uncertain_sparse_context_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0373_uncertain_sparse_context", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.8441738551609, + "lat": -0.16737237531840624 + }, + "bbox": [ + 34.82169071908417, + -0.1898554154663745, + 34.86665699123764, + -0.14488933517043798 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0373_uncertain_sparse_context_packet.png", + "sha256": "ff24830e83a51069ea3c2e3f5e0c311d3abf88104701a1c3dc2cac51e6c17723", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0373_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0373_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0373_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0373_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0373_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0373_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0373_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 54.2822, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 258104, + "min": 0.0002, + "max": 32.3658, + "mean": 8.4765, + "median": 7.0011, + "p90": 17.5979 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 4, + "urban_landuse": 3, + "water_surface": 1, + "waterways": 153 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 1, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0374_uncertain_sparse_context_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0374_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..4bef2fc498a35ef8b29e836d27e0fe729296af2d --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0374_uncertain_sparse_context_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0374_uncertain_sparse_context", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.82231981017415, + "lat": -0.1490004884073833 + }, + "bbox": [ + 34.79983669400119, + -0.17148352855535157, + 34.84480292634711, + -0.12651744825941505 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0374_uncertain_sparse_context_packet.png", + "sha256": "c216b505ffbb9a3fe66c77332c063b3f3ef5fefc67db8af7d43ac1a54318a524", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0374_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0374_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0374_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0374_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0374_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0374_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0374_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 57.4171, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 254424, + "min": 0.0006, + "max": 55.1111, + "mean": 14.4273, + "median": 13.2989, + "p90": 25.5391 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 6, + "urban_landuse": 1, + "water_surface": 3, + "waterways": 197 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 1, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0375_uncertain_sparse_context_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0375_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..9cb46492aa4c09900e6cc52994a8ab402a2a7598 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0375_uncertain_sparse_context_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0375_uncertain_sparse_context", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.97530422914711, + "lat": -0.2468379668732685 + }, + "bbox": [ + 34.95282098035459, + -0.2693210070212368, + 34.99778747793964, + -0.22435492672530025 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0375_uncertain_sparse_context_packet.png", + "sha256": "41c938f539aa4e67ebedb53300fa35be0400668d76e06b6ec410d130d106290a", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0375_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0375_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0375_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0375_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0375_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0375_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0375_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 59.0108, + "repair_attempts": 1 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 260901, + "min": 0.0002, + "max": 28.5626, + "mean": 3.8643, + "median": 2.3669, + "p90": 9.0225 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 12, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 6 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0376_uncertain_sparse_context_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0376_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..de335c6afa0dc63d478956f263a072270d142ab4 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0376_uncertain_sparse_context_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0376_uncertain_sparse_context", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.86278816521965, + "lat": -0.09334430028139029 + }, + "bbox": [ + 34.84030509523463, + -0.11582734042935855, + 34.88527123520466, + -0.07086126013342203 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0376_uncertain_sparse_context_packet.png", + "sha256": "71dadaf537531e1b2f83ba2c00f982e2039cfdd9cd01a5a8b23e9ebc3a333b62", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0376_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0376_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0376_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0376_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0376_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0376_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0376_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 55.7878, + "repair_attempts": 2 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 209174, + "min": 0.0002, + "max": 41.2918, + "mean": 10.6567, + "median": 8.4889, + "p90": 24.0243 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 10, + "urban_landuse": 0, + "water_surface": 4, + "waterways": 14 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 1, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0377_uncertain_sparse_context_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0377_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..13d61163cd57c4db7b74dd5714422f845f491ff1 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0377_uncertain_sparse_context_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0377_uncertain_sparse_context", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 35.141748562952046, + "lat": -0.07826478818507987 + }, + "bbox": [ + 35.11926550182855, + -0.10074782833304813, + 35.16423162407554, + -0.055781748037111605 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0377_uncertain_sparse_context_packet.png", + "sha256": "240e52b0f1f3b09fd67596395730b7b59d43909dece20afb2fab6fcbbc17fb3d", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0377_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0377_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0377_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0377_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0377_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0377_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0377_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 53.9243, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 165718, + "min": 0.0003, + "max": 32.504, + "mean": 4.4795, + "median": 2.3456, + "p90": 11.9064 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 20, + "urban_landuse": 126, + "water_surface": 25, + "waterways": 11 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 1, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0383_uncertain_sparse_context_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0383_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..64eb8eeccafd577656b9c5f1468c66ae015bd21f --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0383_uncertain_sparse_context_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0383_uncertain_sparse_context", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.991649889022675, + "lat": -0.06755165434312381 + }, + "bbox": [ + 34.96916683324856, + -0.09003469449109208, + 35.01413294479679, + -0.045068614195155544 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0383_uncertain_sparse_context_packet.png", + "sha256": "6d208783505f6ed00755ad8a8b0e06120499d0c4e534926307b97c8c11ce74d1", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0383_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0383_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0383_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0383_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0383_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0383_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0383_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 57.84, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 174907, + "min": 0.0005, + "max": 30.2967, + "mean": 7.3665, + "median": 6.3443, + "p90": 15.7725 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 5, + "urban_landuse": 1, + "water_surface": 0, + "waterways": 10 + }, + "label_counts": { + "vector_label": 3, + "disease_label": 2, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0384_uncertain_sparse_context_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0384_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..2a6a29b9ce4f3e05e5af6339acdccdd4b58541d0 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0384_uncertain_sparse_context_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0384_uncertain_sparse_context", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.78428738472998, + "lat": -0.1767167865237956 + }, + "bbox": [ + 34.761804237642764, + -0.19919982667176386, + 34.80677053181719, + -0.15423374637582735 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0384_uncertain_sparse_context_packet.png", + "sha256": "c2e35fe0634674e90691128c57df573688ffb0f66e23fc12856af022d5e633c3", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0384_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0384_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0384_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0384_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0384_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0384_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0384_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 42.94, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 92110, + "min": 0.0001, + "max": 32.6107, + "mean": 5.6414, + "median": 3.303, + "p90": 15.4469 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 0, + "urban_landuse": 0, + "water_surface": 1, + "waterways": 8 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0385_uncertain_sparse_context_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0385_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..5a85a27f645c3dfb077264b5e3502dac949373d3 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0385_uncertain_sparse_context_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0385_uncertain_sparse_context", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.96654552372019, + "lat": -0.017090662974414316 + }, + "bbox": [ + 34.944062482572, + -0.03957370312238258, + 34.989028564868384, + 0.005392377173553949 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0385_uncertain_sparse_context_packet.png", + "sha256": "cc9ef3ed6372296018cc8a6172a440e8de75d2513cf578a06ee7e815ff3b95a9", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0385_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0385_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0385_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0385_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0385_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0385_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0385_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 59.4466, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 4.2795, + "mean": 1.3789, + "median": 1.0611, + "p90": 3.4744 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 20701, + "min": 0.0003, + "max": 5.1354, + "mean": 0.8812, + "median": 0.428, + "p90": 2.4446 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 0, + "urban_landuse": 5, + "water_surface": 0, + "waterways": 36 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 1, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0386_uncertain_sparse_context_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0386_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..8981bac75ddc8525e8996cb341aeb2f8fb183c3b --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0386_uncertain_sparse_context_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0386_uncertain_sparse_context", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 35.12419168525979, + "lat": -0.0031635050384891854 + }, + "bbox": [ + 35.10170864507755, + -0.02564654518645745, + 35.146674725442026, + 0.01931953510947908 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0386_uncertain_sparse_context_packet.png", + "sha256": "f412c63fb305c4df8099fea3e4c8787449fbdb22510f7f6e0418c9285121cce8", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0386_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0386_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0386_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0386_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0386_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0386_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0386_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 53.9766, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 3.4366, + "mean": 0.44, + "median": 0.0104, + "p90": 1.5289 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 39340, + "min": 0.0004, + "max": 9.8155, + "mean": 2.4967, + "median": 2.0132, + "p90": 5.1906 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 4, + "urban_landuse": 381, + "water_surface": 0, + "waterways": 18 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0387_uncertain_sparse_context_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0387_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..3b40735f9c7a6c33f9beefded603823afb6a0882 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0387_uncertain_sparse_context_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0387_uncertain_sparse_context", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 35.10599219844784, + "lat": -0.029359287866257577 + }, + "bbox": [ + 35.083509155348175, + -0.05184232801422584, + 35.1284752415475, + -0.006876247718289312 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0387_uncertain_sparse_context_packet.png", + "sha256": "afdb2d3aff3b9b4e28f7fc3ace8f1b690657794d54bf162c08e0faf32e3cff13", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0387_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0387_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0387_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0387_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0387_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0387_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0387_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 57.2989, + "repair_attempts": 2 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 2.5018, + "mean": 0.2335, + "median": 0.0, + "p90": 0.9122 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 131351, + "min": 0.0004, + "max": 9.6595, + "mean": 1.9003, + "median": 1.6503, + "p90": 4.0512 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 2, + "urban_landuse": 19, + "water_surface": 0, + "waterways": 15 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 4, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0398_uncertain_sparse_context_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0398_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..3fdad8c5ec153f79480354750424d1c20b8154b3 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0398_uncertain_sparse_context_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0398_uncertain_sparse_context", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.79595734809711, + "lat": -0.14047713416080476 + }, + "bbox": [ + 34.7734742403732, + -0.16296017430877302, + 34.818440455821026, + -0.1179940940128365 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0398_uncertain_sparse_context_packet.png", + "sha256": "565d22ed04bb23e1adbe57a81b15eda46377644155cea91e8d60be709d8402fe", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0398_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0398_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0398_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0398_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0398_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0398_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0398_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 52.0597, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 237288, + "min": 0.0001, + "max": 61.6145, + "mean": 22.8472, + "median": 19.9532, + "p90": 48.7098 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 7, + "urban_landuse": 0, + "water_surface": 16, + "waterways": 97 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 1, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0399_uncertain_sparse_context_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0399_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..2a2f9f2ace42c2d1701a7f2e3be1fa81ea55eab6 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0399_uncertain_sparse_context_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0399_uncertain_sparse_context", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 35.12941648080542, + "lat": -0.07851153629931107 + }, + "bbox": [ + 35.10693341954945, + -0.10099457644727933, + 35.151899542061386, + -0.0560284961513428 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0399_uncertain_sparse_context_packet.png", + "sha256": "00c1d3571f2f52bb567d42b31022de37de41f955163772ffff66ab63d9ea39c7", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0399_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0399_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0399_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0399_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0399_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0399_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0399_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 53.3857, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 114722, + "min": 0.0003, + "max": 32.4762, + "mean": 5.0522, + "median": 2.3924, + "p90": 14.1366 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 20, + "urban_landuse": 177, + "water_surface": 25, + "waterways": 8 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 1, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0401_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0401_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..d6a1595a714990c21c7cc6fce7efd3e8c152adfd --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0401_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0401_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.917489807461095, + "lat": -0.1851406278167916 + }, + "bbox": [ + 34.89500664993555, + -0.20762366796475987, + 34.93997296498664, + -0.16265758766882335 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0401_label_positive_jitter_packet.png", + "sha256": "41892c2629d393549975335732c283e8a6d2069ef10dc60daf369bf3cd8ca59b", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0401_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0401_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0401_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0401_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0401_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0401_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0401_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 58.3039, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 235813, + "min": 0.0002, + "max": 37.4875, + "mean": 10.4421, + "median": 7.3212, + "p90": 24.681 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 6, + "urban_landuse": 0, + "water_surface": 1, + "waterways": 50 + }, + "label_counts": { + "vector_label": 99, + "disease_label": 8, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0407_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0407_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..3c1b6a644a6b9187ba4f1588559d7027f2ee8375 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0407_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0407_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.917490008465414, + "lat": -0.12875206463104222 + }, + "bbox": [ + 34.89500691155134, + -0.15123510477901048, + 34.93997310537949, + -0.10626902448307396 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0407_label_positive_jitter_packet.png", + "sha256": "dbb50c418210f7a67b0a38b11edc46a078b119021cd416c023a596773f759bd3", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0407_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0407_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0407_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0407_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0407_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0407_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0407_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 54.3623, + "repair_attempts": 2 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 194214, + "min": 0.0002, + "max": 22.1142, + "mean": 2.6988, + "median": 1.9283, + "p90": 6.4997 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 6, + "urban_landuse": 1, + "water_surface": 0, + "waterways": 22 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0413_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0413_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..aa53f9e302fb744b7de733f1082f7b8771438926 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0413_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0413_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.91763854617447, + "lat": -0.19519645277313674 + }, + "bbox": [ + 34.89515537555198, + -0.217679492921105, + 34.940121716796966, + -0.17271341262516848 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0413_label_positive_jitter_packet.png", + "sha256": "6828ea4d80134103a1baa5d288a939ce6f81326d9490a59d643cc2dd327d48e1", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0413_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0413_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0413_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0413_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0413_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0413_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0413_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 57.9059, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 242589, + "min": 0.0001, + "max": 37.5022, + "mean": 8.3469, + "median": 5.1772, + "p90": 20.5538 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 4, + "urban_landuse": 0, + "water_surface": 1, + "waterways": 50 + }, + "label_counts": { + "vector_label": 98, + "disease_label": 11, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0415_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0415_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..f7c81cbe243b2489329958b32ea45c026a66cfcc --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0415_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0415_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.964956792409005, + "lat": -0.18622926861614206 + }, + "bbox": [ + 34.94247363349902, + -0.20871230876411032, + 34.98743995131899, + -0.1637462284681738 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0415_label_positive_jitter_packet.png", + "sha256": "3d9b381653b6d823da2b99f7d26643ac2891173f34dc51913649bc1fb421de3b", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0415_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0415_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0415_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0415_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0415_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0415_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0415_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 56.4125, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 242228, + "min": 0.0002, + "max": 26.9135, + "mean": 4.9739, + "median": 2.4772, + "p90": 13.8463 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 7, + "urban_landuse": 0, + "water_surface": 1, + "waterways": 13 + }, + "label_counts": { + "vector_label": 18, + "disease_label": 3, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0418_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0418_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..3e6496eeb88550a072fdaef5da44b1219d1da592 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0418_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0418_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.91566331422615, + "lat": -0.18184501853051913 + }, + "bbox": [ + 34.89318016084221, + -0.20432805867848738, + 34.93814646761009, + -0.15936197838255087 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0418_label_positive_jitter_packet.png", + "sha256": "3e84fb636707a5986fcb0a08815ecd3ef59b717460726870bc59792e81210564", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0418_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0418_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0418_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0418_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0418_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0418_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0418_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 58.2642, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 234252, + "min": 0.0002, + "max": 37.4865, + "mean": 10.4704, + "median": 7.6104, + "p90": 24.4805 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 7, + "urban_landuse": 0, + "water_surface": 1, + "waterways": 44 + }, + "label_counts": { + "vector_label": 121, + "disease_label": 8, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0423_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0423_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..5effa9a863388a47fc255d809f399ca333ce27b0 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0423_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0423_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 35.15235818384654, + "lat": -0.12527336212405493 + }, + "bbox": [ + 35.12987508995852, + -0.1477564022720232, + 35.17484127773456, + -0.10279032197608667 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0423_label_positive_jitter_packet.png", + "sha256": "6926ee4fa8e8090a3421f22ad8c49834e6033cd6da88c3333d8482413c083496", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0423_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0423_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0423_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0423_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0423_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0423_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0423_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 53.5194, + "repair_attempts": 2 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 160877, + "min": 0.0003, + "max": 20.8631, + "mean": 2.6507, + "median": 1.9806, + "p90": 5.9547 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 1, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 13 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0424_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0424_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..99d714fa36a39522fd3859d7ac131d32913a528b --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0424_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0424_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.98275499928353, + "lat": -0.050154669250483425 + }, + "bbox": [ + 34.9602719505216, + -0.07263770939845168, + 35.005238048045456, + -0.02767162910251516 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0424_label_positive_jitter_packet.png", + "sha256": "cca0b47f6570e602ce439163f7d1a3d1e63b1b88c0c3311ee483715d5d44ca7a", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0424_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0424_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0424_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0424_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0424_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0424_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0424_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 56.9883, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 79381, + "min": 0.0003, + "max": 30.4546, + "mean": 3.7392, + "median": 1.8914, + "p90": 10.5795 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 3, + "urban_landuse": 3, + "water_surface": 0, + "waterways": 6 + }, + "label_counts": { + "vector_label": 18, + "disease_label": 2, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0425_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0425_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..931d57c9b0a11adba19a9fef93189ab6ea5b2535 --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0425_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0425_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 35.30313262908504, + "lat": -0.22110286362322337 + }, + "bbox": [ + 35.280649421531, + -0.24358590377119163, + 35.32561583663908, + -0.19861982347525511 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0425_label_positive_jitter_packet.png", + "sha256": "f443abea803fc24f0a297437017f051e30989e3a68d2dc8b5c0509b0b8e8015b", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0425_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0425_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0425_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0425_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0425_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0425_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0425_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 62.8018, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 208939, + "min": 0.0004, + "max": 22.6718, + "mean": 2.4301, + "median": 1.6054, + "p90": 5.5678 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 2, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 1 + }, + "label_counts": { + "vector_label": 3, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/kisumu_malaria/kisumu_malaria_s0428_label_positive_jitter_sidecar.json b/sidecars/kisumu_malaria/kisumu_malaria_s0428_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..33370957ab03319397bcd9aa0d9ca52850dd32fb --- /dev/null +++ b/sidecars/kisumu_malaria/kisumu_malaria_s0428_label_positive_jitter_sidecar.json @@ -0,0 +1,154 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "kisumu_malaria_s0428_label_positive_jitter", + "aoi_id": "kisumu_malaria", + "split": "train", + "disease_module": "mosquito_anopheles_malaria", + "primary_disease": "malaria", + "country": "Kenya", + "name": "Kisumu County, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.91593976700356, + "lat": -0.17560806234569748 + }, + "bbox": [ + 34.89345662125402, + -0.19809110249366574, + 34.9384229127531, + -0.15312502219772922 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/kisumu_malaria/kisumu_malaria_s0428_label_positive_jitter_packet.png", + "sha256": "29b70de231159641feb80670480b3ab2611042383669a92b0219a564534b323a", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/kisumu_malaria/kisumu_malaria_s0428_label_positive_jitter", + "sentinel_rgb": "simsat_raw/kisumu_malaria/kisumu_malaria_s0428_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/kisumu_malaria/kisumu_malaria_s0428_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/kisumu_malaria/kisumu_malaria_s0428_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0428_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/kisumu_malaria/kisumu_malaria_s0428_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/kisumu_malaria/kisumu_malaria_s0428_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/kisumu_kenya/kisumu_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/kisumu_kenya/kisumu_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/kisumu_kenya/kisumu_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/kisumu_kenya/osm_health_facilities_kisumu.overpass.json", + "major_roads": "data/raw/osm/kisumu_kenya/osm_major_roads_kisumu.overpass.json", + "urban_landuse": "data/raw/osm/kisumu_kenya/osm_urban_landuse_kisumu.overpass.json", + "water_surface": "data/raw/osm/kisumu_kenya/osm_water_surface_kisumu.overpass.json", + "waterways": "data/raw/osm/kisumu_kenya/osm_waterways_kisumu.overpass.json" + }, + "labels": { + "gbif_vector": [ + "data/raw/map_gbif/kisumu_kenya/gbif_anopheles_kisumu_occurrences.csv" + ], + "map_disease": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_pf_pr_202406_kisumu_bbox.geojson", + "data/raw/map_malariaatlas/kisumu_kenya/map_pv_pr_202406_kisumu_bbox.geojson" + ], + "map_vector": [ + "data/raw/map_malariaatlas/kisumu_kenya/map_dominant_vector_surveys_201201_kisumu_bbox.geojson" + ] + } + }, + "aoi_manifest": "data/manifests/kisumu_malaria_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 0.594942, + "sentinel_datetime": "2025-11-11T08:10:07Z", + "sentinel_source": "sentinel-2b", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 57.9644, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 228210, + "min": 0.0001, + "max": 37.5005, + "mean": 10.5916, + "median": 7.8101, + "p90": 24.756 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 8, + "urban_landuse": 0, + "water_surface": 1, + "waterways": 45 + }, + "label_counts": { + "vector_label": 121, + "disease_label": 8, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0001_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0001_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..8c9ad460e4467de5bddf73c9f05e5fba7041f93f --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0001_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0001_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.29461801657802, + "lat": -0.4888608108306171 + }, + "bbox": [ + 34.27213415803424, + -0.5113438509785854, + 34.3171018751218, + -0.46637777068264885 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0001_label_positive_jitter_packet.png", + "sha256": "809cf0273919d3f38e45b6d2dbcab453643654153d093c412f65fd13da9effcb", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0001_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0001_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0001_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0001_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0001_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0001_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0001_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 48.4402, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0004, + "max": 3.9664, + "mean": 1.3009, + "median": 1.1153, + "p90": 2.7538 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 194144, + "min": 0.0, + "max": 33.2816, + "mean": 4.1832, + "median": 2.5014, + "p90": 10.0019 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 63, + "schools_waterpoints": 4, + "urban_landuse": 3749, + "water_surface": 0, + "waterways": 8 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 18, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0002_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0002_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..a0715ad16328c3591b58ac889b9d5bb357dcc568 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0002_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0002_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.2918016151899, + "lat": -0.4837780378494966 + }, + "bbox": [ + 34.26931777357617, + -0.5062610779974649, + 34.314285456803624, + -0.4612949977015283 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0002_label_positive_jitter_packet.png", + "sha256": "4b3090979e52766054e7fbb8e13507b677cce79158cb15129b09a5671df9392a", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0002_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0002_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0002_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0002_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0002_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0002_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0002_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 47.969, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0008, + "max": 3.8741, + "mean": 1.3504, + "median": 1.2002, + "p90": 2.7968 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 178427, + "min": 0.0, + "max": 32.8995, + "mean": 3.9534, + "median": 2.3616, + "p90": 9.5198 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 62, + "schools_waterpoints": 4, + "urban_landuse": 3436, + "water_surface": 0, + "waterways": 7 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 20, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0003_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0003_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..b0cd85033454cc1eda23132f216abde91409776c --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0003_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0003_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.24721589658539, + "lat": -0.43319520150985974 + }, + "bbox": [ + 34.22473221381275, + -0.455678241657828, + 34.269699579358026, + -0.4107121613618915 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0003_label_positive_jitter_packet.png", + "sha256": "d1668cdaa4a223fe360dc41604c0d5116d39af01d09fef2c7ae6b8c0bdad575b", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0003_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0003_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0003_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0003_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0003_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0003_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0003_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 43.1369, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 1.8823, + "max": 4.953, + "mean": 4.0303, + "median": 4.1826, + "p90": 4.6255 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 87692, + "min": 0.0, + "max": 34.6409, + "mean": 4.0429, + "median": 2.7646, + "p90": 8.46 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 15, + "schools_waterpoints": 0, + "urban_landuse": 2104, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 11, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0004_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0004_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..eccde7654685bc07981f518b2f05ce5f42d15589 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0004_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0004_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.180401998129824, + "lat": -0.42103599155018 + }, + "bbox": [ + 34.15791835092693, + -0.44351903169814827, + 34.20288564533272, + -0.39855295140221175 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0004_label_positive_jitter_packet.png", + "sha256": "54a931b16d1c6251b263b10ecd529c6c68ec5a8abf3a478d6998db9e5f0234de", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0004_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0004_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0004_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0004_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0004_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0004_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0004_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 50.4496, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.3384, + "max": 5.1255, + "mean": 4.3045, + "median": 4.5886, + "p90": 5.0394 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 161061, + "min": 0.0, + "max": 43.4244, + "mean": 6.7154, + "median": 3.6709, + "p90": 18.5897 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 85, + "schools_waterpoints": 4, + "urban_landuse": 4829, + "water_surface": 10, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 3, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0005_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0005_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..35d4d7dbf0ba783aa7bd59dd7a3d35469f5510cf --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0005_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0005_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.22611012590131, + "lat": -0.428246556526692 + }, + "bbox": [ + 34.20362645772731, + -0.4507295966746603, + 34.248593794075305, + -0.40576351637872377 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0005_label_positive_jitter_packet.png", + "sha256": "f716eff9a03d018b9ad593ea2504a50dff8b612e8450abafd3c43470cf5c7920", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0005_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0005_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0005_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0005_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0005_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0005_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0005_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 44.2541, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 3.4914, + "max": 5.0282, + "mean": 4.5615, + "median": 4.5953, + "p90": 4.8813 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 107843, + "min": 0.0, + "max": 63.8205, + "mean": 17.5334, + "median": 12.1399, + "p90": 42.1354 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 88, + "schools_waterpoints": 4, + "urban_landuse": 6120, + "water_surface": 2, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 29, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0008_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0008_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..4667f1909fc6155818deff59432c6ff5be769a1c --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0008_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0008_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.206686868662096, + "lat": -0.4195720287128376 + }, + "bbox": [ + 34.18420322567347, + -0.44205506886080587, + 34.22917051165072, + -0.39708898856486935 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0008_label_positive_jitter_packet.png", + "sha256": "1bb432127d75848687a38187eca32c6163ed57fc9f02f1bea31e4637673d8a85", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0008_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0008_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0008_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0008_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0008_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0008_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0008_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 46.6879, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.6624, + "max": 5.0593, + "mean": 4.4958, + "median": 4.6596, + "p90": 4.9143 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 119713, + "min": 0.0, + "max": 63.8167, + "mean": 16.0648, + "median": 8.4478, + "p90": 41.3083 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 97, + "schools_waterpoints": 8, + "urban_landuse": 7178, + "water_surface": 7, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0009_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0009_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..7187396d5fc5c5f270d78c0e477862c00e56d397 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0009_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0009_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.2951839707669, + "lat": -0.4786833341925079 + }, + "bbox": [ + 34.272700145945365, + -0.5011663743404762, + 34.317667795588434, + -0.45620029404453966 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0009_label_positive_jitter_packet.png", + "sha256": "c180a4fc4f35a756630e04914d2d9a178be85d3a3ae453a553392f65cacb8292", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0009_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0009_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0009_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0009_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0009_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0009_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0009_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 49.1827, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.001, + "max": 4.2213, + "mean": 1.748, + "median": 1.6699, + "p90": 3.3059 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 161206, + "min": 0.0, + "max": 33.0682, + "mean": 3.53, + "median": 2.106, + "p90": 8.7095 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 46, + "schools_waterpoints": 3, + "urban_landuse": 3022, + "water_surface": 0, + "waterways": 7 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 20, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0010_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0010_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..b9e9eeb19183876456f3ccaf40ebc69143913488 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0010_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0010_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.201877145327316, + "lat": -0.4204394276720929 + }, + "bbox": [ + 34.1793934998435, + -0.44292246782006117, + 34.22436079081113, + -0.39795638752412466 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0010_label_positive_jitter_packet.png", + "sha256": "64eb0edf61fa2605be9cc01c55ce6097c89efa5f00eb6c39fff06bf8fcb6564c", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0010_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0010_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0010_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0010_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0010_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0010_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0010_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 46.7304, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.4965, + "max": 5.0947, + "mean": 4.4718, + "median": 4.6515, + "p90": 4.9496 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 132897, + "min": 0.0, + "max": 63.8438, + "mean": 15.3054, + "median": 7.1882, + "p90": 40.4755 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 112, + "schools_waterpoints": 9, + "urban_landuse": 7655, + "water_surface": 12, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0011_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0011_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..3f4b0c8956a3f5e833f18e66ccbfc669bfce440c --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0011_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0011_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.21095086798761, + "lat": -0.42010284861054675 + }, + "bbox": [ + 34.18846722347263, + -0.442585888758515, + 34.2334345125026, + -0.3976198084625785 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0011_label_positive_jitter_packet.png", + "sha256": "7a86fb0d917ab35e7065b4c99bae77ca1934cdfe051bf716b63ec6f54a9bdd65", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0011_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0011_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0011_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0011_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0011_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0011_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0011_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 46.3373, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.9169, + "max": 5.0399, + "mean": 4.5378, + "median": 4.6456, + "p90": 4.8949 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 109622, + "min": 0.0, + "max": 63.8957, + "mean": 17.6949, + "median": 10.7647, + "p90": 42.1427 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 86, + "schools_waterpoints": 8, + "urban_landuse": 6927, + "water_surface": 3, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0013_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0013_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..0fbecd815fbc765b7170a9257a3a0615e110451b --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0013_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0013_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.281859844584154, + "lat": -0.4789366167906528 + }, + "bbox": [ + 34.259376018932, + -0.5014196569386211, + 34.30434367023631, + -0.45645357664268454 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0013_label_positive_jitter_packet.png", + "sha256": "d563c0bb93bf70b5c776d8eca8ec9ee051acca5c3a6e9ec2d06e594a50ce5ec3", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0013_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0013_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0013_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0013_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0013_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0013_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0013_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 47.5084, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0018, + "max": 3.3504, + "mean": 1.1942, + "median": 1.1072, + "p90": 2.2789 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 168454, + "min": 0.0, + "max": 21.8583, + "mean": 2.5807, + "median": 1.9293, + "p90": 6.4374 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 56, + "schools_waterpoints": 1, + "urban_landuse": 2641, + "water_surface": 0, + "waterways": 7 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 20, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0016_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0016_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..1d974be1c903cce3a66ce850c0f03294b51d8c01 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0016_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0016_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.28796497735405, + "lat": -0.47722821535082316 + }, + "bbox": [ + 34.265481157295966, + -0.4997112554987914, + 34.310448797412135, + -0.4547451752028549 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0016_label_positive_jitter_packet.png", + "sha256": "601bb298b47c1893ab71403e4ff222bccf67734744d5cf601c839f48095612d3", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0016_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0016_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0016_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0016_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0016_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0016_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0016_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 48.2023, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0003, + "max": 3.799, + "mean": 1.438, + "median": 1.3587, + "p90": 2.8094 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 160547, + "min": 0.0, + "max": 32.7788, + "mean": 3.0988, + "median": 2.0115, + "p90": 7.6635 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 52, + "schools_waterpoints": 2, + "urban_landuse": 2821, + "water_surface": 0, + "waterways": 7 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 20, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0017_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0017_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..420118a5d6cb2f939034b58dfa16787443063cb6 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0017_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0017_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.197121027504124, + "lat": -0.42603789699625416 + }, + "bbox": [ + 34.1746373657916, + -0.4485209371442224, + 34.21960468921665, + -0.4035548568482859 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0017_label_positive_jitter_packet.png", + "sha256": "79f00b1135147c33876e1a6f05846f1b91acf26b59facce86d7a12501d3f7cec", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0017_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0017_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0017_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0017_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0017_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0017_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0017_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 44.2232, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.8341, + "max": 5.1715, + "mean": 4.6082, + "median": 4.7918, + "p90": 5.0282 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 132791, + "min": 0.0, + "max": 63.8, + "mean": 16.7629, + "median": 9.8805, + "p90": 40.3981 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 117, + "schools_waterpoints": 9, + "urban_landuse": 7779, + "water_surface": 12, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0018_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0018_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..1475a8c63029e89edd76c291812d4c463be63357 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0018_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0018_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.22322876755491, + "lat": -0.41397491438000095 + }, + "bbox": [ + 34.200745140543205, + -0.4364579545279692, + 34.24571239456661, + -0.3914918742320327 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0018_label_positive_jitter_packet.png", + "sha256": "56297a534eaf819bce241e7fd448f4f5f40c9734ba68646c9a19c744b34518c8", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0018_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0018_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0018_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0018_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0018_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0018_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0018_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 42.3564, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 3.2394, + "max": 4.9135, + "mean": 4.5012, + "median": 4.5576, + "p90": 4.7627 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 61210, + "min": 0.0, + "max": 63.8811, + "mean": 15.9346, + "median": 8.0666, + "p90": 42.8298 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 64, + "schools_waterpoints": 4, + "urban_landuse": 4203, + "water_surface": 3, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 24, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0020_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0020_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..ce83f1ac752abda68339078d323d8703333b8500 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0020_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0020_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.21362472492533, + "lat": -0.4258330150033155 + }, + "bbox": [ + 34.19114106381049, + -0.44831605515128375, + 34.23610838604017, + -0.40334997485534724 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0020_label_positive_jitter_packet.png", + "sha256": "0455a45444ffce06ef31d8f7ca6cf0dcd5bdef1f28acc93bd30fd50e4518cd3c", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0020_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0020_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0020_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0020_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0020_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0020_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0020_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 45.8501, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 3.4298, + "max": 5.0773, + "mean": 4.6406, + "median": 4.673, + "p90": 4.9323 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 113507, + "min": 0.0, + "max": 63.8242, + "mean": 20.6535, + "median": 18.035, + "p90": 41.8491 