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Browse filesThis view is limited to 50 files because it contains too many changes. See raw diff
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0002_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0003_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0004_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0005_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0008_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0009_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0010_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0011_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0012_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0016_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0017_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0019_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0020_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0021_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0024_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0026_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0027_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0032_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0033_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0034_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0035_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0036_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0038_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0039_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0040_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0041_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0045_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0046_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0047_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0052_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0053_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0054_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0055_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0057_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0058_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0059_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0061_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0062_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0063_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0064_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0065_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0068_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0069_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0070_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0071_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0073_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0076_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0077_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0078_label_positive_jitter_sidecar.json +149 -0
- sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0080_label_positive_jitter_sidecar.json +149 -0
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0002_label_positive_jitter_sidecar.json
ADDED
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@@ -0,0 +1,149 @@
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| 1 |
+
{
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| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
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| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
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| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
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| 5 |
+
"chip_id": "mwanza_schistosomiasis_s0002_label_positive_jitter",
|
| 6 |
+
"aoi_id": "mwanza_schistosomiasis",
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| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Tanzania",
|
| 11 |
+
"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 32.7417260022616,
|
| 17 |
+
"lat": -2.523898703444777
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
32.71922113105054,
|
| 21 |
+
-2.5463817435927454,
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| 22 |
+
32.76423087347266,
|
| 23 |
+
-2.5014156632968088
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0002_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "2b106cfb7859d3193b44be60d5a6c82c36ad4d656fc94f42decb9233705986b2",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0002_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0002_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0002_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0002_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0002_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0002_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0002_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/mwanza_tanzania/mwanza_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/mwanza_tanzania/mwanza_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/mwanza_tanzania/osm_major_roads_mwanza.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/mwanza_tanzania/gbif_freshwater_snails_mwanza_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 4.524451,
|
| 78 |
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"sentinel_datetime": "2025-09-10T08:20:59Z",
|
| 79 |
+
"sentinel_source": "sentinel-2c",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 53.1924,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
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"min": 0.0,
|
| 91 |
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"max": 0.0,
|
| 92 |
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"mean": 0.0,
|
| 93 |
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"median": 0.0,
|
| 94 |
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"p90": 0.0
|
| 95 |
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},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 62662,
|
| 101 |
+
"min": 0.0348,
|
| 102 |
+
"max": 14.6628,
|
| 103 |
+
"mean": 3.9264,
|
| 104 |
+
"median": 3.1027,
|
| 105 |
+
"p90": 8.8049
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 0,
|
| 122 |
+
"major_roads": 0,
|
| 123 |
+
"schools_waterpoints": 1,
|
| 124 |
+
"urban_landuse": 626,
|
| 125 |
+
"water_surface": 2,
|
| 126 |
+
"waterways": 0
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 48,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
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sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0003_label_positive_jitter_sidecar.json
ADDED
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|
|
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|
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|
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|
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|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "mwanza_schistosomiasis_s0003_label_positive_jitter",
|
| 6 |
+
"aoi_id": "mwanza_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Tanzania",
|
| 11 |
+
"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 32.83738400858451,
|
| 17 |
+
"lat": -2.5146605755604656
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
32.81487929702387,
|
| 21 |
+
-2.537143615708434,
|
| 22 |
+
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|
| 23 |
+
-2.4921775354124973
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0003_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "d52251aad830ebfdb07939252ed64e8a3151009076b602366f5a0b2d9d342360",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0003_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0003_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0003_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0003_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0003_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0003_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0003_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/mwanza_tanzania/mwanza_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/mwanza_tanzania/mwanza_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/mwanza_tanzania/osm_major_roads_mwanza.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/mwanza_tanzania/gbif_freshwater_snails_mwanza_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 4.524451,
|
| 78 |
+
"sentinel_datetime": "2025-09-10T08:20:59Z",
|
| 79 |
+
"sentinel_source": "sentinel-2c",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 44.767,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 0.0,
|
| 91 |
+
"max": 0.0,
|
| 92 |
+
"mean": 0.0,
|
| 93 |
+
"median": 0.0,
|
| 94 |
+
"p90": 0.0
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 98930,
|
| 101 |
+
"min": 0.0817,
|
| 102 |
+
"max": 22.2432,
|
| 103 |
+
"mean": 5.5644,
|
| 104 |
+
"median": 4.0539,
|
| 105 |
+
"p90": 13.2657
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 0,
|
| 122 |
+
"major_roads": 1,
|
| 123 |
+
"schools_waterpoints": 1,
|
| 124 |
+
"urban_landuse": 1774,
|
| 125 |
+
"water_surface": 0,
|
| 126 |
+
"waterways": 0
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 31,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0004_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "mwanza_schistosomiasis_s0004_label_positive_jitter",
|
| 6 |
+
"aoi_id": "mwanza_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Tanzania",
|
| 11 |
+
"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 32.81727520450073,
|
| 17 |
+
"lat": -2.6713584850016465
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
32.79476770541163,
|
| 21 |
+
-2.693841525149615,
|
| 22 |
+
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|
| 23 |
+
-2.648875444853678
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0004_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "7b95ea6f8532dce7208790edbc6dc429d5469ce14e99849386c338336a1e15bb",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0004_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0004_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0004_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0004_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0004_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0004_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0004_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/mwanza_tanzania/mwanza_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/mwanza_tanzania/mwanza_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/mwanza_tanzania/osm_major_roads_mwanza.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/mwanza_tanzania/gbif_freshwater_snails_mwanza_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 4.524451,
|
| 78 |
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"sentinel_datetime": "2025-09-10T08:20:59Z",
|
| 79 |
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"sentinel_source": "sentinel-2c",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 56.9976,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
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"min": 0.0,
|
| 91 |
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"max": 0.0,
|
| 92 |
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"mean": 0.0,
|
| 93 |
+
"median": 0.0,
|
| 94 |
+
"p90": 0.0
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
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"valid_pixels": 96104,
|
| 101 |
+
"min": 0.027,
|
| 102 |
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"max": 15.6258,
|
| 103 |
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"mean": 3.1453,
|
| 104 |
+
"median": 2.5456,
|
| 105 |
+
"p90": 6.6624
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 0,
|
| 122 |
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"major_roads": 1,
|
| 123 |
+
"schools_waterpoints": 0,
|
| 124 |
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"urban_landuse": 725,
|
| 125 |
+
"water_surface": 0,
|
| 126 |
+
"waterways": 0
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 83,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0005_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "mwanza_schistosomiasis_s0005_label_positive_jitter",
|
| 6 |
+
"aoi_id": "mwanza_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Tanzania",
|
| 11 |
+
"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 32.753135280954105,
|
| 17 |
+
"lat": -2.53054674220884
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
-2.5080637020608716
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0005_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "fb53f7840386f5a241506252e291f4d69d24dfb294f289983fadb6120137d16c",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0005_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0005_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0005_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0005_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0005_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0005_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0005_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/mwanza_tanzania/mwanza_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/mwanza_tanzania/mwanza_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/mwanza_tanzania/osm_major_roads_mwanza.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/mwanza_tanzania/gbif_freshwater_snails_mwanza_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 4.524451,
|
| 78 |
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"sentinel_datetime": "2025-09-10T08:20:59Z",
|
| 79 |
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"sentinel_source": "sentinel-2c",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 56.3985,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
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},
|
| 86 |
+
"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": 0.0,
|
| 91 |
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"max": 0.0,
|
| 92 |
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"mean": 0.0,
|
| 93 |
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"median": 0.0,
|
| 94 |
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"p90": 0.0
|
| 95 |
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},
|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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"valid_pixels": 0
|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 127186,
|
| 101 |
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"min": 0.0342,
|
| 102 |
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"max": 15.3518,
|
| 103 |
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"mean": 2.9882,
|
| 104 |
+
"median": 2.0252,
|
| 105 |
+
"p90": 7.4065
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 0,
|
| 122 |
+
"major_roads": 2,
|
| 123 |
+
"schools_waterpoints": 1,
|
| 124 |
+
"urban_landuse": 780,
|
| 125 |
+
"water_surface": 4,
|
| 126 |
+
"waterways": 0
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 48,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0008_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
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|
|
|
|
|
|
|
|
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|
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|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "mwanza_schistosomiasis_s0008_label_positive_jitter",
|
| 6 |
+
"aoi_id": "mwanza_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Tanzania",
|
| 11 |
+
"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 32.74538826070447,
|
| 17 |
+
"lat": -2.5198715794798074
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
-2.497388539331839
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0008_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "4296f14fa171b12e653d57d961729dbdd80ea215e53f5113f6c7517e62bc93a8",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0008_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0008_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0008_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0008_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0008_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0008_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0008_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/mwanza_tanzania/mwanza_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/mwanza_tanzania/mwanza_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/mwanza_tanzania/osm_major_roads_mwanza.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/mwanza_tanzania/gbif_freshwater_snails_mwanza_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 4.524451,
|
| 78 |
+
"sentinel_datetime": "2025-09-10T08:20:59Z",
|
| 79 |
+
"sentinel_source": "sentinel-2c",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 53.448,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 0.0,
|
| 91 |
+
"max": 0.0,
|
| 92 |
+
"mean": 0.0,
|
| 93 |
+
"median": 0.0,
|
| 94 |
+
"p90": 0.0
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 65812,
|
| 101 |
+
"min": 0.0342,
|
| 102 |
+
"max": 14.4347,
|
| 103 |
+
"mean": 3.5479,
|
| 104 |
+
"median": 2.4825,
|
| 105 |
+
"p90": 8.4941
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 0,
|
| 122 |
+
"major_roads": 1,
|
| 123 |
+
"schools_waterpoints": 1,
|
| 124 |
+
"urban_landuse": 567,
|
| 125 |
+
"water_surface": 2,
|
| 126 |
+
"waterways": 0
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 48,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0009_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "mwanza_schistosomiasis_s0009_label_positive_jitter",
|
| 6 |
+
"aoi_id": "mwanza_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Tanzania",
|
| 11 |
+
"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 32.82183221651565,
|
| 17 |
+
"lat": -2.673776512346158
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
-2.6962595524941264,
|
| 22 |
+
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|
| 23 |
+
-2.65129347219819
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0009_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "d5271f25326875c01e7806722c79f1fee198a75bdb1e6fc99604bbb5daa3cb9b",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0009_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0009_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0009_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0009_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0009_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0009_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0009_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/mwanza_tanzania/mwanza_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/mwanza_tanzania/mwanza_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/mwanza_tanzania/osm_major_roads_mwanza.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/mwanza_tanzania/gbif_freshwater_snails_mwanza_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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|
| 78 |
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"sentinel_datetime": "2025-09-10T08:20:59Z",
|
| 79 |
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"sentinel_source": "sentinel-2c",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 57.2516,
|
| 84 |
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|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": 0.0,
|
| 91 |
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"max": 0.0,
|
| 92 |
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"mean": 0.0,
|
| 93 |
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"median": 0.0,
|
| 94 |
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"p90": 0.0
|
| 95 |
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},
|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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"valid_pixels": 0
|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 86391,
|
| 101 |
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"min": 0.027,
|
| 102 |
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"max": 15.6185,
|
| 103 |
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"mean": 3.2713,
|
| 104 |
+
"median": 2.8314,
|
| 105 |
+
"p90": 6.7696
|
| 106 |
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},
|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
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},
|
| 120 |
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"osm_counts": {
|
| 121 |
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"health_facilities": 0,
|
| 122 |
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"major_roads": 0,
|
| 123 |
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"schools_waterpoints": 0,
|
| 124 |
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"urban_landuse": 684,
|
| 125 |
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"water_surface": 0,
|
| 126 |
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"waterways": 0
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
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"vector_label": 0,
|
| 130 |
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"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 85,
|
| 132 |
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"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0010_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "mwanza_schistosomiasis_s0010_label_positive_jitter",
|
| 6 |
+
"aoi_id": "mwanza_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Tanzania",
|
| 11 |
+
"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 32.9538064377066,
|
| 17 |
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"lat": -2.40692405019934
|
| 18 |
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},
|
| 19 |
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"bbox": [
|
| 20 |
+
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|
| 21 |
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|
| 22 |
+
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|
| 23 |
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-2.3844410100513715
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0010_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "1bd0a08a1aeba1b6af2effbfe7c99ab066250e55e8a02058ce63b5139e957f4a",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0010_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0010_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0010_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0010_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0010_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0010_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0010_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/mwanza_tanzania/mwanza_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/mwanza_tanzania/mwanza_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/mwanza_tanzania/osm_major_roads_mwanza.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
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"data/raw/map_gbif/mwanza_tanzania/gbif_freshwater_snails_mwanza_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
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}
|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 4.524451,
|
| 78 |
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"sentinel_datetime": "2025-09-10T08:20:59Z",
|
| 79 |
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"sentinel_source": "sentinel-2c",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 56.6843,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": 0.0,
|
| 91 |
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"max": 0.0,
|
| 92 |
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"mean": 0.0,
|
| 93 |
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"median": 0.0,
|
| 94 |
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"p90": 0.0
|
| 95 |
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},
|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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"valid_pixels": 0
|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 166087,
|
| 101 |
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|
| 102 |
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|
| 103 |
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|
| 104 |
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"median": 9.5524,
|
| 105 |
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"p90": 34.8163
|
| 106 |
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},
|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
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},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
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},
|
| 120 |
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"osm_counts": {
|
| 121 |
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"health_facilities": 1,
|
| 122 |
+
"major_roads": 1,
|
| 123 |
+
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|
| 124 |
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"urban_landuse": 4820,
|
| 125 |
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"water_surface": 0,
|
| 126 |
+
"waterways": 2
|
| 127 |
+
},
|
| 128 |
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"label_counts": {
|
| 129 |
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|
| 130 |
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"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 25,
|
| 132 |
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"disease_aggregate": 0
|
| 133 |
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}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0011_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
|
|
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|
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|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "mwanza_schistosomiasis_s0011_label_positive_jitter",
|
| 6 |
+
"aoi_id": "mwanza_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Tanzania",
|
| 11 |
+
"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
+
"lon": 32.81852683884016,
|
| 17 |
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"lat": -2.6660612759170492
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
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|
| 22 |
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|
| 23 |
+
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|
| 24 |
+
],
|
| 25 |
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"panel_order": [
|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0011_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "f2105ed089022380e308b98a8202d54844276f100492deac10cc91a672959c98",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0011_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0011_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
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"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0011_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0011_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0011_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0011_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0011_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/mwanza_tanzania/mwanza_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/mwanza_tanzania/mwanza_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/mwanza_tanzania/osm_major_roads_mwanza.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/mwanza_tanzania/gbif_freshwater_snails_mwanza_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
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"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 4.524451,
|
| 78 |
+
"sentinel_datetime": "2025-09-10T08:20:59Z",
|
| 79 |
+
"sentinel_source": "sentinel-2c",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 54.3492,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": 0.0,
|
| 91 |
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"max": 0.0,
|
| 92 |
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"mean": 0.0,
|
| 93 |
+
"median": 0.0,
|
| 94 |
+
"p90": 0.0
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 99237,
|
| 101 |
+
"min": 0.027,
|
| 102 |
+
"max": 15.6361,
|
| 103 |
+
"mean": 3.1512,
|
| 104 |
+
"median": 2.6274,
|
| 105 |
+
"p90": 6.6101
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 0,
|
| 122 |
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"major_roads": 1,
|
| 123 |
+
"schools_waterpoints": 0,
|
| 124 |
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"urban_landuse": 756,
|
| 125 |
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"water_surface": 0,
|
| 126 |
+
"waterways": 0
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 83,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0012_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "mwanza_schistosomiasis_s0012_label_positive_jitter",
|
| 6 |
+
"aoi_id": "mwanza_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Tanzania",
|
| 11 |
+
"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 32.83569989197873,
|
| 17 |
+
"lat": -2.496048470509654
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
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|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0012_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "c0431eb3c582a78d8d8abcc9d8733ed9919f679294e2c72871d42190262e7ec5",
|
| 34 |
+
"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0012_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0012_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0012_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0012_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0012_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0012_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0012_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/mwanza_tanzania/mwanza_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/mwanza_tanzania/mwanza_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/mwanza_tanzania/osm_major_roads_mwanza.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/mwanza_tanzania/gbif_freshwater_snails_mwanza_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
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"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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|
| 78 |
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"sentinel_datetime": "2025-09-10T08:20:59Z",
|
| 79 |
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"sentinel_source": "sentinel-2c",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 39.1322,
|
| 84 |
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|
| 85 |
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|
| 86 |
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|
| 87 |
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|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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|
| 91 |
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"max": 0.0,
|
| 92 |
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"mean": 0.0,
|
| 93 |
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"median": 0.0,
|
| 94 |
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"p90": 0.0
|
| 95 |
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|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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|
| 98 |
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|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 58726,
|
| 101 |
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"min": 0.0421,
|
| 102 |
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"max": 16.2738,
|
| 103 |
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"mean": 3.3067,
|
| 104 |
+
"median": 2.0962,
|
| 105 |
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"p90": 8.2123
|
| 106 |
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},
|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
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"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
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|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
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}
|
| 119 |
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},
|
| 120 |
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"osm_counts": {
|
| 121 |
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"health_facilities": 0,
|
| 122 |
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"major_roads": 0,
|
| 123 |
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"schools_waterpoints": 0,
|
| 124 |
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"urban_landuse": 539,
|
| 125 |
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"water_surface": 0,
|
| 126 |
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"waterways": 0
|
| 127 |
+
},
|
| 128 |
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"label_counts": {
|
| 129 |
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"vector_label": 0,
|
| 130 |
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"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 31,
|
| 132 |
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"disease_aggregate": 0
|
| 133 |
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}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0016_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "mwanza_schistosomiasis_s0016_label_positive_jitter",
|
| 6 |
+
"aoi_id": "mwanza_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Tanzania",
|
| 11 |
+
"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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|
| 17 |
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"lat": -2.6807967209527725
|
| 18 |
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},
|
| 19 |
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"bbox": [
|
| 20 |
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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],
|
| 25 |
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"panel_order": [
|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0016_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "dbbd347b6ef95b237f4e3f16e458968638e01d721af1bcd82deb277bc17b2a2e",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0016_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0016_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0016_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0016_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0016_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0016_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0016_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
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"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/mwanza_tanzania/mwanza_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/mwanza_tanzania/mwanza_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/mwanza_tanzania/osm_major_roads_mwanza.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
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|
| 67 |
+
]
|
| 68 |
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}
|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 4.524451,
|
| 78 |
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"sentinel_datetime": "2025-09-10T08:20:59Z",
|
| 79 |
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"sentinel_source": "sentinel-2c",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 60.4764,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": 0.0,
|
| 91 |
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"max": 0.0,
|
| 92 |
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|
| 93 |
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"median": 0.0,
|
| 94 |
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"p90": 0.0
|
| 95 |
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|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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|
| 101 |
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|
| 102 |
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|
| 103 |
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|
| 104 |
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"median": 2.1995,
|
| 105 |
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"p90": 6.4758
|
| 106 |
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},
|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
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},
|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
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"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
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},
|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
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}
|
| 119 |
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},
|
| 120 |
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"osm_counts": {
|
| 121 |
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|
| 122 |
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|
| 123 |
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|
| 124 |
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|
| 125 |
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|
| 126 |
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"waterways": 0
|
| 127 |
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},
|
| 128 |
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|
| 129 |
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|
| 130 |
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|
| 131 |
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|
| 132 |
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"disease_aggregate": 0
|
| 133 |
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}
|
| 134 |
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},
|
| 135 |
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"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0017_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
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|
|
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|
|
|
|
|
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|
|
|
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|
|
|
|
|
|
|
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|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "mwanza_schistosomiasis_s0017_label_positive_jitter",
|
| 6 |
+
"aoi_id": "mwanza_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Tanzania",
|
| 11 |
+
"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 32.830224319629,
|
| 17 |
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"lat": -2.4953101291780766
|
| 18 |
+
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|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
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|
| 23 |
+
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|
| 24 |
+
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|
| 25 |
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"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
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|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0017_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "402bbc9a159c5f7fcd4152d9f1c9132c8ff67ab73343b56df30579f4bb8817d2",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0017_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0017_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
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"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0017_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0017_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0017_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0017_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0017_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/mwanza_tanzania/mwanza_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/mwanza_tanzania/mwanza_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/mwanza_tanzania/osm_major_roads_mwanza.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/mwanza_tanzania/gbif_freshwater_snails_mwanza_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
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"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 4.524451,
|
| 78 |
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"sentinel_datetime": "2025-09-10T08:20:59Z",
|
| 79 |
+
"sentinel_source": "sentinel-2c",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 43.2639,
|
| 84 |
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|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
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"min": 0.0,
|
| 91 |
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"max": 0.0,
|
| 92 |
+
"mean": 0.0,
|
| 93 |
+
"median": 0.0,
|
| 94 |
+
"p90": 0.0
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 76859,
|
| 101 |
+
"min": 0.0421,
|
| 102 |
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"max": 15.9211,
|
| 103 |
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"mean": 3.5538,
|
| 104 |
+
"median": 2.4647,
|
| 105 |
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"p90": 8.363
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 0,
|
| 122 |
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"major_roads": 0,
|
| 123 |
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"schools_waterpoints": 0,
|
| 124 |
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"urban_landuse": 686,
|
| 125 |
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"water_surface": 0,
|
| 126 |
+
"waterways": 0
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 31,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
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},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0019_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "mwanza_schistosomiasis_s0019_label_positive_jitter",
|
| 6 |
+
"aoi_id": "mwanza_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Tanzania",
|
| 11 |
+
"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 32.90192466723692,
|
| 17 |
+
"lat": -2.5795744397732316
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
-2.5570913996252633
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
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"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0019_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "3bb3106dfae14088cd29329110c443d61406a8ddf4a0f241aa30976aba03f2f1",
|
| 34 |
+
"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0019_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0019_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0019_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0019_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0019_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0019_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0019_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/mwanza_tanzania/mwanza_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/mwanza_tanzania/mwanza_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/mwanza_tanzania/osm_major_roads_mwanza.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/mwanza_tanzania/gbif_freshwater_snails_mwanza_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 4.524451,
|
| 78 |
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"sentinel_datetime": "2025-09-10T08:20:59Z",
|
| 79 |
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"sentinel_source": "sentinel-2c",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 50.645,
|
| 84 |
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|
| 85 |
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|
| 86 |
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"numeric_features": {
|
| 87 |
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|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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|
| 90 |
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|
| 91 |
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|
| 92 |
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|
| 93 |
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"median": 0.0,
|
| 94 |
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"p90": 0.0
|
| 95 |
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|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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"valid_pixels": 0
|
| 98 |
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|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 195516,
|
| 101 |
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"min": 0.0727,
|
| 102 |
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"max": 67.0228,
|
| 103 |
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"mean": 31.2923,
|
| 104 |
+
"median": 32.4016,
|
| 105 |
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"p90": 57.9028
|
| 106 |
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|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
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"valid_pixels": 0
|
| 109 |
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},
|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
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"valid_pixels": 0
|
| 112 |
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},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
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},
|
| 120 |
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"osm_counts": {
|
| 121 |
+
"health_facilities": 21,
|
| 122 |
+
"major_roads": 13,
|
| 123 |
+
"schools_waterpoints": 23,
|
| 124 |
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"urban_landuse": 16589,
|
| 125 |
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"water_surface": 0,
|
| 126 |
+
"waterways": 3
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
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"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 48,
|
| 132 |
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"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0020_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "mwanza_schistosomiasis_s0020_label_positive_jitter",
|
| 6 |
+
"aoi_id": "mwanza_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Tanzania",
|
| 11 |
+
"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 32.75417995066573,
|
| 17 |
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"lat": -2.5363648286815637
|
| 18 |
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},
|
| 19 |
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"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
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|
| 23 |
+
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|
| 24 |
+
],
|
| 25 |
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"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0020_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "51180a0f24023be3e68c78940fb014a028bc2ff60404e78b13e39ba34eb11adf",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0020_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0020_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0020_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0020_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0020_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0020_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0020_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/mwanza_tanzania/mwanza_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/mwanza_tanzania/mwanza_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/mwanza_tanzania/osm_major_roads_mwanza.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
+
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|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 4.524451,
|
| 78 |
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"sentinel_datetime": "2025-09-10T08:20:59Z",
|
| 79 |
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"sentinel_source": "sentinel-2c",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 56.0235,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": 0.0,
|
| 91 |