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 100, + "schools_waterpoints": 8, + "urban_landuse": 7529, + "water_surface": 3, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 32, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0021_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0021_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..4de18dde62c76878274131568ac0eb03c4282fde --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0021_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0021_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.209535204446134, + "lat": -0.4308455398658983 + }, + "bbox": [ + 34.18705152862598, + -0.45332858001386656, + 34.23201888026629, + -0.40836249971793004 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0021_label_positive_jitter_packet.png", + "sha256": "a3bbf362fb8e71da1f32eace8520db2239c828df9f0e467c06a28eb5c9f6b4d1", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0021_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0021_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0021_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0021_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0021_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0021_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0021_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 45.2705, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 3.6482, + "max": 5.1469, + "mean": 4.734, + "median": 4.7762, + "p90": 5.0017 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 121347, + "min": 0.0, + "max": 63.9065, + "mean": 19.3518, + "median": 15.3129, + "p90": 41.2053 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 102, + "schools_waterpoints": 6, + "urban_landuse": 7407, + "water_surface": 3, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0025_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0025_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..2bd8453fc5125ea642c317a388f9c08fb6873571 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0025_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0025_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.148797825800195, + "lat": -0.3951741080256922 + }, + "bbox": [ + 34.126314250884306, + -0.41765714817366045, + 34.17128140071608, + -0.37269106787772394 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0025_label_positive_jitter_packet.png", + "sha256": "7561bf957afcd6527f336513c153e92e95ec32f049d63813347624a713da2e33", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0025_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0025_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0025_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0025_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0025_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0025_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0025_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 48.7167, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 4.2246, + "mean": 2.0055, + "median": 1.9996, + "p90": 3.7802 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 104601, + "min": 0.0, + "max": 37.1016, + "mean": 7.9803, + "median": 4.9238, + "p90": 21.6011 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 61, + "schools_waterpoints": 0, + "urban_landuse": 3581, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 1, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0026_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0026_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..70f59dae5d7b58a74d3cdf5960b606404638f660 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0026_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0026_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.28986318786885, + "lat": -0.4809554104569205 + }, + "bbox": [ + 34.2673793555805, + -0.5034384506048888, + 34.312347020157205, + -0.4584723703089522 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0026_label_positive_jitter_packet.png", + "sha256": "2860b3fa2e627ea16ae94fe4e63ad01061efd0b99d3621a1b0bfad27a6be0932", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0026_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0026_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0026_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0026_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0026_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0026_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0026_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 48.0692, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0012, + "max": 3.8141, + "mean": 1.3688, + "median": 1.2476, + "p90": 2.7809 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 167711, + "min": 0.0, + "max": 32.9309, + "mean": 3.5726, + "median": 2.1988, + "p90": 8.7363 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 57, + "schools_waterpoints": 4, + "urban_landuse": 3085, + "water_surface": 0, + "waterways": 7 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 20, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0027_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0027_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..3439b01f2a364798cece00593d0b8d704ad3a842 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0027_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0027_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.216609624693845, + "lat": -0.4284019156046441 + }, + "bbox": [ + 34.194125956064084, + -0.45088495575261234, + 34.239093293323606, + -0.4059188754566758 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0027_label_positive_jitter_packet.png", + "sha256": "106adf5e6fc72d4d0ad43e91d1dc74d0f3ac5abd57dc445c60bf3b5b54746cd9", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0027_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0027_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0027_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0027_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0027_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0027_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0027_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 45.8038, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 3.6984, + "max": 5.0839, + "mean": 4.6595, + "median": 4.6731, + "p90": 4.9389 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 118370, + "min": 0.0, + "max": 63.8097, + "mean": 20.0069, + "median": 17.0398, + "p90": 41.4397 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 99, + "schools_waterpoints": 5, + "urban_landuse": 7576, + "water_surface": 3, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 30, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0028_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0028_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..14ff473ffd21127d94d91cc54178eefb1b8ed9a2 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0028_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0028_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.2078310878441, + "lat": -0.41645728676309596 + }, + "bbox": [ + 34.18534745377296, + -0.4389403269110642, + 34.230314721915235, + -0.3939742466151277 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0028_label_positive_jitter_packet.png", + "sha256": "c4d7700e03f5b855de8325cc982f3c863dc44953de8dec75c1db56da44fcd329", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0028_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0028_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0028_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0028_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0028_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0028_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0028_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 46.8133, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.4773, + "max": 5.0241, + "mean": 4.4284, + "median": 4.6273, + "p90": 4.8781 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 114787, + "min": 0.0, + "max": 63.8014, + "mean": 14.2691, + "median": 7.0748, + "p90": 39.92 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 95, + "schools_waterpoints": 8, + "urban_landuse": 6681, + "water_surface": 3, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0031_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0031_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..428e1442d1a59f6fa3e7a0b15e11deacd896e60c --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0031_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0031_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.20742163523897, + "lat": -0.42028775771217325 + }, + "bbox": [ + 34.18493799019183, + -0.4427707978601415, + 34.22990528028612, + -0.397804717564205 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0031_label_positive_jitter_packet.png", + "sha256": "f2bf836b048b7cb1508b0e77423290ab7d6a542efa10db17c786d59b5f5e3e3e", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0031_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0031_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0031_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0031_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0031_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0031_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0031_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 46.5161, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.7562, + "max": 5.0617, + "mean": 4.5195, + "median": 4.6627, + "p90": 4.9167 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 118088, + "min": 0.0, + "max": 63.8839, + "mean": 16.7813, + "median": 9.2857, + "p90": 41.4673 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 97, + "schools_waterpoints": 8, + "urban_landuse": 7230, + "water_surface": 4, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0032_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0032_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..44bba1ca330602935fff06171bb438e8383beebc --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0032_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0032_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.25132638650755, + "lat": -0.4367898527171438 + }, + "bbox": [ + 34.22884269302541, + -0.4592728928651121, + 34.27381007998969, + -0.41430681256917556 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0032_label_positive_jitter_packet.png", + "sha256": "554acd70eb450345012381bc7e187d8bf7d1b93d421caa3b12ca883c558b562e", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0032_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0032_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0032_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0032_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0032_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0032_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0032_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 43.5723, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 1.3263, + "max": 4.6932, + "mean": 3.794, + "median": 4.0154, + "p90": 4.5116 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 100599, + "min": 0.0, + "max": 34.4572, + "mean": 3.3456, + "median": 2.2704, + "p90": 7.0743 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 17, + "schools_waterpoints": 0, + "urban_landuse": 2316, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 11, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0033_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0033_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..c689c5f2d017e16fb0b70cb4c12d73a9d1b9fb12 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0033_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0033_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.20873450277202, + "lat": -0.42360775163695075 + }, + "bbox": [ + 34.18625084813031, + -0.446090791784919, + 34.23121815741373, + -0.4011247114889825 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0033_label_positive_jitter_packet.png", + "sha256": "fd6bbad99c549b4c28a2340d3d71ac8f79ad96c7c9a0e88dcbc3204f12c54028", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0033_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0033_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0033_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0033_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0033_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0033_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0033_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 45.9015, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 3.074, + "max": 5.0848, + "mean": 4.6005, + "median": 4.6797, + "p90": 4.9397 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 116567, + "min": 0.0, + "max": 63.866, + "mean": 19.1793, + "median": 14.8411, + "p90": 41.5822 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 106, + "schools_waterpoints": 8, + "urban_landuse": 7619, + "water_surface": 3, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0034_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0034_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..491bc462d331b51dddc0f00461738c0b9b37cca8 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0034_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0034_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.23879693743054, + "lat": -0.4254047483158059 + }, + "bbox": [ + 34.21631327756414, + -0.44788778846377414, + 34.261280597296945, + -0.4029217081678376 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0034_label_positive_jitter_packet.png", + "sha256": "17df5a79cf8a0ca29461b1995e7a1d7287256f17b6688bf63c635d9871249946", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0034_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0034_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0034_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0034_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0034_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0034_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0034_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 41.5837, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.8829, + "max": 4.9297, + "mean": 4.3641, + "median": 4.4368, + "p90": 4.7243 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 59703, + "min": 0.0, + "max": 50.9581, + "mean": 8.6149, + "median": 4.5218, + "p90": 26.079 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 16, + "schools_waterpoints": 0, + "urban_landuse": 2108, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 11, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0035_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0035_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..7048069b10d175559676abd107991e405ee31046 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0035_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0035_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.20897544925092, + "lat": -0.4190362430799468 + }, + "bbox": [ + 34.18649180780098, + -0.44151928322791506, + 34.23145909070087, + -0.39655320293197854 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0035_label_positive_jitter_packet.png", + "sha256": "aaa01623a11dd49f2f573cddd55141de99d586b2a904a706cf8217c8c0b744eb", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0035_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0035_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0035_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0035_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0035_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0035_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0035_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 46.5391, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.738, + "max": 5.0413, + "mean": 4.5021, + "median": 4.6465, + "p90": 4.8963 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 113442, + "min": 0.0, + "max": 63.8044, + "mean": 16.3557, + "median": 8.8456, + "p90": 41.8586 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 96, + "schools_waterpoints": 8, + "urban_landuse": 6988, + "water_surface": 3, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0037_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0037_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..8785ee6fbfad65f80f160daf5373c68011bb699a --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0037_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0037_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.21040907321742, + "lat": -0.42251247640529654 + }, + "bbox": [ + 34.18792542174933, + -0.4449955165532648, + 34.23289272468551, + -0.4000294362573283 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0037_label_positive_jitter_packet.png", + "sha256": "a6b3bac50222f02257312d176693c5438c5e0f84e5cc0dfbdd2896ab910ea65c", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0037_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0037_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0037_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0037_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0037_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0037_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0037_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 46.0912, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 3.0634, + "max": 5.0649, + "mean": 4.5827, + "median": 4.6657, + "p90": 4.9199 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 113004, + "min": 0.0, + "max": 63.874, + "mean": 19.1382, + "median": 14.698, + "p90": 41.8698 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 100, + "schools_waterpoints": 8, + "urban_landuse": 7353, + "water_surface": 3, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0038_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0038_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..251bbabb0ba1c124dfaa1a7f7b23a99aa35550d4 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0038_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0038_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.29744893715967, + "lat": -0.47931890033743735 + }, + "bbox": [ + 34.274965110253014, + -0.5018019404854056, + 34.31993276406633, + -0.4568358601894691 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0038_label_positive_jitter_packet.png", + "sha256": "f15d989a4b9ffddeda0238a37e9a08bfd03e7cd7ccafe2eee7356f7d01373ea6", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0038_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0038_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0038_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0038_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0038_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0038_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0038_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 49.3519, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0002, + "max": 4.3565, + "mean": 1.8721, + "median": 1.7891, + "p90": 3.4564 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 163693, + "min": 0.0, + "max": 32.7847, + "mean": 3.6602, + "median": 2.1329, + "p90": 8.9045 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 48, + "schools_waterpoints": 4, + "urban_landuse": 3070, + "water_surface": 0, + "waterways": 7 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 20, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0039_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0039_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..fc16a144fcaea2893f2aff6fc84e2f92147ca308 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0039_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0039_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.2201127632611, + "lat": -0.4409146858593472 + }, + "bbox": [ + 34.197629057380844, + -0.46339772600731544, + 34.242596469141354, + -0.4184316457113789 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0039_label_positive_jitter_packet.png", + "sha256": "807c2b01c2bd6ce75bd8dd28634eef80a6102a82f3b69fc854e08943ce1d03d9", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0039_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0039_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0039_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0039_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0039_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0039_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0039_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 45.8924, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 3.5793, + "max": 5.179, + "mean": 4.7108, + "median": 4.7726, + "p90": 5.0337 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 159310, + "min": 0.0, + "max": 63.84, + "mean": 12.9964, + "median": 5.9369, + "p90": 38.2005 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 96, + "schools_waterpoints": 4, + "urban_landuse": 6510, + "water_surface": 0, + "waterways": 1 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 30, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0040_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0040_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..a5440dbd5f359f07fde539ed5b957e8aac956ed2 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0040_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0040_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.20488005971393, + "lat": -0.42332806608042417 + }, + "bbox": [ + 34.1823964058834, + -0.44581110622839243, + 34.227363713544456, + -0.4008450259324559 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0040_label_positive_jitter_packet.png", + "sha256": "4f8cb3754632539a9436b90fc6ba75738d6b3b7487cad61d3215ad80e12e488c", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0040_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0040_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0040_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0040_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0040_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0040_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0040_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 45.7017, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.8864, + "max": 5.1042, + "mean": 4.5772, + "median": 4.6972, + "p90": 4.9591 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 122612, + "min": 0.0, + "max": 63.8922, + "mean": 18.1958, + "median": 12.415, + "p90": 41.1307 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 110, + "schools_waterpoints": 9, + "urban_landuse": 7764, + "water_surface": 11, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0041_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0041_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..4874fa12df440cad5bf689f5744d9f359bfe7d6c --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0041_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0041_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.28951482290267, + "lat": -0.49204833907913553 + }, + "bbox": [ + 34.267030953651364, + -0.5145313792271038, + 34.31199869215397, + -0.4695652989311673 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0041_label_positive_jitter_packet.png", + "sha256": "18c86ac6820f5fb7e984c687ac5161e6c9511c1a812db2dc559750fa90fe69ec", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0041_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0041_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0041_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0041_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0041_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0041_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0041_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 48.7192, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0005, + "max": 3.4762, + "mean": 0.9589, + "median": 0.7331, + "p90": 2.1815 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 196044, + "min": 0.0002, + "max": 32.9038, + "mean": 3.7262, + "median": 2.3088, + "p90": 8.9846 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 59, + "schools_waterpoints": 4, + "urban_landuse": 3509, + "water_surface": 0, + "waterways": 8 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 18, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0042_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0042_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..4485640d71708747241e560009dfa2949da3fd67 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0042_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0042_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.290288167354205, + "lat": -0.4723972192289258 + }, + "bbox": [ + 34.26780436300675, + -0.49488025937689406, + 34.31277197170166, + -0.44991417908095754 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0042_label_positive_jitter_packet.png", + "sha256": "cf58ca92c371948615f98be59c47dcf2cadd7e1bce5dde98b9f9f0c95293524e", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0042_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0042_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0042_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0042_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0042_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0042_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0042_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 48.3937, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0025, + "max": 4.0765, + "mean": 1.7456, + "median": 1.7356, + "p90": 3.1971 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 137519, + "min": 0.0, + "max": 26.1168, + "mean": 2.6994, + "median": 1.8176, + "p90": 7.021 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 46, + "schools_waterpoints": 0, + "urban_landuse": 2456, + "water_surface": 0, + "waterways": 7 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 20, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0044_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0044_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..53fbab2bfe24e340e3d678f2b0d6d30082960da7 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0044_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0044_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.20593349763042, + "lat": -0.42155016333244955 + }, + "bbox": [ + 34.1834498489439, + -0.4440332034804178, + 34.228417146316936, + -0.3990671231844813 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0044_label_positive_jitter_packet.png", + "sha256": "dd3cb2472cbc1e631ce47901a66e8e8c1233780de098b80d7735fd0b04b5b742", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0044_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0044_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0044_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0044_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0044_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0044_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0044_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 46.2797, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.7862, + "max": 5.0818, + "mean": 4.5396, + "median": 4.6773, + "p90": 4.9368 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 121328, + "min": 0.0, + "max": 63.8854, + "mean": 17.3082, + "median": 9.9947, + "p90": 41.2079 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 104, + "schools_waterpoints": 8, + "urban_landuse": 7490, + "water_surface": 11, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0046_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0046_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..d3a3a18b7abb7fcd9eb5576e88073bd4ec4fb48d --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0046_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0046_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.26699481191746, + "lat": -0.4395728025055648 + }, + "bbox": [ + 34.24451111008333, + -0.46205584265353306, + 34.2894785137516, + -0.41708976235759654 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0046_label_positive_jitter_packet.png", + "sha256": "bd3bd993057dfcfa6006849221f9dd0d03878f4ea2ce64228fb0f57ca54cb4b9", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0046_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0046_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0046_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0046_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0046_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0046_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0046_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 45.7482, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 1.0179, + "max": 4.3983, + "mean": 3.2521, + "median": 3.4038, + "p90": 4.1553 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 76213, + "min": 0.0, + "max": 10.1274, + "mean": 2.4223, + "median": 1.8905, + "p90": 5.7973 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 15, + "schools_waterpoints": 0, + "urban_landuse": 1584, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 6, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0047_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0047_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..44eaf1cd99adc101976cc18ca7b075f7ccaf3557 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0047_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0047_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.23632633657163, + "lat": -0.4404229081539732 + }, + "bbox": [ + 34.21384263217564, + -0.4629059483019415, + 34.25881004096762, + -0.41793986800600497 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0047_label_positive_jitter_packet.png", + "sha256": "50d638277a642b8f4e1f4fa027e152e01d09fe686712d901a8ad364a4c530765", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0047_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0047_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0047_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0047_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0047_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0047_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0047_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 44.1505, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.2706, + "max": 5.0816, + "mean": 4.2772, + "median": 4.4029, + "p90": 4.8937 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 141233, + "min": 0.0, + "max": 57.3162, + "mean": 6.3077, + "median": 2.7482, + "p90": 17.3333 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 31, + "schools_waterpoints": 0, + "urban_landuse": 3679, + "water_surface": 0, + "waterways": 1 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 11, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0049_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0049_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..2767eef42859f1d35d5cc839f486f9d3e6588e98 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0049_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0049_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.25479926903227, + "lat": -0.43133564815730613 + }, + "bbox": [ + 34.23231559176504, + -0.4538186883052744, + 34.2772829462995, + -0.40885260800933787 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0049_label_positive_jitter_packet.png", + "sha256": "a0286b0e208951e18ab3180ebedb8d1c5cf66f59d70748bca5b22c57d44087d7", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0049_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0049_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0049_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0049_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0049_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0049_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0049_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 42.8739, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 1.6626, + "max": 4.5996, + "mean": 3.836, + "median": 4.0295, + "p90": 4.4492 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 61611, + "min": 0.0, + "max": 33.6211, + "mean": 3.3027, + "median": 2.489, + "p90": 7.0176 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 11, + "schools_waterpoints": 0, + "urban_landuse": 1713, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 11, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0050_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0050_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..058e6454cc1e5c8418296cb4f98053b2f78de0e7 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0050_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0050_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.21186897675789, + "lat": -0.4130418340854451 + }, + "bbox": [ + 34.18938535238879, + -0.43552487423341335, + 34.23435260112699, + -0.39055879393747683 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0050_label_positive_jitter_packet.png", + "sha256": "a49821ee7a577ecab88ba5fa311d43b8cfa881b6cd2985432278af3a6bdbe0e4", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0050_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0050_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0050_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0050_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0050_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0050_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0050_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 45.8844, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.469, + "max": 4.9696, + "mean": 4.3977, + "median": 4.5924, + "p90": 4.8151 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 97320, + "min": 0.0, + "max": 63.7, + "mean": 13.4111, + "median": 7.109, + "p90": 37.4097 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 76, + "schools_waterpoints": 7, + "urban_landuse": 5588, + "water_surface": 4, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0052_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0052_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..baf328ecb35b17b6a876c94cd80f5b32d6d979af --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0052_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0052_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.27966065980618, + "lat": -0.4900711045855889 + }, + "bbox": [ + 34.25717679720499, + -0.5125541447335572, + 34.302144522407374, + -0.46758806443762063 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0052_label_positive_jitter_packet.png", + "sha256": "257c7cce4e56df3f194e23337539bfcf107955ad46eb7fdc2733838a808af6e6", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0052_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0052_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0052_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0052_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0052_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0052_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0052_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 47.9869, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.001, + "max": 2.744, + "mean": 0.7917, + "median": 0.6704, + "p90": 1.6343 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 191639, + "min": 0.0002, + "max": 14.2845, + "mean": 2.5587, + "median": 1.8783, + "p90": 6.6479 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 50, + "schools_waterpoints": 0, + "urban_landuse": 2803, + "water_surface": 1, + "waterways": 8 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 18, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0053_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0053_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..369a168c4d8949ea1bab71a4aa92b13fbf14b7c2 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0053_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0053_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.21138157711269, + "lat": -0.431257758296632 + }, + "bbox": [ + 34.188897900075546, + -0.45374079844460025, + 34.23386525414983, + -0.40877471814866373 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0053_label_positive_jitter_packet.png", + "sha256": "3db68ea28b3303f5ea756436fc91cdeafbfcae5ec04d9aeece41b0a7b5d96107", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0053_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0053_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0053_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0053_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0053_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0053_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0053_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 45.6834, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 3.7289, + "max": 5.1401, + "mean": 4.7309, + "median": 4.7614, + "p90": 4.9949 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 122695, + "min": 0.0, + "max": 63.9059, + "mean": 19.2836, + "median": 15.1966, + "p90": 41.1252 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 101, + "schools_waterpoints": 6, + "urban_landuse": 7483, + "water_surface": 3, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 32, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0054_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0054_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..d6cdbf32d14b904cfe7c5d97b61ea41d710e1f0f --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0054_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0054_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.20212050211542, + "lat": -0.4220812232271104 + }, + "bbox": [ + 34.17963685189466, + -0.44456426337507865, + 34.224604152336184, + -0.39959818307914213 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0054_label_positive_jitter_packet.png", + "sha256": "50e70dae86fb3f56a598e6941dadd1f25948dae183d8094ea1359fd0ce4ccf0b", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0054_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0054_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0054_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0054_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0054_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0054_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0054_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 46.0762, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.6556, + "max": 5.1084, + "mean": 4.5231, + "median": 4.6785, + "p90": 4.9634 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 129589, + "min": 0.0, + "max": 63.8058, + "mean": 16.6536, + "median": 8.9347, + "p90": 40.7103 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 117, + "schools_waterpoints": 9, + "urban_landuse": 7796, + "water_surface": 12, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0055_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0055_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..897844d10e93de15334bba65fa9d57e7ce2aa4a2 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0055_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0055_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.213193312720406, + "lat": -0.4160619041699285 + }, + "bbox": [ + 34.190709679776496, + -0.43854494431789676, + 34.235676945664316, + -0.39357886402196024 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0055_label_positive_jitter_packet.png", + "sha256": "5afeb78a98930126faed5e0de13964e04f868068f7f66facdf370499b0f6a74e", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0055_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0055_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0055_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0055_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0055_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0055_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0055_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 45.7705, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.7567, + "max": 4.9899, + "mean": 4.4738, + "median": 4.6084, + "p90": 4.8435 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 96593, + "min": 0.0, + "max": 63.805, + "mean": 15.7087, + "median": 8.6179, + "p90": 41.1231 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 75, + "schools_waterpoints": 8, + "urban_landuse": 5965, + "water_surface": 3, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0056_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0056_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..5138f068ed80f768cdc7c30554f8546e38efb947 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0056_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0056_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.29052022636628, + "lat": -0.47324487860353176 + }, + "bbox": [ + 34.26803641927376, + -0.4957279187515, + 34.3130040334588, + -0.4507618384555635 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0056_label_positive_jitter_packet.png", + "sha256": "2dc05bf4f61b47061e74b213cc30a66a2f81fd7eaefe1eb5991dc2f607338f5d", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0056_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0056_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0056_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0056_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0056_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0056_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0056_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 48.4456, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0008, + "max": 4.0666, + "mean": 1.7194, + "median": 1.6989, + "p90": 3.1792 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 140959, + "min": 0.0, + "max": 25.5909, + "mean": 2.8152, + "median": 1.8706, + "p90": 7.2956 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 48, + "schools_waterpoints": 1, + "urban_landuse": 2545, + "water_surface": 0, + "waterways": 7 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 20, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0058_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0058_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..d2e0b90447ba69f62f22cd5e29b18f7e98f2583e --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0058_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0058_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.241990584176094, + "lat": -0.44576271483200136 + }, + "bbox": [ + 34.219506863575006, + -0.4682457549799696, + 34.26447430477718, + -0.4232796746840331 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0058_label_positive_jitter_packet.png", + "sha256": "0f430ecd3694954c99327b2e24ed5b4963944e28c8e7ec567f042f49de3d0bb9", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0058_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0058_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0058_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0058_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0058_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0058_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0058_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 44.6112, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 1.4907, + "max": 5.098, + "mean": 3.9706, + "median": 4.1266, + "p90": 4.8211 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 163026, + "min": 0.0, + "max": 47.9293, + "mean": 3.8653, + "median": 2.114, + "p90": 8.0503 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 29, + "schools_waterpoints": 0, + "urban_landuse": 3101, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 11, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0059_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0059_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..a4ee82f5b797a6415a537aedcc41e42b8147e2a7 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0059_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0059_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.28894965540445, + "lat": -0.4774909440779737 + }, + "bbox": [ + 34.26646583448738, + -0.49997398422594197, + 34.311433476321525, + -0.45500790393000545 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0059_label_positive_jitter_packet.png", + "sha256": "4d3e5b96ce3368f63b1f8b17a8573eef1391d02a60360e3d37c5a63624d4cd69", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0059_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0059_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0059_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0059_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0059_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0059_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0059_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 48.2906, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0012, + "max": 3.8531, + "mean": 1.4676, + "median": 1.3874, + "p90": 2.8734 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 159887, + "min": 0.0, + "max": 33.0479, + "mean": 3.1775, + "median": 2.015, + "p90": 7.8784 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 52, + "schools_waterpoints": 2, + "urban_landuse": 2834, + "water_surface": 0, + "waterways": 7 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 20, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0060_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0060_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..58e8402d7f77bde81acb37bf77f73259ec7eba26 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0060_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0060_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.21037348658384, + "lat": -0.4192992632471651 + }, + "bbox": [ + 34.187889844378795, + -0.44178230339513336, + 34.232857128788886, + -0.39681622309919684 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0060_label_positive_jitter_packet.png", + "sha256": "729f48f2d2afdbf5fc6bee4686f7c93e2c68b0006eea29e9426594c3e85afd4c", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0060_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0060_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0060_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0060_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0060_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0060_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0060_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 46.4268, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.8296, + "max": 5.0357, + "mean": 4.5179, + "median": 4.6424, + "p90": 4.8908 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 109992, + "min": 0.0, + "max": 63.8185, + "mean": 16.9534, + "median": 9.6334, + "p90": 42.1254 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 89, + "schools_waterpoints": 8, + "urban_landuse": 6858, + "water_surface": 3, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0062_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0062_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..a96262aeeb5a8ac1028cb82be96d6fd3f97015c0 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0062_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0062_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.21791739184091, + "lat": -0.415224172598567 + }, + "bbox": [ + 34.19543376128181, + -0.43770721274653523, + 34.240401022400015, + -0.3927411324505987 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0062_label_positive_jitter_packet.png", + "sha256": "6cace18fceb6da05387197b7ac3b759c52a50d5f7fcf8649673338beba98b0db", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0062_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0062_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0062_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0062_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0062_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0062_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0062_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 44.2594, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.9817, + "max": 4.9553, + "mean": 4.4929, + "median": 4.5847, + "p90": 4.8077 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 79343, + "min": 0.0, + "max": 63.8275, + "mean": 16.3322, + "median": 8.8288, + "p90": 42.1014 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 69, + "schools_waterpoints": 5, + "urban_landuse": 5174, + "water_surface": 3, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 25, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0063_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0063_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..c38de2d25572b8f8d493ba74d3b185d7f520c3fb --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0063_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0063_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.20145093938388, + "lat": -0.4268877957837131 + }, + "bbox": [ + 34.17896727518892, + -0.44937083593168137, + 34.22393460357885, + -0.40440475563574485 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0063_label_positive_jitter_packet.png", + "sha256": "c6b617249dd6eafa925c4a73a4d50ec08ddadda731ee6e4632fce5a54885e75f", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0063_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0063_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0063_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0063_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0063_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0063_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0063_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 44.1358, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 3.0624, + "max": 5.1566, + "mean": 4.6507, + "median": 4.7851, + "p90": 5.0114 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 125442, + "min": 0.0, + "max": 63.8918, + "mean": 18.6693, + "median": 14.3931, + "p90": 40.9472 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 112, + "schools_waterpoints": 8, + "urban_landuse": 7890, + "water_surface": 12, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0064_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0064_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..f58f9da7ec74efed65b560a9c2d3ea5a12fc8299 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0064_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0064_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.21019379279135, + "lat": -0.42077032936355213 + }, + "bbox": [ + 34.1877101463543, + -0.4432533695115204, + 34.232677439228404, + -0.3982872892155839 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0064_label_positive_jitter_packet.png", + "sha256": "5cd4f3a63aa738a08023c1ba37f49790cb1da3f36e7cd2b9e3cc5963c4209def", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0064_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0064_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0064_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0064_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0064_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0064_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0064_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 46.3225, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.9282, + "max": 5.0503, + "mean": 4.5475, + "median": 4.6541, + "p90": 4.9053 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 111895, + "min": 0.0, + "max": 63.8208, + "mean": 17.9712, + "median": 11.2756, + "p90": 41.9786 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 96, + "schools_waterpoints": 8, + "urban_landuse": 7104, + "water_surface": 3, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0065_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0065_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..82af19c64d3781e6a994062d3825de9e85c1cb94 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0065_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0065_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.28318580347989, + "lat": -0.4791935712616767 + }, + "bbox": [ + 34.26070197698462, + -0.501676611409645, + 34.30566962997516, + -0.45671053111370846 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0065_label_positive_jitter_packet.png", + "sha256": "acc5dfeda495bcdd7d1d9da0862b67e8df0200bf5650521bb73211e9b209466a", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0065_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0065_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0065_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0065_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0065_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0065_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0065_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 47.6025, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0014, + "max": 3.4271, + "mean": 1.2117, + "median": 1.114, + "p90": 2.344 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 167913, + "min": 0.0, + "max": 27.1274, + "mean": 2.7092, + "median": 1.9878, + "p90": 6.7248 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 53, + "schools_waterpoints": 1, + "urban_landuse": 2714, + "water_surface": 0, + "waterways": 7 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 20, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0068_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0068_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..79abbe3f13248629dceacd8893423f74b21a14b5 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0068_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0068_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.30449504578739, + "lat": -0.4745225471450892 + }, + "bbox": [ + 34.28201123454796, + -0.49700558729305744, + 34.32697885702682, + -0.4520395069971209 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0068_label_positive_jitter_packet.png", + "sha256": "4140175424ef822163ec9189faf76b14be14888e248c15344041f4515506337e", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0068_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0068_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0068_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0068_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0068_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0068_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0068_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 48.3051, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.3557, + "max": 4.7465, + "mean": 2.5892, + "median": 2.5594, + "p90": 4.1725 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 148882, + "min": 0.0, + "max": 27.3376, + "mean": 2.9042, + "median": 1.9747, + "p90": 6.9156 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 40, + "schools_waterpoints": 1, + "urban_landuse": 2669, + "water_surface": 0, + "waterways": 7 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 18, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0069_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0069_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..64f86a41db2f0448276f1c01b65bfb8218bd9b66 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0069_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0069_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.23916053181647, + "lat": -0.4372072951771958 + }, + "bbox": [ + 34.21667683708491, + -0.45969033532516407, + 34.26164422654802, + -0.41472425502922755 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0069_label_positive_jitter_packet.png", + "sha256": "15778a12ec64f03cff59734fd3845482722ec1663ee1f38be38127b3547f3544", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0069_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0069_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0069_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0069_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0069_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0069_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0069_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 43.8758, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.2162, + "max": 5.0358, + "mean": 4.2235, + "median": 4.3471, + "p90": 4.8176 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 121624, + "min": 0.0, + "max": 48.1831, + "mean": 5.678, + "median": 2.6724, + "p90": 14.7489 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 25, + "schools_waterpoints": 0, + "urban_landuse": 3116, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 11, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0070_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0070_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..f81eda661fe4588c513dad194780911e2b4df1ba --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0070_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0070_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.248133476799715, + "lat": -0.4529561196082545 + }, + "bbox": [ + 34.22564973405951, + -0.47543915975622275, + 34.27061721953992, + -0.43047307946028623 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0070_label_positive_jitter_packet.png", + "sha256": "56efc1b3058f5461c1618285043c933168732b96597defd1c9c0d86cd9173aaf", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0070_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0070_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0070_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0070_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0070_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0070_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0070_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 45.3913, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.4508, + "max": 5.0578, + "mean": 3.4454, + "median": 3.6072, + "p90": 4.5968 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 196358, + "min": 0.0, + "max": 34.7049, + "mean": 2.7225, + "median": 1.9199, + "p90": 5.9103 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 35, + "schools_waterpoints": 0, + "urban_landuse": 3169, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 11, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0071_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0071_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..63de212fc48c9c394d4229d95bef43a84fc20bc7 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0071_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0071_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.2084785764613, + "lat": -0.42154181084457804 + }, + "bbox": [ + 34.1859949277989, + -0.4440248509925463, + 34.230962225123704, + -0.3990587706966098 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0071_label_positive_jitter_packet.png", + "sha256": "d4c4e716d3ce10fe685eff2528aaac5022bafcac30407c16fb740d96da639b3c", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0071_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0071_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0071_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0071_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0071_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0071_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0071_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 46.2509, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.9045, + "max": 5.0672, + "mean": 4.5551, + "median": 4.6675, + "p90": 4.9222 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 115936, + "min": 0.0, + "max": 63.882, + "mean": 17.9619, + "median": 11.3267, + "p90": 41.6423 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 101, + "schools_waterpoints": 8, + "urban_landuse": 7346, + "water_surface": 3, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0072_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0072_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..1f1c1a5e9e9b935994a8963784433b6a5e066fe1 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0072_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0072_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.19928125769055, + "lat": -0.4150237128815087 + }, + "bbox": [ + 34.1767976277014, + -0.43750675302947695, + 34.221764887679704, + -0.39254067273354043 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0072_label_positive_jitter_packet.png", + "sha256": "bcfb5d6ee928a6a7c79ed9ef4fae8bf5413bdd5013547e4e6099c0070e019f96", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0072_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0072_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0072_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0072_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0072_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0072_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0072_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 48.6743, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 1.8528, + "max": 5.0596, + "mean": 4.248, + "median": 4.4563, + "p90": 4.9111 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 149825, + "min": 0.0, + "max": 63.8772, + "mean": 10.811, + "median": 4.7596, + "p90": 34.8151 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 118, + "schools_waterpoints": 8, + "urban_landuse": 7223, + "water_surface": 12, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0076_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0076_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..965919b0226eb3350cfbc2f17d1770a4bef31c3e --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0076_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0076_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.28558030126261, + "lat": -0.47133811676910536 + }, + "bbox": [ + 34.263096500338044, + -0.4938211569170736, + 34.30806410218718, + -0.4488550766211371 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0076_label_positive_jitter_packet.png", + "sha256": "b066a7d5377e8293bec5b0c5caedb293fa11419ecbd46323e096c60e0fdd1bdd", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0076_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0076_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0076_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0076_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0076_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0076_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0076_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 47.69, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0004, + "max": 3.8478, + "mean": 1.6048, + "median": 1.5905, + "p90": 2.9023 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 140864, + "min": 0.0, + "max": 25.8486, + "mean": 2.5578, + "median": 1.8187, + "p90": 6.4895 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 50, + "schools_waterpoints": 0, + "urban_landuse": 2472, + "water_surface": 0, + "waterways": 7 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 20, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0077_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0077_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..6e443da20ea1feb86ee484d0b2ae40ad39a03c73 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0077_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0077_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.29307194131956, + "lat": -0.4714886034978676 + }, + "bbox": [ + 34.27058813990911, + -0.49397164364583585, + 34.31555574273001, + -0.44900556334989933 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0077_label_positive_jitter_packet.png", + "sha256": "fc9dee8091b1a8cc008acfc3ed4d97b80eba3053abdc90e717f05e8f31b61f8d", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0077_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0077_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0077_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0077_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0077_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0077_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0077_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 48.7451, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0011, + "max": 4.2541, + "mean": 1.9328, + "median": 1.9435, + "p90": 3.4352 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 129867, + "min": 0.0, + "max": 25.3965, + "mean": 2.5721, + "median": 1.7099, + "p90": 6.8774 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 41, + "schools_waterpoints": 0, + "urban_landuse": 2230, + "water_surface": 0, + "waterways": 7 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 20, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0079_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0079_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..aa887ad086691cce16ea4aab44f80ebf6e88f4a5 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0079_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0079_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.235198892930676, + "lat": -0.42289633012595823 + }, + "bbox": [ + 34.21271524035129, + -0.4453793702739265, + 34.257682545510065, + -0.40041328997799 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0079_label_positive_jitter_packet.png", + "sha256": "fc5415d40aa53feefd6e8f954a932f8f2869719ec15e81b8eb2e72f89f1188fb", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0079_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0079_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0079_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0079_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0079_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0079_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0079_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 40.9642, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 3.2013, + "max": 4.9272, + "mean": 4.442, + "median": 4.4922, + "p90": 4.7523 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 52790, + "min": 0.0, + "max": 57.4756, + "mean": 11.2281, + "median": 4.6616, + "p90": 36.0551 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 20, + "schools_waterpoints": 0, + "urban_landuse": 2180, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 11, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0080_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0080_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..4c20e237659798315869638337bdbfe49b7df3a7 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0080_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0080_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.20360272315508, + "lat": -0.42246772130587235 + }, + "bbox": [ + 34.1811190718165, + -0.4449507614538406, + 34.22608637449366, + -0.3999846811579041 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0080_label_positive_jitter_packet.png", + "sha256": "37365bc715a077808689165ed5ff2605a3b7e2c2b4f9d95d441ce35edff4791e", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0080_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0080_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0080_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0080_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0080_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0080_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0080_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 45.9032, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.7582, + "max": 5.1037, + "mean": 4.5467, + "median": 4.6891, + "p90": 4.9586 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 125593, + "min": 0.0, + "max": 63.8362, + "mean": 17.395, + "median": 10.1792, + "p90": 40.915 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 112, + "schools_waterpoints": 9, + "urban_landuse": 7764, + "water_surface": 11, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0081_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0081_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..043fc3cbbc08bfc2d566a14544ecc92b4e29994f --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0081_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0081_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.264180336154894, + "lat": -0.45071935005491104 + }, + "bbox": [ + 34.24169660033676, + -0.4732023902028793, + 34.28666407197303, + -0.4282363099069428 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0081_label_positive_jitter_packet.png", + "sha256": "033b9326d3815fc740963a1f80f64518f8a99271ed01205660184f3eb37471d7", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0081_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0081_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0081_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0081_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0081_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0081_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0081_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 45.4115, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.1462, + "max": 4.3506, + "mean": 2.7275, + "median": 2.896, + "p90": 3.8429 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 141132, + "min": 0.0, + "max": 10.1182, + "mean": 2.1056, + "median": 1.7416, + "p90": 4.6716 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 29, + "schools_waterpoints": 0, + "urban_landuse": 2174, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 8, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0082_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0082_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..ae16239c0a8fe43df8227a82b6efa8e5a45f54a5 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0082_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0082_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.21915762968731, + "lat": -0.41903389924191126 + }, + "bbox": [ + 34.19667398824409, + -0.4415169393898795, + 34.241641271130526, + -0.396550859093943 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0082_label_positive_jitter_packet.png", + "sha256": "90c6322da1c3e683cf8c13b4c4f985e03291433feda7f9354f202ad9bac32b30", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0082_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0082_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0082_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0082_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0082_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0082_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0082_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 44.786, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 3.2656, + "max": 4.9832, + "mean": 4.5445, + "median": 4.5985, + "p90": 4.8384 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 87170, + "min": 0.0, + "max": 63.8151, + "mean": 18.696, + "median": 11.8372, + "p90": 44.786 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 78, + "schools_waterpoints": 5, + "urban_landuse": 5944, + "water_surface": 3, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 30, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0086_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0086_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..054fe77628011ca2e8feff3e69d5065a16622472 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0086_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0086_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.28400558305914, + "lat": -0.48007996644266543 + }, + "bbox": [ + 34.261521753651984, + -0.5025630065906337, + 34.3064894124663, + -0.45759692629469717 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0086_label_positive_jitter_packet.png", + "sha256": "83e842c612a4053c2e23cd122d18eb83aea472ca4ab0670908a2c9b4285b6fa9", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0086_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0086_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0086_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0086_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0086_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0086_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0086_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 47.6429, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 3.4489, + "mean": 1.1976, + "median": 1.0882, + "p90": 2.36 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 169044, + "min": 0.0, + "max": 27.1999, + "mean": 2.8351, + "median": 2.0553, + "p90": 7.0044 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 56, + "schools_waterpoints": 1, + "urban_landuse": 2801, + "water_surface": 1, + "waterways": 7 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 20, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0087_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0087_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..355dbd77beccf6e019044c690011bf2d7dafa28d --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0087_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0087_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.206990551799514, + "lat": -0.4232569488479394 + }, + "bbox": [ + 34.184506898175165, + -0.44573998899590767, + 34.22947420542386, + -0.40077390869997115 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0087_label_positive_jitter_packet.png", + "sha256": "c61804dd3e221f03792bf157ec2533be7c56f5a7fa57abeeb1985a986b332236", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0087_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0087_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0087_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0087_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0087_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0087_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0087_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 45.8515, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.9718, + "max": 5.0915, + "mean": 4.5864, + "median": 4.6851, + "p90": 4.9464 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 118966, + "min": 0.0, + "max": 63.9045, + "mean": 18.6314, + "median": 13.5495, + "p90": 41.3901 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 108, + "schools_waterpoints": 8, + "urban_landuse": 7657, + "water_surface": 6, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0089_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0089_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..29acfb648ac49a00162814a227da53945c0581ea --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0089_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0089_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.248024834326266, + "lat": -0.4380574014739996 + }, + "bbox": [ + 34.225541137046626, + -0.46054044162196783, + 34.270508531605905, + -0.4155743613260313 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0089_label_positive_jitter_packet.png", + "sha256": "b85646b18ff8f31d2e23f90a058c1e4e4e9aee28a9bbf0216ba30535497db5a9", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0089_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0089_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0089_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0089_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0089_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0089_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0089_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 43.7315, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 1.4849, + "max": 4.9513, + "mean": 3.8878, + "median": 4.0835, + "p90": 4.602 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 114991, + "min": 0.0, + "max": 34.7641, + "mean": 3.5278, + "median": 2.326, + "p90": 7.4308 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 19, + "schools_waterpoints": 0, + "urban_landuse": 2507, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 11, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0090_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0090_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..920e98bf721e3ccb6b0d24638e1c58bc75f835da --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0090_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0090_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.205823986810444, + "lat": -0.4262894157737077 + }, + "bbox": [ + 34.183340324363776, + -0.448772455921676, + 34.22830764925711, + -0.40380637562573946 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0090_label_positive_jitter_packet.png", + "sha256": "a744198ff6f6aa65ffc9f733097378850cd8b1a183f9896720d8554ef5e77d60", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0090_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0090_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0090_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0090_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0090_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0090_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0090_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 44.9225, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 3.1703, + "max": 5.1261, + "mean": 4.6508, + "median": 4.741, + "p90": 4.981 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 120846, + "min": 0.0, + "max": 63.8218, + "mean": 19.3732, + "median": 15.7988, + "p90": 41.2395 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 104, + "schools_waterpoints": 8, + "urban_landuse": 7667, + "water_surface": 11, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0092_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0092_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..46928fe0dd502fef8708e5f14201adedcaa6bea1 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0092_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0092_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.20739311732253, + "lat": -0.41689254948171695 + }, + "bbox": [ + 34.18490948200923, + -0.4393755896296852, + 34.22987675263583, + -0.3944095093337487 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0092_label_positive_jitter_packet.png", + "sha256": "4b69a56d1eda3a68fa9cfe1b7b9532f2a24bf06566b3952b57f445d75ab81d7e", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0092_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0092_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0092_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0092_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0092_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0092_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0092_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 46.8461, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.4867, + "max": 5.0306, + "mean": 4.4344, + "median": 4.6322, + "p90": 4.885 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 116467, + "min": 0.0, + "max": 63.7981, + "mean": 14.4531, + "median": 7.1352, + "p90": 40.1564 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 98, + "schools_waterpoints": 7, + "urban_landuse": 6824, + "water_surface": 4, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0093_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0093_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..6979fb9b1d4dead62d48fb7948492a4682b47398 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0093_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0093_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.24913420259467, + "lat": -0.43239768336736334 + }, + "bbox": [ + 34.22665052218607, + -0.4548807235153316, + 34.271617883003266, + -0.4099146432193951 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0093_label_positive_jitter_packet.png", + "sha256": "2d7e2a4b04aca4408c2fd47afad0ece8eee35f13e64eb99279bd86a1ffe8eb22", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0093_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0093_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0093_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0093_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0093_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0093_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0093_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 43.0572, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 1.808, + "max": 4.8305, + "mean": 3.9848, + "median": 4.147, + "p90": 4.5796 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 80015, + "min": 0.0, + "max": 34.4244, + "mean": 4.0497, + "median": 2.8906, + "p90": 8.3542 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 14, + "schools_waterpoints": 0, + "urban_landuse": 2101, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 11, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0094_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0094_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..33c00492b600cfeddb273047750e5b0f465fad05 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0094_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0094_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.202197776473156, + "lat": -0.41468809961185255 + }, + "bbox": [ + 34.1797141474376, + -0.4371711397598208, + 34.22468140550871, + -0.3922050594638843 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0094_label_positive_jitter_packet.png", + "sha256": "232ef1fdbf7b37277d92ce365900d27116be9884b9724c86d2446be90ddb6fc6", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0094_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0094_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0094_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0094_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0094_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0094_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0094_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 48.151, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 1.9976, + "max": 5.0399, + "mean": 4.2891, + "median": 4.5072, + "p90": 4.8906 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 136407, + "min": 0.0, + "max": 63.8452, + "mean": 11.4326, + "median": 5.2361, + "p90": 35.3768 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 112, + "schools_waterpoints": 8, + "urban_landuse": 6915, + "water_surface": 13, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0095_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0095_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..558ce75c779d33cf21fcaa82ebdfe45cf038c52f --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0095_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0095_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.20560346119953, + "lat": -0.4233415269501822 + }, + "bbox": [ + 34.18311980732997, + -0.44582456709815044, + 34.22808711506909, + -0.4008584868022139 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0095_label_positive_jitter_packet.png", + "sha256": "1f5ddd6565abe8723895ba18cc3532d492e77fb594741666baab76531b553ae2", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0095_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0095_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0095_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0095_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0095_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0095_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0095_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 45.753, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.9187, + "max": 5.1002, + "mean": 4.5816, + "median": 4.6937, + "p90": 4.9551 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 121374, + "min": 0.0, + "max": 63.8731, + "mean": 18.3676, + "median": 12.9231, + "p90": 41.2072 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 109, + "schools_waterpoints": 8, + "urban_landuse": 7734, + "water_surface": 11, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0096_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0096_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..934c0334ac4ae5286bcd58d75e9792db934a3b87 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0096_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0096_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.28193118518353, + "lat": -0.4772150936661089 + }, + "bbox": [ + 34.259447365168334, + -0.4996981338140772, + 34.30441500519873, + -0.45473205351814067 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0096_label_positive_jitter_packet.png", + "sha256": "c33a8f141fb9cbffa143ca4d9d169b190cae0825a00ff3d2828f137bd13a54e2", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0096_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0096_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0096_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0096_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0096_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0096_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0096_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 47.4633, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0015, + "max": 3.4215, + "mean": 1.2628, + "median": 1.187, + "p90": 2.3718 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 166117, + "min": 0.0, + "max": 21.6919, + "mean": 2.5356, + "median": 1.8791, + "p90": 6.3345 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 56, + "schools_waterpoints": 1, + "urban_landuse": 2615, + "water_surface": 0, + "waterways": 7 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 20, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0098_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0098_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..6d9ca7e9264675ac83ee4a546e016e5296fdfc59 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0098_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0098_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.26990065113566, + "lat": -0.469250167522606 + }, + "bbox": [ + 34.247416856936574, + -0.49173320767057427, + 34.29238444533474, + -0.44676712737463775 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0098_label_positive_jitter_packet.png", + "sha256": "c30b62c48cdb59fddc7715ac67dfb149384876c555a466e8b04c1c3272bc6072", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0098_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0098_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0098_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0098_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0098_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0098_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0098_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 46.6123, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0021, + "max": 3.6734, + "mean": 1.6193, + "median": 1.623, + "p90": 2.8028 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 185992, + "min": 0.0, + "max": 12.6294, + "mean": 2.1661, + "median": 1.7193, + "p90": 4.9211 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 50, + "schools_waterpoints": 0, + "urban_landuse": 2749, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 20, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0099_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0099_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..749039ef1d2e6e97e3697ee234001e6871aab99b --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0099_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0099_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.215412441549866, + "lat": -0.4163239469371707 + }, + "bbox": [ + 34.192928807859, + -0.43880698708513893, + 34.237896075240734, + -0.3938409067892024 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0099_label_positive_jitter_packet.png", + "sha256": "6cbd1ac6747640291992bc19aae3998c398ef43eb8a8ab8ebc35a45be82b932e", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0099_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0099_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0099_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0099_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0099_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0099_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0099_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 45.2114, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.9015, + "max": 4.9796, + "mean": 4.4946, + "median": 4.601, + "p90": 4.8337 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 89971, + "min": 0.0, + "max": 63.8768, + "mean": 16.5664, + "median": 9.3594, + "p90": 42.3696 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 74, + "schools_waterpoints": 7, + "urban_landuse": 5724, + "water_surface": 3, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0101_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0101_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..28633ecd413bc7ddcc4cd6315cd756bf145790d5 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0101_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0101_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.20853012703129, + "lat": -0.4218103224752656 + }, + "bbox": [ + 34.18604647759341, + -0.4442933626232339, + 34.23101377646917, + -0.39932728232729736 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0101_label_positive_jitter_packet.png", + "sha256": "60c9322fa3b57875900c182d1aedaf536d51cc1b8f422c461289b2a747a03cad", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0101_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0101_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0101_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0101_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0101_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0101_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0101_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 46.2022, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.9275, + "max": 5.0694, + "mean": 4.5613, + "median": 4.6693, + "p90": 4.9244 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 115778, + "min": 0.0, + "max": 63.8073, + "mean": 18.1668, + "median": 11.8871, + "p90": 41.6477 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 103, + "schools_waterpoints": 8, + "urban_landuse": 7362, + "water_surface": 3, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0102_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0102_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..c76268d47e7f48ff2516b88c6e57255e6b4317ac --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0102_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0102_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.28816297988613, + "lat": -0.4762453496314702 + }, + "bbox": [ + 34.265679163037326, + -0.49872838977943845, + 34.310646796734936, + -0.45376230948350194 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0102_label_positive_jitter_packet.png", + "sha256": "08ac1f92b8cd46c0fab50450d07fce4024aebbc919a2b0f7269f1db3c54659d6", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0102_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0102_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0102_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0102_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0102_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0102_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0102_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 48.1773, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0014, + "max": 3.8411, + "mean": 1.4864, + "median": 1.4201, + "p90": 2.8704 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 157084, + "min": 0.0, + "max": 33.036, + "mean": 3.0292, + "median": 1.9838, + "p90": 7.613 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 51, + "schools_waterpoints": 2, + "urban_landuse": 2748, + "water_surface": 0, + "waterways": 7 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 20, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0103_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0103_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..cf7ff151a8b591430ae1d4fbe4697e3ac82c3237 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0103_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0103_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.20781805462927, + "lat": -0.421203062081154 + }, + "bbox": [ + 34.1853344069445, + -0.44368610222912225, + 34.230301702314044, + -0.39872002193318573 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0103_label_positive_jitter_packet.png", + "sha256": "500f1559110cb38e35b134a7e37084a28545cde6c507a6cfd96f2ba7e1518e66", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0103_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0103_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0103_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0103_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0103_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0103_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0103_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 46.3266, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.8472, + "max": 5.0679, + "mean": 4.5437, + "median": 4.6679, + "p90": 4.9228 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 117171, + "min": 0.0, + "max": 63.8278, + "mean": 17.564, + "median": 10.4114, + "p90": 41.5248 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 100, + "schools_waterpoints": 8, + "urban_landuse": 7331, + "water_surface": 3, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0104_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0104_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..20ac6d89b4e7060cd75eed2996f489b1ca824c83 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0104_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0104_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.20669100507438, + "lat": -0.41837905104389156 + }, + "bbox": [ + 34.184207365509096, + -0.4408620911918598, + 34.22917464463967, + -0.3958960108959233 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0104_label_positive_jitter_packet.png", + "sha256": "ade8b6e2c41be6fe0bf3fbd81d7e1e70962bc290f2c16ba683a3ac363211996c", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0104_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0104_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0104_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0104_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0104_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0104_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0104_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 46.826, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.5667, + "max": 5.0483, + "mean": 4.4653, + "median": 4.6485, + "p90": 4.9033 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 119190, + "min": 0.0, + "max": 63.8076, + "mean": 15.275, + "median": 7.6523, + "p90": 41.1853 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 103, + "schools_waterpoints": 8, + "urban_landuse": 7056, + "water_surface": 7, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0105_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0105_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..8ca6fabc383867664b1ea3b357610e8e7d6f83e2 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0105_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0105_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.203745619623184, + "lat": -0.42209463140258174 + }, + "bbox": [ + 34.18126196936365, + -0.44457767155055, + 34.226229269882715, + -0.3996115912546135 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0105_label_positive_jitter_packet.png", + "sha256": "5cdf38a2783b8c2067f39a0c8da7465f7a9cc4b4746bd10eca50ae4a354ad54b", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0105_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0105_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0105_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0105_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0105_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0105_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0105_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 46.04, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.731, + "max": 5.0993, + "mean": 4.5373, + "median": 4.6843, + "p90": 4.9542 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 125453, + "min": 0.0, + "max": 63.895, + "mean": 17.1836, + "median": 9.7651, + "p90": 40.9398 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 111, + "schools_waterpoints": 9, + "urban_landuse": 7698, + "water_surface": 11, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0107_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0107_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..ad1d44322a2c526df8ea98395c9c83f02f100185 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0107_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0107_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.22458534383479, + "lat": -0.41016917528059044 + }, + "bbox": [ + 34.202101727563985, + -0.4326522154285587, + 34.247068960105594, + -0.3876861351326222 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0107_label_positive_jitter_packet.png", + "sha256": "61ce85772db5e6874c145f73c55f26a12d9491d1634176b51665f188a4aff64f", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0107_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0107_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0107_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0107_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0107_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0107_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0107_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 41.5008, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 3.1556, + "max": 4.8708, + "mean": 4.4762, + "median": 4.5411, + "p90": 4.7162 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 53430, + "min": 0.0, + "max": 58.7349, + "mean": 12.6567, + "median": 6.5073, + "p90": 38.2944 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 64, + "schools_waterpoints": 3, + "urban_landuse": 3074, + "water_surface": 2, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 24, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0108_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0108_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..6aa82456a1ad607aa73438f5877bd4eea64e9c43 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0108_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0108_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.20541633811252, + "lat": -0.4233913073114873 + }, + "bbox": [ + 34.182932684098624, + -0.44587434745945553, + 34.22789999212642, + -0.400908267163519 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0108_label_positive_jitter_packet.png", + "sha256": "944877f9e1f790ac044521e5fb2ebab103e7886ecc00977003f921aac8a8e657", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0108_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0108_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0108_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0108_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0108_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0108_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0108_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 45.728, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.9148, + "max": 5.1017, + "mean": 4.5818, + "median": 4.6953, + "p90": 4.9566 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 121634, + "min": 0.0, + "max": 63.8856, + "mean": 18.3538, + "median": 12.9029, + "p90": 41.1852 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 109, + "schools_waterpoints": 8, + "urban_landuse": 7741, + "water_surface": 11, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0109_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0109_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..17b32916a40350a9d5720ab7b774e71bcdfcbc8d --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0109_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0109_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.277823413123755, + "lat": -0.4691095584220736 + }, + "bbox": [ + 34.255339619376514, + -0.49159259857004184, + 34.300307206871, + -0.4466265182741053 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0109_label_positive_jitter_packet.png", + "sha256": "cd888b8f1cc0e68ec52affcfc31407fb372e83f57305dc8d66581dce922434f4", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0109_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0109_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0109_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0109_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0109_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0109_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0109_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 46.7612, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0023, + "max": 3.5217, + "mean": 1.562, + "median": 1.5562, + "p90": 2.6756 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 151493, + "min": 0.0, + "max": 12.6394, + "mean": 2.1215, + "median": 1.6066, + "p90": 5.0228 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 46, + "schools_waterpoints": 0, + "urban_landuse": 2244, + "water_surface": 0, + "waterways": 6 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 20, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0110_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0110_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..6a35bf43da6a0992061ce148c876c32bd7789c96 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0110_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0110_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.21089700726242, + "lat": -0.41113463206427653 + }, + "bbox": [ + 34.18841338827621, + -0.4336176722122448, + 34.233380626248625, + -0.38865159191630827 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0110_label_positive_jitter_packet.png", + "sha256": "d508c1b3697b520d57f3ecbaa8c9444957cf47e8b305afdd3fb922672624e5b8", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0110_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0110_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0110_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0110_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0110_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0110_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0110_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 46.2978, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.2698, + "max": 4.9576, + "mean": 4.3394, + "median": 4.5734, + "p90": 4.7923 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 101192, + "min": 0.0, + "max": 61.6372, + "mean": 12.0974, + "median": 6.6481, + "p90": 35.0942 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 86, + "schools_waterpoints": 7, + "urban_landuse": 5467, + "water_surface": 4, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0111_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0111_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..f0d6919710e37a71af82d816f904261cc6312e54 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0111_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0111_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.28797559975976, + "lat": -0.4724839880683827 + }, + "bbox": [ + 34.26549179513154, + -0.49496702821635097, + 34.310459404387984, + -0.45000094792041445 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0111_label_positive_jitter_packet.png", + "sha256": "7792cacfb2fd1ef30a587ebff019c238a9d5bbb26bb81e9a3ca09a6db6bd4c7e", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0111_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0111_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0111_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0111_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0111_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0111_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0111_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 48.0771, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.001, + "max": 3.944, + "mean": 1.64, + "median": 1.6205, + "p90": 3.0244 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 142218, + "min": 0.0, + "max": 25.8861, + "mean": 2.7131, + "median": 1.8545, + "p90": 6.9976 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 47, + "schools_waterpoints": 0, + "urban_landuse": 2524, + "water_surface": 0, + "waterways": 7 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 20, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0113_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0113_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..180261bc9934740b9a3978d2f91d67b008798219 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0113_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0113_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.191194208066015, + "lat": -0.4222284518835943 + }, + "bbox": [ + 34.16871055741956, + -0.44471149203156257, + 34.21367785871247, + -0.39974541173562606 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0113_label_positive_jitter_packet.png", + "sha256": "b26ff419e41dacdc95e657c85b662b999dac8cb8a634f557d36dce3c18846b93", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0113_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0113_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0113_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0113_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0113_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0113_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0113_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 47.482, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.4566, + "max": 5.1364, + "mean": 4.436, + "median": 4.6778, + "p90": 5.0217 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 150410, + "min": 0.0, + "max": 63.8918, + "mean": 12.9118, + "median": 5.5735, + "p90": 37.9873 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 122, + "schools_waterpoints": 9, + "urban_landuse": 7567, + "water_surface": 12, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0115_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0115_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..3dd1fa0728eb2130cbd43e5dfe500a886770da76 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0115_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0115_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.28914192761795, + "lat": -0.48180061747236 + }, + "bbox": [ + 34.266658092542926, + -0.5042836576203283, + 34.31162576269297, + -0.45931757732439177 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0115_label_positive_jitter_packet.png", + "sha256": "856aa13c580bf581a2b7bb24ab902a10823e107452f585b5493766d843d8caca", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0115_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0115_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0115_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0115_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0115_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0115_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0115_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 47.9376, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0016, + "max": 3.7409, + "mean": 1.3049, + "median": 1.1726, + "p90": 2.6821 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 171260, + "min": 0.0, + "max": 33.0225, + "mean": 3.5943, + "median": 2.2279, + "p90": 8.7921 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 58, + "schools_waterpoints": 3, + "urban_landuse": 3125, + "water_surface": 0, + "waterways": 7 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 20, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0116_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0116_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..9b56f1bf97aa8e899de31b87b7acadd9f13c3dcb --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0116_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0116_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.204493481292936, + "lat": -0.41422886157338457 + }, + "bbox": [ + 34.18200985356099, + -0.4367119017213528, + 34.22697710902488, + -0.3917458214254163 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0116_label_positive_jitter_packet.png", + "sha256": "6e2e04b330666e156dbd3c45bafc58d8a249ae03b2174125a7cac67d2c30dddf", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0116_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0116_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0116_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0116_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0116_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0116_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0116_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 47.7185, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.0979, + "max": 5.0225, + "mean": 4.3156, + "median": 4.5404, + "p90": 4.872 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 126419, + "min": 0.0, + "max": 63.8159, + "mean": 11.8318, + "median": 5.6406, + "p90": 35.7171 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 104, + "schools_waterpoints": 8, + "urban_landuse": 6613, + "water_surface": 12, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0117_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0117_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..2e075ad6fb81d55959a1b2de37609798463affa9 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0117_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0117_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.207763217714245, + "lat": -0.4187024958704485 + }, + "bbox": [ + 34.18527957722177, + -0.44118553601841676, + 34.23024685820672, + -0.39621945572248024 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0117_label_positive_jitter_packet.png", + "sha256": "10972ac689e78efb54eca4fcfc85ceef2b11c458e8465ee4ef276f4530ecacd6", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0117_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0117_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0117_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0117_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0117_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0117_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0117_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 46.6806, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.649, + "max": 5.0451, + "mean": 4.4839, + "median": 4.6486, + "p90": 4.9002 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 116627, + "min": 0.0, + "max": 63.8528, + "mean": 15.7603, + "median": 8.1836, + "p90": 41.5573 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 99, + "schools_waterpoints": 8, + "urban_landuse": 7049, + "water_surface": 3, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0118_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0118_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..62ec43ea5e1a29339b9087663426b359eeb6b6ae --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0118_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0118_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.224914189139774, + "lat": -0.4416712043561703 + }, + "bbox": [ + 34.202430480972986, + -0.46415424450413856, + 34.24739789730656, + -0.41918816420820204 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0118_label_positive_jitter_packet.png", + "sha256": "3ae47f37d69f5050e5fd438378e02402db152154cf51ed2dfecfab0f29cdb999", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0118_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0118_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0118_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0118_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0118_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0118_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0118_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 45.5376, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 3.1619, + "max": 5.1584, + "mean": 4.6052, + "median": 4.6986, + "p90": 5.0123 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 164325, + "min": 0.0, + "max": 63.8883, + "mean": 12.0238, + "median": 4.5144, + "p90": 37.8742 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 90, + "schools_waterpoints": 4, + "urban_landuse": 6458, + "water_surface": 0, + "waterways": 1 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 29, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0120_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0120_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..5d4975d54bb7a8d9c2cf25876657fe8d4fe9c276 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0120_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0120_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.203991833704485, + "lat": -0.42096227798916025 + }, + "bbox": [ + 34.18150818671413, + -0.4434453181371285, + 