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"max": 0.0,
|
| 92 |
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"mean": 0.0,
|
| 93 |
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"median": 0.0,
|
| 94 |
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"p90": 0.0
|
| 95 |
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},
|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 138589,
|
| 101 |
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|
| 102 |
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|
| 103 |
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|
| 104 |
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"median": 1.9603,
|
| 105 |
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"p90": 6.6766
|
| 106 |
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},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
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},
|
| 120 |
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"osm_counts": {
|
| 121 |
+
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|
| 122 |
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|
| 123 |
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|
| 124 |
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|
| 125 |
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|
| 126 |
+
"waterways": 0
|
| 127 |
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},
|
| 128 |
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|
| 129 |
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|
| 130 |
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|
| 131 |
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"intermediate_host_label": 48,
|
| 132 |
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"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0021_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
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|
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|
|
|
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|
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|
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|
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|
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|
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|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
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|
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|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "mwanza_schistosomiasis_s0021_label_positive_jitter",
|
| 6 |
+
"aoi_id": "mwanza_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Tanzania",
|
| 11 |
+
"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 32.82939063810485,
|
| 17 |
+
"lat": -2.658061971202285
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
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|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0021_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "e12016298058ce53ca045a6604c407cad9e32444052f541854c9853480681fad",
|
| 34 |
+
"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0021_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0021_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0021_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0021_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0021_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0021_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0021_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/mwanza_tanzania/mwanza_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/mwanza_tanzania/mwanza_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/mwanza_tanzania/osm_major_roads_mwanza.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/mwanza_tanzania/gbif_freshwater_snails_mwanza_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 4.524451,
|
| 78 |
+
"sentinel_datetime": "2025-09-10T08:20:59Z",
|
| 79 |
+
"sentinel_source": "sentinel-2c",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 46.503,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 0.0,
|
| 91 |
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"max": 0.0,
|
| 92 |
+
"mean": 0.0,
|
| 93 |
+
"median": 0.0,
|
| 94 |
+
"p90": 0.0
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 76782,
|
| 101 |
+
"min": 0.027,
|
| 102 |
+
"max": 15.6173,
|
| 103 |
+
"mean": 2.9071,
|
| 104 |
+
"median": 2.3758,
|
| 105 |
+
"p90": 5.8937
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 0,
|
| 122 |
+
"major_roads": 0,
|
| 123 |
+
"schools_waterpoints": 0,
|
| 124 |
+
"urban_landuse": 462,
|
| 125 |
+
"water_surface": 0,
|
| 126 |
+
"waterways": 0
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 85,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0024_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "mwanza_schistosomiasis_s0024_label_positive_jitter",
|
| 6 |
+
"aoi_id": "mwanza_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Tanzania",
|
| 11 |
+
"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 32.82705655036649,
|
| 17 |
+
"lat": -2.4991541325652427
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
-2.4766710924172743
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0024_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "f4e1e8786f15b0af090e4922e8b263763f4a344e5e2d95926103c707724917e7",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0024_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0024_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0024_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0024_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0024_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0024_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0024_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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|
| 49 |
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|
| 50 |
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|
| 51 |
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|
| 52 |
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|
| 53 |
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|
| 54 |
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|
| 55 |
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|
| 56 |
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|
| 57 |
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|
| 58 |
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|
| 59 |
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|
| 60 |
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"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
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|
| 63 |
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|
| 64 |
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"labels": {
|
| 65 |
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|
| 66 |
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|
| 67 |
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|
| 68 |
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|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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|
| 73 |
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|
| 74 |
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|
| 75 |
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| 76 |
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| 77 |
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|
| 79 |
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|
| 80 |
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|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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| 83 |
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|
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| 85 |
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| 86 |
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| 88 |
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| 89 |
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| 90 |
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| 91 |
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| 92 |
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| 93 |
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| 94 |
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| 95 |
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|
| 102 |
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| 103 |
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|
| 104 |
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"median": 2.6288,
|
| 105 |
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|
| 106 |
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| 108 |
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|
| 109 |
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| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
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|
| 112 |
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|
| 113 |
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"jrc_gsw_transitions": {
|
| 114 |
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"valid_pixels": 0
|
| 115 |
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|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
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|
| 118 |
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|
| 119 |
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|
| 120 |
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|
| 121 |
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|
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|
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|
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|
| 126 |
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|
| 127 |
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|
| 128 |
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|
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|
| 130 |
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|
| 131 |
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|
| 132 |
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|
| 133 |
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|
| 134 |
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|
| 135 |
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"label_quality": {
|
| 136 |
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"tier": "weak_label_positive",
|
| 137 |
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"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
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},
|
| 139 |
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"license_flags": {
|
| 140 |
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"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
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},
|
| 145 |
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"sampling": {
|
| 146 |
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"sample_type": "label_positive_jitter",
|
| 147 |
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"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0026_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
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|
|
|
|
|
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|
|
|
|
|
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|
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|
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|
|
|
|
|
|
|
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|
|
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|
|
|
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|
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|
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|
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|
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|
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|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
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|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
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|
|
|
|
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|
|
|
|
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|
|
|
|
|
|
|
|
|
|
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|
|
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|
|
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|
|
|
|
|
|
|
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|
|
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|
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|
|
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|
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|
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|
|
|
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|
|
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|
|
|
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|
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|
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|
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|
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|
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|
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|
|
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|
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|
|
|
|
|
|
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|
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|
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|
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|
|
|
|
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|
|
|
|
|
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|
|
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|
|
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|
|
|
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|
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|
|
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|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
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"chip_id": "mwanza_schistosomiasis_s0026_label_positive_jitter",
|
| 6 |
+
"aoi_id": "mwanza_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Tanzania",
|
| 11 |
+
"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
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"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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|
| 14 |
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"pixels": 512,
|
| 15 |
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|
| 16 |
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|
| 17 |
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|
| 18 |
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|
| 19 |
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|
| 20 |
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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],
|
| 25 |
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"panel_order": [
|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
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"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
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"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
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"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0026_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "862618bc95834ee2bf4f35b55367ef8781c2d26985c839cde7a4b747034b8e35",
|
| 34 |
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|
| 35 |
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|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
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"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0026_label_positive_jitter",
|
| 40 |
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"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0026_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0026_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0026_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0026_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0026_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
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"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0026_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
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"source_layers": {
|
| 47 |
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|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/mwanza_tanzania/mwanza_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/mwanza_tanzania/mwanza_worldpop_2025_constrained_100m.tif",
|
| 50 |
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"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/mwanza_tanzania/osm_major_roads_mwanza.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
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|
| 67 |
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]
|
| 68 |
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}
|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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|
| 75 |
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|
| 76 |
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|
| 77 |
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|
| 78 |
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|
| 79 |
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|
| 80 |
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|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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|
| 83 |
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|
| 84 |
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|
| 85 |
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| 86 |
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|
| 87 |
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| 88 |
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|
| 89 |
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|
| 90 |
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|
| 91 |
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|
| 92 |
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|
| 93 |
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|
| 94 |
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|
| 95 |
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|
| 96 |
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|
| 97 |
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|
| 98 |
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|
| 99 |
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|
| 100 |
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|
| 101 |
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|
| 102 |
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|
| 103 |
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|
| 104 |
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|
| 105 |
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|
| 106 |
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|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
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"valid_pixels": 0
|
| 109 |
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},
|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
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|
| 112 |
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|
| 113 |
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"jrc_gsw_transitions": {
|
| 114 |
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|
| 115 |
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|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
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|
| 118 |
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|
| 119 |
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|
| 120 |
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|
| 121 |
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|
| 122 |
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|
| 123 |
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|
| 124 |
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|
| 125 |
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|
| 126 |
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|
| 127 |
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|
| 128 |
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|
| 129 |
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|
| 130 |
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|
| 131 |
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|
| 132 |
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|
| 133 |
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|
| 134 |
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},
|
| 135 |
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"label_quality": {
|
| 136 |
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"tier": "weak_label_positive",
|
| 137 |
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"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
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},
|
| 139 |
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|
| 140 |
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|
| 141 |
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|
| 142 |
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|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
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},
|
| 145 |
+
"sampling": {
|
| 146 |
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"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0027_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
|
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|
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|
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|
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|
|
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|
|
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|
|
|
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|
|
|
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|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
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|
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|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "mwanza_schistosomiasis_s0027_label_positive_jitter",
|
| 6 |
+
"aoi_id": "mwanza_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Tanzania",
|
| 11 |
+
"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
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|
| 15 |
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|
| 16 |
+
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|
| 17 |
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|
| 18 |
+
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|
| 19 |
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|
| 20 |
+
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|
| 21 |
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|
| 22 |
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|
| 23 |
+
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|
| 24 |
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|
| 25 |
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"panel_order": [
|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
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|
| 28 |
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"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0027_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "9a939cfaba5058d659af876bb25b7d5aa2dcb76a5d3b673f3ee5afc81e1a8b31",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0027_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0027_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
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"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0027_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0027_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0027_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0027_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
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"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0027_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/mwanza_tanzania/mwanza_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/mwanza_tanzania/mwanza_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/mwanza_tanzania/osm_major_roads_mwanza.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/mwanza_tanzania/gbif_freshwater_snails_mwanza_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
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"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 4.524451,
|
| 78 |
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"sentinel_datetime": "2025-09-10T08:20:59Z",
|
| 79 |
+
"sentinel_source": "sentinel-2c",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 48.1594,
|
| 84 |
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|
| 85 |
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},
|
| 86 |
+
"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": 0.0,
|
| 91 |
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"max": 0.0,
|
| 92 |
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"mean": 0.0,
|
| 93 |
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"median": 0.0,
|
| 94 |
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"p90": 0.0
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
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"valid_pixels": 129247,
|
| 101 |
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"min": 0.0408,
|
| 102 |
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"max": 16.1687,
|
| 103 |
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"mean": 3.6158,
|
| 104 |
+
"median": 2.6871,
|
| 105 |
+
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|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
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"health_facilities": 0,
|
| 122 |
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"major_roads": 0,
|
| 123 |
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"schools_waterpoints": 1,
|
| 124 |
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"urban_landuse": 1035,
|
| 125 |
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|
| 126 |
+
"waterways": 0
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 33,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
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"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
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},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0032_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "mwanza_schistosomiasis_s0032_label_positive_jitter",
|
| 6 |
+
"aoi_id": "mwanza_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Tanzania",
|
| 11 |
+
"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 32.82744384460502,
|
| 17 |
+
"lat": -2.6825970632637666
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
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|
| 24 |
+
],
|
| 25 |
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"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
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"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0032_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "8efa9bc403005b0e4eaac1076b8242948701ebd4a5fd3bb43c7141c057685c05",
|
| 34 |
+
"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0032_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0032_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0032_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0032_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0032_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0032_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0032_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
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|
| 48 |
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|
| 49 |
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|
| 50 |
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|
| 51 |
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|
| 52 |
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|
| 53 |
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|
| 54 |
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"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
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|
| 56 |
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|
| 57 |
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"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
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|
| 59 |
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"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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|
| 66 |
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|
| 67 |
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]
|
| 68 |
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}
|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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|
| 73 |
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|
| 74 |
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|
| 75 |
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| 76 |
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| 77 |
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| 78 |
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|
| 79 |
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|
| 80 |
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|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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|
| 83 |
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| 84 |
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| 85 |
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| 86 |
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| 87 |
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| 88 |
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| 89 |
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|
| 90 |
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| 91 |
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| 92 |
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| 93 |
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|
| 94 |
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|
| 95 |
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| 96 |
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| 97 |
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| 98 |
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| 99 |
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"population_worldpop": {
|
| 100 |
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|
| 101 |
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|
| 102 |
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|
| 103 |
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|
| 104 |
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"median": 2.5181,
|
| 105 |
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|
| 106 |
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|
| 108 |
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|
| 109 |
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| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
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|
| 112 |
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|
| 113 |
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"jrc_gsw_transitions": {
|
| 114 |
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"valid_pixels": 0
|
| 115 |
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|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
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"valid_pixels": 0
|
| 118 |
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|
| 119 |
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|
| 120 |
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|
| 121 |
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|
| 122 |
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|
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|
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|
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|
| 126 |
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|
| 127 |
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|
| 128 |
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"label_counts": {
|
| 129 |
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|
| 130 |
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|
| 131 |
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"intermediate_host_label": 85,
|
| 132 |
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"disease_aggregate": 0
|
| 133 |
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}
|
| 134 |
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|
| 135 |
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"label_quality": {
|
| 136 |
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"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
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"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
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},
|
| 145 |
+
"sampling": {
|
| 146 |
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"sample_type": "label_positive_jitter",
|
| 147 |
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"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0033_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
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|
|
|
|
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|
|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "mwanza_schistosomiasis_s0033_label_positive_jitter",
|
| 6 |
+
"aoi_id": "mwanza_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Tanzania",
|
| 11 |
+
"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
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"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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|
| 14 |
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"pixels": 512,
|
| 15 |
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|
| 16 |
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|
| 17 |
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|
| 18 |
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|
| 19 |
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|
| 20 |
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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],
|
| 25 |
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"panel_order": [
|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
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"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
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"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
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"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0033_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "6d8e2fd4842f3f2a393f1baed4b6b14a7f38d6ccff928082c4a56d086ae29d53",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0033_label_positive_jitter",
|
| 40 |
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"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0033_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0033_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0033_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0033_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
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"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0033_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
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"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0033_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
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"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/mwanza_tanzania/mwanza_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/mwanza_tanzania/mwanza_worldpop_2025_constrained_100m.tif",
|
| 50 |
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"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/mwanza_tanzania/osm_major_roads_mwanza.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
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|
| 67 |
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]
|
| 68 |
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}
|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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|
| 75 |
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|
| 76 |
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|
| 77 |
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|
| 78 |
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|
| 79 |
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"sentinel_source": "sentinel-2c",
|
| 80 |
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|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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|
| 83 |
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|
| 84 |
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|
| 85 |
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| 86 |
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"numeric_features": {
|
| 87 |
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| 88 |
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|
| 89 |
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|
| 90 |
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|
| 91 |
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|
| 92 |
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|
| 93 |
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|
| 94 |
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|
| 95 |
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|
| 96 |
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|
| 97 |
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| 98 |
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|
| 99 |
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"population_worldpop": {
|
| 100 |
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|
| 101 |
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|
| 102 |
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|
| 103 |
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|
| 104 |
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|
| 105 |
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|
| 106 |
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|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
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|
| 109 |
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},
|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
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|
| 112 |
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|
| 113 |
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|
| 114 |
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|
| 115 |
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|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
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|
| 118 |
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}
|
| 119 |
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},
|
| 120 |
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|
| 121 |
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|
| 122 |
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|
| 123 |
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|
| 124 |
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|
| 125 |
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|
| 126 |
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|
| 127 |
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|
| 128 |
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|
| 129 |
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|
| 130 |
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|
| 131 |
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|
| 132 |
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|
| 133 |
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}
|
| 134 |
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},
|
| 135 |
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"label_quality": {
|
| 136 |
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"tier": "weak_label_positive",
|
| 137 |
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"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
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},
|
| 139 |
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"license_flags": {
|
| 140 |
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"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
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},
|
| 145 |
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"sampling": {
|
| 146 |
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"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0034_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
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|
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|
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|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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|
| 4 |
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"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
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|
| 6 |
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|
| 7 |
+
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|
| 8 |
+
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|
| 9 |
+
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|
| 10 |
+
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|
| 11 |
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"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
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|
| 13 |
+
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|
| 14 |
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|
| 15 |
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|
| 16 |
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|
| 17 |
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|
| 18 |
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|
| 19 |
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|
| 20 |
+
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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|
| 25 |
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|
| 26 |
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|
| 27 |
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|
| 28 |
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|
| 29 |
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|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
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"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0034_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "2ab7e45a2b37208135540e25189c6347a14453fa30e3bbc231f4cdc21ea6614a",
|
| 34 |
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|
| 35 |
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|
| 36 |
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|
| 37 |
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"source_assets": {
|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
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"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0034_label_positive_jitter",
|
| 40 |
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|
| 41 |
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"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0034_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0034_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0034_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
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"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0034_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
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"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0034_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
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"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/mwanza_tanzania/mwanza_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/mwanza_tanzania/mwanza_worldpop_2025_constrained_100m.tif",
|
| 50 |
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"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/mwanza_tanzania/osm_major_roads_mwanza.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
+
},
|
| 64 |
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"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
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"data/raw/map_gbif/mwanza_tanzania/gbif_freshwater_snails_mwanza_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 4.524451,
|
| 78 |
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"sentinel_datetime": "2025-09-10T08:20:59Z",
|
| 79 |
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"sentinel_source": "sentinel-2c",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 56.9942,
|
| 84 |
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|
| 85 |
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|
| 86 |
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|
| 87 |
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|
| 88 |
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|
| 89 |
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|
| 90 |
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|
| 91 |
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"max": 0.0,
|
| 92 |
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"mean": 0.0,
|
| 93 |
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"median": 0.0,
|
| 94 |
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"p90": 0.0
|
| 95 |
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},
|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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|
| 101 |
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|
| 102 |
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|
| 103 |
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|
| 104 |
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|
| 105 |
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|
| 106 |
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|
| 107 |
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|
| 108 |
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|
| 109 |
+
},
|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
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|
| 112 |
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},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
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|
| 118 |
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}
|
| 119 |
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},
|
| 120 |
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|
| 121 |
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|
| 122 |
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"major_roads": 1,
|
| 123 |
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"schools_waterpoints": 8,
|
| 124 |
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|
| 125 |
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|
| 126 |
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|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
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|
| 130 |
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"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 29,
|
| 132 |
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"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