34.22647548069484, + -0.398479237841192 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0120_label_positive_jitter_packet.png", + "sha256": "e4fd304fd03c2ff01dab51b846c6bc49db393a94cac68529c67e9275909c5615", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0120_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0120_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0120_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0120_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0120_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0120_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0120_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 46.4198, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.645, + "max": 5.0875, + "mean": 4.5084, + "median": 4.6746, + "p90": 4.9424 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 126174, + "min": 0.0, + "max": 63.8636, + "mean": 16.3798, + "median": 8.5594, + "p90": 40.894 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 103, + "schools_waterpoints": 9, + "urban_landuse": 7563, + "water_surface": 11, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0121_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0121_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..df0c762d87fa71efe891bcf517452e2a24fb7d04 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0121_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0121_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.209025758012196, + "lat": -0.4175877060852357 + }, + "bbox": [ + 34.18654212071236, + -0.44007074623320397, + 34.23150939531203, + -0.39510466593726745 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0121_label_positive_jitter_packet.png", + "sha256": "e1cec9d899e3a7b31838aff40e9bb4d497c5659ebcf8e69f51f5744e7f9f56f7", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0121_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0121_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0121_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0121_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0121_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0121_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0121_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 46.5854, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.631, + "max": 5.0277, + "mean": 4.469, + "median": 4.6352, + "p90": 4.8826 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 111843, + "min": 0.0, + "max": 63.8856, + "mean": 15.4494, + "median": 7.923, + "p90": 41.1223 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 97, + "schools_waterpoints": 8, + "urban_landuse": 6769, + "water_surface": 3, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0123_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0123_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..cd2cdc9473c6999b8c04f373a02a68cc9ab6410e --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0123_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0123_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.287168238049, + "lat": -0.4763466843173783 + }, + "bbox": [ + 34.264684420869614, + -0.49882972446534657, + 34.30965205522838, + -0.45386364416941005 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0123_label_positive_jitter_packet.png", + "sha256": "6a4e8ae4254da04247b7b707bce787eb4e07ad3a34924cee86275b25ab6c771d", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0123_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0123_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0123_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0123_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0123_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0123_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0123_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 48.0644, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 3.7769, + "mean": 1.4439, + "median": 1.3736, + "p90": 2.7895 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 158662, + "min": 0.0, + "max": 32.796, + "mean": 2.9932, + "median": 1.9858, + "p90": 7.4885 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 52, + "schools_waterpoints": 2, + "urban_landuse": 2768, + "water_surface": 0, + "waterways": 7 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 20, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0126_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0126_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..7d96d4ccab511fd240753b2074bd6ee3ec7467c1 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0126_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0126_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.28887750773257, + "lat": -0.4754567795668602 + }, + "bbox": [ + 34.26639369345384, + -0.4979398197148285, + 34.3113613220113, + -0.45297373941889196 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0126_label_positive_jitter_packet.png", + "sha256": "ec46fb8962152647399efb117004899c5cbc5c705362b348794b2dcb71ff6815", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0126_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0126_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0126_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0126_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0126_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0126_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0126_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 48.2243, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.002, + "max": 3.9079, + "mean": 1.5491, + "median": 1.4946, + "p90": 2.9607 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 153147, + "min": 0.0, + "max": 32.8936, + "mean": 2.9968, + "median": 1.9637, + "p90": 7.6419 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 52, + "schools_waterpoints": 1, + "urban_landuse": 2715, + "water_surface": 0, + "waterways": 7 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 20, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0127_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0127_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..faefea4ee4fdb13de4d413315d6ad8895c8b1025 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0127_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0127_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.288099360444136, + "lat": -0.4791442327028205 + }, + "bbox": [ + 34.26561553411079, + -0.5016272728507888, + 34.31058318677748, + -0.45666119255485227 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0127_label_positive_jitter_packet.png", + "sha256": "a642ea2031ace8a7884ba320d0fa6a15b79b0c81ab94fe989cab2efd678474b8", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0127_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0127_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0127_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0127_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0127_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0127_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0127_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 48.1425, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0016, + "max": 3.7495, + "mean": 1.3661, + "median": 1.2639, + "p90": 2.7289 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 164440, + "min": 0.0, + "max": 32.9406, + "mean": 3.2607, + "median": 2.0877, + "p90": 8.0091 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 53, + "schools_waterpoints": 2, + "urban_landuse": 2929, + "water_surface": 0, + "waterways": 7 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 20, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0128_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0128_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..e6acd6e2a4e22098e8481a1eb75f54036ecf3806 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0128_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0128_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.20836705117867, + "lat": -0.4223804204735996 + }, + "bbox": [ + 34.18588340009266, + -0.44486346062156784, + 34.230850702264675, + -0.3998973803256313 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0128_label_positive_jitter_packet.png", + "sha256": "278ff5fb8386c3bb044d036a0087f5c9760da1b3bb51b575043cd9a4fca3f9e1", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0128_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0128_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0128_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0128_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0128_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0128_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0128_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 46.1089, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.9639, + "max": 5.0756, + "mean": 4.573, + "median": 4.6741, + "p90": 4.9305 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 116478, + "min": 0.0, + "max": 63.8172, + "mean": 18.463, + "median": 12.8104, + "p90": 41.59 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 106, + "schools_waterpoints": 8, + "urban_landuse": 7473, + "water_surface": 3, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0131_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0131_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..8881eb9273aadf0ab6f769d00e2aee88457abe27 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0131_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0131_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.21548226420271, + "lat": -0.420057899911424 + }, + "bbox": [ + 34.19299861981705, + -0.44254094005939226, + 34.23796590858838, + -0.39757485976345575 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0131_label_positive_jitter_packet.png", + "sha256": "4cbb3ec26c8b3802eb8deca697aa68be0e88b05c2bc7182e9f99dc8abdba06b6", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0131_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0131_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0131_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0131_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0131_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0131_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0131_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 45.6627, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 3.1392, + "max": 5.0136, + "mean": 4.5534, + "median": 4.6234, + "p90": 4.8687 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 99306, + "min": 0.0, + "max": 63.8147, + "mean": 18.7372, + "median": 13.3483, + "p90": 43.0865 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 80, + "schools_waterpoints": 7, + "urban_landuse": 6583, + "water_surface": 3, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 32, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0132_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0132_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..fbd3dc3e60338afb26a589f9499abbf9b6fbd3ce --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0132_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0132_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.21380693196651, + "lat": -0.4186769137163254 + }, + "bbox": [ + 34.1913232915474, + -0.4411599538642937, + 34.23629057238562, + -0.39619387356835717 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0132_label_positive_jitter_packet.png", + "sha256": "faa809efbd2334a790919f68bbcf97a0fb46691336aeb663f298b3cb3a859453", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0132_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0132_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0132_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0132_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0132_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0132_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0132_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 45.9018, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.9647, + "max": 5.0104, + "mean": 4.5254, + "median": 4.6225, + "p90": 4.8655 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 100011, + "min": 0.0, + "max": 63.8004, + "mean": 17.6059, + "median": 10.7204, + "p90": 43.0092 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 82, + "schools_waterpoints": 8, + "urban_landuse": 6482, + "water_surface": 3, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 32, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0133_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0133_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..40d7e640b99f2da41aedb9deee88c240196f4fa2 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0133_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0133_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.21262314546934, + "lat": -0.422233501347407 + }, + "bbox": [ + 34.19013949480828, + -0.44471654149537526, + 34.235106796130395, + -0.39975046119943874 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0133_label_positive_jitter_packet.png", + "sha256": "ff3bd1d4be47d9b25bc31c9eb0c9d9490a8ce8d251cfe7903178e2cb4f9fcc85", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0133_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0133_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0133_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0133_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0133_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0133_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0133_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 46.0126, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 3.1456, + "max": 5.0499, + "mean": 4.5832, + "median": 4.6529, + "p90": 4.9049 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 108578, + "min": 0.0, + "max": 63.8947, + "mean": 19.5697, + "median": 15.6947, + "p90": 42.2335 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 93, + "schools_waterpoints": 8, + "urban_landuse": 7245, + "water_surface": 3, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 32, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0134_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0134_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..7840333d22eef51a83451ac2294ee0170de372b4 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0134_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0134_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.284882907965475, + "lat": -0.47917664507693875 + }, + "bbox": [ + 34.26239908152576, + -0.501659685224907, + 34.30736673440519, + -0.4566936049289705 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0134_label_positive_jitter_packet.png", + "sha256": "84d066a1d9ff080305ba80533e0a1746c1f9ce8c85b10b0da9f72a690450864b", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0134_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0134_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0134_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0134_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0134_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0134_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0134_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 47.8091, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 3.5385, + "mean": 1.2558, + "median": 1.1498, + "p90": 2.4746 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 166978, + "min": 0.0, + "max": 27.2802, + "mean": 2.9155, + "median": 2.0553, + "p90": 7.2282 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 53, + "schools_waterpoints": 1, + "urban_landuse": 2852, + "water_surface": 0, + "waterways": 7 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 20, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0135_label_positive_jitter_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0135_label_positive_jitter_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..817355079d524f9a5df67707b70cca04ad454461 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0135_label_positive_jitter_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0135_label_positive_jitter", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.19997735924699, + "lat": -0.41889089376806626 + }, + "bbox": [ + 34.17749371821412, + -0.4413739339160345, + 34.22246100027985, + -0.396407853620098 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0135_label_positive_jitter_packet.png", + "sha256": "a1bab21402fa321eca3f79394b5467471f56f9b5056c5cb6597d24010e9c001f", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0135_label_positive_jitter", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0135_label_positive_jitter/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0135_label_positive_jitter/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0135_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0135_label_positive_jitter/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0135_label_positive_jitter/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0135_label_positive_jitter/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "label_positive_jitter", + "packet_std": 47.4868, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.2579, + "max": 5.0913, + "mean": 4.3994, + "median": 4.5895, + "p90": 4.9462 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 141447, + "min": 0.0, + "max": 63.8908, + "mean": 13.5214, + "median": 5.8245, + "p90": 39.826 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 116, + "schools_waterpoints": 9, + "urban_landuse": 7615, + "water_surface": 12, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "label_positive_jitter", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0139_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0139_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..fef46232512ea43f2b24585f98a743e6c88cf053 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0139_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0139_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.1406085713663, + "lat": -0.5616775205566135 + }, + "bbox": [ + 34.118124450851475, + -0.5841605607045818, + 34.163092691881126, + -0.5391944804086451 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0139_hard_negative_water_urban_packet.png", + "sha256": "77f2cae612b1d2b622ea2c2438f0a160bf5d53815fbd0c941946413f791b6178", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0139_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0139_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0139_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0139_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0139_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0139_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0139_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 57.1674, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 5.2921, + "max": 5.7983, + "mean": 5.4873, + "median": 5.4735, + "p90": 5.6352 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 168110, + "min": 0.0, + "max": 34.6048, + "mean": 3.4384, + "median": 2.4911, + "p90": 7.1589 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 82, + "schools_waterpoints": 0, + "urban_landuse": 2594, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0140_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0140_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..48e6ca21d1b56fcd27330fd2250486286f9de94f --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0140_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0140_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.2304612684528, + "lat": -0.4874313235900472 + }, + "bbox": [ + 34.207977414688344, + -0.5099143637380155, + 34.252945122217255, + -0.46494828344207895 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0140_hard_negative_water_urban_packet.png", + "sha256": "151b205f24e4deccda6cdbe3eb0e082a0808ec4fb541c544690befb26cb31047", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0140_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0140_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0140_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0140_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0140_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0140_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0140_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 57.7786, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.6861, + "max": 5.2264, + "mean": 3.2154, + "median": 3.166, + "p90": 5.0476 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 154546, + "min": 0.0002, + "max": 9.42, + "mean": 1.2481, + "median": 1.0734, + "p90": 2.5901 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 13, + "schools_waterpoints": 1, + "urban_landuse": 1080, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0143_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0143_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..f5f4fc0582268ffc81fcff48bf9719b387c33503 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0143_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0143_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.20788938851799, + "lat": -0.3969027661021167 + }, + "bbox": [ + 34.185405808913174, + -0.419385806250085, + 34.23037296812281, + -0.37441972595414846 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0143_hard_negative_water_urban_packet.png", + "sha256": "994598990855cbdf1ec1231727d55df27e360265ae72acd6208f592ece2adc3b", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0143_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0143_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0143_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0143_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0143_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0143_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0143_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 47.8605, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.9875, + "max": 4.777, + "mean": 3.8337, + "median": 4.085, + "p90": 4.6792 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 119694, + "min": 0.0, + "max": 43.4504, + "mean": 8.3021, + "median": 4.845, + "p90": 24.8971 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 79, + "schools_waterpoints": 6, + "urban_landuse": 5325, + "water_surface": 4, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 2, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0145_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0145_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..99a05fc57582ecac506c6c47c8e7e246bc9738d9 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0145_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0145_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.40451445180404, + "lat": -0.5940248663083151 + }, + "bbox": [ + 34.3820302032623, + -0.6165079064562834, + 34.42699870034578, + -0.5715418261603468 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0145_hard_negative_water_urban_packet.png", + "sha256": "065070d9f30d9f4814252e67cab53781eadf76a4bba78635c68363860d94ac96", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0145_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0145_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0145_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0145_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0145_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0145_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0145_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 46.6635, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 8.342, + "max": 9.7316, + "mean": 9.2632, + "median": 9.2838, + "p90": 9.4739 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 257360, + "min": 0.0002, + "max": 28.2773, + "mean": 3.5141, + "median": 2.7288, + "p90": 7.146 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 46, + "schools_waterpoints": 2, + "urban_landuse": 3558, + "water_surface": 0, + "waterways": 4 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0146_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0146_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..1eefee870b6d5223795b01d0510a7afb4e7835cc --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0146_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0146_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.22918101081958, + "lat": -0.6067025156417375 + }, + "bbox": [ + 34.20669671014605, + -0.6291855557897058, + 34.25166531149311, + -0.5842194754937692 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0146_hard_negative_water_urban_packet.png", + "sha256": "5d084d487ef24ddedf58eaa761f7bbda9d4df733954cfd8dea6657689f311ec2", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0146_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0146_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0146_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0146_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0146_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0146_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0146_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 53.1066, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 5.9932, + "max": 7.0516, + "mean": 6.643, + "median": 6.6504, + "p90": 6.9478 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 187787, + "min": 0.0002, + "max": 9.8954, + "mean": 1.3788, + "median": 1.181, + "p90": 2.9605 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 9, + "schools_waterpoints": 0, + "urban_landuse": 1690, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0148_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0148_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..2ce2f5c511309757ab5956b09a7980983b787ef7 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0148_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0148_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.19753190253338, + "lat": -0.49177003850489076 + }, + "bbox": [ + 34.175048034219714, + -0.5142530786528591, + 34.22001577084704, + -0.4692869983569225 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0148_hard_negative_water_urban_packet.png", + "sha256": "34376649c06d2a8814d8a05cfd371e0dd18e438e2bd8fe177bff006bebfa7a4d", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0148_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0148_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0148_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0148_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0148_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0148_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0148_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 63.3888, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 1.5903, + "max": 5.901, + "mean": 4.6101, + "median": 4.9045, + "p90": 5.3964 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 168408, + "min": 0.0002, + "max": 28.2473, + "mean": 2.1748, + "median": 1.4379, + "p90": 5.0536 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 5, + "schools_waterpoints": 0, + "urban_landuse": 1608, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0149_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0149_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..0da6fba6bf2af8584f7cfd882c46641f1f1e9306 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0149_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0149_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.14735332731607, + "lat": -0.6222646087469101 + }, + "bbox": [ + 34.12486896114429, + -0.6447476488948785, + 34.16983769348785, + -0.5997815685989418 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0149_hard_negative_water_urban_packet.png", + "sha256": "cec0f18e4fc32eef1ad7ab04904344cb6905799a94053f589b7cc6f5e3c2b6ef", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0149_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0149_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0149_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0149_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0149_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0149_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0149_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 85.7118, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 5.74, + "max": 6.7141, + "mean": 6.2805, + "median": 6.2811, + "p90": 6.5703 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 121178, + "min": 0.0003, + "max": 9.9996, + "mean": 1.4555, + "median": 1.3502, + "p90": 3.0066 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 0, + "schools_waterpoints": 0, + "urban_landuse": 1338, + "water_surface": 0, + "waterways": 2 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0150_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0150_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..79a0e669bbe5cf45553263476fcd7b1ecf731f96 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0150_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0150_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.19586684785643, + "lat": -0.577466437391975 + }, + "bbox": [ + 34.17338266574646, + -0.5999494775399433, + 34.2183510299664, + -0.5549833972440067 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0150_hard_negative_water_urban_packet.png", + "sha256": "863b7ee5e64100b6141e759848c8b91d3694cfadbe27f2384e56594a8c0b6d61", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0150_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0150_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0150_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0150_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0150_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0150_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0150_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 56.9988, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 4.1355, + "max": 6.68, + "mean": 5.8185, + "median": 5.8585, + "p90": 6.3976 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 235664, + "min": 0.0003, + "max": 13.7854, + "mean": 2.2973, + "median": 2.1695, + "p90": 4.2046 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 58, + "schools_waterpoints": 0, + "urban_landuse": 3027, + "water_surface": 1, + "waterways": 3 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0153_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0153_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..a1b7317c29aa0f5bc687f6b93e662487bd901cf6 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0153_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0153_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.27704360105273, + "lat": -0.48411977883086976 + }, + "bbox": [ + 34.25455975830626, + -0.5066028189788381, + 34.29952744379921, + -0.4616367386829015 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0153_hard_negative_water_urban_packet.png", + "sha256": "acea154c8152307300c8a5ce710644cec68ea8e24d73bce9fb2360b4c874ac05", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0153_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0153_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0153_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0153_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0153_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0153_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0153_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 47.2907, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0009, + "max": 2.8034, + "mean": 0.96, + "median": 0.87, + "p90": 1.8784 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 184109, + "min": 0.0001, + "max": 12.6949, + "mean": 2.5772, + "median": 1.9954, + "p90": 6.3645 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 55, + "schools_waterpoints": 0, + "urban_landuse": 2759, + "water_surface": 1, + "waterways": 7 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 20, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0155_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0155_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..fda92271e7b9490888bc54018f6ac45b5378911b --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0155_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0155_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.125817897142205, + "lat": -0.4349060708021653 + }, + "bbox": [ + 34.10333420928343, + -0.45738911095013357, + 34.14830158500098, + -0.41242303065419705 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0155_hard_negative_water_urban_packet.png", + "sha256": "ab412015d6f0abb122e4d1f808cf4837828cc72e2ab022f7f784c1f2312e9cda", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0155_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0155_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0155_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0155_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0155_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0155_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0155_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 41.4278, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 3.6774, + "max": 5.1317, + "mean": 4.8113, + "median": 4.9768, + "p90": 5.0471 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 68100, + "min": 0.0, + "max": 11.9477, + "mean": 3.8865, + "median": 3.4853, + "p90": 7.9533 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 30, + "schools_waterpoints": 2, + "urban_landuse": 2792, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0156_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0156_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..604fbc0d4bf2098a22c03b775065fc1f1545bdab --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0156_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0156_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.32127582035375, + "lat": -0.5596431359452102 + }, + "bbox": [ + 34.2987917076512, + -0.5821261760931785, + 34.3437599330563, + -0.5371600957972419 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0156_hard_negative_water_urban_packet.png", + "sha256": "15dfa8d5a3e3ccc6da6cefcc124c5610416297a0e06a1bf119e09a100f9e20af", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0156_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0156_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0156_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0156_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0156_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0156_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0156_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 45.4235, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 1.1013, + "max": 6.6935, + "mean": 3.4682, + "median": 3.4619, + "p90": 5.0947 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 247974, + "min": 0.0001, + "max": 34.5889, + "mean": 2.7565, + "median": 2.1844, + "p90": 5.04 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 58, + "schools_waterpoints": 0, + "urban_landuse": 3533, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0158_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0158_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..84f22015118aa961d5c7cb7415ed0c08309306fb --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0158_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0158_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.12391365354748, + "lat": -0.565155816955234 + }, + "bbox": [ + 34.10142951960992, + -0.5876388571032023, + 34.14639778748504, + -0.5426727768072657 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0158_hard_negative_water_urban_packet.png", + "sha256": "bb6891f31de864ccd324e14466b929cc83a6f505444b267819115bddc063333f", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0158_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0158_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0158_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0158_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0158_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0158_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0158_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 55.4334, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 5.2923, + "max": 5.6526, + "mean": 5.4386, + "median": 5.4232, + "p90": 5.5376 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 197064, + "min": 0.0, + "max": 34.921, + "mean": 3.0385, + "median": 2.2494, + "p90": 6.2788 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 77, + "schools_waterpoints": 0, + "urban_landuse": 2461, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0159_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0159_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..a15051371989c050ef257a2d9912054c819e8574 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0159_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0159_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.41235259006067, + "lat": -0.5265315684430073 + }, + "bbox": [ + 34.38986860052438, + -0.5490146085909756, + 34.43483657959696, + -0.504048528295039 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0159_hard_negative_water_urban_packet.png", + "sha256": "0dfe72e3d9f27d7ef465f82159ca0760347da2de16ccab429c14722bc852f23e", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0159_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0159_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0159_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0159_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0159_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0159_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0159_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 47.0288, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 4.7562, + "mean": 1.3888, + "median": 0.7888, + "p90": 3.647 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 187051, + "min": 0.0, + "max": 10.373, + "mean": 2.1304, + "median": 1.9636, + "p90": 4.0207 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 3, + "schools_waterpoints": 0, + "urban_landuse": 2795, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0160_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0160_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..8f6dc93b7ec0b5d76a84b87eac5fe8a913aa6bdb --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0160_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0160_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.17731545770769, + "lat": -0.4824210123188898 + }, + "bbox": [ + 34.154831620584105, + -0.5049040524668581, + 34.19979929483128, + -0.4599379721709215 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0160_hard_negative_water_urban_packet.png", + "sha256": "dc12d4bab9bcdff47b842eaa359e9bf9daf7d3abea33da711701b1c86e5b6c8d", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0160_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0160_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0160_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0160_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0160_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0160_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0160_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 50.3712, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 3.9475, + "max": 5.7918, + "mean": 5.2873, + "median": 5.3122, + "p90": 5.599 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 162427, + "min": 0.0, + "max": 32.8786, + "mean": 3.4322, + "median": 2.1344, + "p90": 8.1886 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 12, + "schools_waterpoints": 0, + "urban_landuse": 2483, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0163_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0163_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..82ca0290586be2bc424804b42836ca9021f32db3 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0163_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0163_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.17349451239672, + "lat": -0.39913951832636807 + }, + "bbox": [ + 34.15101092669441, + -0.42162255847433633, + 34.19597809809903, + -0.3766564781783998 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0163_hard_negative_water_urban_packet.png", + "sha256": "0e33092a92e1de2fa7397761d139df88cfe53d5b193d7fb316f709caf18093e4", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0163_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0163_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0163_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0163_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0163_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0163_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0163_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 54.9846, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.1684, + "max": 4.6421, + "mean": 2.6207, + "median": 2.6756, + "p90": 4.2374 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 194789, + "min": 0.0, + "max": 36.9358, + "mean": 6.246, + "median": 3.8846, + "p90": 16.3048 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 106, + "schools_waterpoints": 3, + "urban_landuse": 5778, + "water_surface": 4, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 2, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0165_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0165_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..8b6765ed4ec07450dff691b1b6a62e99900b25ba --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0165_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0165_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.0590248075306, + "lat": -0.6429980894594598 + }, + "bbox": [ + 34.03654035151735, + -0.6654811296074281, + 34.08150926354384, + -0.6205150493114915 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0165_hard_negative_water_urban_packet.png", + "sha256": "c04346a875b3ff52179f1597074112b014abdf2d65b8348ada41ca10403168cc", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0165_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0165_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0165_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0165_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0165_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0165_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0165_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 41.3492, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 5.1946, + "max": 5.7882, + "mean": 5.4572, + "median": 5.4344, + "p90": 5.6127 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 70674, + "min": 0.0, + "max": 6.4369, + "mean": 1.4069, + "median": 1.3001, + "p90": 2.8862 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 8, + "schools_waterpoints": 0, + "urban_landuse": 1208, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0166_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0166_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..a5d26b2fb1bd25cfa6c888033ad843eadaff3ace --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0166_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0166_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.18888208954431, + "lat": -0.4867490933256311 + }, + "bbox": [ + 34.16639823805587, + -0.5092321334735994, + 34.211365941032746, + -0.46426605317766284 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0166_hard_negative_water_urban_packet.png", + "sha256": "c76f4e3d6fb288c7c0bd487fa9ebdbaf907e183c204b2343e59bd91eb101c192", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0166_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0166_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0166_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0166_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0166_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0166_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0166_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 58.6805, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.7779, + "max": 5.8461, + "mean": 5.0362, + "median": 5.2299, + "p90": 5.5793 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 197075, + "min": 0.0, + "max": 32.887, + "mean": 2.7548, + "median": 1.8017, + "p90": 6.6986 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 12, + "schools_waterpoints": 0, + "urban_landuse": 2417, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0168_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0168_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..ebb88365bf5eca35f7191101a0c69431d6a2f29f --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0168_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0168_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.37090381478574, + "lat": -0.5406557192397097 + }, + "bbox": [ + 34.34841977362991, + -0.563138759387678, + 34.393387855941576, + -0.5181726790917414 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0168_hard_negative_water_urban_packet.png", + "sha256": "5e1476fadce72aaf980065217ac6d4428dddf1ff2c4fe923dc8cac63a9c006d9", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0168_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0168_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0168_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0168_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0168_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0168_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0168_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 51.0733, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0014, + "max": 7.4532, + "mean": 2.9235, + "median": 2.7552, + "p90": 5.9956 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 229614, + "min": 0.0003, + "max": 32.0556, + "mean": 2.8268, + "median": 2.2167, + "p90": 5.167 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 22, + "schools_waterpoints": 0, + "urban_landuse": 2904, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0169_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0169_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..8712b336a675f566686a091c2a6d86f5e9361da9 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0169_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0169_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.33799995728632, + "lat": -0.508092854749116 + }, + "bbox": [ + 34.31551603308153, + -0.5305758948970843, + 34.36048388149111, + -0.48560981460114777 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0169_hard_negative_water_urban_packet.png", + "sha256": "49405b892034f555de018b7c51bf3845ec8839333a193f566167545220f0b14b", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0169_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0169_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0169_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0169_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0169_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0169_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0169_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 49.6396, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0001, + "max": 3.8046, + "mean": 1.6083, + "median": 1.5287, + "p90": 3.1722 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 238973, + "min": 0.0, + "max": 30.0583, + "mean": 3.2079, + "median": 2.4474, + "p90": 6.0444 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 56, + "schools_waterpoints": 2, + "urban_landuse": 3816, + "water_surface": 1, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0170_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0170_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..80184f950b844dc5d77c3cbc75d0257091bb8232 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0170_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0170_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.21191598965806, + "lat": -0.45160763602099324 + }, + "bbox": [ + 34.18943225109507, + -0.4740906761689615, + 34.23439972822105, + -0.429124595873025 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0170_hard_negative_water_urban_packet.png", + "sha256": "1323fe88cff8981768b2ddb2e040e43bbd8e60c43332ec2ea1218362977aaad5", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0170_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0170_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0170_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0170_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0170_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0170_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0170_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 47.3731, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 4.1765, + "max": 5.3244, + "mean": 4.9346, + "median": 4.9655, + "p90": 5.1789 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 187681, + "min": 0.0, + "max": 63.8912, + "mean": 10.6747, + "median": 4.4871, + "p90": 34.034 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 63, + "schools_waterpoints": 4, + "urban_landuse": 5923, + "water_surface": 0, + "waterways": 1 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 5, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0173_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0173_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..bc5f811dc80aac9136337b6bc168fb7a6b9e7c3a --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0173_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0173_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.24933658385421, + "lat": -0.6013860953416654 + }, + "bbox": [ + 34.22685230517639, + -0.6238691354896337, + 34.271820862532024, + -0.5789030551936971 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0173_hard_negative_water_urban_packet.png", + "sha256": "235559f77c366486f95008911e07d52c46ac286c052ba6d706011cd5a5e19c36", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0173_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0173_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0173_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0173_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0173_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0173_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0173_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 51.5178, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 5.4582, + "max": 7.003, + "mean": 6.2776, + "median": 6.288, + "p90": 6.7029 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 164355, + "min": 0.0002, + "max": 10.5011, + "mean": 1.4624, + "median": 1.2244, + "p90": 3.0695 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 7, + "schools_waterpoints": 0, + "urban_landuse": 1676, + "water_surface": 1, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0175_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0175_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..09fa8b35f65a5abe454d59e6c2c8c5ddbfecf460 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0175_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0175_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.31573185874876, + "lat": -0.5127350504836491 + }, + "bbox": [ + 34.29324791831524, + -0.5352180906316174, + 34.33821579918229, + -0.49025201033568083 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0175_hard_negative_water_urban_packet.png", + "sha256": "b1af7a715348c8861eab418a6b9c067ab48c8572d1542f4d1b735b967898ba3d", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0175_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0175_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0175_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0175_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0175_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0175_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0175_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 48.4102, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0005, + "max": 3.2085, + "mean": 1.0555, + "median": 0.8669, + "p90": 2.27 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 250487, + "min": 0.0003, + "max": 33.0964, + "mean": 4.4508, + "median": 2.8505, + "p90": 9.6947 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 68, + "schools_waterpoints": 6, + "urban_landuse": 4709, + "water_surface": 1, + "waterways": 2 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0176_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0176_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..beb327218a6d1bc06707255497aad1e820282c7e --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0176_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0176_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.20386242248804, + "lat": -0.45060815362475615 + }, + "bbox": [ + 34.18137868701312, + -0.4730911937727244, + 34.22634615796295, + -0.4281251134767879 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0176_hard_negative_water_urban_packet.png", + "sha256": "222c4b9d6b394b5a11ae0eaebcb2ffc44bde6235269c2d7a18086f203827961b", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0176_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0176_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0176_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0176_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0176_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0176_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0176_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 45.7376, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 4.6732, + "max": 5.3614, + "mean": 5.0253, + "median": 5.0247, + "p90": 5.2159 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 161273, + "min": 0.0, + "max": 63.8532, + "mean": 11.9393, + "median": 5.7021, + "p90": 36.3459 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 59, + "schools_waterpoints": 4, + "urban_landuse": 5472, + "water_surface": 0, + "waterways": 1 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0179_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0179_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..7ac8348663a5ed5c4a5ead441555bce297d90c72 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0179_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0179_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.31250911811747, + "lat": -0.5157017003715567 + }, + "bbox": [ + 34.29002516723548, + -0.538184740519525, + 34.33499306899946, + -0.49321866022358846 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0179_hard_negative_water_urban_packet.png", + "sha256": "876bf57d184213dab74295380af3e09f7b71ec945ab019a7b9edbdf8a0b2bfdb", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0179_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0179_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0179_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0179_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0179_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0179_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0179_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 48.0235, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0009, + "max": 2.9147, + "mean": 0.9252, + "median": 0.8133, + "p90": 1.9237 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 245365, + "min": 0.0003, + "max": 33.1442, + "mean": 4.2961, + "median": 2.7199, + "p90": 9.5752 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 69, + "schools_waterpoints": 6, + "urban_landuse": 4430, + "water_surface": 1, + "waterways": 3 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0180_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0180_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..50031e1ced6b455bc38cef8b34c0ff7ef1344342 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0180_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0180_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.18160242870698, + "lat": -0.5266214194117864 + }, + "bbox": [ + 34.159118438846626, + -0.5491044595597547, + 34.204086418567336, + -0.5041383792638181 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0180_hard_negative_water_urban_packet.png", + "sha256": "ad85cfb59a635efc4151fd8a37bf6705d978454feb1ce75ad694f7a152b9bdd9", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0180_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0180_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0180_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0180_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0180_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0180_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0180_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 