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},
|
| 139 |
+
"license_flags": {
|
| 140 |
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"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
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},
|
| 145 |
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"sampling": {
|
| 146 |
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"sample_type": "label_positive_jitter",
|
| 147 |
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"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0035_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "mwanza_schistosomiasis_s0035_label_positive_jitter",
|
| 6 |
+
"aoi_id": "mwanza_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Tanzania",
|
| 11 |
+
"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 32.87018905093734,
|
| 17 |
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"lat": -2.625437435779085
|
| 18 |
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|
| 19 |
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"bbox": [
|
| 20 |
+
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
+
],
|
| 25 |
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"panel_order": [
|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
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|
| 28 |
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|
| 29 |
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"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0035_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "7cf3ffa17f4fbe7a7d80637566343371833506cdedf69ef081edcd372e4f8c38",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0035_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0035_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
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"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0035_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0035_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0035_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
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"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0035_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0035_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
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|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/mwanza_tanzania/mwanza_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/mwanza_tanzania/mwanza_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
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"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/mwanza_tanzania/osm_major_roads_mwanza.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/mwanza_tanzania/gbif_freshwater_snails_mwanza_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 4.524451,
|
| 78 |
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"sentinel_datetime": "2025-09-10T08:20:59Z",
|
| 79 |
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"sentinel_source": "sentinel-2c",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 50.8355,
|
| 84 |
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|
| 85 |
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|
| 86 |
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"numeric_features": {
|
| 87 |
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|
| 88 |
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"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 0.0,
|
| 91 |
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"max": 0.0,
|
| 92 |
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"mean": 0.0,
|
| 93 |
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"median": 0.0,
|
| 94 |
+
"p90": 0.0
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
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"valid_pixels": 147408,
|
| 101 |
+
"min": 0.0547,
|
| 102 |
+
"max": 40.6745,
|
| 103 |
+
"mean": 12.1151,
|
| 104 |
+
"median": 10.6099,
|
| 105 |
+
"p90": 23.7179
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 0,
|
| 122 |
+
"major_roads": 1,
|
| 123 |
+
"schools_waterpoints": 2,
|
| 124 |
+
"urban_landuse": 2753,
|
| 125 |
+
"water_surface": 40,
|
| 126 |
+
"waterways": 3
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 30,
|
| 132 |
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"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0036_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
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|
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|
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|
|
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|
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|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "mwanza_schistosomiasis_s0036_label_positive_jitter",
|
| 6 |
+
"aoi_id": "mwanza_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Tanzania",
|
| 11 |
+
"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 32.82080394107123,
|
| 17 |
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"lat": -2.6690482904576407
|
| 18 |
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},
|
| 19 |
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"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
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|
| 23 |
+
-2.6465652503096724
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0036_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "5fe8c67d730dca9924e35a25bb35241581a8e3c2f32cb168466331e086e07897",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0036_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0036_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0036_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0036_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0036_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0036_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0036_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
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"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/mwanza_tanzania/mwanza_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/mwanza_tanzania/mwanza_worldpop_2025_constrained_100m.tif",
|
| 50 |
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"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/mwanza_tanzania/osm_major_roads_mwanza.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
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|
| 67 |
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]
|
| 68 |
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}
|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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|
| 76 |
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|
| 77 |
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"sentinel_cloud_cover_percent": 4.524451,
|
| 78 |
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"sentinel_datetime": "2025-09-10T08:20:59Z",
|
| 79 |
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"sentinel_source": "sentinel-2c",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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|
| 83 |
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|
| 84 |
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|
| 85 |
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|
| 86 |
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"numeric_features": {
|
| 87 |
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| 88 |
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|
| 89 |
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|
| 90 |
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|
| 91 |
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|
| 92 |
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|
| 93 |
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|
| 94 |
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|
| 95 |
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|
| 96 |
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|
| 97 |
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|
| 98 |
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|
| 99 |
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|
| 100 |
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|
| 101 |
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|
| 102 |
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|
| 103 |
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|
| 104 |
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|
| 105 |
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|
| 106 |
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|
| 107 |
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|
| 108 |
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|
| 109 |
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|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
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|
| 112 |
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|
| 113 |
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|
| 114 |
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|
| 115 |
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|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
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|
| 118 |
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|
| 119 |
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|
| 120 |
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|
| 121 |
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|
| 122 |
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|
| 123 |
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|
| 124 |
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|
| 125 |
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|
| 126 |
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|
| 127 |
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|
| 128 |
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|
| 129 |
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|
| 130 |
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|
| 131 |
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|
| 132 |
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|
| 133 |
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|
| 134 |
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},
|
| 135 |
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|
| 136 |
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"tier": "weak_label_positive",
|
| 137 |
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"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
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},
|
| 139 |
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|
| 140 |
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|
| 141 |
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|
| 142 |
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|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
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},
|
| 145 |
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"sampling": {
|
| 146 |
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"sample_type": "label_positive_jitter",
|
| 147 |
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|
| 148 |
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}
|
| 149 |
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}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0038_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
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|
|
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|
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|
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|
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|
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|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "mwanza_schistosomiasis_s0038_label_positive_jitter",
|
| 6 |
+
"aoi_id": "mwanza_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Tanzania",
|
| 11 |
+
"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 32.834778368511195,
|
| 17 |
+
"lat": -2.6670889791034607
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
32.81227094761334,
|
| 21 |
+
-2.689572019251429,
|
| 22 |
+
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|
| 23 |
+
-2.6446059389554923
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0038_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "b645f22b723b026d1d20215e0405f9ed6a4364fc78f8b74fa61ad6d7708135df",
|
| 34 |
+
"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0038_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0038_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0038_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0038_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0038_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0038_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0038_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/mwanza_tanzania/mwanza_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/mwanza_tanzania/mwanza_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/mwanza_tanzania/osm_major_roads_mwanza.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/mwanza_tanzania/gbif_freshwater_snails_mwanza_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 4.524451,
|
| 78 |
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"sentinel_datetime": "2025-09-10T08:20:59Z",
|
| 79 |
+
"sentinel_source": "sentinel-2c",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 49.8556,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
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"min": 0.0,
|
| 91 |
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"max": 0.0,
|
| 92 |
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"mean": 0.0,
|
| 93 |
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"median": 0.0,
|
| 94 |
+
"p90": 0.0
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 54484,
|
| 101 |
+
"min": 0.027,
|
| 102 |
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"max": 13.5765,
|
| 103 |
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"mean": 2.8452,
|
| 104 |
+
"median": 2.3246,
|
| 105 |
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"p90": 5.8593
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 0,
|
| 122 |
+
"major_roads": 0,
|
| 123 |
+
"schools_waterpoints": 0,
|
| 124 |
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"urban_landuse": 293,
|
| 125 |
+
"water_surface": 0,
|
| 126 |
+
"waterways": 0
|
| 127 |
+
},
|
| 128 |
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"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 85,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0039_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "mwanza_schistosomiasis_s0039_label_positive_jitter",
|
| 6 |
+
"aoi_id": "mwanza_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Tanzania",
|
| 11 |
+
"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
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"lon": 32.92648878791925,
|
| 17 |
+
"lat": -2.4138878973284488
|
| 18 |
+
},
|
| 19 |
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"bbox": [
|
| 20 |
+
32.90398577973885,
|
| 21 |
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|
| 22 |
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|
| 23 |
+
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|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0039_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "42739983badd5583f536142ee18c6cd4ea7f0e196fb90cbdc38fc266aaedf4b4",
|
| 34 |
+
"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0039_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0039_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0039_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0039_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0039_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0039_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0039_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/mwanza_tanzania/mwanza_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/mwanza_tanzania/mwanza_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/mwanza_tanzania/osm_major_roads_mwanza.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/mwanza_tanzania/gbif_freshwater_snails_mwanza_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 4.524451,
|
| 78 |
+
"sentinel_datetime": "2025-09-10T08:20:59Z",
|
| 79 |
+
"sentinel_source": "sentinel-2c",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 47.9786,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 0.0,
|
| 91 |
+
"max": 0.0,
|
| 92 |
+
"mean": 0.0,
|
| 93 |
+
"median": 0.0,
|
| 94 |
+
"p90": 0.0
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 87759,
|
| 101 |
+
"min": 0.173,
|
| 102 |
+
"max": 41.7258,
|
| 103 |
+
"mean": 11.742,
|
| 104 |
+
"median": 7.6861,
|
| 105 |
+
"p90": 29.7061
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 0,
|
| 122 |
+
"major_roads": 0,
|
| 123 |
+
"schools_waterpoints": 2,
|
| 124 |
+
"urban_landuse": 2299,
|
| 125 |
+
"water_surface": 1,
|
| 126 |
+
"waterways": 2
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 62,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0040_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
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|
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|
|
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|
|
|
|
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|
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|
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|
|
|
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|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "mwanza_schistosomiasis_s0040_label_positive_jitter",
|
| 6 |
+
"aoi_id": "mwanza_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Tanzania",
|
| 11 |
+
"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 32.841332048603725,
|
| 17 |
+
"lat": -2.686749365747677
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
32.86383983060153,
|
| 23 |
+
-2.6642663255997086
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0040_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "1e9f281bc992a0ac8e52ba60497a7b44d3555f9fcce58bf68e3df4b1f427a4df",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0040_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0040_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0040_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0040_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0040_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0040_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0040_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/mwanza_tanzania/mwanza_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/mwanza_tanzania/mwanza_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/mwanza_tanzania/osm_major_roads_mwanza.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
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"data/raw/map_gbif/mwanza_tanzania/gbif_freshwater_snails_mwanza_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
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}
|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 4.524451,
|
| 78 |
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"sentinel_datetime": "2025-09-10T08:20:59Z",
|
| 79 |
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"sentinel_source": "sentinel-2c",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 43.4767,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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|
| 90 |
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"min": 0.0,
|
| 91 |
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|
| 92 |
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|
| 93 |
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"median": 0.0,
|
| 94 |
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"p90": 0.0
|
| 95 |
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},
|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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|
| 101 |
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|
| 102 |
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|
| 103 |
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|
| 104 |
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|
| 105 |
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"p90": 6.197
|
| 106 |
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},
|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
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"valid_pixels": 0
|
| 109 |
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},
|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
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},
|
| 113 |
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"jrc_gsw_transitions": {
|
| 114 |
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"valid_pixels": 0
|
| 115 |
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},
|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
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|
| 118 |
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}
|
| 119 |
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},
|
| 120 |
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"osm_counts": {
|
| 121 |
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|
| 122 |
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|
| 123 |
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|
| 124 |
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|
| 125 |
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|
| 126 |
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|
| 127 |
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},
|
| 128 |
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"label_counts": {
|
| 129 |
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|
| 130 |
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|
| 131 |
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|
| 132 |
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"disease_aggregate": 0
|
| 133 |
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}
|
| 134 |
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},
|
| 135 |
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"label_quality": {
|
| 136 |
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"tier": "weak_label_positive",
|
| 137 |
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"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
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"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0041_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
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|
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|
|
|
|
|
|
|
|
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|
|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "mwanza_schistosomiasis_s0041_label_positive_jitter",
|
| 6 |
+
"aoi_id": "mwanza_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Tanzania",
|
| 11 |
+
"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 32.81564812251501,
|
| 17 |
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"lat": -2.6725369454535137
|
| 18 |
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},
|
| 19 |
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"bbox": [
|
| 20 |
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|
| 21 |
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|
| 22 |
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|
| 23 |
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-2.6500539053055454
|
| 24 |
+
],
|
| 25 |
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"panel_order": [
|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
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"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
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"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0041_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "a5749e8c9dcf465a77d87f3e67c6f2b7770e4025ec85f4f0da650629738e0429",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0041_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0041_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0041_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0041_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0041_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0041_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0041_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/mwanza_tanzania/mwanza_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/mwanza_tanzania/mwanza_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/mwanza_tanzania/osm_major_roads_mwanza.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
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"data/raw/map_gbif/mwanza_tanzania/gbif_freshwater_snails_mwanza_occurrences.csv"
|
| 67 |
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]
|
| 68 |
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}
|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 4.524451,
|
| 78 |
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"sentinel_datetime": "2025-09-10T08:20:59Z",
|
| 79 |
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"sentinel_source": "sentinel-2c",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 57.7198,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
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},
|
| 86 |
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"numeric_features": {
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| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": 0.0,
|
| 91 |
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"max": 0.0,
|
| 92 |
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"mean": 0.0,
|
| 93 |
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"median": 0.0,
|
| 94 |
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"p90": 0.0
|
| 95 |
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},
|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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"valid_pixels": 0
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| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 98538,
|
| 101 |
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"min": 0.027,
|
| 102 |
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"max": 15.6472,
|
| 103 |
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"mean": 3.1104,
|
| 104 |
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"median": 2.498,
|
| 105 |
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|
| 106 |
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},
|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
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"valid_pixels": 0
|
| 109 |
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},
|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
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"valid_pixels": 0
|
| 112 |
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},
|
| 113 |
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"jrc_gsw_transitions": {
|
| 114 |
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"valid_pixels": 0
|
| 115 |
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},
|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
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"valid_pixels": 0
|
| 118 |
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}
|
| 119 |
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},
|
| 120 |
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"osm_counts": {
|
| 121 |
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"health_facilities": 0,
|
| 122 |
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"major_roads": 1,
|
| 123 |
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"schools_waterpoints": 0,
|
| 124 |
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"urban_landuse": 745,
|
| 125 |
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"water_surface": 0,
|
| 126 |
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"waterways": 0
|
| 127 |
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},
|
| 128 |
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"label_counts": {
|
| 129 |
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"vector_label": 0,
|
| 130 |
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"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 83,
|
| 132 |
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"disease_aggregate": 0
|
| 133 |
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}
|
| 134 |
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},
|
| 135 |
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"label_quality": {
|
| 136 |
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"tier": "weak_label_positive",
|
| 137 |
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"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
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},
|
| 139 |
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"license_flags": {
|
| 140 |
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"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
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},
|
| 145 |
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"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
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"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0045_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "mwanza_schistosomiasis_s0045_label_positive_jitter",
|
| 6 |
+
"aoi_id": "mwanza_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
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"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Tanzania",
|
| 11 |
+
"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
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"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 32.74791217188459,
|
| 17 |
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"lat": -2.53446434649944
|
| 18 |
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},
|
| 19 |
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"bbox": [
|
| 20 |
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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],
|
| 25 |
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"panel_order": [
|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
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"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0045_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "02240890737a63b41ed6bf242838bf3d99dc54d077b0d9053d18925b9a48d02a",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
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"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0045_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0045_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
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"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0045_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0045_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0045_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0045_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0045_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/mwanza_tanzania/mwanza_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/mwanza_tanzania/mwanza_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/mwanza_tanzania/osm_major_roads_mwanza.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/mwanza_tanzania/gbif_freshwater_snails_mwanza_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 4.524451,
|
| 78 |
+
"sentinel_datetime": "2025-09-10T08:20:59Z",
|
| 79 |
+
"sentinel_source": "sentinel-2c",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 55.8398,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 0.0,
|
| 91 |
+
"max": 0.0,
|
| 92 |
+
"mean": 0.0,
|
| 93 |
+
"median": 0.0,
|
| 94 |
+
"p90": 0.0
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 103868,
|
| 101 |
+
"min": 0.0342,
|
| 102 |
+
"max": 15.6258,
|
| 103 |
+
"mean": 3.0651,
|
| 104 |
+
"median": 2.1592,
|
| 105 |
+
"p90": 7.6298
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 0,
|
| 122 |
+
"major_roads": 1,
|
| 123 |
+
"schools_waterpoints": 1,
|
| 124 |
+
"urban_landuse": 663,
|
| 125 |
+
"water_surface": 3,
|
| 126 |
+
"waterways": 0
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 48,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0046_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
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|
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|
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|
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|
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|
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|
|
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|
|
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|
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|
|
|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "mwanza_schistosomiasis_s0046_label_positive_jitter",
|
| 6 |
+
"aoi_id": "mwanza_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Tanzania",
|
| 11 |
+
"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 32.897088684757485,
|
| 17 |
+
"lat": -2.589643853830461
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
-2.6121268939784295,
|
| 22 |
+
32.91959470912026,
|
| 23 |
+
-2.567160813682493
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0046_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "98f0f06873a80805da26066495f7d4ebb1e40f87d570e2296619e33f32c79d40",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0046_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0046_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0046_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0046_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0046_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0046_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0046_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/mwanza_tanzania/mwanza_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/mwanza_tanzania/mwanza_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/mwanza_tanzania/osm_major_roads_mwanza.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/mwanza_tanzania/gbif_freshwater_snails_mwanza_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 4.524451,
|
| 78 |
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"sentinel_datetime": "2025-09-10T08:20:59Z",
|
| 79 |
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"sentinel_source": "sentinel-2c",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 49.6308,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": 0.0,
|
| 91 |
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"max": 0.0,
|
| 92 |
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"mean": 0.0,
|
| 93 |
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"median": 0.0,
|
| 94 |
+
"p90": 0.0
|
| 95 |
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},
|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 189095,
|
| 101 |
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|
| 102 |
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|
| 103 |
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|
| 104 |
+
"median": 25.5653,
|
| 105 |
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"p90": 52.4225
|
| 106 |
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},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
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"health_facilities": 4,
|
| 122 |
+
"major_roads": 7,
|
| 123 |
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"schools_waterpoints": 19,
|
| 124 |
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"urban_landuse": 11286,
|
| 125 |
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|
| 126 |
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"waterways": 1
|
| 127 |
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},
|
| 128 |
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"label_counts": {
|
| 129 |
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"vector_label": 0,
|
| 130 |
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"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 48,
|
| 132 |
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"disease_aggregate": 0
|
| 133 |
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}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0047_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "mwanza_schistosomiasis_s0047_label_positive_jitter",
|
| 6 |
+
"aoi_id": "mwanza_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Tanzania",
|
| 11 |
+
"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 32.83244798537279,
|
| 17 |
+
"lat": -2.6723383070420614
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
-2.649855266894093
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0047_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "01c5a98631473028668f97ff583c57c574d731641c5478cf213038bcc1460a21",
|
| 34 |
+
"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0047_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0047_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0047_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0047_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0047_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0047_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0047_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/mwanza_tanzania/mwanza_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/mwanza_tanzania/mwanza_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/mwanza_tanzania/osm_major_roads_mwanza.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
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"data/raw/map_gbif/mwanza_tanzania/gbif_freshwater_snails_mwanza_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
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}
|
| 69 |
+
},
|
| 70 |
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"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
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"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 4.524451,
|
| 78 |
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"sentinel_datetime": "2025-09-10T08:20:59Z",
|
| 79 |
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"sentinel_source": "sentinel-2c",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 53.5277,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": 0.0,
|
| 91 |
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"max": 0.0,
|
| 92 |
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"mean": 0.0,
|
| 93 |
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"median": 0.0,
|
| 94 |
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"p90": 0.0
|
| 95 |
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},
|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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"valid_pixels": 0
|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 58204,
|
| 101 |
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"min": 0.027,
|
| 102 |
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"max": 13.4801,
|
| 103 |
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"mean": 2.7947,
|
| 104 |
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"median": 2.2123,
|
| 105 |
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"p90": 5.8268
|
| 106 |
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},
|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
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"valid_pixels": 0
|
| 109 |
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},
|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
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"valid_pixels": 0
|
| 112 |
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},
|
| 113 |
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"jrc_gsw_transitions": {
|
| 114 |
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"valid_pixels": 0
|
| 115 |
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},
|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
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"valid_pixels": 0
|
| 118 |
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}
|
| 119 |
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},
|
| 120 |
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"osm_counts": {
|
| 121 |
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"health_facilities": 0,
|
| 122 |
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"major_roads": 0,
|
| 123 |
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"schools_waterpoints": 0,
|
| 124 |
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"urban_landuse": 294,
|
| 125 |
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"water_surface": 0,
|
| 126 |
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"waterways": 0
|
| 127 |
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},
|
| 128 |
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"label_counts": {
|
| 129 |
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"vector_label": 0,
|
| 130 |
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"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 85,
|
| 132 |
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"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0052_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "mwanza_schistosomiasis_s0052_label_positive_jitter",
|
| 6 |
+
"aoi_id": "mwanza_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Tanzania",
|
| 11 |
+
"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 32.86614154583495,
|
| 17 |
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"lat": -2.630899609270097
|
| 18 |
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},
|
| 19 |
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"bbox": [
|
| 20 |
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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],
|
| 25 |
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"panel_order": [
|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0052_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "b35f8aeee5ea9e0f7609b99869d270e3107f35364ba56ce3ab6756a5c9d4530a",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0052_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0052_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0052_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0052_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0052_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0052_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0052_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/mwanza_tanzania/mwanza_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/mwanza_tanzania/mwanza_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/mwanza_tanzania/osm_major_roads_mwanza.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/mwanza_tanzania/gbif_freshwater_snails_mwanza_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 4.524451,
|
| 78 |
+
"sentinel_datetime": "2025-09-10T08:20:59Z",
|
| 79 |
+
"sentinel_source": "sentinel-2c",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 48.286,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 0.0,
|
| 91 |
+
"max": 0.0,
|
| 92 |
+
"mean": 0.0,
|
| 93 |
+
"median": 0.0,
|
| 94 |
+
"p90": 0.0
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 124821,
|
| 101 |
+
"min": 0.0547,
|
| 102 |
+
"max": 40.688,
|
| 103 |
+
"mean": 12.9711,
|
| 104 |
+
"median": 11.7901,
|
| 105 |
+
"p90": 24.6185
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 0,
|
| 122 |
+
"major_roads": 0,
|
| 123 |
+
"schools_waterpoints": 2,
|
| 124 |
+
"urban_landuse": 2584,
|
| 125 |
+
"water_surface": 40,
|
| 126 |
+
"waterways": 3
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 30,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0053_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
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|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "mwanza_schistosomiasis_s0053_label_positive_jitter",
|
| 6 |
+
"aoi_id": "mwanza_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Tanzania",
|
| 11 |
+
"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 32.8202594458989,
|
| 17 |
+
"lat": -2.676458667934093
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
32.79775185324109,
|
| 21 |
+
-2.6989417080820615,
|
| 22 |
+
32.84276703855671,
|
| 23 |
+
-2.653975627786125
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0053_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "5aa41bd291397c625f59f41af3265b618f01937ef99678179eb3c5c29506f0d0",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0053_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0053_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0053_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0053_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0053_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0053_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0053_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/mwanza_tanzania/mwanza_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/mwanza_tanzania/mwanza_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/mwanza_tanzania/osm_major_roads_mwanza.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/mwanza_tanzania/gbif_freshwater_snails_mwanza_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 4.524451,
|
| 78 |
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"sentinel_datetime": "2025-09-10T08:20:59Z",
|
| 79 |
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"sentinel_source": "sentinel-2c",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 57.5669,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": 0.0,
|
| 91 |
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"max": 0.0,
|
| 92 |
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"mean": 0.0,
|
| 93 |
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"median": 0.0,
|
| 94 |
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"p90": 0.0
|
| 95 |
+
},
|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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"valid_pixels": 0
|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 86558,
|
| 101 |
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"min": 0.027,
|
| 102 |
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"max": 15.6233,
|
| 103 |
+
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|
| 104 |
+
"median": 2.7931,
|
| 105 |
+
"p90": 6.7289
|
| 106 |
+
},
|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
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"osm_counts": {
|
| 121 |
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"health_facilities": 0,
|
| 122 |
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"major_roads": 1,
|
| 123 |
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"schools_waterpoints": 0,
|
| 124 |
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"urban_landuse": 693,
|
| 125 |
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"water_surface": 0,
|
| 126 |
+
"waterways": 0
|
| 127 |
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},
|
| 128 |
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"label_counts": {
|
| 129 |
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"vector_label": 0,
|
| 130 |
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"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 85,
|
| 132 |
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"disease_aggregate": 0
|
| 133 |
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}
|
| 134 |
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},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0054_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "mwanza_schistosomiasis_s0054_label_positive_jitter",
|
| 6 |
+
"aoi_id": "mwanza_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Tanzania",
|
| 11 |
+
"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 32.930923486710896,
|
| 17 |
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"lat": -2.410070605839304