57.233, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.5345, + "max": 6.045, + "mean": 5.0277, + "median": 5.3156, + "p90": 5.9102 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 222369, + "min": 0.0003, + "max": 56.006, + "mean": 6.656, + "median": 2.8544, + "p90": 17.079 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 65, + "schools_waterpoints": 1, + "urban_landuse": 6013, + "water_surface": 0, + "waterways": 1 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0183_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0183_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..caf97356154f15ac743b0cd0433ce919c1caa4ae --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0183_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0183_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.16835177251938, + "lat": -0.5605360891305773 + }, + "bbox": [ + 34.145867656391275, + -0.5830191292785456, + 34.190835888647484, + -0.538053048982609 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0183_hard_negative_water_urban_packet.png", + "sha256": "16167f506abd1ecfef80f1268f1f93aa08ee5abf19c9213320c2c7e19ee15f25", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0183_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0183_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0183_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0183_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0183_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0183_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0183_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 59.0532, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 4.569, + "max": 5.9594, + "mean": 5.5501, + "median": 5.5593, + "p90": 5.7505 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 167123, + "min": 0.0, + "max": 56.0946, + "mean": 6.5841, + "median": 3.0153, + "p90": 16.9183 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 36, + "schools_waterpoints": 0, + "urban_landuse": 4694, + "water_surface": 0, + "waterways": 1 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0185_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0185_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..417e4d0c787c75cef019e1f9b059d8d454031c7b --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0185_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0185_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.118986513042806, + "lat": -0.6021567195771506 + }, + "bbox": [ + 34.09650223118867, + -0.6246397597251189, + 34.14147079489694, + -0.5796736794291822 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0185_hard_negative_water_urban_packet.png", + "sha256": "5d1595d63c007cc7ca8d612a0eb873fbd203763563e1ead3389d125b12f575e7", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0185_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0185_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0185_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0185_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0185_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0185_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0185_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 81.8671, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 5.3771, + "max": 6.3767, + "mean": 5.7886, + "median": 5.7776, + "p90": 6.0842 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 185209, + "min": 0.0002, + "max": 10.8395, + "mean": 2.1584, + "median": 2.0504, + "p90": 4.1237 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 12, + "schools_waterpoints": 0, + "urban_landuse": 2558, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0186_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0186_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..6506f143188e2e356b265456498f679d9f03d8d9 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0186_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0186_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.29141159475923, + "lat": -0.38809201146864475 + }, + "bbox": [ + 34.26892803883959, + -0.410575051616613, + 34.313895150678874, + -0.3656089713206765 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0186_hard_negative_water_urban_packet.png", + "sha256": "0bbcb1ecfd5f3a46320fd08aa4e7e504ae93c67ff75a8f26222278efb6f9f7b8", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0186_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0186_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0186_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0186_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0186_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0186_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0186_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 43.5666, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 3.3689, + "max": 4.6345, + "mean": 4.1467, + "median": 4.1771, + "p90": 4.3981 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 100298, + "min": 0.0, + "max": 35.0604, + "mean": 4.4123, + "median": 2.8901, + "p90": 10.106 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 10, + "schools_waterpoints": 0, + "urban_landuse": 2122, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0188_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0188_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..a89efa2005d49a8b623f1054d92b6eb103937ff0 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0188_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0188_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.2226816290467, + "lat": -0.3670711537542707 + }, + "bbox": [ + 34.20019812748797, + -0.38955419390223894, + 34.24516513060542, + -0.3445881136063024 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0188_hard_negative_water_urban_packet.png", + "sha256": "59bc830af2e465438bf326a93585d1dea3400528f55f0ecba95178ef8de7065e", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0188_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0188_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0188_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0188_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0188_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0188_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0188_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 38.6957, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.9469, + "max": 4.7778, + "mean": 3.2573, + "median": 3.2587, + "p90": 4.616 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 47982, + "min": 0.0, + "max": 12.3111, + "mean": 2.4345, + "median": 1.767, + "p90": 5.8929 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 32, + "schools_waterpoints": 2, + "urban_landuse": 1366, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0189_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0189_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..e345c02c8979bda351f55ad0452460ee624d1bc1 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0189_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0189_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.209558067517435, + "lat": -0.4480828579539216 + }, + "bbox": [ + 34.18707433981437, + -0.47056589810188987, + 34.232041795220496, + -0.42559981780595335 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0189_hard_negative_water_urban_packet.png", + "sha256": "3b9a1452f8b1fdffb2f552326a1fb19584fda9d7b1001191edcee76000483561", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0189_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0189_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0189_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0189_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0189_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0189_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0189_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 46.7278, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 4.4252, + "max": 5.3055, + "mean": 4.9432, + "median": 4.9551, + "p90": 5.16 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 169792, + "min": 0.0, + "max": 63.8617, + "mean": 12.0483, + "median": 5.6482, + "p90": 36.6497 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 72, + "schools_waterpoints": 4, + "urban_landuse": 5895, + "water_surface": 0, + "waterways": 1 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0190_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0190_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..5239a02088d7bf8ad23adb8d75f16380d8420f8c --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0190_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0190_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.320359714571104, + "lat": -0.5318100347478338 + }, + "bbox": [ + 34.29787570590352, + -0.5542930748958022, + 34.34284372323869, + -0.5093269945998655 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0190_hard_negative_water_urban_packet.png", + "sha256": "950aceb5f7c8c1dc8e2188dc575538a57e82fe40d462b4272dcd8d9cd9607b75", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0190_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0190_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0190_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0190_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0190_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0190_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0190_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 47.9823, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0003, + "max": 3.7369, + "mean": 1.1647, + "median": 0.9715, + "p90": 2.4661 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 260990, + "min": 0.0001, + "max": 34.5182, + "mean": 3.5782, + "median": 2.4737, + "p90": 7.0838 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 83, + "schools_waterpoints": 2, + "urban_landuse": 4460, + "water_surface": 1, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0193_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0193_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..006c4af17528c6aeb674a09674aaa88ac14c774d --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0193_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0193_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.33016766922026, + "lat": -0.5159988051467735 + }, + "bbox": [ + 34.30768371728855, + -0.5384818452947419, + 34.35265162115197, + -0.4935157649988053 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0193_hard_negative_water_urban_packet.png", + "sha256": "2b6bcdafa514fe61919b4526af1fc92b10afba1693f6e77dfd983602a5b3e322", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0193_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0193_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0193_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0193_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0193_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0193_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0193_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 49.4756, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 2.9932, + "mean": 1.1639, + "median": 1.0557, + "p90": 2.3264 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 256254, + "min": 0.0, + "max": 33.439, + "mean": 4.3448, + "median": 2.7479, + "p90": 9.197 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 75, + "schools_waterpoints": 5, + "urban_landuse": 4662, + "water_surface": 1, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0195_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0195_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..aab50218498ba0c112bd2e61c2e9bc81c1d1046e --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0195_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0195_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.04070754336306, + "lat": -0.4562328635496129 + }, + "bbox": [ + 34.01822379042053, + -0.47871590369758116, + 34.0631912963056, + -0.43374982340164464 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0195_hard_negative_water_urban_packet.png", + "sha256": "97e13addefc273e560b02350aadeb8ce7db9dd9fb9b2f215f987ed6e1ea723ed", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0195_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0195_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0195_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0195_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0195_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0195_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0195_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 55.0713, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.7315, + "max": 5.2382, + "mean": 3.4661, + "median": 3.6544, + "p90": 4.7059 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 195405, + "min": 0.0, + "max": 23.7199, + "mean": 2.0355, + "median": 1.3077, + "p90": 4.6138 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 9, + "schools_waterpoints": 2, + "urban_landuse": 3310, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0196_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0196_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..688995f63775d9b88f5d4654c9864cce128db207 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0196_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0196_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.37192778143882, + "lat": -0.49056329164388124 + }, + "bbox": [ + 34.349443917184736, + -0.5130463317918496, + 34.394411645692905, + -0.468080251495913 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0196_hard_negative_water_urban_packet.png", + "sha256": "6cac5146356db521dd6e9059353dbf78432c18148cbacad6816836996e2e3dd8", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0196_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0196_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0196_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0196_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0196_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0196_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0196_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 46.9329, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.7312, + "max": 4.9729, + "mean": 3.0415, + "median": 3.0334, + "p90": 4.7581 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 207032, + "min": 0.0, + "max": 10.9515, + "mean": 2.5308, + "median": 2.2413, + "p90": 4.7745 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 23, + "schools_waterpoints": 0, + "urban_landuse": 3150, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0199_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0199_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..3374888df263351c261ed812f08fe0440c136a28 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0199_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0199_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.34901314612616, + "lat": -0.5076788903451387 + }, + "bbox": [ + 34.32652922336138, + -0.530161930493107, + 34.37149706889094, + -0.48519585019717043 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0199_hard_negative_water_urban_packet.png", + "sha256": "1b4cb150d58bfe1016e8831783db612355a1015c1279baf28bc4df5d9dbdb08d", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0199_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0199_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0199_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0199_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0199_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0199_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0199_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 50.4766, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0022, + "max": 3.9281, + "mean": 1.7069, + "median": 1.6361, + "p90": 3.335 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 231943, + "min": 0.0, + "max": 14.0343, + "mean": 2.764, + "median": 2.3925, + "p90": 4.9593 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 46, + "schools_waterpoints": 0, + "urban_landuse": 3920, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0200_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0200_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..b328854fc1198fcb117147e35a3d17a1b45f18de --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0200_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0200_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.39768433082046, + "lat": -0.46298201710709813 + }, + "bbox": [ + 34.37520055663231, + -0.4854650572550664, + 34.420168105008614, + -0.4404989769591299 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0200_hard_negative_water_urban_packet.png", + "sha256": "00a18db311dfdcfe40798bd6ff0b1fd1dace254a9ae0f0f6c740455c759c9a14", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0200_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0200_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0200_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0200_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0200_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0200_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0200_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 44.4203, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.3842, + "max": 4.9493, + "mean": 2.6092, + "median": 2.6022, + "p90": 4.3387 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 118322, + "min": 0.0, + "max": 10.1969, + "mean": 2.4711, + "median": 2.172, + "p90": 4.73 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 2, + "schools_waterpoints": 0, + "urban_landuse": 2101, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0203_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0203_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..b07a9205cb16fa94ddd100c8be0c87f4f0e1964b --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0203_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0203_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.31427655524422, + "lat": -0.5705353342652998 + }, + "bbox": [ + 34.291792400383905, + -0.5930183744132681, + 34.336760710104535, + -0.5480522941173315 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0203_hard_negative_water_urban_packet.png", + "sha256": "20315c0e9936700bd904f1a0b338e16f093d0b901f9ed3c8801eadb8c3c995f8", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0203_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0203_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0203_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0203_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0203_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0203_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0203_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 45.931, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.0844, + "max": 6.5064, + "mean": 4.2629, + "median": 4.424, + "p90": 5.5367 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 206382, + "min": 0.0002, + "max": 10.2358, + "mean": 2.1034, + "median": 2.0152, + "p90": 3.7605 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 40, + "schools_waterpoints": 0, + "urban_landuse": 2473, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0205_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0205_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..56b80e171ff925271f59e2c5f97e5f2192a57836 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0205_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0205_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.4234275821929, + "lat": -0.4953629107468654 + }, + "bbox": [ + 34.400943701733496, + -0.5178459508948337, + 34.445911462652305, + -0.47287987059889713 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0205_hard_negative_water_urban_packet.png", + "sha256": "d4ac41829abb50680bcb318d90231cdc8eccca341fa6df3330243068080e0859", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0205_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0205_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0205_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0205_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0205_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0205_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0205_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 46.5078, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 2.3887, + "mean": 0.566, + "median": 0.4315, + "p90": 1.2951 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 117264, + "min": 0.0, + "max": 10.0848, + "mean": 2.0437, + "median": 1.9136, + "p90": 3.797 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 0, + "schools_waterpoints": 0, + "urban_landuse": 1825, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0206_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0206_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..8cbcaf68621c77926bd7edb56e378c3a286e96af --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0206_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0206_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.38420312056441, + "lat": -0.5517510408348455 + }, + "bbox": [ + 34.36171903790008, + -0.5742340809828138, + 34.406687203228735, + -0.5292680006868772 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0206_hard_negative_water_urban_packet.png", + "sha256": "efb23a73bd1d150f5b2afb82c864b34cbf5fb0dd6269f70c1a7e1a9f20bf297e", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0206_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0206_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0206_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0206_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0206_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0206_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0206_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 48.9163, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.7232, + "max": 9.6248, + "mean": 5.0245, + "median": 5.0181, + "p90": 8.3947 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 231161, + "min": 0.0002, + "max": 27.0745, + "mean": 2.2829, + "median": 2.0858, + "p90": 4.0655 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 16, + "schools_waterpoints": 0, + "urban_landuse": 2727, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0208_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0208_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..e85dca6636f2097acaff9ee6c969506e5913ca39 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0208_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0208_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.334095925396404, + "lat": -0.5998988045639698 + }, + "bbox": [ + 34.31161165283732, + -0.6223818447119381, + 34.35658019795549, + -0.5774157644160015 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0208_hard_negative_water_urban_packet.png", + "sha256": "2f1cc7e0413babd016a0b9a343a79a9800b903862df129aaf82a5cf2d1ca5920", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0208_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0208_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0208_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0208_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0208_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0208_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0208_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 46.9181, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 4.6685, + "max": 8.1219, + "mean": 6.7465, + "median": 6.8936, + "p90": 7.8051 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 192131, + "min": 0.0002, + "max": 9.3807, + "mean": 1.8472, + "median": 1.8367, + "p90": 3.4327 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 7, + "schools_waterpoints": 0, + "urban_landuse": 2053, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0209_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0209_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..80a600d422644a102d306830648d88bcc073ceee --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0209_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0209_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.29759261019189, + "lat": -0.3749828221354747 + }, + "bbox": [ + 34.275109088528424, + -0.39746586228344294, + 34.32007613185536, + -0.3524997819875064 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0209_hard_negative_water_urban_packet.png", + "sha256": "3b45bc88537daf9ded2e905108a99670e4a4c888a4d83cd0db1245526a179e23", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0209_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0209_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0209_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0209_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0209_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0209_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0209_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 45.3127, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.2827, + "max": 4.5735, + "mean": 3.7649, + "median": 4.1108, + "p90": 4.3556 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 136221, + "min": 0.0, + "max": 35.0539, + "mean": 3.9001, + "median": 2.6511, + "p90": 8.2012 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 12, + "schools_waterpoints": 0, + "urban_landuse": 2489, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0210_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0210_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..831cf3f872bdf89515344e87ece11c7b550b5eb2 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0210_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0210_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.316493408993765, + "lat": -0.5582946696482528 + }, + "bbox": [ + 34.294009301453855, + -0.5807777097962211, + 34.338977516533674, + -0.5358116295002845 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0210_hard_negative_water_urban_packet.png", + "sha256": "bd36cf00d1aa1eddc5b409fce2e433fa152781ff52f692e32f6d0e512e09a4a8", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0210_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0210_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0210_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0210_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0210_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0210_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0210_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 45.2386, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.9796, + "max": 6.1996, + "mean": 3.2538, + "median": 3.2568, + "p90": 4.9247 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 249641, + "min": 0.0001, + "max": 26.7241, + "mean": 2.5742, + "median": 2.1544, + "p90": 4.5947 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 66, + "schools_waterpoints": 0, + "urban_landuse": 3436, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0213_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0213_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..42321c5a068a09016db3bde5d8f8ca6584f95992 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0213_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0213_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.22444603142331, + "lat": -0.39082193921353114 + }, + "bbox": [ + 34.2019624682219, + -0.4133049793614994, + 34.246929594624724, + -0.3683388990655629 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0213_hard_negative_water_urban_packet.png", + "sha256": "4df96290022aed4393d0bdca8e52de554e9ec0bd168b355b7d7c413919071209", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0213_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0213_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0213_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0213_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0213_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0213_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0213_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 42.5619, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.2388, + "max": 4.7776, + "mean": 4.2608, + "median": 4.466, + "p90": 4.6809 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 62239, + "min": 0.0, + "max": 41.3442, + "mean": 6.3437, + "median": 3.8377, + "p90": 14.1374 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 40, + "schools_waterpoints": 3, + "urban_landuse": 2498, + "water_surface": 2, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0215_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0215_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..6f99bbb830e2883d4145746ed599bc77c733355c --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0215_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0215_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.32602879889791, + "lat": -0.5678220367232353 + }, + "bbox": [ + 34.3035446546153, + -0.5903050768712036, + 34.348512943180516, + -0.545338996575267 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0215_hard_negative_water_urban_packet.png", + "sha256": "64738fb506f188158f5bbedb3b13816fe00f3f0532e67f5709e52b8bc121d4b6", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0215_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0215_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0215_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0215_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0215_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0215_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0215_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 44.5931, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 1.8396, + "max": 7.303, + "mean": 4.3407, + "median": 4.409, + "p90": 6.1182 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 233354, + "min": 0.0002, + "max": 18.5612, + "mean": 2.2477, + "median": 2.09, + "p90": 4.0489 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 49, + "schools_waterpoints": 0, + "urban_landuse": 3097, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0216_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0216_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..5eff70a8522cf99e1da9897512ca92c3b84d734a --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0216_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0216_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.24598162112175, + "lat": -0.4715033167663671 + }, + "bbox": [ + 34.223497819663784, + -0.49398635691433535, + 34.268465422579716, + -0.44902027661839883 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0216_hard_negative_water_urban_packet.png", + "sha256": "5693678f9c2fa95a9f2ec48aea7eaa3ff093821672db10ace2aba4a8e0f8901c", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0216_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0216_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0216_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0216_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0216_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0216_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0216_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 48.8988, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.4194, + "max": 5.1372, + "mean": 2.9431, + "median": 2.9577, + "p90": 4.5798 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 205246, + "min": 0.0001, + "max": 24.048, + "mean": 1.8545, + "median": 1.6364, + "p90": 3.6825 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 30, + "schools_waterpoints": 0, + "urban_landuse": 2091, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0218_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0218_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..53740e3b39d8bc8fa1821c3481a646eabdca4119 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0218_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0218_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.12934142442796, + "lat": -0.42680712058323556 + }, + "bbox": [ + 34.10685776046885, + -0.4492901607312038, + 34.15182508838708, + -0.4043240804352673 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0218_hard_negative_water_urban_packet.png", + "sha256": "075f7160ac2fad1ec00bc8cda4090aa078a92a2893bf4a4d0fce1bad08d0c51f", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0218_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0218_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0218_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0218_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0218_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0218_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0218_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 45.4475, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.8872, + "max": 5.0877, + "mean": 4.4999, + "median": 4.9547, + "p90": 5.0158 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 88885, + "min": 0.0, + "max": 36.5592, + "mean": 4.3799, + "median": 3.4765, + "p90": 8.5989 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 43, + "schools_waterpoints": 2, + "urban_landuse": 3382, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0219_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0219_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..e614eaf05073f5c083462c943b8ae8d0d5619a2a --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0219_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0219_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.38539110755869, + "lat": -0.5368499403804379 + }, + "bbox": [ + 34.362907080446334, + -0.5593329805284062, + 34.407875134671045, + -0.5143669002324696 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0219_hard_negative_water_urban_packet.png", + "sha256": "fb6c665b75a922db4aaf548f5a6e2d24ae3163646cb1e3d81f637c43ea9dea90", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0219_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0219_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0219_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0219_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0219_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0219_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0219_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 49.8148, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0017, + "max": 6.7086, + "mean": 2.562, + "median": 2.2286, + "p90": 5.6112 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 233736, + "min": 0.0002, + "max": 32.0006, + "mean": 2.8176, + "median": 2.2145, + "p90": 5.18 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 7, + "schools_waterpoints": 0, + "urban_landuse": 3035, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0220_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0220_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..3f1bc5718e8dfbca6230e34e6ebb82e5c679d4f3 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0220_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0220_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.330431347789286, + "lat": -0.5074754928769325 + }, + "bbox": [ + 34.30794742573162, + -0.5299585330249008, + 34.35291526984695, + -0.48499245272896424 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0220_hard_negative_water_urban_packet.png", + "sha256": "5115df35261df83ea04ea3fde8b5fa82132cb12ec3ad57fed56fbf206b9aac5f", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0220_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0220_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0220_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0220_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0220_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0220_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0220_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 48.9049, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0003, + "max": 3.8067, + "mean": 1.5566, + "median": 1.4774, + "p90": 3.1 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 239770, + "min": 0.0, + "max": 33.4401, + "mean": 3.8845, + "median": 2.5802, + "p90": 7.6454 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 65, + "schools_waterpoints": 5, + "urban_landuse": 4254, + "water_surface": 1, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0223_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0223_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..120e19e6bf1d8c67b5cf68f217ce285960531acd --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0223_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0223_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.32035457524436, + "lat": -0.5151165893957043 + }, + "bbox": [ + 34.29787062642789, + -0.5375996295436726, + 34.34283852406083, + -0.492633549247736 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0223_hard_negative_water_urban_packet.png", + "sha256": "ad97c0e4be8768bac95b0188f5b0d27dbe2eec1bccf222979800748c9de96414", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0223_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0223_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0223_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0223_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0223_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0223_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0223_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 48.8335, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0002, + "max": 3.0168, + "mean": 1.0612, + "median": 0.9346, + "p90": 2.1989 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 258961, + "min": 0.0, + "max": 33.2039, + "mean": 4.6266, + "median": 2.8326, + "p90": 10.4688 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 75, + "schools_waterpoints": 6, + "urban_landuse": 4876, + "water_surface": 1, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0225_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0225_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..635c600666de0a5b68e52e95188f3ceec78cea61 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0225_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0225_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.25509497242997, + "lat": -0.5578154395197662 + }, + "bbox": [ + 34.23261086672181, + -0.5802984796677345, + 34.27757907813814, + -0.5353323993717979 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0225_hard_negative_water_urban_packet.png", + "sha256": "226cd4696f2e4a88fb3eeff99d4aa1d54f7f45d6853d18c6fbd4cc55e0d86566", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0225_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0225_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0225_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0225_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0225_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0225_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0225_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 51.1707, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 1.0957, + "max": 6.3695, + "mean": 3.7648, + "median": 3.7862, + "p90": 5.7223 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 218586, + "min": 0.0003, + "max": 13.3561, + "mean": 2.2715, + "median": 2.0332, + "p90": 4.4295 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 57, + "schools_waterpoints": 0, + "urban_landuse": 2426, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0226_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0226_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..ca951101283857e6334d1d90714cdea617fd3ecd --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0226_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0226_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.177464676856765, + "lat": -0.5268478881504298 + }, + "bbox": [ + 34.15498068617938, + -0.5493309282983981, + 34.19994866753415, + -0.5043648480024615 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0226_hard_negative_water_urban_packet.png", + "sha256": "02df8ed953224b76a71a77c81c701077badd591a752bb6a28c4210a1456948ba", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0226_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0226_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0226_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0226_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0226_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0226_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0226_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 54.2549, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 3.0364, + "max": 6.0445, + "mean": 5.2433, + "median": 5.6603, + "p90": 5.9103 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 209385, + "min": 0.0, + "max": 55.9507, + "mean": 7.0007, + "median": 3.0544, + "p90": 17.6028 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 64, + "schools_waterpoints": 1, + "urban_landuse": 5881, + "water_surface": 0, + "waterways": 1 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0229_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0229_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..7a633c747fcc5930b38eb8a5f250cd38d77754ed --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0229_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0229_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.28053358082176, + "lat": -0.499021537855937 + }, + "bbox": [ + 34.25804968790346, + -0.5215045780039053, + 34.30301747374006, + -0.47653849770796874 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0229_hard_negative_water_urban_packet.png", + "sha256": "244c3af2a68d7ec03a9e07584080665f97d5a6bee45791e0a8baf0e9916ad2c7", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0229_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0229_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0229_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0229_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0229_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0229_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0229_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 48.5339, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0003, + "max": 2.4361, + "mean": 0.5781, + "median": 0.4412, + "p90": 1.3009 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 202422, + "min": 0.0002, + "max": 16.8702, + "mean": 2.5753, + "median": 1.9667, + "p90": 6.4283 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 46, + "schools_waterpoints": 0, + "urban_landuse": 2764, + "water_surface": 1, + "waterways": 9 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 18, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0230_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0230_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..36069db041dcc3182b321fa74b79ea1ac080ea45 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0230_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0230_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.2856654271766, + "lat": -0.3837740690774266 + }, + "bbox": [ + 34.26318188267037, + -0.4062571092253949, + 34.30814897168284, + -0.36129102892945836 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0230_hard_negative_water_urban_packet.png", + "sha256": "0eca149fbf6ed6246f84a6249cf018ed3615a2867cc6f1eb629d526fbfb8da89", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0230_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0230_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0230_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0230_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0230_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0230_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0230_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 43.6596, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 3.0111, + "max": 4.5027, + "mean": 4.0286, + "median": 4.1493, + "p90": 4.3084 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 80714, + "min": 0.0, + "max": 35.0537, + "mean": 4.6696, + "median": 2.8171, + "p90": 11.8033 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 10, + "schools_waterpoints": 0, + "urban_landuse": 1735, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0233_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0233_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..ac7cd6ae3e9ecdec22ac14910ca6539f6e8bb6c8 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0233_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0233_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.33570251935936, + "lat": -0.5379684587559151 + }, + "bbox": [ + 34.31321848812992, + -0.5604514989038835, + 34.3581865505888, + -0.5154854186079468 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0233_hard_negative_water_urban_packet.png", + "sha256": "90ece656a4a9efdccbee951e68b51181ff8ecadb4423c8ba046b8be63f1a0c90", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0233_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0233_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0233_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0233_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0233_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0233_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0233_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 48.9358, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0012, + "max": 5.6693, + "mean": 1.7189, + "median": 1.4573, + "p90": 3.6263 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 260043, + "min": 0.0001, + "max": 34.3769, + "mean": 3.4961, + "median": 2.4571, + "p90": 6.9193 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 70, + "schools_waterpoints": 0, + "urban_landuse": 3972, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0235_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0235_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..ea8ca7526014d876a68cceeec6c34de159f43029 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0235_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0235_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.19215219411444, + "lat": -0.5772088757101153 + }, + "bbox": [ + 34.169668013022964, + -0.5996919158580836, + 34.21463637520592, + -0.5547258355621469 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0235_hard_negative_water_urban_packet.png", + "sha256": "b2c70673780556b49868f4b7d3051cb2367c70c2f6c8ca9e6ba47b895fcf5804", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0235_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0235_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0235_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0235_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0235_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0235_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0235_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 57.1225, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 4.2437, + "max": 6.6281, + "mean": 5.7902, + "median": 5.7924, + "p90": 6.3342 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 240118, + "min": 0.0003, + "max": 13.8223, + "mean": 2.277, + "median": 2.155, + "p90": 4.1922 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 56, + "schools_waterpoints": 0, + "urban_landuse": 3043, + "water_surface": 0, + "waterways": 3 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0236_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0236_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..9c2285def24df8f58a18173b82ba5832bd5efb7d --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0236_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0236_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.09643823260071, + "lat": -0.621971796749952 + }, + "bbox": [ + 34.07395386767664, + -0.6444548368979203, + 34.11892259752478, + -0.5994887566019836 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0236_hard_negative_water_urban_packet.png", + "sha256": "ae8199d4d81ad0595565747f8bd439b3844368c09c2770d89d4ce43720fab9d2", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0236_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0236_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0236_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0236_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0236_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0236_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0236_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 75.3445, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 5.4964, + "max": 6.1374, + "mean": 5.8281, + "median": 5.8089, + "p90": 6.0103 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 154919, + "min": 0.0001, + "max": 10.8746, + "mean": 1.5144, + "median": 1.3315, + "p90": 3.0722 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 7, + "schools_waterpoints": 0, + "urban_landuse": 1878, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0238_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0238_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..ebfe18c50219101a47332dae0f1a54629949831e --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0238_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0238_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.17684500230819, + "lat": -0.4266761813630659 + }, + "bbox": [ + 34.15436133873178, + -0.44915922151103416, + 34.1993286658846, + -0.40419314121509764 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0238_hard_negative_water_urban_packet.png", + "sha256": "ec6413adc3f684eb381c464e5c826ec1ed19434506b10f304f9f8d9f6579b8ba", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0238_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0238_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0238_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0238_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0238_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0238_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0238_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 48.5328, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.8974, + "max": 5.1773, + "mean": 4.5597, + "median": 4.9117, + "p90": 5.089 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 135792, + "min": 0.0, + "max": 38.1795, + "mean": 5.0998, + "median": 3.1965, + "p90": 10.4605 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 69, + "schools_waterpoints": 4, + "urban_landuse": 3455, + "water_surface": 9, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 2, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0239_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0239_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..21fc849ea1aa551ba31891f1e7eeeeec0a0904ab --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0239_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0239_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.204926195448145, + "lat": -0.43927741523417374 + }, + "bbox": [ + 34.18244249450302, + -0.461760455382142, + 34.22740989639327, + -0.4167943750862055 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0239_hard_negative_water_urban_packet.png", + "sha256": "84b5168c76208019b4f053681545b8975aa715fb522bae275ad68c0d5311d88e", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0239_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0239_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0239_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0239_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0239_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0239_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0239_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 43.3812, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 4.2273, + "max": 5.2509, + "mean": 4.8919, + "median": 4.9128, + "p90": 5.1055 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 122400, + "min": 0.0, + "max": 63.8333, + "mean": 15.8581, + "median": 9.741, + "p90": 40.6253 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 93, + "schools_waterpoints": 4, + "urban_landuse": 5865, + "water_surface": 9, + "waterways": 1 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0240_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0240_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..13bc96311d0430e29ac98d724789ca06e868a190 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0240_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0240_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.00796194499703, + "lat": -0.4683628156941899 + }, + "bbox": [ + 33.98547815364715, + -0.4908458558421582, + 34.030445736346906, + -0.44587977554622166 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0240_hard_negative_water_urban_packet.png", + "sha256": "2736c5cce60f23e2cecc638e14f744de8f5c2c0e34daa4e96b9dd3380843133f", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0240_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0240_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0240_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0240_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0240_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0240_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0240_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 66.9168, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 1.7406, + "max": 4.5245, + "mean": 3.4262, + "median": 3.6221, + "p90": 4.3097 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 209049, + "min": 0.0, + "max": 5.849, + "mean": 0.9993, + "median": 0.839, + "p90": 2.162 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 8, + "schools_waterpoints": 0, + "urban_landuse": 1888, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0242_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0242_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..81c53bd13fd081cdc6b0b317b5a5851f79e4f86b --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0242_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0242_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.09366156802317, + "lat": -0.5718017613532048 + }, + "bbox": [ + 34.07117740820847, + -0.5942848015011731, + 34.116145727837875, + -0.5493187212052365 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0242_hard_negative_water_urban_packet.png", + "sha256": "ccad83c7844988b14e1b0171389e032a14e26033d2783a7fe1c3d33a5f7973ca", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0242_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0242_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0242_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0242_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0242_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0242_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0242_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 50.4707, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 5.2603, + "max": 5.6711, + "mean": 5.4953, + "median": 5.4771, + "p90": 5.6344 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 151733, + "min": 0.0, + "max": 24.7591, + "mean": 2.0407, + "median": 1.7411, + "p90": 4.3787 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 13, + "schools_waterpoints": 0, + "urban_landuse": 2009, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0243_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0243_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..b928c79c3ea41903b36cd91bad7338b1731a0358 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0243_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0243_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.295280150743345, + "lat": -0.5324746473995856 + }, + "bbox": [ + 34.27279613965341, + -0.5549576875475539, + 34.31776416183328, + -0.5099916072516173 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0243_hard_negative_water_urban_packet.png", + "sha256": "c21110835236e82d23eaf1fb10924c9c15bfff74647d01e20a74d0e79901bf4b", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0243_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0243_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0243_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0243_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0243_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0243_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0243_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 