|
| 18 |
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},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
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|
| 22 |
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|
| 23 |
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-2.387587565691336
|
| 24 |
+
],
|
| 25 |
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"panel_order": [
|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
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"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
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"bottom_left: Mapbox satellite context",
|
| 29 |
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"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0054_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "98db5d6c954d8c39474b5a224a1191740f47aa7d84a7dc0c03dcd2e0a13d64cf",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0054_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0054_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0054_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0054_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0054_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0054_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0054_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/mwanza_tanzania/mwanza_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/mwanza_tanzania/mwanza_worldpop_2025_constrained_100m.tif",
|
| 50 |
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"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/mwanza_tanzania/osm_major_roads_mwanza.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
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"data/raw/map_gbif/mwanza_tanzania/gbif_freshwater_snails_mwanza_occurrences.csv"
|
| 67 |
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]
|
| 68 |
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}
|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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|
| 77 |
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|
| 78 |
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"sentinel_datetime": "2025-09-10T08:20:59Z",
|
| 79 |
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"sentinel_source": "sentinel-2c",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 49.3409,
|
| 84 |
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|
| 85 |
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|
| 86 |
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"numeric_features": {
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| 87 |
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| 88 |
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| 89 |
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|
| 90 |
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|
| 91 |
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"max": 0.0,
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| 92 |
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"mean": 0.0,
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| 93 |
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"median": 0.0,
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| 94 |
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"p90": 0.0
|
| 95 |
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|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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|
| 101 |
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"min": 0.173,
|
| 102 |
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|
| 103 |
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|
| 104 |
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"median": 7.8833,
|
| 105 |
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|
| 106 |
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|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
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"valid_pixels": 0
|
| 109 |
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},
|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
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"valid_pixels": 0
|
| 112 |
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},
|
| 113 |
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"jrc_gsw_transitions": {
|
| 114 |
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"valid_pixels": 0
|
| 115 |
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},
|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
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"valid_pixels": 0
|
| 118 |
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}
|
| 119 |
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},
|
| 120 |
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"osm_counts": {
|
| 121 |
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"health_facilities": 0,
|
| 122 |
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"major_roads": 0,
|
| 123 |
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"schools_waterpoints": 2,
|
| 124 |
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"urban_landuse": 2413,
|
| 125 |
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"water_surface": 1,
|
| 126 |
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"waterways": 0
|
| 127 |
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},
|
| 128 |
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"label_counts": {
|
| 129 |
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"vector_label": 0,
|
| 130 |
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"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 62,
|
| 132 |
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"disease_aggregate": 0
|
| 133 |
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}
|
| 134 |
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},
|
| 135 |
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"label_quality": {
|
| 136 |
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"tier": "weak_label_positive",
|
| 137 |
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"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
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},
|
| 139 |
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"license_flags": {
|
| 140 |
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"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
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},
|
| 145 |
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"sampling": {
|
| 146 |
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"sample_type": "label_positive_jitter",
|
| 147 |
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"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0055_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "mwanza_schistosomiasis_s0055_label_positive_jitter",
|
| 6 |
+
"aoi_id": "mwanza_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
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"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Tanzania",
|
| 11 |
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"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
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"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 32.83484595937916,
|
| 17 |
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"lat": -2.665009023443135
|
| 18 |
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},
|
| 19 |
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"bbox": [
|
| 20 |
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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],
|
| 25 |
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"panel_order": [
|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
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"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0055_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "84a1931df75ae9edc72ca6e42c74726a39fa0b1aa69d1a6375eda399327c986f",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0055_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0055_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0055_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0055_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0055_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0055_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0055_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/mwanza_tanzania/mwanza_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/mwanza_tanzania/mwanza_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/mwanza_tanzania/osm_major_roads_mwanza.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/mwanza_tanzania/gbif_freshwater_snails_mwanza_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 4.524451,
|
| 78 |
+
"sentinel_datetime": "2025-09-10T08:20:59Z",
|
| 79 |
+
"sentinel_source": "sentinel-2c",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 48.2959,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 0.0,
|
| 91 |
+
"max": 0.0,
|
| 92 |
+
"mean": 0.0,
|
| 93 |
+
"median": 0.0,
|
| 94 |
+
"p90": 0.0
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 54259,
|
| 101 |
+
"min": 0.027,
|
| 102 |
+
"max": 13.6663,
|
| 103 |
+
"mean": 2.8413,
|
| 104 |
+
"median": 2.3213,
|
| 105 |
+
"p90": 5.8569
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 0,
|
| 122 |
+
"major_roads": 0,
|
| 123 |
+
"schools_waterpoints": 0,
|
| 124 |
+
"urban_landuse": 293,
|
| 125 |
+
"water_surface": 0,
|
| 126 |
+
"waterways": 0
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 85,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0057_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
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|
|
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|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "mwanza_schistosomiasis_s0057_label_positive_jitter",
|
| 6 |
+
"aoi_id": "mwanza_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Tanzania",
|
| 11 |
+
"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 32.88753712237762,
|
| 17 |
+
"lat": -2.569309961055534
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
-2.591793001203502,
|
| 22 |
+
32.91004278691172,
|
| 23 |
+
-2.5468269209075656
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0057_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "4f1d745d308de7a533eac53d6e58c6e831fdf33c4d5ab63653d61cfdbac68973",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0057_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0057_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0057_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0057_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0057_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0057_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0057_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/mwanza_tanzania/mwanza_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/mwanza_tanzania/mwanza_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
+
"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/mwanza_tanzania/osm_major_roads_mwanza.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/mwanza_tanzania/gbif_freshwater_snails_mwanza_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
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},
|
| 70 |
+
"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 4.524451,
|
| 78 |
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"sentinel_datetime": "2025-09-10T08:20:59Z",
|
| 79 |
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"sentinel_source": "sentinel-2c",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 40.3345,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": 0.0,
|
| 91 |
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"max": 0.0,
|
| 92 |
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"mean": 0.0,
|
| 93 |
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"median": 0.0,
|
| 94 |
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"p90": 0.0
|
| 95 |
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},
|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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"valid_pixels": 0
|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 83230,
|
| 101 |
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"min": 0.0727,
|
| 102 |
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"max": 58.9354,
|
| 103 |
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"mean": 16.3688,
|
| 104 |
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"median": 10.0103,
|
| 105 |
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"p90": 44.7747
|
| 106 |
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},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
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},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
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},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
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}
|
| 119 |
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},
|
| 120 |
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"osm_counts": {
|
| 121 |
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"health_facilities": 1,
|
| 122 |
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"major_roads": 6,
|
| 123 |
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"schools_waterpoints": 6,
|
| 124 |
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"urban_landuse": 3529,
|
| 125 |
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"water_surface": 0,
|
| 126 |
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"waterways": 0
|
| 127 |
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},
|
| 128 |
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"label_counts": {
|
| 129 |
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"vector_label": 0,
|
| 130 |
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"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 48,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0058_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "mwanza_schistosomiasis_s0058_label_positive_jitter",
|
| 6 |
+
"aoi_id": "mwanza_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Tanzania",
|
| 11 |
+
"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
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"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 32.902035159970296,
|
| 17 |
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"lat": -2.592337572693363
|
| 18 |
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},
|
| 19 |
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"bbox": [
|
| 20 |
+
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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],
|
| 25 |
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"panel_order": [
|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
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"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
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"bottom_left: Mapbox satellite context",
|
| 29 |
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"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
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],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0058_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "c9b9aba435013af3a0e5fd475f6b9b3e2eda91270f2ad88e165ff4f20237d9df",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0058_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0058_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0058_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0058_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0058_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0058_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0058_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/mwanza_tanzania/mwanza_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/mwanza_tanzania/mwanza_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/mwanza_tanzania/osm_major_roads_mwanza.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
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|
| 67 |
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]
|
| 68 |
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}
|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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|
| 77 |
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|
| 78 |
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"sentinel_datetime": "2025-09-10T08:20:59Z",
|
| 79 |
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"sentinel_source": "sentinel-2c",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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|
| 84 |
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|
| 85 |
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| 86 |
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| 87 |
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| 88 |
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| 89 |
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| 90 |
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"min": 0.0,
|
| 91 |
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"max": 0.0,
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| 92 |
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"mean": 0.0,
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| 93 |
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"median": 0.0,
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| 94 |
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"p90": 0.0
|
| 95 |
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| 96 |
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"land_cover_worldcover": {
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| 97 |
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| 98 |
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| 99 |
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"population_worldpop": {
|
| 100 |
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| 101 |
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|
| 102 |
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|
| 103 |
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|
| 104 |
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"median": 32.2853,
|
| 105 |
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|
| 106 |
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|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
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"valid_pixels": 0
|
| 109 |
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|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
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"valid_pixels": 0
|
| 112 |
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},
|
| 113 |
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"jrc_gsw_transitions": {
|
| 114 |
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"valid_pixels": 0
|
| 115 |
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|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
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"valid_pixels": 0
|
| 118 |
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}
|
| 119 |
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},
|
| 120 |
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"osm_counts": {
|
| 121 |
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"health_facilities": 7,
|
| 122 |
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"major_roads": 8,
|
| 123 |
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"schools_waterpoints": 21,
|
| 124 |
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"urban_landuse": 14677,
|
| 125 |
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"water_surface": 5,
|
| 126 |
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"waterways": 3
|
| 127 |
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},
|
| 128 |
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"label_counts": {
|
| 129 |
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"vector_label": 0,
|
| 130 |
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"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 48,
|
| 132 |
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"disease_aggregate": 0
|
| 133 |
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}
|
| 134 |
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},
|
| 135 |
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"label_quality": {
|
| 136 |
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"tier": "weak_label_positive",
|
| 137 |
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"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
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},
|
| 139 |
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"license_flags": {
|
| 140 |
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"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
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},
|
| 145 |
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"sampling": {
|
| 146 |
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"sample_type": "label_positive_jitter",
|
| 147 |
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"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0059_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "mwanza_schistosomiasis_s0059_label_positive_jitter",
|
| 6 |
+
"aoi_id": "mwanza_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Tanzania",
|
| 11 |
+
"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
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"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 32.81827988917428,
|
| 17 |
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"lat": -2.6652771176139383
|
| 18 |
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},
|
| 19 |
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"bbox": [
|
| 20 |
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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],
|
| 25 |
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"panel_order": [
|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0059_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "89ccfeece7ef957dfc5d09598129367dc1bc21071c3e9fd268061e410afcf5ce",
|
| 34 |
+
"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0059_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0059_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0059_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0059_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0059_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0059_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0059_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/mwanza_tanzania/mwanza_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/mwanza_tanzania/mwanza_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/mwanza_tanzania/osm_major_roads_mwanza.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/mwanza_tanzania/gbif_freshwater_snails_mwanza_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 4.524451,
|
| 78 |
+
"sentinel_datetime": "2025-09-10T08:20:59Z",
|
| 79 |
+
"sentinel_source": "sentinel-2c",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 54.0077,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 0.0,
|
| 91 |
+
"max": 0.0,
|
| 92 |
+
"mean": 0.0,
|
| 93 |
+
"median": 0.0,
|
| 94 |
+
"p90": 0.0
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 100663,
|
| 101 |
+
"min": 0.027,
|
| 102 |
+
"max": 15.6444,
|
| 103 |
+
"mean": 3.1279,
|
| 104 |
+
"median": 2.5782,
|
| 105 |
+
"p90": 6.5854
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 0,
|
| 122 |
+
"major_roads": 1,
|
| 123 |
+
"schools_waterpoints": 0,
|
| 124 |
+
"urban_landuse": 767,
|
| 125 |
+
"water_surface": 0,
|
| 126 |
+
"waterways": 0
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 83,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0061_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