45.5264, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 3.2135, + "mean": 1.0884, + "median": 0.8141, + "p90": 2.538 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 250241, + "min": 0.0001, + "max": 26.3256, + "mean": 2.4963, + "median": 2.236, + "p90": 4.5407 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 69, + "schools_waterpoints": 0, + "urban_landuse": 3446, + "water_surface": 0, + "waterways": 4 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0244_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0244_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..0072bbf63ce8b7f66adcfe8dc02bd78c423eddb6 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0244_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0244_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.29502387396984, + "lat": -0.3716935236456826 + }, + "bbox": [ + 34.272540360717045, + -0.39417656379365085, + 34.31750738722263, + -0.34921048349771433 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0244_hard_negative_water_urban_packet.png", + "sha256": "2c31da7fcffff8a2d9296a0072444bcf81f52f4aff7ab20987b993d1ac994747", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0244_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0244_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0244_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0244_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0244_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0244_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0244_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 45.178, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.0099, + "max": 4.5048, + "mean": 3.5997, + "median": 3.9311, + "p90": 4.3097 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 127857, + "min": 0.0, + "max": 35.0536, + "mean": 3.9764, + "median": 2.6681, + "p90": 8.3967 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 15, + "schools_waterpoints": 0, + "urban_landuse": 2415, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0245_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0245_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..c5d00719f44c65326ee2a4439cb0dddd1c3d0ca1 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0245_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0245_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.23909210841889, + "lat": -0.5385860999350438 + }, + "bbox": [ + 34.21660807491234, + -0.5610691400830121, + 34.26157614192544, + -0.5161030597870755 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0245_hard_negative_water_urban_packet.png", + "sha256": "b0ca5ca1c2308d7567dd1f1b7e5d8fd412160fcf6a1626cb30d8849b2d5ddc41", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0245_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0245_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0245_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0245_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0245_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0245_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0245_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 57.4966, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0019, + "max": 4.8315, + "mean": 1.9004, + "median": 1.7345, + "p90": 3.8983 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 208385, + "min": 0.0003, + "max": 13.1028, + "mean": 2.2214, + "median": 1.9199, + "p90": 4.6467 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 29, + "schools_waterpoints": 0, + "urban_landuse": 2488, + "water_surface": 1, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0246_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0246_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..3e6fd55da8a7d3318279081f9bc4631d357fecfa --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0246_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0246_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.18730269064392, + "lat": -0.39785708324702446 + }, + "bbox": [ + 34.16481910844178, + -0.4203401233949927, + 34.20978627284605, + -0.3753740430990562 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0246_hard_negative_water_urban_packet.png", + "sha256": "c107e04eb854615aacbda8a6e9e395f38dfe20d0790188e37e6604a37d2228f7", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0246_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0246_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0246_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0246_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0246_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0246_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0246_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 54.7967, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0413, + "max": 4.6225, + "mean": 2.9281, + "median": 3.1377, + "p90": 4.2781 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 183298, + "min": 0.0, + "max": 43.4589, + "mean": 8.0573, + "median": 4.452, + "p90": 23.854 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 99, + "schools_waterpoints": 6, + "urban_landuse": 7000, + "water_surface": 4, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 3, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0247_hard_negative_water_urban_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0247_hard_negative_water_urban_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..0a8ece999bd7c316caa51080816bf8fb0f3801af --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0247_hard_negative_water_urban_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0247_hard_negative_water_urban", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.42117677406804, + "lat": -0.5990805978281545 + }, + "bbox": [ + 34.398692504868606, + -0.6215636379761228, + 34.44366104326747, + -0.5765975576801862 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0247_hard_negative_water_urban_packet.png", + "sha256": "6e3d8ba82ae9f8a43400a5d338517c52c020de8d463ffa9432f6c4d5ea99eed7", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0247_hard_negative_water_urban", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0247_hard_negative_water_urban/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0247_hard_negative_water_urban/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0247_hard_negative_water_urban/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0247_hard_negative_water_urban/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0247_hard_negative_water_urban/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0247_hard_negative_water_urban/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "hard_negative_water_urban", + "packet_std": 46.1194, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 8.9159, + "max": 9.8265, + "mean": 9.3415, + "median": 9.3073, + "p90": 9.6195 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 241530, + "min": 0.0002, + "max": 24.5606, + "mean": 3.0192, + "median": 2.7085, + "p90": 5.4645 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 40, + "schools_waterpoints": 1, + "urban_landuse": 3735, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "hard_negative_water_urban", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0252_exposure_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0252_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..2834bd1cb5d65c4120d7fbbd46a9300819aded24 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0252_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0252_exposure_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.21113324582456, + "lat": -0.44100012562039825 + }, + "bbox": [ + 34.18864953968627, + -0.4634831657683665, + 34.23361695196286, + -0.41851708547243 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0252_exposure_context_packet.png", + "sha256": "fd6e816e7a38315586369ba7e96930190a7b26b6e05683865051896612e7d3f6", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0252_exposure_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0252_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0252_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0252_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0252_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0252_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0252_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 45.8399, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 4.3172, + "max": 5.2312, + "mean": 4.8565, + "median": 4.8764, + "p90": 5.0859 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 142452, + "min": 0.0, + "max": 63.8812, + "mean": 14.682, + "median": 8.534, + "p90": 39.2963 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 98, + "schools_waterpoints": 4, + "urban_landuse": 6299, + "water_surface": 0, + "waterways": 1 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 32, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0253_exposure_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0253_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..24fd54b92bad160c1ea553e8f20ce646f6f81a04 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0253_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0253_exposure_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.407968372190034, + "lat": -0.6297070221842117 + }, + "bbox": [ + 34.38548397410793, + -0.65219006233218, + 34.43045277027214, + -0.6072239820362434 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0253_exposure_context_packet.png", + "sha256": "ecf3b5a360da58bac95e558b5a9a905053e413048958518010efd1128c9862f2", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0253_exposure_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0253_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0253_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0253_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0253_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0253_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0253_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 48.9924, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 8.712, + "max": 10.5432, + "mean": 9.6251, + "median": 9.6167, + "p90": 10.1996 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 251002, + "min": 0.0003, + "max": 11.9278, + "mean": 3.094, + "median": 2.839, + "p90": 5.1376 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 15, + "schools_waterpoints": 7, + "urban_landuse": 3803, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0254_exposure_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0254_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..01be801f6133d17d6ecd06896d83659247a4b345 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0254_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0254_exposure_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.20988264976504, + "lat": -0.37815091901525616 + }, + "bbox": [ + 34.187399119930745, + -0.4006339591632244, + 34.23236617959934, + -0.3556678788672879 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0254_exposure_context_packet.png", + "sha256": "ee816c7989dd0e3260a1a78f8b7e917faf22ddbd1dd9966298bea193182bbd02", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0254_exposure_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0254_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0254_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0254_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0254_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0254_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0254_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 43.4424, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.7301, + "max": 4.7775, + "mean": 3.2129, + "median": 3.2746, + "p90": 4.6621 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 86913, + "min": 0.0, + "max": 12.3808, + "mean": 3.1227, + "median": 2.3277, + "p90": 7.4076 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 52, + "schools_waterpoints": 3, + "urban_landuse": 2748, + "water_surface": 1, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0255_exposure_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0255_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..254ea5d1db08c49e49cfd62a024a5845f15fb614 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0255_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0255_exposure_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.208030090787474, + "lat": -0.4271848458152348 + }, + "bbox": [ + 34.1855464257237, + -0.44966788596320306, + 34.23051375585125, + -0.40470180566726655 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0255_exposure_context_packet.png", + "sha256": "4418de597634496763f372d2c9220375278cef3d5c8f2063dd612c5667afb9e2", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0255_exposure_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0255_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0255_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0255_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0255_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0255_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0255_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 45.1222, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 3.3218, + "max": 5.1217, + "mean": 4.6717, + "median": 4.7328, + "p90": 4.9766 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 119166, + "min": 0.0, + "max": 63.8556, + "mean": 19.8647, + "median": 16.6842, + "p90": 41.3781 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 100, + "schools_waterpoints": 7, + "urban_landuse": 7597, + "water_surface": 3, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0256_exposure_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0256_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..87d58a5ea93af61f177fa06f774b1287ee006cc0 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0256_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0256_exposure_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.13992331524974, + "lat": -0.4278694673795585 + }, + "bbox": [ + 34.11743964818129, + -0.45035250752752676, + 34.16240698231819, + -0.40538642723159024 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0256_exposure_context_packet.png", + "sha256": "8fbaf556c54263f4eaab3c49e8a882a6e3983230837e24abe7f35798ba67d715", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0256_exposure_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0256_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0256_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0256_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0256_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0256_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0256_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 46.2489, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 3.0063, + "max": 5.1368, + "mean": 4.558, + "median": 4.9631, + "p90": 5.04 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 129694, + "min": 0.0, + "max": 30.508, + "mean": 4.224, + "median": 3.2866, + "p90": 8.4047 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 68, + "schools_waterpoints": 2, + "urban_landuse": 4217, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0259_exposure_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0259_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..9ec3723c0a842f35553b0de6bfd787b92962f61f --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0259_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0259_exposure_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.19142511910623, + "lat": -0.41241862863581863 + }, + "bbox": [ + 34.1689414964988, + -0.4349016687837869, + 34.21390874171365, + -0.38993558848785037 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0259_exposure_context_packet.png", + "sha256": "212e1b57c555d760171493ce12950e5638e518b689e5f27ce36ec23fca089d11", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0259_exposure_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0259_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0259_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0259_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0259_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0259_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0259_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 51.7019, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 1.4844, + "max": 5.0459, + "mean": 3.9804, + "median": 4.1562, + "p90": 4.921 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 181579, + "min": 0.0, + "max": 63.6789, + "mean": 9.1573, + "median": 4.4279, + "p90": 28.0937 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 137, + "schools_waterpoints": 8, + "urban_landuse": 7554, + "water_surface": 13, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0260_exposure_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0260_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..6d8f886aa2298cf0583bb02eef0535030e9eacaa --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0260_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0260_exposure_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.19637338016398, + "lat": -0.41138501661688676 + }, + "bbox": [ + 34.173889760472505, + -0.433868056764855, + 34.21885699985546, + -0.3889019764689185 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0260_exposure_context_packet.png", + "sha256": "ed0d94faf0aac799eafd359f2a886385ebc29e6738321b6accffb04aff3e5639", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0260_exposure_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0260_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0260_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0260_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0260_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0260_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0260_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 50.4487, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 1.382, + "max": 5.0364, + "mean": 4.0331, + "median": 4.2415, + "p90": 4.8771 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 168573, + "min": 0.0, + "max": 63.4231, + "mean": 8.6568, + "median": 4.2706, + "p90": 27.2273 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 132, + "schools_waterpoints": 8, + "urban_landuse": 7037, + "water_surface": 13, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0261_exposure_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0261_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..e73623e0b75c729c035102501181bd8a237834ec --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0261_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0261_exposure_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.1681423189324, + "lat": -0.41366535291685214 + }, + "bbox": [ + 34.14565869279807, + -0.4361483930648204, + 34.19062594506672, + -0.3911823127688839 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0261_exposure_context_packet.png", + "sha256": "e0d7167300e7d617b6a247c630fc126eea5e0e6b05ddb0301a33156c9530c096", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0261_exposure_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0261_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0261_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0261_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0261_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0261_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0261_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 53.4506, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 1.608, + "max": 5.0574, + "mean": 3.7601, + "median": 3.8886, + "p90": 4.9926 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 202195, + "min": 0.0, + "max": 37.1154, + "mean": 5.6562, + "median": 3.4587, + "p90": 14.076 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 144, + "schools_waterpoints": 2, + "urban_landuse": 5208, + "water_surface": 9, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0262_exposure_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0262_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..9c721a802030a1cde4deac2bf4d3a84c4765c037 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0262_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0262_exposure_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.19490826304812, + "lat": -0.41474360399898036 + }, + "bbox": [ + 34.17242463385491, + -0.4372266441469486, + 34.21739189224133, + -0.3922605638510121 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0262_exposure_context_packet.png", + "sha256": "ae035608d1c00bf0939b31695c0321cf1659ed94cab1386b368d4ff57829eec8", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0262_exposure_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0262_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0262_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0262_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0262_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0262_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0262_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 49.8883, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 1.7148, + "max": 5.0674, + "mean": 4.1578, + "median": 4.3482, + "p90": 4.9326 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 167198, + "min": 0.0, + "max": 63.8366, + "mean": 9.8987, + "median": 4.3524, + "p90": 32.9489 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 123, + "schools_waterpoints": 8, + "urban_landuse": 7461, + "water_surface": 13, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0266_exposure_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0266_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..ee3a650c14c68c4826ba493c5867c159dc530b5e --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0266_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0266_exposure_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.217323112313956, + "lat": -0.3986876928365607 + }, + "bbox": [ + 34.194839527846106, + -0.42117073298452895, + 34.239806696781805, + -0.37620465268859243 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0266_exposure_context_packet.png", + "sha256": "8245077602e4150633fd248c8427073510e6a73493ebeebd6517a10a9a5bac5f", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0266_exposure_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0266_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0266_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0266_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0266_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0266_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0266_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 44.4587, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 1.9732, + "max": 4.7752, + "mean": 4.212, + "median": 4.4895, + "p90": 4.6795 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 77540, + "min": 0.0, + "max": 43.494, + "mean": 9.5968, + "median": 4.9612, + "p90": 31.7196 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 48, + "schools_waterpoints": 4, + "urban_landuse": 3704, + "water_surface": 4, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 14, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0267_exposure_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0267_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..50c68bade1a5f13d6aa3d4c5adb6b25030fe9911 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0267_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0267_exposure_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.2014093890858, + "lat": -0.4247116422236034 + }, + "bbox": [ + 34.17892573123719, + -0.4471946823715717, + 34.223893046934414, + -0.40222860207563516 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0267_exposure_context_packet.png", + "sha256": "7730fc0b91a5aed04c85afbfe85cfe3bc60bacd619ed2feaa89abf7d1dff6a3f", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0267_exposure_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0267_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0267_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0267_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0267_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0267_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0267_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 45.0443, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.8627, + "max": 5.1368, + "mean": 4.5923, + "median": 4.7405, + "p90": 4.9916 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 128282, + "min": 0.0, + "max": 63.8214, + "mean": 17.9004, + "median": 12.0607, + "p90": 40.7839 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 117, + "schools_waterpoints": 9, + "urban_landuse": 8018, + "water_surface": 12, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0268_exposure_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0268_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..92a209fc357724b745e290ede008f3afcc23ee4c --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0268_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0268_exposure_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.36545388677416, + "lat": -0.5696530319283035 + }, + "bbox": [ + 34.34296973535901, + -0.5921360720762718, + 34.38793803818931, + -0.5471699917803352 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0268_exposure_context_packet.png", + "sha256": "c94650f2eb8ce92f612ca8a61f181c460cfadb1a83d8e48596ec999fec55042f", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0268_exposure_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0268_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0268_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0268_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0268_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0268_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0268_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 47.0016, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.8481, + "max": 9.7812, + "mean": 7.0603, + "median": 7.2102, + "p90": 9.412 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 242062, + "min": 0.0002, + "max": 27.6299, + "mean": 2.7515, + "median": 2.2804, + "p90": 5.2874 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 41, + "schools_waterpoints": 4, + "urban_landuse": 3805, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0269_exposure_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0269_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..dc798e5887dcd2aa712646184f9a12357a336ff6 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0269_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0269_exposure_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.42297796440829, + "lat": -0.6491185357941088 + }, + "bbox": [ + 34.40049348131118, + -0.6716015759420771, + 34.4454624475054, + -0.6266354956461405 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0269_exposure_context_packet.png", + "sha256": "2ac8e046ad6e4ec9957524591145deb65169db97ebcb5db5f06ccc07a1c46850", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0269_exposure_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0269_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0269_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0269_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0269_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0269_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0269_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 46.1914, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 9.2197, + "max": 11.1255, + "mean": 10.3426, + "median": 10.3559, + "p90": 10.8613 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 122844, + "min": 0.0003, + "max": 11.9262, + "mean": 3.1617, + "median": 2.9563, + "p90": 5.0764 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 9, + "schools_waterpoints": 8, + "urban_landuse": 2015, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0270_exposure_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0270_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..5eb89bcf310443e3f0696318385daf867c52ce0a --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0270_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0270_exposure_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.18294993125574, + "lat": -0.41207239219414904 + }, + "bbox": [ + 34.16046630962591, + -0.4345554323421173, + 34.20543355288557, + -0.3895893520461808 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0270_exposure_context_packet.png", + "sha256": "bc9e54dc1b190fc9e52f618867cd3da86218bffc8a1ff9c64784d2d319664c16", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0270_exposure_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0270_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0270_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0270_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0270_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0270_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0270_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 53.3807, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 1.4501, + "max": 5.0428, + "mean": 3.8145, + "median": 3.9503, + "p90": 4.9583 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 193510, + "min": 0.0, + "max": 43.4167, + "mean": 7.6959, + "median": 4.0152, + "p90": 23.1808 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 113, + "schools_waterpoints": 4, + "urban_landuse": 6331, + "water_surface": 11, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 3, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0271_exposure_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0271_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..b5c62ed41385fbdec5bd47955f142856522afd9e --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0271_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0271_exposure_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.02376489529648, + "lat": -0.4341725913556608 + }, + "bbox": [ + 34.00128120962068, + -0.45665563150362903, + 34.04624858097228, + -0.4116895512076925 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0271_exposure_context_packet.png", + "sha256": "d69450b6333093a70d5b766489c3d40723670943b45d2d29dc3d7f724d3516d0", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0271_exposure_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0271_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0271_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0271_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0271_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0271_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0271_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 46.15, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 3.7642, + "mean": 1.3174, + "median": 1.3063, + "p90": 2.616 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 121826, + "min": 0.0, + "max": 5.9504, + "mean": 1.193, + "median": 0.9952, + "p90": 2.6638 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 5, + "schools_waterpoints": 2, + "urban_landuse": 2030, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0273_exposure_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0273_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..497fb14130021fcf9c1c15f8f770e8cbcc034dff --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0273_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0273_exposure_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.179737517635274, + "lat": -0.4084043283009738 + }, + "bbox": [ + 34.15725390631171, + -0.43088736844894204, + 34.20222112895884, + -0.3859212881530055 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0273_exposure_context_packet.png", + "sha256": "7e91bbff12e242b5eea40223189da4bbbd199216984a9481e87b5793aeb95ef1", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0273_exposure_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0273_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0273_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0273_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0273_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0273_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0273_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 54.6496, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 1.0866, + "max": 5.0089, + "mean": 3.512, + "median": 3.6091, + "p90": 4.8997 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 203472, + "min": 0.0, + "max": 43.1186, + "mean": 6.8869, + "median": 3.8362, + "p90": 19.5525 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 114, + "schools_waterpoints": 4, + "urban_landuse": 6147, + "water_surface": 11, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 3, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0274_exposure_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0274_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..7c7cb5d83b01e3085be147cbc1788ac0fb5515b4 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0274_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0274_exposure_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.190408876067636, + "lat": -0.4075727134995486 + }, + "bbox": [ + 34.16792526706787, + -0.43005575364751686, + 34.2128924850674, + -0.38508967335158034 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0274_exposure_context_packet.png", + "sha256": "480c798f6f5386d65fd05d7199149e37d9f51897a0f510b639d2c0850fe3dc2e", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0274_exposure_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0274_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0274_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0274_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0274_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0274_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0274_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 53.4046, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 1.0042, + "max": 5.0013, + "mean": 3.6842, + "median": 3.8612, + "p90": 4.8231 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 190937, + "min": 0.0, + "max": 58.4259, + "mean": 8.3963, + "median": 4.3522, + "p90": 24.9633 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 2, + "major_roads": 136, + "schools_waterpoints": 6, + "urban_landuse": 7685, + "water_surface": 13, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0276_exposure_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0276_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..3ab8c6c414dae7b6dc30d6b0d3f440366b7b259a --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0276_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0276_exposure_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.197390193634675, + "lat": -0.4182843010942245 + }, + "bbox": [ + 34.174906554340865, + -0.44076734124219275, + 34.219873832928485, + -0.39580126094625623 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0276_exposure_context_packet.png", + "sha256": "178ebb70f816ce7c95d1270fd7c18fc1c0d103002a30142d2b263ae428564bd1", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0276_exposure_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0276_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0276_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0276_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0276_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0276_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0276_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 48.1077, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.0657, + "max": 5.1, + "mean": 4.3435, + "median": 4.534, + "p90": 4.9553 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 150312, + "min": 0.0, + "max": 63.8268, + "mean": 12.3791, + "median": 5.1974, + "p90": 38.414 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 122, + "schools_waterpoints": 9, + "urban_landuse": 7617, + "water_surface": 12, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0277_exposure_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0277_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..59081dd0ee0580931e4c5c84f99f526bb7a1ca31 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0277_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0277_exposure_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.431735853378804, + "lat": -0.6452161188618585 + }, + "bbox": [ + 34.409251387580106, + -0.6676991590098268, + 34.4542203191775, + -0.6227330787138902 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0277_exposure_context_packet.png", + "sha256": "624d873ee10577eacb0e557cd4d2b54936be37872adc8a577c5a8c23d6630535", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0277_exposure_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0277_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0277_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0277_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0277_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0277_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0277_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 45.3573, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 9.4131, + "max": 11.055, + "mean": 10.3081, + "median": 10.3102, + "p90": 10.8079 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 111383, + "min": 0.0003, + "max": 12.1398, + "mean": 3.2155, + "median": 3.0078, + "p90": 5.1878 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 12, + "schools_waterpoints": 8, + "urban_landuse": 1822, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0278_exposure_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0278_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..1de211473161aa6cddbc124f6db0554e9c150f56 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0278_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0278_exposure_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.14270793720569, + "lat": -0.41336767542022657 + }, + "bbox": [ + 34.12022431191445, + -0.4358507155681948, + 34.165191562496936, + -0.3908846352722583 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0278_exposure_context_packet.png", + "sha256": "477e2385fbedd031f629d8e050e54ac0d03a199d45697714ccfa8f803e55393a", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0278_exposure_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0278_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0278_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0278_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0278_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0278_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0278_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 50.6355, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 1.5756, + "max": 5.0377, + "mean": 3.6783, + "median": 3.7995, + "p90": 4.9772 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 156822, + "min": 0.0, + "max": 36.9064, + "mean": 5.1709, + "median": 3.5982, + "p90": 10.207 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 85, + "schools_waterpoints": 2, + "urban_landuse": 5030, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 1, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0279_exposure_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0279_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..59d19b043d6f3d662f8c909cd58b71e1ac58c091 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0279_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0279_exposure_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.02954880060618, + "lat": -0.44349265714660596 + }, + "bbox": [ + 34.00706508691807, + -0.4659756972945742, + 34.05203251429429, + -0.4210096169986377 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0279_exposure_context_packet.png", + "sha256": "79e4ef2e66c9f1e1d75ba093bb83c5555f5296da62fc6c86e4a0f5582ca6affc", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0279_exposure_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0279_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0279_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0279_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0279_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0279_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0279_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 49.9428, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 4.5041, + "mean": 2.1293, + "median": 2.2388, + "p90": 3.5487 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 166190, + "min": 0.0, + "max": 6.3649, + "mean": 1.201, + "median": 1.027, + "p90": 2.5881 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 6, + "schools_waterpoints": 2, + "urban_landuse": 2469, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0282_exposure_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0282_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..d0e49f9a740cc52004a327844b30ed2474c9b826 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0282_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0282_exposure_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.1694731797952, + "lat": -0.5373000462741845 + }, + "bbox": [ + 34.14698915102711, + -0.5597830864221528, + 34.19195720856329, + -0.5148170061262162 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0282_exposure_context_packet.png", + "sha256": "4a106b7087fc638ba332f6d8f26dbd3e58939c0ab2d246191d0f861bbfe4225a", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0282_exposure_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0282_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0282_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0282_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0282_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0282_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0282_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 56.2635, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 4.0018, + "max": 6.0445, + "mean": 5.558, + "median": 5.6932, + "p90": 5.9102 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 177692, + "min": 0.0, + "max": 55.9496, + "mean": 8.4667, + "median": 4.6504, + "p90": 19.5822 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 61, + "schools_waterpoints": 1, + "urban_landuse": 5949, + "water_surface": 0, + "waterways": 1 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0283_exposure_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0283_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..0ece821eb7b0eefe31ec52d725a029a4cca4e2f9 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0283_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0283_exposure_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.364384382866525, + "lat": -0.5619633183457026 + }, + "bbox": [ + 34.341900261251936, + -0.5844463584936709, + 34.386868504481114, + -0.5394802781977343 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0283_exposure_context_packet.png", + "sha256": "8a03c059a44af6cff52b2789dc47a085d63166c16cc9baae6245254174e6c5ab", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0283_exposure_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0283_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0283_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0283_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0283_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0283_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0283_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 46.8617, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 1.8294, + "max": 9.7828, + "mean": 6.0917, + "median": 6.1451, + "p90": 9.1574 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 243287, + "min": 0.0002, + "max": 19.3758, + "mean": 2.5384, + "median": 2.2007, + "p90": 4.738 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 44, + "schools_waterpoints": 3, + "urban_landuse": 3638, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0284_exposure_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0284_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..326c7cd789e39704ade514349ed7c12c5d4f5165 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0284_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0284_exposure_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.229469839163855, + "lat": -0.36939584548187687 + }, + "bbox": [ + 34.206986331742215, + -0.39187888562984513, + 34.251953346585495, + -0.3469128053339086 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0284_exposure_context_packet.png", + "sha256": "71e0cec268aee98d09394be03cd85cef958f9704b21827971cbb8e410ac1a2ce", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0284_exposure_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0284_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0284_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0284_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0284_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0284_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0284_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 41.0842, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 1.3439, + "max": 4.7774, + "mean": 3.5858, + "median": 3.7141, + "p90": 4.6322 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 50398, + "min": 0.0, + "max": 12.2539, + "mean": 2.497, + "median": 1.8126, + "p90": 6.0542 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 38, + "schools_waterpoints": 2, + "urban_landuse": 1491, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0285_exposure_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0285_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..a796956145afcb16563575034511de5f3d5118be --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0285_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0285_exposure_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.428076188897734, + "lat": -0.6319200132503687 + }, + "bbox": [ + 34.405591781253946, + -0.654403053398337, + 34.45056059654152, + -0.6094369731024004 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0285_exposure_context_packet.png", + "sha256": "6aae246d8f49ba91790357480379b6b522e77b4abc42ae7795ab61a2173cf94b", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0285_exposure_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0285_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0285_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0285_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0285_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0285_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0285_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 47.9348, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 9.3012, + "max": 10.6279, + "mean": 9.9473, + "median": 9.9206, + "p90": 10.4298 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 184471, + "min": 0.0003, + "max": 12.0266, + "mean": 3.3092, + "median": 3.0456, + "p90": 5.4088 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 14, + "schools_waterpoints": 8, + "urban_landuse": 3024, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0287_exposure_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0287_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..2319c0b2e1d2aebfbbc40182d6dffd5b3e8738da --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0287_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0287_exposure_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.42910135246752, + "lat": -0.6411385473845611 + }, + "bbox": [ + 34.40661690463219, + -0.6636215875325294, + 34.45158580030285, + -0.6186555072365928 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0287_exposure_context_packet.png", + "sha256": "6d7caeb1326aca49de7c95bdecad6a6e9f273dba989a93a7846bdb3ab407e4e4", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0287_exposure_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0287_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0287_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0287_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0287_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0287_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0287_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 46.8786, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 9.3328, + "max": 10.9153, + "mean": 10.1815, + "median": 10.1817, + "p90": 10.6832 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 138938, + "min": 0.0003, + "max": 11.9579, + "mean": 3.2233, + "median": 2.9956, + "p90": 5.2261 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 15, + "schools_waterpoints": 8, + "urban_landuse": 2271, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0288_exposure_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0288_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..ade91dffdcb4a35b8992f37e6b728f1a58acfa99 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0288_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0288_exposure_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.254866586810266, + "lat": -0.4904866983825193 + }, + "bbox": [ + 34.23238272281351, + -0.5129697385304876, + 34.27735045080702, + -0.46800365823455103 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0288_exposure_context_packet.png", + "sha256": "8e5c7cb3b3ab6869db0275fc00c423aa1cfaa89fb5d14ba8e20a175165540147", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0288_exposure_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0288_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0288_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0288_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0288_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0288_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0288_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 50.934, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0004, + "max": 4.394, + "mean": 1.4347, + "median": 1.2147, + "p90": 3.0655 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 205582, + "min": 0.0002, + "max": 10.9557, + "mean": 1.6441, + "median": 1.477, + "p90": 3.3244 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 23, + "schools_waterpoints": 1, + "urban_landuse": 1758, + "water_surface": 1, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0292_exposure_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0292_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..8e2c7bfa5590f5ac9e3b65f8647c7d31deb2a827 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0292_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0292_exposure_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.20413572571213, + "lat": -0.4030962803271171 + }, + "bbox": [ + 34.18165212913957, + -0.42557932047508534, + 34.226619322284684, + -0.3806132401791488 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0292_exposure_context_packet.png", + "sha256": "c8433ace435930846d7ec4c41848b578ac3cce08f76600a732e3e6a6dc0c4624", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0292_exposure_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0292_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0292_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0292_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0292_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0292_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0292_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 49.2616, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 1.1235, + "max": 4.922, + "mean": 3.9093, + "median": 4.1604, + "p90": 4.6867 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 137259, + "min": 0.0, + "max": 56.4258, + "mean": 8.3783, + "median": 4.6123, + "p90": 25.3984 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 2, + "major_roads": 111, + "schools_waterpoints": 7, + "urban_landuse": 6180, + "water_surface": 12, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0293_exposure_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0293_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..447d430b6b1d68fbf783dbdda0fd87309f76fe23 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0293_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0293_exposure_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.21370257807294, + "lat": -0.42535110457543757 + }, + "bbox": [ + 34.19121891836282, + -0.4478341447234058, + 34.23618623778306, + -0.4028680644274693 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0293_exposure_context_packet.png", + "sha256": "01d95311f7f3b7f405a377e1493e853b68cace2522b076f3bfb9edac2515c93e", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0293_exposure_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0293_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0293_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0293_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0293_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0293_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0293_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 45.8449, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 3.4009, + "max": 5.0725, + "mean": 4.6332, + "median": 4.6694, + "p90": 4.9274 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 112656, + "min": 0.0, + "max": 63.8328, + "mean": 20.6385, + "median": 18.0725, + "p90": 41.9093 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 99, + "schools_waterpoints": 8, + "urban_landuse": 7509, + "water_surface": 3, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 32, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0294_exposure_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0294_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..e4044253b7870dd545636b8ad734303c1fd7bf5e --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0294_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0294_exposure_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.206690740918795, + "lat": -0.3955178686026444 + }, + "bbox": [ + 34.184207165072095, + -0.41800090875061263, + 34.229174316765494, + -0.3730348284546761 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0294_exposure_context_packet.png", + "sha256": "749978e82a7bd8c90341abcfd243f9b0fc206f5c1b861b533f7ab0ea07bbe3c2", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0294_exposure_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0294_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0294_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0294_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0294_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0294_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0294_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 48.3307, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.8497, + "max": 4.7778, + "mean": 3.7308, + "median": 3.9776, + "p90": 4.6716 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 124638, + "min": 0.0, + "max": 43.4957, + "mean": 8.1165, + "median": 4.7178, + "p90": 24.1562 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 83, + "schools_waterpoints": 6, + "urban_landuse": 5482, + "water_surface": 3, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0295_exposure_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0295_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..36aef9dc6638b3d86d6c803bdf01b87b1967e016 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0295_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0295_exposure_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.21042619448949, + "lat": -0.39706286107703287 + }, + "bbox": [ + 34.18794261444939, + -0.4195459012250011, + 34.232909774529595, + -0.3745798209290646 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0295_exposure_context_packet.png", + "sha256": "236bdb1ef6d732dfeb6e4dac6566ee950ffa01e70f413f015f02da5f92805778", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0295_exposure_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0295_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0295_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0295_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0295_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0295_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0295_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 46.9578, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 1.2313, + "max": 4.7772, + "mean": 3.944, + "median": 4.1997, + "p90": 4.6822 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 108238, + "min": 0.0, + "max": 43.4567, + "mean": 8.7779, + "median": 5.2561, + "p90": 26.4501 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 68, + "schools_waterpoints": 6, + "urban_landuse": 4938, + "water_surface": 4, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 2, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0296_exposure_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0296_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..87a83c7699dec310a566b52e902f0a99291aacb9 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0296_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0296_exposure_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.21804304774934, + "lat": -0.4315354363097478 + }, + "bbox": [ + 34.195559369891754, + -0.45401847645771604, + 34.24052672560693, + -0.4090523961617795 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0296_exposure_context_packet.png", + "sha256": "ee5ab3cbc89411db200731d0547e653a199bb4dfbdb15ec4ddc6884610004753", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0296_exposure_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0296_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0296_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0296_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0296_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0296_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0296_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 45.7299, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 3.9173, + "max": 5.1046, + "mean": 4.6784, + "median": 4.6828, + "p90": 4.9595 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 127201, + "min": 0.0, + "max": 63.8677, + "mean": 18.1964, + "median": 13.2742, + "p90": 40.8374 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 102, + "schools_waterpoints": 5, + "urban_landuse": 7515, + "water_surface": 3, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 30, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0299_exposure_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0299_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..de61a7645d74c808d9a2cca8deb7cad5a321675d --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0299_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0299_exposure_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.17432599998101, + "lat": -0.5239558166038374 + }, + "bbox": [ + 34.15184201971098, + -0.5464388567518057, + 34.19680998025103, + -0.5014727764558691 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0299_exposure_context_packet.png", + "sha256": "978df948834d38548805be695910867e3a3856fa53a15d6de966e2633911f0b5", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0299_exposure_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0299_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0299_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0299_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0299_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0299_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0299_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 52.6576, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 3.4154, + "max": 6.0447, + "mean": 5.3746, + "median": 5.7055, + "p90": 5.9102 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 196035, + "min": 0.0, + "max": 56.1107, + "mean": 6.9842, + "median": 2.9076, + "p90": 17.8202 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 59, + "schools_waterpoints": 1, + "urban_landuse": 5689, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0301_exposure_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0301_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..9d9aaa6912191381d90df8fef9117cf0e2ca4fd5 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0301_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0301_exposure_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.19938887380966, + "lat": -0.410605947778482 + }, + "bbox": [ + 34.1769052563112, + -0.4330889879264503, + 34.22187249130812, + -0.38812290763051377 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0301_exposure_context_packet.png", + "sha256": "2fb797cf04f976041be4a68e38e411d9c444909338d24ca0e246316fbf203507", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0301_exposure_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0301_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0301_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0301_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0301_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0301_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0301_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 49.7129, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 1.4389, + "max": 5.0182, + "mean": 4.0713, + "median": 4.2955, + "p90": 4.8466 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 156799, + "min": 0.0, + "max": 58.8304, + "mean": 8.8199, + "median": 4.4276, + "p90": 27.6836 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 127, + "schools_waterpoints": 7, + "urban_landuse": 6705, + "water_surface": 13, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0302_exposure_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0302_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..254b2c40b996429c2f7c62aa40dad781aa0364a5 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0302_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0302_exposure_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.19963615532261, + "lat": -0.42043541710223287 + }, + "bbox": [ + 34.177152509850345, + -0.4429184572502011, + 34.22211980079487, + -0.3979523769542646 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0302_exposure_context_packet.png", + "sha256": "476b189af46ee908f04ad40b654a460dd737fba9daf09f1471bdc546486f5b63", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0302_exposure_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0302_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0302_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0302_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0302_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0302_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0302_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 46.9644, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.3864, + "max": 5.1074, + "mean": 4.4475, + "median": 4.6276, + "p90": 4.9624 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 140062, + "min": 0.0, + "max": 63.8613, + "mean": 14.4574, + "median": 6.3163, + "p90": 40.0748 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 114, + "schools_waterpoints": 9, + "urban_landuse": 7746, + "water_surface": 12, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0303_exposure_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0303_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..a3d8b9c0fbac99c0a25b239c4d2e0a29dc24daa6 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0303_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0303_exposure_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.31572580683263, + "lat": -0.5148995404434894 + }, + "bbox": [ + 34.293241858781776, + -0.5373825805914577, + 34.338209754883486, + -0.49241650029552114 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0303_exposure_context_packet.png", + "sha256": "43ee2240789f24ce3cf46e0c5fd2cf6abff1ffeceb27409320c6de45b2f6234d", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0303_exposure_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0303_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0303_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0303_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0303_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0303_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0303_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 48.2248, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0015, + "max": 3.0083, + "mean": 0.995, + "median": 0.8668, + "p90": 2.09 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 251686, + "min": 0.0003, + "max": 32.9327, + "mean": 4.4609, + "median": 2.8236, + "p90": 9.8455 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 73, + "schools_waterpoints": 6, + "urban_landuse": 4742, + "water_surface": 1, + "waterways": 1 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0304_exposure_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0304_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..1c30ea4d14de73bbe372e9fbafd816ee5d3f5fc0 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0304_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0304_exposure_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.36849713903658, + "lat": -0.575333873924144 + }, + "bbox": [ + 34.34601296534584, + -0.5978169140721123, + 34.39098131272731, + -0.5528508337761757 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0304_exposure_context_packet.png", + "sha256": "8dd95ab2ebb5147224b23819bcb8e1d293b193f441c8422e4e62687ec37f6f7b", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0304_exposure_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0304_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0304_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0304_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0304_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0304_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0304_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 47.121, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 3.7555, + "max": 9.7825, + "mean": 7.7501, + "median": 7.9326, + "p90": 9.4403 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 242144, + "min": 0.0002, + "max": 28.2967, + "mean": 2.9841, + "median": 2.3668, + "p90": 5.8381 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 34, + "schools_waterpoints": 4, + "urban_landuse": 3751, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0305_exposure_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0305_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..6468aed6f99ac7a3c732261196b3931e4c909ce9 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0305_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0305_exposure_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.41144375721829, + "lat": -0.6037357291273089 + }, + "bbox": [ + 34.38895946884317, + -0.6262187692752772, + 34.433928045593404, + -0.5812526889793406 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0305_exposure_context_packet.png", + "sha256": "857449bc080369a84555313f3dcb8471233a972590fa8ccf3d60d4c351bbcd61", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0305_exposure_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0305_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0305_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0305_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0305_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0305_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0305_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 47.3609, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 8.8164, + "max": 9.9199, + "mean": 9.3424, + "median": 9.303, + "p90": 9.6344 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 259920, + "min": 0.0002, + "max": 27.5183, + "mean": 3.4931, + "median": 2.8992, + "p90": 6.4237 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 50, + "schools_waterpoints": 1, + "urban_landuse": 4014, + "water_surface": 0, + "waterways": 4 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0306_exposure_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0306_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..4919f34889c0ececc11e449d230ba9bf8d63cd2a --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0306_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0306_exposure_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.20462958335907, + "lat": -0.4223157193001486 + }, + "bbox": [ + 34.18214593246022, + -0.44479875944811686, + 34.22711323425792, + -0.39983267915218035 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0306_exposure_context_packet.png", + "sha256": "6aaf0acf8e2615eb1a945b5f72583335a92aea9485034893f38c0d343d98ba75", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0306_exposure_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0306_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0306_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0306_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0306_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0306_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0306_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 46.0052, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.79, + "max": 5.0963, + "mean": 4.5498, + "median": 4.6863, + "p90": 4.9512 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 123394, + "min": 0.0, + "max": 63.8959, + "mean": 17.5384, + "median": 10.4698, + "p90": 41.0662 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 111, + "schools_waterpoints": 9, + "urban_landuse": 7657, + "water_surface": 11, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0309_exposure_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0309_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..51bcf4a25032b107915ac499896bf8e632be6eac --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0309_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0309_exposure_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.18130494838938, + "lat": -0.5401003551083268 + }, + "bbox": [ + 34.15882090928905, + -0.5625833952562951, + 34.203788987489716, + -0.5176173149603585 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0309_exposure_context_packet.png", + "sha256": "b157ee6c7c1363cad793569c0e817e625527997de715b5d7ca40870059fa82bc", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0309_exposure_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0309_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0309_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0309_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0309_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0309_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0309_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 57.4254, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.5729, + "max": 6.0444, + "mean": 5.144, + "median": 5.4267, + "p90": 5.9066 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 220061, + "min": 0.0003, + "max": 56.0193, + "mean": 7.1492, + "median": 3.4817, + "p90": 17.3414 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 67, + "schools_waterpoints": 1, + "urban_landuse": 6313, + "water_surface": 0, + "waterways": 1 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0312_exposure_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0312_exposure_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..6db58f2e2dc7e0e944c0c6f8926f945f8abc2217 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0312_exposure_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0312_exposure_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.33521783489006, + "lat": -0.34368875225351164 + }, + "bbox": [ + 34.312734390243584, + -0.3661717924014799, + 34.357701279536535, + -0.3212057121055434 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0312_exposure_context_packet.png", + "sha256": "5cfebba018765fb04da3fba23d2c1c433749d42d5d521ae12d1bb6693564b11d", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0312_exposure_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0312_exposure_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0312_exposure_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0312_exposure_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0312_exposure_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0312_exposure_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0312_exposure_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "exposure_context", + "packet_std": 46.1967, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 3.9515, + "mean": 1.6897, + "median": 1.6729, + "p90": 3.2829 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 86956, + "min": 0.0, + "max": 24.2623, + "mean": 3.4939, + "median": 2.8565, + "p90": 7.2076 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 47, + "schools_waterpoints": 2, + "urban_landuse": 1338, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "exposure_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0314_random_ecological_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0314_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..ae797b9c5adb11a0b19b2a9ba2e12e3954991f64 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0314_random_ecological_sidecar.json @@ -0,0 +1,144 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0314_random_ecological", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 33.96840915230586, + "lat": -0.5739764220609341 + }, + "bbox": [ + 33.94592498395803, + -0.5964594622089024, + 33.99089332065369, + -0.5514933819129658 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0314_random_ecological_packet.png", + "sha256": "e9f2254e98e44163d9a9755e7517a73e9db6618e816a58b3ae0b3e1c36e8aa2c", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0314_random_ecological", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0314_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0314_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0314_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0314_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0314_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0314_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 18.6711, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 4.1129, + "max": 4.791, + "mean": 4.3859, + "median": 4.336, + "p90": 4.67 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 0 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 0, + "schools_waterpoints": 0, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0316_random_ecological_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0316_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..8bebc3917a78d4e9a0d1dd6d049c07d5e1fa1f80 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0316_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0316_random_ecological", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.26503577346924, + "lat": -0.6119309650035224 + }, + "bbox": [ + 34.242551450975114, + -0.6344140051514907, + 34.28752009596337, + -0.5894479248555541 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0316_random_ecological_packet.png", + "sha256": "66680ba5e312879ad12a29f4ecfbe73e4b9d431dc8ab26998ac02389ae5169a4", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0316_random_ecological", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0316_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0316_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0316_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0316_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0316_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0316_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 49.7957, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 5.5237, + "max": 7.3736, + "mean": 6.2421, + "median": 6.2018, + "p90": 6.8124 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 106201, + "min": 0.0002, + "max": 10.5183, + "mean": 1.4692, + "median": 1.1633, + "p90": 3.2086 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 7, + "schools_waterpoints": 0, + "urban_landuse": 1052, + "water_surface": 1, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0317_random_ecological_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0317_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..5bbad0b8dfc6d14c6fdd7f9ce85faa41bbf5b433 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0317_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0317_random_ecological", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.43615132808139, + "lat": -0.479932373678424 + }, + "bbox": [ + 34.41366749915946, + -0.5024154138263923, + 34.458635157003314, + -0.45744933353045575 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0317_random_ecological_packet.png", + "sha256": "44dbdff7d090c589d812fbff7d5e91eb8a0824b7e2dd4d3ed8996db5c6e59f95", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0317_random_ecological", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0317_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0317_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0317_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0317_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0317_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0317_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 45.6486, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 1.7343, + "mean": 0.3161, + "median": 0.1828, + "p90": 0.8687 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 29587, + "min": 0.0, + "max": 7.9723, + "mean": 1.4937, + "median": 1.5175, + "p90": 2.7798 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 0, + "schools_waterpoints": 0, + "urban_landuse": 386, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0318_random_ecological_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0318_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..f677ebef9a100eb62aedd7e00955210681ddc5ad --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0318_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0318_random_ecological", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.429540368949375, + "lat": -0.5367119421025194 + }, + "bbox": [ + 34.407056342344376, + -0.5591949822504877, + 34.452024395554375, + -0.5142289019545511 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0318_random_ecological_packet.png", + "sha256": "cd81acb69c76446745a8bdd5bc681baee4c081d43e94caea132df9a323aa28d0", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0318_random_ecological", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0318_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0318_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0318_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0318_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0318_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0318_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 46.6407, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 6.856, + "mean": 2.8921, + "median": 2.7677, + "p90": 5.6827 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 115731, + "min": 0.0, + "max": 20.4013, + "mean": 2.7141, + "median": 1.9095, + "p90": 5.9793 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 10, + "schools_waterpoints": 0, + "urban_landuse": 2079, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0320_random_ecological_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0320_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..8217a52996154b381fbaf4f2e6ff9890e61ed6ca --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0320_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0320_random_ecological", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.31216781601407, + "lat": -0.5484026978240198 + }, + "bbox": [ + 34.28968374596501, + -0.5708857379719882, + 34.33465188606313, + -0.5259196576760515 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0320_random_ecological_packet.png", + "sha256": "e4ef884cc4b6ec8b263fe789838675ef4d611c899866b2755e49941783c6dbc9", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0320_random_ecological", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0320_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0320_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0320_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0320_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0320_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0320_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 45.4927, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0869, + "max": 5.0649, + "mean": 2.2678, + "median": 2.2634, + "p90": 4.0029 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 259161, + "min": 0.0001, + "max": 24.6222, + "mean": 2.63, + "median": 2.2263, + "p90": 4.8242 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 78, + "schools_waterpoints": 0, + "urban_landuse": 3611, + "water_surface": 0, + "waterways": 1 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0321_random_ecological_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0321_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..f9d1892ab56a387017d505e337fc938952923f3c --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0321_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0321_random_ecological", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.21010897250525, + "lat": -0.47080858017720695 + }, + "bbox": [ + 34.1876251732892, + -0.4932916203251752, + 34.23259277172131, + -0.4483255400292387 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0321_random_ecological_packet.png", + "sha256": "d9a9c63fb8a9146d3e743021209e0ba3fccf8228784a34a08ea05b31bf989cad", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0321_random_ecological", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0321_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0321_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0321_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0321_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0321_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0321_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 49.4433, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.7657, + "max": 5.3433, + "mean": 4.8452, + "median": 5.0242, + "p90": 5.2161 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 187495, + "min": 0.0, + "max": 33.6731, + "mean": 3.3498, + "median": 1.7437, + "p90": 9.2293 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 15, + "schools_waterpoints": 0, + "urban_landuse": 2320, + "water_surface": 0, + "waterways": 1 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0323_random_ecological_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0323_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..b0f14e4b421fefe1a0ea033992c8bd1866e030e1 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0323_random_ecological_sidecar.json @@ -0,0 +1,144 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0323_random_ecological", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.391288998882175, + "lat": -0.38658651875018835 + }, + "bbox": [ + 34.36880544695643, + -0.4090695588981566, + 34.41377255080792, + -0.3641034786022201 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0323_random_ecological_packet.png", + "sha256": "612d77f4c5d3bfc4ec8e9e7950cbce0fc10b01f3467d5fedd15c95476f5dd131", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0323_random_ecological", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0323_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0323_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0323_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0323_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0323_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0323_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 38.2476, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 1.0837, + "max": 5.0677, + "mean": 3.2547, + "median": 3.2875, + "p90": 4.8561 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 0 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 0, + "schools_waterpoints": 0, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0325_random_ecological_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0325_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..837bc7c24d810c022e03aa2e9e7a8001946eb45e --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0325_random_ecological_sidecar.json @@ -0,0 +1,144 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0325_random_ecological", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.126821412701716, + "lat": -0.48695275399937865 + }, + "bbox": [ + 34.10433756053417, + -0.509435794147347, + 34.14930526486926, + -0.4644697138514104 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0325_random_ecological_packet.png", + "sha256": "1f0441c2f025255a02454cb5e1ff3dddf3c63404503f1176b6ded4a4b11158a5", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0325_random_ecological", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0325_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0325_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0325_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0325_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0325_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0325_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 32.8019, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 4.9991, + "max": 5.6379, + "mean": 5.247, + "median": 5.2406, + "p90": 5.4352 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 0 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 0, + "schools_waterpoints": 0, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0326_random_ecological_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0326_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..346fc1e981cfe6b7e5f0e7fa04b6508587a8acaa --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0326_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0326_random_ecological", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.25919307487333, + "lat": -0.6081775288583952 + }, + "bbox": [ + 34.23670876806289, + -0.6306605690063635, + 34.28167738168377, + -0.5856944887104268 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0326_random_ecological_packet.png", + "sha256": "8dc8e83fc684fca8745d8c840c245dee195158d8e2e910c7225c11dbea2302b7", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0326_random_ecological", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0326_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0326_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0326_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0326_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0326_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0326_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 49.833, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 5.4537, + "max": 6.965, + "mean": 6.2098, + "median": 6.2092, + "p90": 6.659 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 137346, + "min": 0.0002, + "max": 10.4882, + "mean": 1.5361, + "median": 1.2932, + "p90": 3.2903 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 9, + "schools_waterpoints": 0, + "urban_landuse": 1511, + "water_surface": 1, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0327_random_ecological_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0327_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..46e5f0a94deeddf48d5d699dcfb663967eabb904 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0327_random_ecological_sidecar.json @@ -0,0 +1,144 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0327_random_ecological", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.09099807420028, + "lat": -0.36522517957528544 + }, + "bbox": [ + 34.06851457727076, + -0.3877082197232537, + 34.113481571129796, + -0.3427421394273172 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0327_random_ecological_packet.png", + "sha256": "0110b5a79b6029145a7812304131e4fd4f2fd842df3227c68af566bbabae9e41", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0327_random_ecological", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0327_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0327_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0327_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0327_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0327_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0327_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 21.036, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 1.2488, + "mean": 0.1736, + "median": 0.0, + "p90": 0.7936 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 0 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 0, + "schools_waterpoints": 0, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0330_random_ecological_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0330_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..b8632365a7a3f22abe2016f63d9126c21ae47bfc --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0330_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0330_random_ecological", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.4149953818512, + "lat": -0.4766659537167215 + }, + "bbox": [ + 34.39251156362983, + -0.49914899386468975, + 34.437479200072566, + -0.45418291356875323 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0330_random_ecological_packet.png", + "sha256": "587ba81a46cb2be274a9ffa242d5d4987ee503ffc46b8aafd83bb359e9ab0829", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0330_random_ecological", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0330_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0330_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0330_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0330_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0330_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0330_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 46.7157, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 3.2274, + "mean": 1.0308, + "median": 0.8281, + "p90": 2.47 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 105052, + "min": 0.0, + "max": 10.0924, + "mean": 2.031, + "median": 1.8807, + "p90": 3.9139 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 1, + "schools_waterpoints": 1, + "urban_landuse": 1584, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0332_random_ecological_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0332_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..da08269f542fdd2d7137f8c60d86e1fb9856d3b7 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0332_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0332_random_ecological", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.0692910848932, + "lat": -0.42401634359048507 + }, + "bbox": [ + 34.04680742906547, + -0.4464993837384533, + 34.091774740720936, + -0.4015333034425168 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0332_random_ecological_packet.png", + "sha256": "f04e55d8f737b216491a13c85aaa5aec69dee6bdbd04b9c7ccea2aeb9aaf9d91", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0332_random_ecological", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0332_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0332_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0332_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0332_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0332_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0332_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 21.9619, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 1.1248, + "max": 5.1564, + "mean": 3.6377, + "median": 3.6524, + "p90": 4.9882 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 2511, + "min": 0.0003, + "max": 2.81, + "mean": 0.7869, + "median": 0.6661, + "p90": 1.84 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 0, + "schools_waterpoints": 0, + "urban_landuse": 23, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0333_random_ecological_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0333_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..57bd7296a9b4e8317e4dad9b523146412ece025a --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0333_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0333_random_ecological", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.12391331787103, + "lat": -0.4453566726840423 + }, + "bbox": [ + 34.10142959850905, + -0.46783971283201053, + 34.14639703723301, + -0.422873632536074 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0333_random_ecological_packet.png", + "sha256": "59e63e93d40537f7c3b4298fec2e7e0a2ab5968588a4e20d40d5a98eb42c11a1", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0333_random_ecological", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0333_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0333_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0333_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0333_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0333_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0333_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 34.7401, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 4.6989, + "max": 5.2218, + "mean": 5.0106, + "median": 5.0054, + "p90": 5.0943 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 26917, + "min": 0.0, + "max": 11.5486, + "mean": 4.1133, + "median": 3.7956, + "p90": 8.3142 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 10, + "schools_waterpoints": 0, + "urban_landuse": 1222, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0334_random_ecological_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0334_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..b1a8ff3cb4f71234bb742d452f2c92bd290f9ec6 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0334_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0334_random_ecological", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.155052298958516, + "lat": -0.36812158798492994 + }, + "bbox": [ + 34.13256879475516, + -0.3906046281328982, + 34.177535803161874, + -0.3456385478369617 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0334_random_ecological_packet.png", + "sha256": "3adff20d4e93bcd41fa48adbefbd763ee41cb5f48390eafb51bfb424a35e9d51", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0334_random_ecological", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0334_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0334_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0334_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0334_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0334_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0334_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 35.5925, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 1.7014, + "mean": 0.2735, + "median": 0.0, + "p90": 1.107 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 29409, + "min": 0.0, + "max": 34.0395, + "mean": 5.5255, + "median": 4.215, + "p90": 10.5603 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 5, + "schools_waterpoints": 0, + "urban_landuse": 1136, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0335_random_ecological_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0335_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..5f8ef64a950d17a93137e8bcf8a89847f73acec3 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0335_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0335_random_ecological", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.17606039155898, + "lat": -0.5170474346720103 + }, + "bbox": [ + 34.153576435917465, + -0.5395304748199786, + 34.19854434720049, + -0.49456439452404205 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0335_random_ecological_packet.png", + "sha256": "c8a3c2000e1948717fcd051f017b79a94bfae111e58cb7fc3b7509d7eb636605", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0335_random_ecological", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0335_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0335_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0335_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0335_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0335_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0335_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 53.5642, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 3.2046, + "max": 6.0449, + "mean": 5.2898, + "median": 5.6165, + "p90": 5.9103 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 193612, + "min": 0.0003, + "max": 55.8048, + "mean": 4.2827, + "median": 2.2406, + "p90": 10.864 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 43, + "schools_waterpoints": 1, + "urban_landuse": 3544, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0336_random_ecological_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0336_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..e043cd77f946f23206b4ecdf20455428adc149d1 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0336_random_ecological_sidecar.json @@ -0,0 +1,144 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0336_random_ecological", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.11287107668116, + "lat": -0.35981433728794765 + }, + "bbox": [ + 34.09038759318612, + -0.3822973774359159, + 34.1353545601762, + -0.3373312971399794 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0336_random_ecological_packet.png", + "sha256": "4699afeef695fbc412fc1343070247131d8fc22ae55a2349e7d75cb0e9a00141", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0336_random_ecological", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0336_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0336_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0336_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0336_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0336_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0336_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 25.4222, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.719, + "mean": 0.0583, + "median": 0.0, + "p90": 0.275 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 0 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 0, + "schools_waterpoints": 0, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0338_random_ecological_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0338_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..0062f8e60746146e270c714a321369976222590a --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0338_random_ecological_sidecar.json @@ -0,0 +1,144 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0338_random_ecological", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 33.99169812809748, + "lat": -0.40600684482531646 + }, + "bbox": [ + 33.9692145234604, + -0.4284898849732847, + 34.01418173273456, + -0.3835238046773482 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0338_random_ecological_packet.png", + "sha256": "5cd4a30b32e7fd5706e5830b2594cabfbb6250202a0a0f6ddb82a05d560b472d", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0338_random_ecological", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0338_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0338_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0338_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0338_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0338_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0338_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 18.0084, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.2871, + "mean": 0.0113, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 0 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 0, + "schools_waterpoints": 0, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0339_random_ecological_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0339_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..c3dacce3d73d50d8755b90747e0c75d8cdf4f265 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0339_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0339_random_ecological", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.29703520630182, + "lat": -0.6035346812183341 + }, + "bbox": [ + 34.27455091875794, + -0.6260177213663024, + 34.3195194938457, + -0.5810516410703658 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0339_random_ecological_packet.png", + "sha256": "73e3a1f56e52b84f2c9c98fd8c328ec88aaf344e90784d273f50e17728e47e86", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0339_random_ecological", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0339_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0339_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0339_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0339_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0339_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0339_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 54.9137, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 4.9572, + "max": 7.5615, + "mean": 6.0213, + "median": 5.968, + "p90": 6.7752 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 5599, + "min": 0.0003, + "max": 2.1651, + "mean": 0.2791, + "median": 0.1107, + "p90": 0.8724 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 1, + "schools_waterpoints": 0, + "urban_landuse": 4, + "water_surface": 1, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0340_random_ecological_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0340_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..8dc445c2423332a101065512753aac40a6943429 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0340_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0340_random_ecological", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.41998931489824, + "lat": -0.5238803562568961 + }, + "bbox": [ + 34.397505334899, + -0.5463633964048644, + 34.442473294897475, + -0.5013973161089278 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0340_random_ecological_packet.png", + "sha256": "00d3ebaf83c677b91ef71d2dfb4d96fd1947c9b3ec093b505c8fde5ece42f678", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0340_random_ecological", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0340_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0340_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0340_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0340_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0340_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0340_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 50.0679, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 4.7338, + "mean": 1.2732, + "median": 0.8077, + "p90": 3.2971 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 160129, + "min": 0.0, + "max": 18.2744, + "mean": 2.1147, + "median": 1.9322, + "p90": 4.0134 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 5, + "schools_waterpoints": 0, + "urban_landuse": 2539, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0341_random_ecological_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0341_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..24e125974168dd13b0c8e6e804188cfeccbce13a --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0341_random_ecological_sidecar.json @@ -0,0 +1,144 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0341_random_ecological", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.04940026895992, + "lat": -0.38758008285351764 + }, + "bbox": [ + 34.02691671440011, + -0.4100631230014859, + 34.071883823519734, + -0.3650970427055494 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0341_random_ecological_packet.png", + "sha256": "156d644f46c5931a216937c5ce3b6859c02546fea1e0b2053918c38d1671efc6", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0341_random_ecological", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0341_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0341_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0341_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0341_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0341_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0341_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 18.5799, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 3.1771, + "mean": 0.646, + "median": 0.398, + "p90": 1.7416 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 0 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 0, + "schools_waterpoints": 0, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0342_random_ecological_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0342_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..c474aea29987f391bc7a582c7b5ed10a3498ab4e --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0342_random_ecological_sidecar.json @@ -0,0 +1,144 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0342_random_ecological", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 33.98010087073415, + "lat": -0.38145061964051225 + }, + "bbox": [ + 33.95761733231652, + -0.4039336597884805, + 34.00258440915178, + -0.358967579492544 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0342_random_ecological_packet.png", + "sha256": "61bc1b6643b4fceb154b0e3aaab5f3cbd3c5586e9198b48171ce46fb4c74ca96", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0342_random_ecological", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0342_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0342_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0342_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0342_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0342_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0342_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 20.0679, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 0 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 0, + "schools_waterpoints": 0, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0344_random_ecological_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0344_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..74d63932b0524312e732b67f2af8604d719e1ff1 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0344_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0344_random_ecological", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.24687221869651, + "lat": -0.3547084738834754 + }, + "bbox": [ + 34.22438874769483, + -0.37719151403144363, + 34.26935568969819, + -0.3322254337355071 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0344_random_ecological_packet.png", + "sha256": "c6ffd6b21548f6b2afb9a9e63ad8bb82a16a4db15aa923cd09182df2b3597e52", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0344_random_ecological", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0344_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0344_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0344_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0344_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0344_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0344_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 38.2196, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.6128, + "max": 4.7773, + "mean": 2.6687, + "median": 2.6701, + "p90": 4.2692 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 11499, + "min": 0.0, + "max": 5.0301, + "mean": 0.3406, + "median": 0.0, + "p90": 1.5036 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 0, + "schools_waterpoints": 0, + "urban_landuse": 112, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0346_random_ecological_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0346_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..38cc9ca3a0b530043a88b87381b49d168df34053 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0346_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0346_random_ecological", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.31283769632629, + "lat": -0.4805213941901049 + }, + "bbox": [ + 34.290353865467, + -0.5030044343380732, + 34.335321527185585, + -0.45803835404213666 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0346_random_ecological_packet.png", + "sha256": "5a80b7176e6197ad6e1a7d4264e15f99d0ad2aa78a24d6c743932b2bb0bd2842", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0346_random_ecological", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0346_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0346_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0346_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0346_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0346_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0346_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 47.6769, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.6103, + "max": 4.7189, + "mean": 2.8215, + "median": 2.7304, + "p90": 4.4944 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 176891, + "min": 0.0, + "max": 33.0701, + "mean": 3.5348, + "median": 2.1977, + "p90": 7.5699 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 43, + "schools_waterpoints": 4, + "urban_landuse": 2989, + "water_surface": 0, + "waterways": 7 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0347_random_ecological_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0347_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..a47f0a5f496daa6add795f03ead78b967ee99cdb --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0347_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0347_random_ecological", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.13044476665083, + "lat": -0.4402216389883115 + }, + "bbox": [ + 34.10796106286183, + -0.4627046791362798, + 34.15292847043983, + -0.41773859884034326 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0347_random_ecological_packet.png", + "sha256": "5bba3cc9b9081cc9e36857ee08abb2a4b5a4f0f2ae98dd85cb225cc1209c2002", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0347_random_ecological", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0347_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0347_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0347_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0347_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0347_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0347_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 38.3835, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 4.2081, + "max": 5.1674, + "mean": 4.9443, + "median": 4.9931, + "p90": 5.0729 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 55808, + "min": 0.0, + "max": 11.7275, + "mean": 3.9376, + "median": 3.6679, + "p90": 7.835 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 1, + "major_roads": 32, + "schools_waterpoints": 2, + "urban_landuse": 2217, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0348_random_ecological_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0348_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..efb5c823d4d184f7f416bc448111f1df468bd2ec --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0348_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0348_random_ecological", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.30182647556912, + "lat": -0.6289835159186308 + }, + "bbox": [ + 34.279342080605794, + -0.6514665560665991, + 34.32431087053245, + -0.6065004757706625 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0348_random_ecological_packet.png", + "sha256": "2e4fda525c5fef3381d61d49b6f2ef8c81e6cf386920543b3270fd4ad98d10cf", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0348_random_ecological", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0348_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0348_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0348_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0348_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0348_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0348_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 54.884, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 5.8873, + "max": 9.0214, + "mean": 7.3447, + "median": 7.3221, + "p90": 8.4661 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 361, + "min": 0.1107, + "max": 0.1107, + "mean": 0.1107, + "median": 0.1107, + "p90": 0.1107 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 0, + "schools_waterpoints": 0, + "urban_landuse": 0, + "water_surface": 1, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0351_random_ecological_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0351_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..98a3f320120c59656983fdc9efef4ef5d0a718c0 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0351_random_ecological_sidecar.json @@ -0,0 +1,144 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0351_random_ecological", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 33.97046883396998, + "lat": -0.36037400593040647 + }, + "bbox": [ + 33.94798534909465, + -0.38285704607837473, + 33.99295231884531, + -0.3378909657824382 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0351_random_ecological_packet.png", + "sha256": "cbf00d87e4273b91d63cb90cd6551fd2db61e4aee8c6aefd0231c2601e1a7550", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0351_random_ecological", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0351_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0351_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0351_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0351_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0351_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0351_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 20.1291, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 0 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 0, + "schools_waterpoints": 0, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0352_random_ecological_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0352_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..a6d303734d2d0a2ed01524084cb52ca9dfc91e98 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0352_random_ecological_sidecar.json @@ -0,0 +1,144 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0352_random_ecological", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 33.9961904350558, + "lat": -0.5830870062756538 + }, + "bbox": [ + 33.9737062306069, + -0.6055700464236221, + 34.0186746395047, + -0.5606039661276855 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0352_random_ecological_packet.png", + "sha256": "942a9e03e12c5f15ffbb420129ecc4677cbedae01e0c90b2dc5e6f8b63584da1", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0352_random_ecological", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0352_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0352_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0352_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0352_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0352_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0352_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 18.8365, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 4.113, + "max": 5.0763, + "mean": 4.5467, + "median": 4.5164, + "p90": 4.8797 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 0 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 0, + "schools_waterpoints": 0, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0353_random_ecological_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0353_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..67fde47856730ec3faa727197c674d929165d37c --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0353_random_ecological_sidecar.json @@ -0,0 +1,144 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0353_random_ecological", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 33.95275835597653, + "lat": -0.5608172259471282 + }, + "bbox": [ + 33.930274238768796, + -0.5833002660950966, + 33.97524247318426, + -0.5383341857991599 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0353_random_ecological_packet.png", + "sha256": "097e8210a0d76c87f9da645820eb57a07d2b88c466ecb406d354e170c73ff767", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0353_random_ecological", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0353_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0353_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0353_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0353_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0353_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0353_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 19.9349, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 4.1127, + "max": 4.5952, + "mean": 4.3685, + "median": 4.3796, + "p90": 4.4724 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 0 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 0, + "schools_waterpoints": 0, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0354_random_ecological_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0354_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..a6df0e9554cce36f124442dc9715803692b3e3fb --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0354_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0354_random_ecological", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.190384518608035, + "lat": -0.5467156058457181 + }, + "bbox": [ + 34.16790045488619, + -0.5691986459936864, + 34.21286858232988, + -0.5242325656977498 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0354_random_ecological_packet.png", + "sha256": "ef23c345fa21f1166328b1224353be93592a082cb0cd8b04018e199b01844f7c", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0354_random_ecological", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0354_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0354_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0354_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0354_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0354_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0354_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 58.6072, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 1.4741, + "max": 6.0448, + "mean": 4.8415, + "median": 5.1656, + "p90": 5.7643 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 243258, + "min": 0.0003, + "max": 53.7646, + "mean": 5.4874, + "median": 2.7868, + "p90": 13.7408 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 74, + "schools_waterpoints": 1, + "urban_landuse": 5308, + "water_surface": 0, + "waterways": 4 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0355_random_ecological_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0355_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..5340b871533792f94680935e7e4450f5267d7c7c --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0355_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0355_random_ecological", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.0987121625663, + "lat": -0.44741963668226026 + }, + "bbox": [ + 34.07622843689713, + -0.4699026768302285, + 34.12119588823547, + -0.424936596534292 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0355_random_ecological_packet.png", + "sha256": "ad5c461e0febe0f00545c82acd84532962f3194e028353c6fae4a0fcbf972001", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0355_random_ecological", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0355_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0355_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0355_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0355_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0355_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0355_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 30.453, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 4.8437, + "max": 5.4862, + "mean": 5.0806, + "median": 5.0554, + "p90": 5.2673 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 1563, + "min": 0.0, + "max": 2.1141, + "mean": 0.4009, + "median": 0.1623, + "p90": 1.2581 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 0, + "schools_waterpoints": 0, + "urban_landuse": 14, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0357_random_ecological_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0357_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..c47371e5f038a80ec87cf356e50ee928c25560aa --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0357_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0357_random_ecological", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.421976534698544, + "lat": -0.619352492231249 + }, + "bbox": [ + 34.39949218090956, + -0.6418355323792173, + 34.44446088848753, + -0.5968694520832807 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0357_random_ecological_packet.png", + "sha256": "2803cac6f2e1dd364625feb8eec5d618a5b30645a982829c0faeea43c4d0715b", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0357_random_ecological", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0357_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0357_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0357_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0357_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0357_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0357_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 47.8281, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 9.1309, + "max": 10.292, + "mean": 9.6338, + "median": 9.5872, + "p90": 10.0642 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 237489, + "min": 0.0003, + "max": 12.6737, + "mean": 3.3195, + "median": 3.0247, + "p90": 5.5717 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 28, + "schools_waterpoints": 3, + "urban_landuse": 3849, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0358_random_ecological_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0358_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..3af26eae03ec4c4f0debb47865acfd6b38fdd452 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0358_random_ecological_sidecar.json @@ -0,0 +1,144 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0358_random_ecological", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.013872043512436, + "lat": -0.6204136190187697 + }, + "bbox": [ + 33.99138768521809, + -0.642896659166738, + 34.03635640180678, + -0.5979305788708014 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0358_random_ecological_packet.png", + "sha256": "da45c4db8a0dae135df797d595b924b8006999ac1f4ab5d157a6a4f10ef07b00", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0358_random_ecological", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0358_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0358_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0358_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0358_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0358_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0358_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 30.3273, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 4.7865, + "max": 5.4922, + "mean": 5.1518, + "median": 5.1597, + "p90": 5.4011 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 0 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 0, + "schools_waterpoints": 0, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0359_random_ecological_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0359_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..edadf9e22e4c70c38f7af987eaa75ac2bbc67e64 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0359_random_ecological_sidecar.json @@ -0,0 +1,144 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0359_random_ecological", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.02287229810096, + "lat": -0.3446107115338157 + }, + "bbox": [ + 34.000388851281365, + -0.36709375168178393, + 34.04535574492055, + -0.3221276713858474 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0359_random_ecological_packet.png", + "sha256": "75c059472ba6fad57708c7cd76d58cd591d38ba2b5c5ba3a89ecbf2a1ad98831", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0359_random_ecological", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0359_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0359_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0359_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0359_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0359_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0359_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 32.247, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 0 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 0, + "schools_waterpoints": 0, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0362_random_ecological_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0362_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..9dc6935c026491acf6d545036fc08bb42b134ae3 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0362_random_ecological_sidecar.json @@ -0,0 +1,144 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0362_random_ecological", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.140235194887886, + "lat": -0.34364403305094765 + }, + "bbox": [ + 34.11775175034666, + -0.3661270731989159, + 34.16271863942911, + -0.3211609929029794 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0362_random_ecological_packet.png", + "sha256": "a19172a17bfd7db3557be055550db5aadeff6acb1561cf888d4109b0fae66a68", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0362_random_ecological", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0362_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0362_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0362_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0362_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0362_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0362_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 26.8537, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 0.0, + "mean": 0.0, + "median": 0.0, + "p90": 0.0 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 0 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 0, + "schools_waterpoints": 0, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0363_random_ecological_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0363_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..2e2a6aee08453f828f3e6452a55acc48e4634e0e --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0363_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0363_random_ecological", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.378753220166686, + "lat": -0.4330992724027074 + }, + "bbox": [ + 34.356269537678635, + -0.45558231255067566, + 34.40123690265474, + -0.41061623225473914 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0363_random_ecological_packet.png", + "sha256": "ebdc4ade9fca9fafddae26ea35564d356de523d621bfd2e437371be38fce6421", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0363_random_ecological", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0363_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0363_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0363_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0363_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0363_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0363_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 35.3593, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.2301, + "max": 4.8601, + "mean": 4.0423, + "median": 4.4035, + "p90": 4.806 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 6070, + "min": 0.0, + "max": 4.4731, + "mean": 0.6498, + "median": 0.1562, + "p90": 2.0838 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 0, + "schools_waterpoints": 0, + "urban_landuse": 142, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0364_random_ecological_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0364_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..bb7447f45bba59f98da79844cff1a2a50445a546 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0364_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0364_random_ecological", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.305886103146264, + "lat": -0.5407447055527479 + }, + "bbox": [ + 34.28340206166088, + -0.5632277457007162, + 34.32837014463165, + -0.5182616654047796 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0364_random_ecological_packet.png", + "sha256": "392a5d994fb38f46790944cb7350fb8ab1ac567f4a8c58b2a33699c1c70587b3", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0364_random_ecological", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0364_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0364_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0364_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0364_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0364_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0364_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 46.3988, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0003, + "max": 3.9592, + "mean": 1.5997, + "median": 1.5205, + "p90": 3.2574 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 259287, + "min": 0.0001, + "max": 10.2546, + "mean": 2.4784, + "median": 2.2438, + "p90": 4.4801 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 82, + "schools_waterpoints": 0, + "urban_landuse": 3689, + "water_surface": 0, + "waterways": 3 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0365_random_ecological_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0365_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..5e333202b73ecd07b751dc6c19e1b953101c5071 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0365_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0365_random_ecological", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.01273164321161, + "lat": -0.40630656064660076 + }, + "bbox": [ + 33.990248037740784, + -0.428789600794569, + 34.035215248682434, + -0.3838235204986325 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0365_random_ecological_packet.png", + "sha256": "5d0a1a8ce813924ad3ad96ecaabe1fe5bc4a0adcee1ff94424bb23cfdfb8618a", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0365_random_ecological", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0365_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0365_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0365_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0365_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0365_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0365_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 21.0621, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 1.2442, + "mean": 0.083, + "median": 0.0, + "p90": 0.3075 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 8216, + "min": 0.0, + "max": 2.4722, + "mean": 0.5661, + "median": 0.2549, + "p90": 1.4752 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 1, + "schools_waterpoints": 0, + "urban_landuse": 160, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0368_random_ecological_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0368_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..fabc6cd8661d093e3f972aa857f250e55d3405c5 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0368_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0368_random_ecological", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.43980701862138, + "lat": -0.5076278713348776 + }, + "bbox": [ + 34.417323096033996, + -0.530110911482846, + 34.462290941208764, + -0.4851448311869094 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0368_random_ecological_packet.png", + "sha256": "ae4f7dc232e338c8d189b0aef9f95cb7918b3f11b8b027b848bff0d9f64285fc", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0368_random_ecological", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0368_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0368_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0368_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0368_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0368_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0368_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 44.8593, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 4.0507, + "mean": 1.0094, + "median": 0.7744, + "p90": 2.3385 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 39498, + "min": 0.0, + "max": 10.9296, + "mean": 1.7077, + "median": 1.5572, + "p90": 3.3707 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 0, + "schools_waterpoints": 0, + "urban_landuse": 618, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0369_random_ecological_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0369_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..e2d5d68325f2a2a04c498dbf2e7dc6ee56707272 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0369_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0369_random_ecological", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.026223278136065, + "lat": -0.45384500396044325 + }, + "bbox": [ + 34.003739532635535, + -0.4763280441084115, + 34.048707023636595, + -0.431361963812475 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0369_random_ecological_packet.png", + "sha256": "79460b6763b96b03835541927118f5b2fa40ec5a79164ec57ef75fef9cb69f5b", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0369_random_ecological", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0369_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0369_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0369_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0369_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0369_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0369_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 58.1099, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.5329, + "max": 4.8328, + "mean": 2.7568, + "median": 2.8296, + "p90": 4.1425 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 206649, + "min": 0.0, + "max": 5.9492, + "mean": 1.1064, + "median": 0.9412, + "p90": 2.3212 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 5, + "schools_waterpoints": 2, + "urban_landuse": 2354, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0370_random_ecological_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0370_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..4ce62d06b3744a9cdaa44312ccc9c90fbf2cebdb --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0370_random_ecological_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0370_random_ecological", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.368130846348905, + "lat": -0.3520816195254444 + }, + "bbox": [ + 34.34564738170522, + -0.3745646596734127, + 34.39061431099259, + -0.32959857937747616 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0370_random_ecological_packet.png", + "sha256": "872811455ac94274ba924b6468a3d534ff501bf756884e75850074e9f993f3b7", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0370_random_ecological", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0370_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0370_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0370_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0370_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0370_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0370_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 38.0039, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.4291, + "max": 5.0184, + "mean": 2.6294, + "median": 2.6229, + "p90": 4.2431 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 2327, + "min": 0.0, + "max": 2.1666, + "mean": 0.5844, + "median": 0.2901, + "p90": 1.6082 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 2, + "schools_waterpoints": 0, + "urban_landuse": 17, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0371_random_ecological_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0371_random_ecological_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..d1128a8f509a7be8c4a81c2bbcdc904cca7dd905 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0371_random_ecological_sidecar.json @@ -0,0 +1,144 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0371_random_ecological", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.092597950694056, + "lat": -0.42965569785131624 + }, + "bbox": [ + 34.07011427838013, + -0.4521387379992845, + 34.11508162300798, + -0.407172657703348 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0371_random_ecological_packet.png", + "sha256": "4c7edb6985befadfd6de1a92f0070b8efe060ef19977db96ccea3e89ff27fb74", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0371_random_ecological", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0371_random_ecological/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0371_random_ecological/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0371_random_ecological/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0371_random_ecological/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0371_random_ecological/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0371_random_ecological/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "random_ecological", + "packet_std": 26.336, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 2.8179, + "max": 5.2386, + "mean": 4.5975, + "median": 4.9224, + "p90": 5.0898 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 0 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 0, + "schools_waterpoints": 0, + "urban_landuse": 0, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "random_ecological", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0378_uncertain_sparse_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0378_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..0681d6faf4e2316cf49bed2ee1864daffb5da873 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0378_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0378_uncertain_sparse_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.17685940739068, + "lat": -0.4102792804139443 + }, + "bbox": [ + 34.15437579081052, + -0.43276232056191255, + 34.19934302397084, + -0.38779624026597603 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0378_uncertain_sparse_context_packet.png", + "sha256": "970df747646c6e98e67eacd4117bb162770d07735d5f4dbfe51fb7ded2544c4d", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0378_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0378_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0378_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0378_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0378_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0378_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0378_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 54.4445, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 1.2724, + "max": 5.0262, + "mean": 3.6034, + "median": 3.7006, + "p90": 4.9569 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 205319, + "min": 0.0, + "max": 38.1028, + "mean": 6.2716, + "median": 3.6459, + "p90": 17.3619 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 124, + "schools_waterpoints": 4, + "urban_landuse": 5633, + "water_surface": 10, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 2, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0379_uncertain_sparse_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0379_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..4558e9ac999becfafbbfe4e17d2a1e9108c937d3 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0379_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0379_uncertain_sparse_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.41822852733383, + "lat": -0.5419791677263285 + }, + "bbox": [ + 34.395744481271166, + -0.5644622078742968, + 34.440712573396496, + -0.5194961275783602 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0379_uncertain_sparse_context_packet.png", + "sha256": "a73b48a42a53f0149db49b33dd7ef16ed820df7975b262b98796cfb43ffc6223", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0379_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0379_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0379_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0379_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0379_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0379_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0379_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 44.7012, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 7.4409, + "mean": 3.3258, + "median": 3.2777, + "p90": 6.4449 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 191082, + "min": 0.0002, + "max": 23.4673, + "mean": 2.9611, + "median": 2.1752, + "p90": 6.3448 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 9, + "schools_waterpoints": 0, + "urban_landuse": 3311, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0380_uncertain_sparse_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0380_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..b9a100bdc02f6787689dd5c60b9cc9158533c858 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0380_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0380_uncertain_sparse_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.11336571855809, + "lat": -0.5505912913002777 + }, + "bbox": [ + 34.090881640271945, + -0.573074331448246, + 34.13584979684424, + -0.5281082511523094 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0380_uncertain_sparse_context_packet.png", + "sha256": "eb392ee0540b7a8b925740c396b868df820bec73b7761c4ab2e1c2ebd591d9b6", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0380_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0380_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0380_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0380_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0380_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0380_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0380_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 44.9194, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 5.2113, + "max": 5.6979, + "mean": 5.4297, + "median": 5.4151, + "p90": 5.5417 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 113024, + "min": 0.0, + "max": 34.621, + "mean": 3.9405, + "median": 2.6559, + "p90": 9.1362 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 51, + "schools_waterpoints": 0, + "urban_landuse": 1893, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0381_uncertain_sparse_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0381_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..2e5af5d306a3c691dda07b04fe24a663ec446df2 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0381_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0381_uncertain_sparse_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.23543068515336, + "lat": -0.5906730162795308 + }, + "bbox": [ + 34.21294645021074, + -0.6131560564274992, + 34.257914920095985, + -0.5681899761315625 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0381_uncertain_sparse_context_packet.png", + "sha256": "16be96e11bc5963c715e71e09d9ef5bc04c370e1823e066403bbddee6ad02371", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0381_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0381_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0381_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0381_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0381_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0381_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0381_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 53.106, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 4.9456, + "max": 6.9164, + "mean": 6.3192, + "median": 6.3801, + "p90": 6.7295 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 166280, + "min": 0.0002, + "max": 9.9308, + "mean": 1.3688, + "median": 1.1949, + "p90": 2.8398 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 7, + "schools_waterpoints": 0, + "urban_landuse": 1396, + "water_surface": 1, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0382_uncertain_sparse_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0382_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..6bba6834fc3925e995ca5a44da3d4587641d9f10 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0382_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0382_uncertain_sparse_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.19717441888282, + "lat": -0.43636604320614875 + }, + "bbox": [ + 34.17469072666793, + -0.458849083354117, + 34.2196581110977, + -0.4138830030581805 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0382_uncertain_sparse_context_packet.png", + "sha256": "42c1332939553c644f87a531b1bef0439fd60f72519b56ba6aae826a05c3fffd", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0382_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0382_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0382_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0382_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0382_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0382_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0382_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 41.2206, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 3.8576, + "max": 5.2669, + "mean": 4.8718, + "median": 4.9325, + "p90": 5.123 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 117275, + "min": 0.0, + "max": 63.8754, + "mean": 16.2837, + "median": 9.2278, + "p90": 41.3148 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 111, + "schools_waterpoints": 6, + "urban_landuse": 6576, + "water_surface": 10, + "waterways": 1 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0383_uncertain_sparse_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0383_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..9054715eb8ab4ba2669d350c52720200bb6690f4 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0383_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0383_uncertain_sparse_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.198363662737556, + "lat": -0.6409144719880584 + }, + "bbox": [ + 34.17587921588606, + -0.6633975121360267, + 34.22084810958905, + -0.6184314318400901 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0383_uncertain_sparse_context_packet.png", + "sha256": "c3f02c4aae4801f12a684b1e81a3a4ea5c725fbda16b13f6e5f2690b66924965", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0383_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0383_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0383_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0383_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0383_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0383_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0383_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 54.0871, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 6.5936, + "max": 7.0283, + "mean": 6.8249, + "median": 6.8271, + "p90": 6.9468 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 143986, + "min": 0.0003, + "max": 9.0597, + "mean": 1.4021, + "median": 1.1622, + "p90": 3.1559 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 9, + "schools_waterpoints": 0, + "urban_landuse": 1352, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0388_uncertain_sparse_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0388_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..504a6ad156f0942615676504ea481dc8a10b2223 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0388_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0388_uncertain_sparse_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.31707259073531, + "lat": -0.4860522483981766 + }, + "bbox": [ + 34.29458874156836, + -0.5085352885461449, + 34.33955643990225, + -0.46356920825020836 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0388_uncertain_sparse_context_packet.png", + "sha256": "9910036b36ab957b4998688d4caed89cbb5bf51a3f784c47d87e8722c0a106ad", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0388_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0388_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0388_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0388_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0388_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0388_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0388_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 47.2805, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.5829, + "max": 4.7028, + "mean": 2.7301, + "median": 2.6078, + "p90": 4.4439 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 204105, + "min": 0.0, + "max": 33.1842, + "mean": 4.137, + "median": 2.507, + "p90": 9.8182 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 52, + "schools_waterpoints": 4, + "urban_landuse": 3849, + "water_surface": 0, + "waterways": 6 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0389_uncertain_sparse_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0389_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..9b27ee078f59a8799d1cc3cd28dabecd676f4067 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0389_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0389_uncertain_sparse_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.18147842160046, + "lat": -0.35028750974035494 + }, + "bbox": [ + 34.15899496127204, + -0.3727705498883232, + 34.203961881928876, + -0.3278044695923867 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0389_uncertain_sparse_context_packet.png", + "sha256": "579df8a3fb658d9614aec318338ca759815b767adb14caf2db7ee257d0c2fffa", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0389_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0389_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0389_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0389_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0389_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0389_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0389_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 34.1919, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 2.6374, + "mean": 0.4506, + "median": 0.1982, + "p90": 1.35 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 11876, + "min": 0.0, + "max": 7.8851, + "mean": 1.6755, + "median": 1.0051, + "p90": 4.9627 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 0, + "schools_waterpoints": 0, + "urban_landuse": 264, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0390_uncertain_sparse_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0390_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..0d5370e2b6d0362efad192da05a8f3a9eeac3a8d --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0390_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0390_uncertain_sparse_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.29512496413904, + "lat": -0.5428332311954811 + }, + "bbox": [ + 34.27264091490347, + -0.5653162713434494, + 34.317609013374614, + -0.5203501910475128 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0390_uncertain_sparse_context_packet.png", + "sha256": "c94c699c6ba8eaaabd4d90bbed26b52b0f5fe758c10771f6fa7a7d515589ff91", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0390_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0390_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0390_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0390_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0390_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0390_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0390_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 45.7495, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0, + "max": 4.3293, + "mean": 1.8146, + "median": 1.7786, + "p90": 3.5725 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 257132, + "min": 0.0001, + "max": 13.3454, + "mean": 2.4567, + "median": 2.2197, + "p90": 4.356 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 82, + "schools_waterpoints": 0, + "urban_landuse": 3463, + "water_surface": 0, + "waterways": 2 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0391_uncertain_sparse_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0391_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..e0eef7fdf01cf8a01a69d2babcaab6556b00466a --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0391_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0391_uncertain_sparse_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.377425183257515, + "lat": -0.4685930714419556 + }, + "bbox": [ + 34.35494139116882, + -0.49107611158992387, + 34.39990897534621, + -0.44611003129398735 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0391_uncertain_sparse_context_packet.png", + "sha256": "d2352deb1e2cac232b696662eee23bb4fe52efc014c63cffa4256b6ded6a9dc9", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0391_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0391_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0391_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0391_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0391_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0391_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0391_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 43.5779, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 1.6988, + "max": 4.9726, + "mean": 3.9681, + "median": 4.1044, + "p90": 4.8536 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 155471, + "min": 0.0, + "max": 10.4059, + "mean": 2.4185, + "median": 2.1796, + "p90": 4.5037 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 5, + "schools_waterpoints": 1, + "urban_landuse": 2440, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0392_uncertain_sparse_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0392_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..03b8f9107fdca29151d35d83fc2a8db4325d7430 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0392_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0392_uncertain_sparse_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.20759257188373, + "lat": -0.41013172196948 + }, + "bbox": [ + 34.185108955718135, + -0.43261476211744826, + 34.230076188049324, + -0.38764868182151174 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0392_uncertain_sparse_context_packet.png", + "sha256": "a6b50a09f063ba285949f90fc3147eb01b26cf841eaf45cb1a746f10aae98623", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0392_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0392_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0392_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0392_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0392_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0392_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0392_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 47.4813, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 1.9668, + "max": 4.9672, + "mean": 4.2503, + "median": 4.4966, + "p90": 4.7929 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 116155, + "min": 0.0, + "max": 58.4624, + "mean": 10.6734, + "median": 5.7042, + "p90": 33.0556 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 3, + "major_roads": 99, + "schools_waterpoints": 6, + "urban_landuse": 5819, + "water_surface": 4, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 27, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0393_uncertain_sparse_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0393_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..48e4084f8ee900185fa8aed927cbb68c2d586fd3 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0393_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0393_uncertain_sparse_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.36268900546542, + "lat": -0.5884824526817056 + }, + "bbox": [ + 34.34020477936876, + -0.6109654928296739, + 34.38517323156208, + -0.5659994125337373 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0393_uncertain_sparse_context_packet.png", + "sha256": "637248498956a1c724a374b44d1870934fb16d740af619ca9927e2fe04a5423a", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0393_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0393_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0393_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0393_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0393_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0393_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0393_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 46.2353, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 5.023, + "max": 9.7834, + "mean": 8.1652, + "median": 8.252, + "p90": 9.365 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 253505, + "min": 0.0002, + "max": 22.546, + "mean": 2.7068, + "median": 2.3732, + "p90": 5.0015 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 38, + "schools_waterpoints": 3, + "urban_landuse": 3965, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0394_uncertain_sparse_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0394_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..70cf684255bd85d13197a9ba16b3e431d02b619f --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0394_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0394_uncertain_sparse_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.38582184719256, + "lat": -0.5295373347100165 + }, + "bbox": [ + 34.363337846785555, + -0.5520203748579848, + 34.408305847599564, + -0.5070542945620482 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0394_uncertain_sparse_context_packet.png", + "sha256": "45ec59ed36cd436cecfddd805248fa4b877c4d2c7007f4b5f021fc714fb20c4b", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0394_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0394_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0394_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0394_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0394_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0394_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0394_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 49.9968, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.0023, + "max": 5.278, + "mean": 1.7967, + "median": 1.2716, + "p90": 4.2394 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 243017, + "min": 0.0002, + "max": 32.0159, + "mean": 2.927, + "median": 2.2963, + "p90": 5.5374 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 6, + "schools_waterpoints": 0, + "urban_landuse": 3269, + "water_surface": 0, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0395_uncertain_sparse_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0395_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..001c04750d30e1c11a2fa2c99eadae8e3d4e8f86 --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0395_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0395_uncertain_sparse_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.318355431581715, + "lat": -0.4777461218632645 + }, + "bbox": [ + 34.29587160982988, + -0.5002291620112328, + 34.34083925333355, + -0.4552630817152962 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0395_uncertain_sparse_context_packet.png", + "sha256": "3e77c7854225b7482ccbed2b4624f081336befcecc729784073c9317c625d3a1", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0395_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0395_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0395_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0395_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0395_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0395_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0395_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 45.2411, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.9335, + "max": 4.7558, + "mean": 3.2524, + "median": 3.2348, + "p90": 4.6365 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 170223, + "min": 0.0, + "max": 32.8119, + "mean": 3.1515, + "median": 2.1176, + "p90": 6.4177 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 45, + "schools_waterpoints": 2, + "urban_landuse": 2947, + "water_surface": 0, + "waterways": 3 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0396_uncertain_sparse_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0396_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..60bc1be0c7cbb685f1e6829d1dd3b70e0ece65cb --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0396_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0396_uncertain_sparse_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.41073875794425, + "lat": -0.5986054884619532 + }, + "bbox": [ + 34.38825449069357, + -0.6210885286099215, + 34.433223025194934, + -0.5761224483139848 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0396_uncertain_sparse_context_packet.png", + "sha256": "45c024273bd4e98295cbba09f885b9a586261370c5caa7ce296cb57237b0c06c", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0396_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0396_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0396_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0396_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0396_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0396_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0396_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 46.8222, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 8.8553, + "max": 9.8177, + "mean": 9.3125, + "median": 9.2936, + "p90": 9.5463 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 258657, + "min": 0.0002, + "max": 28.2851, + "mean": 3.4086, + "median": 2.8107, + "p90": 6.3967 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 48, + "schools_waterpoints": 1, + "urban_landuse": 3995, + "water_surface": 0, + "waterways": 4 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0397_uncertain_sparse_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0397_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..ec39fc9070e499bf35c1d800da0baaee4039f5ba --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0397_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0397_uncertain_sparse_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.42059255556004, + "lat": -0.5965703064082678 + }, + "bbox": [ + 34.398108296639535, + -0.6190533465562361, + 34.44307681448055, + -0.5740872662602995 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0397_uncertain_sparse_context_packet.png", + "sha256": "876aeb335856480a25ff8373e88b8c925d309bfa8281a511fec2354fe7cb4c89", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0397_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0397_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0397_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0397_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0397_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0397_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0397_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 45.8067, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 8.7639, + "max": 9.7794, + "mean": 9.3114, + "median": 9.2951, + "p90": 9.5749 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 244307, + "min": 0.0002, + "max": 23.9606, + "mean": 3.0075, + "median": 2.6587, + "p90": 5.5155 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 38, + "schools_waterpoints": 1, + "urban_landuse": 3810, + "water_surface": 0, + "waterways": 1 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 0, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "hard_or_ecological_negative", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +} diff --git a/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0400_uncertain_sparse_context_sidecar.json b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0400_uncertain_sparse_context_sidecar.json new file mode 100644 index 0000000000000000000000000000000000000000..cd5c2216088998ac72adf2705a3cc5b46602ab4f --- /dev/null +++ b/sidecars/mbita_schistosomiasis/mbita_schistosomiasis_s0400_uncertain_sparse_context_sidecar.json @@ -0,0 +1,149 @@ +{ + "schema_version": "vectoros-chip-sidecar-v0.2", + "packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1", + "run_id": "vectoros_vector_100k_simsat_20260506", + "chip_id": "mbita_schistosomiasis_s0400_uncertain_sparse_context", + "aoi_id": "mbita_schistosomiasis", + "split": "train", + "disease_module": "schistosomiasis", + "primary_disease": "schistosomiasis", + "country": "Kenya", + "name": "Mbita/Homa Bay lakeshore, Kenya", + "timestamp": "2025-12-31T12:00:00Z", + "chip_size_km": 5.0, + "pixels": 512, + "center": { + "lon": 34.17417863868306, + "lat": -0.4009459924499703 + }, + "bbox": [ + 34.1516950480312, + -0.42342903259793857, + 34.19666222933492, + -0.37846295230200205 + ], + "panel_order": [ + "top_left: SimSat Sentinel-2 true-color RGB", + "top_right: SimSat Sentinel-2 false color NIR-red-green", + "bottom_left: Mapbox satellite context", + "bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels" + ], + "image_packet": { + "path": "image_packets/mbita_schistosomiasis/mbita_schistosomiasis_s0400_uncertain_sparse_context_packet.png", + "sha256": "1e48e9514e415eb2d5b30e28979fc0ec90f9013ba989d79e36b040e1bec2de19", + "width": 1024, + "height": 1024 + }, + "source_assets": { + "packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "simsat_raw_dir": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0400_uncertain_sparse_context", + "sentinel_rgb": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0400_uncertain_sparse_context/sentinel_rgb.png", + "sentinel_false_color": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0400_uncertain_sparse_context/sentinel_false_color_nir_red_green.png", + "sentinel_bands": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0400_uncertain_sparse_context/sentinel_bands_red_green_blue_nir.npz", + "sentinel_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0400_uncertain_sparse_context/sentinel_metadata.json", + "mapbox_satellite": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0400_uncertain_sparse_context/mapbox_satellite.png", + "mapbox_metadata": "simsat_raw/mbita_schistosomiasis/mbita_schistosomiasis_s0400_uncertain_sparse_context/mapbox_metadata.json", + "source_layers": { + "rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz", + "land_cover_worldcover": "data/raw/esa_worldcover/mbita_kenya/mbita_worldcover_2021_v200_map.tif", + "population_worldpop": "data/raw/worldpop/mbita_kenya/mbita_worldpop_2025_constrained_100m.tif", + "jrc_gsw": { + "occurrence": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_occurrence_v1_4_2021.tif", + "seasonality": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_seasonality_v1_4_2021.tif", + "transitions": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_transitions_v1_4_2021.tif", + "extent": "data/raw/jrc_gsw/mbita_kenya/mbita_gsw_extent_v1_4_2021.tif" + }, + "osm": { + "health_facilities": "data/raw/osm/mbita_kenya/osm_health_facilities_mbita.overpass.json", + "major_roads": "data/raw/osm/mbita_kenya/osm_major_roads_mbita.overpass.json", + "schools_waterpoints": "data/raw/osm/mbita_kenya/osm_schools_waterpoints_mbita.overpass.json", + "urban_landuse": "data/raw/osm/mbita_kenya/osm_urban_landuse_mbita.overpass.json", + "water_surface": "data/raw/osm/mbita_kenya/osm_water_surface_mbita.overpass.json", + "waterways": "data/raw/osm/mbita_kenya/osm_waterways_mbita.overpass.json" + }, + "labels": { + "gbif_intermediate_host": [ + "data/raw/map_gbif/mbita_kenya/gbif_freshwater_snails_mbita_occurrences.csv" + ] + } + }, + "aoi_manifest": "data/manifests/mbita_schistosomiasis_manifest.md", + "simsat_provider_repo": "SimSat" + }, + "quality": { + "evidence_packet_available": true, + "sentinel_available": true, + "mapbox_available": true, + "sentinel_cloud_cover_percent": 1.40536, + "sentinel_datetime": "2025-09-09T08:10:26Z", + "sentinel_source": "sentinel-2a", + "mapbox_target_visible": true, + "source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet", + "sampling_strategy": "uncertain_sparse_context", + "packet_std": 55.1986, + "repair_attempts": 0 + }, + "numeric_features": { + "raster_stats": { + "rainfall_chirps": { + "valid_pixels": 262144, + "min": 0.3475, + "max": 4.7958, + "mean": 2.7958, + "median": 2.8542, + "p90": 4.3954 + }, + "land_cover_worldcover": { + "valid_pixels": 0 + }, + "population_worldpop": { + "valid_pixels": 200005, + "min": 0.0, + "max": 37.3315, + "mean": 6.167, + "median": 3.7804, + "p90": 16.0594 + }, + "jrc_gsw_occurrence": { + "valid_pixels": 0 + }, + "jrc_gsw_seasonality": { + "valid_pixels": 0 + }, + "jrc_gsw_transitions": { + "valid_pixels": 0 + }, + "jrc_gsw_extent": { + "valid_pixels": 0 + } + }, + "osm_counts": { + "health_facilities": 0, + "major_roads": 107, + "schools_waterpoints": 4, + "urban_landuse": 5793, + "water_surface": 8, + "waterways": 0 + }, + "label_counts": { + "vector_label": 0, + "disease_label": 0, + "intermediate_host_label": 2, + "disease_aggregate": 0 + } + }, + "label_quality": { + "tier": "weak_label_positive", + "description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability." + }, + "license_flags": { + "mapbox_redistribution": "user_verified_for_project_use", + "sentinel_2": "copernicus_sentinel_open_data", + "open_data_layers": "source_specific_open_terms_apply", + "weak_labels": "presence_and_survey_biased" + }, + "sampling": { + "sample_type": "uncertain_sparse_context", + "sampler_version": "stratified-v0.1" + } +}