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|
|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "mwanza_schistosomiasis_s0061_label_positive_jitter",
|
| 6 |
+
"aoi_id": "mwanza_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Tanzania",
|
| 11 |
+
"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 32.89680637461042,
|
| 17 |
+
"lat": -2.5894573997368826
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
-2.611940439884851,
|
| 22 |
+
32.919312395660775,
|
| 23 |
+
-2.5669743595889143
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0061_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "d5d6d5b81681ffd19214ce32fea540b7e1f7cc30ce9335cbc052cd4c38b2ad09",
|
| 34 |
+
"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0061_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0061_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0061_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0061_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0061_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0061_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0061_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/mwanza_tanzania/mwanza_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/mwanza_tanzania/mwanza_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/mwanza_tanzania/osm_major_roads_mwanza.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/mwanza_tanzania/gbif_freshwater_snails_mwanza_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
+
"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 4.524451,
|
| 78 |
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"sentinel_datetime": "2025-09-10T08:20:59Z",
|
| 79 |
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"sentinel_source": "sentinel-2c",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 49.5008,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": 0.0,
|
| 91 |
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"max": 0.0,
|
| 92 |
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"mean": 0.0,
|
| 93 |
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"median": 0.0,
|
| 94 |
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"p90": 0.0
|
| 95 |
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},
|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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"valid_pixels": 0
|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 187519,
|
| 101 |
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"min": 0.0727,
|
| 102 |
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|
| 103 |
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"mean": 26.6516,
|
| 104 |
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"median": 25.1336,
|
| 105 |
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"p90": 52.2641
|
| 106 |
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},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
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},
|
| 120 |
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"osm_counts": {
|
| 121 |
+
"health_facilities": 4,
|
| 122 |
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"major_roads": 7,
|
| 123 |
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"schools_waterpoints": 19,
|
| 124 |
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"urban_landuse": 11059,
|
| 125 |
+
"water_surface": 0,
|
| 126 |
+
"waterways": 1
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 48,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0062_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
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"chip_id": "mwanza_schistosomiasis_s0062_label_positive_jitter",
|
| 6 |
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"aoi_id": "mwanza_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
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"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
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"country": "Tanzania",
|
| 11 |
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"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
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"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 32.929640633847924,
|
| 17 |
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"lat": -2.4129642628718644
|
| 18 |
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|
| 19 |
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"bbox": [
|
| 20 |
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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],
|
| 25 |
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"panel_order": [
|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
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"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
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"bottom_left: Mapbox satellite context",
|
| 29 |
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"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
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],
|
| 31 |
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"image_packet": {
|
| 32 |
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"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0062_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "8d3dfd6e7f59f4deac990f240d67109a6b8cc4157621ed0b89283d8fe60aca65",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
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"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0062_label_positive_jitter",
|
| 40 |
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"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0062_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
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"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0062_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0062_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0062_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
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"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0062_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
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"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0062_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
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"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/mwanza_tanzania/mwanza_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/mwanza_tanzania/mwanza_worldpop_2025_constrained_100m.tif",
|
| 50 |
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"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/mwanza_tanzania/osm_major_roads_mwanza.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
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|
| 67 |
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]
|
| 68 |
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}
|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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|
| 75 |
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|
| 76 |
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|
| 77 |
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|
| 78 |
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|
| 79 |
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|
| 80 |
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|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
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| 82 |
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|
| 83 |
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|
| 84 |
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| 85 |
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| 86 |
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| 87 |
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| 88 |
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| 89 |
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| 90 |
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| 92 |
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| 93 |
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| 94 |
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| 95 |
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| 97 |
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| 98 |
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| 100 |
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| 101 |
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| 102 |
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| 103 |
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| 104 |
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|
| 105 |
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| 106 |
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| 107 |
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|
| 108 |
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|
| 109 |
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|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
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|
| 112 |
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|
| 113 |
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"jrc_gsw_transitions": {
|
| 114 |
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|
| 115 |
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|
| 116 |
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|
| 117 |
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|
| 118 |
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|
| 119 |
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|
| 120 |
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|
| 121 |
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|
| 122 |
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|
| 123 |
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|
| 124 |
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|
| 125 |
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|
| 126 |
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|
| 127 |
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},
|
| 128 |
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|
| 129 |
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|
| 130 |
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|
| 131 |
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|
| 132 |
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|
| 133 |
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}
|
| 134 |
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},
|
| 135 |
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"label_quality": {
|
| 136 |
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"tier": "weak_label_positive",
|
| 137 |
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"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
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},
|
| 139 |
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"license_flags": {
|
| 140 |
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"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
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},
|
| 145 |
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"sampling": {
|
| 146 |
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"sample_type": "label_positive_jitter",
|
| 147 |
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"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0063_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "mwanza_schistosomiasis_s0063_label_positive_jitter",
|
| 6 |
+
"aoi_id": "mwanza_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Tanzania",
|
| 11 |
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"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
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"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 32.827095344237236,
|
| 17 |
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"lat": -2.6731647737855493
|
| 18 |
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},
|
| 19 |
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"bbox": [
|
| 20 |
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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],
|
| 25 |
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"panel_order": [
|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0063_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "db1b64390434637416e27ce1f273ecaee05f6a36fcb37680c572f0fc147c82bc",
|
| 34 |
+
"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0063_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0063_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0063_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0063_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0063_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0063_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0063_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/mwanza_tanzania/mwanza_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/mwanza_tanzania/mwanza_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/mwanza_tanzania/osm_major_roads_mwanza.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/mwanza_tanzania/gbif_freshwater_snails_mwanza_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 4.524451,
|
| 78 |
+
"sentinel_datetime": "2025-09-10T08:20:59Z",
|
| 79 |
+
"sentinel_source": "sentinel-2c",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 56.0389,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 0.0,
|
| 91 |
+
"max": 0.0,
|
| 92 |
+
"mean": 0.0,
|
| 93 |
+
"median": 0.0,
|
| 94 |
+
"p90": 0.0
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 74323,
|
| 101 |
+
"min": 0.027,
|
| 102 |
+
"max": 15.6126,
|
| 103 |
+
"mean": 3.0557,
|
| 104 |
+
"median": 2.4314,
|
| 105 |
+
"p90": 6.4943
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 0,
|
| 122 |
+
"major_roads": 0,
|
| 123 |
+
"schools_waterpoints": 0,
|
| 124 |
+
"urban_landuse": 512,
|
| 125 |
+
"water_surface": 0,
|
| 126 |
+
"waterways": 0
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 85,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0064_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
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|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "mwanza_schistosomiasis_s0064_label_positive_jitter",
|
| 6 |
+
"aoi_id": "mwanza_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Tanzania",
|
| 11 |
+
"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 32.8349028915285,
|
| 17 |
+
"lat": -2.667016474376515
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
32.85741031109959,
|
| 23 |
+
-2.6445334342285465
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0064_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "61760a52ee44e129b7889d728364c077e7892813c26a0d3c9a01a6afb0ac979b",
|
| 34 |
+
"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0064_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0064_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0064_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0064_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0064_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0064_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0064_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/mwanza_tanzania/mwanza_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/mwanza_tanzania/mwanza_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/mwanza_tanzania/osm_major_roads_mwanza.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/mwanza_tanzania/gbif_freshwater_snails_mwanza_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
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},
|
| 70 |
+
"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 4.524451,
|
| 78 |
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"sentinel_datetime": "2025-09-10T08:20:59Z",
|
| 79 |
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"sentinel_source": "sentinel-2c",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 49.7321,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": 0.0,
|
| 91 |
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"max": 0.0,
|
| 92 |
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"mean": 0.0,
|
| 93 |
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"median": 0.0,
|
| 94 |
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"p90": 0.0
|
| 95 |
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},
|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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"valid_pixels": 0
|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 54176,
|
| 101 |
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"min": 0.027,
|
| 102 |
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"max": 13.5113,
|
| 103 |
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|
| 104 |
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"median": 2.3191,
|
| 105 |
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"p90": 5.856
|
| 106 |
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},
|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
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"osm_counts": {
|
| 121 |
+
"health_facilities": 0,
|
| 122 |
+
"major_roads": 0,
|
| 123 |
+
"schools_waterpoints": 0,
|
| 124 |
+
"urban_landuse": 293,
|
| 125 |
+
"water_surface": 0,
|
| 126 |
+
"waterways": 0
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 85,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0065_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
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"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
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"chip_id": "mwanza_schistosomiasis_s0065_label_positive_jitter",
|
| 6 |
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"aoi_id": "mwanza_schistosomiasis",
|
| 7 |
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"split": "train",
|
| 8 |
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"disease_module": "schistosomiasis",
|
| 9 |
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"primary_disease": "schistosomiasis",
|
| 10 |
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"country": "Tanzania",
|
| 11 |
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"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
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"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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|
| 17 |
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"lat": -2.5255837047122234
|
| 18 |
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|
| 19 |
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|
| 20 |
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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],
|
| 25 |
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"panel_order": [
|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
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"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
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"bottom_left: Mapbox satellite context",
|
| 29 |
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"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
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],
|
| 31 |
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"image_packet": {
|
| 32 |
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"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0065_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "a6291ca3cbc122399759e6091b8e1b2a283f8d348052674406fbae51334f0f49",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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|
| 37 |
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"source_assets": {
|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
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"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0065_label_positive_jitter",
|
| 40 |
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"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0065_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
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"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0065_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0065_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0065_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
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"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0065_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
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"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0065_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
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"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/mwanza_tanzania/mwanza_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/mwanza_tanzania/mwanza_worldpop_2025_constrained_100m.tif",
|
| 50 |
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"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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|
| 57 |
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"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
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|
| 59 |
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"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
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|
| 67 |
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]
|
| 68 |
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}
|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
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| 71 |
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|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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|
| 75 |
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|
| 76 |
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| 77 |
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|
| 78 |
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|
| 79 |
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| 80 |
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|
| 81 |
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| 82 |
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|
| 83 |
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| 84 |
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| 85 |
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| 86 |
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| 87 |
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| 88 |
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| 90 |
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| 91 |
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| 92 |
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| 94 |
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| 95 |
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| 97 |
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| 98 |
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| 99 |
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| 100 |
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| 101 |
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|
| 102 |
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| 103 |
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|
| 104 |
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|
| 105 |
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| 106 |
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| 107 |
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|
| 108 |
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|
| 109 |
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|
| 110 |
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|
| 111 |
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|
| 112 |
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|
| 113 |
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"jrc_gsw_transitions": {
|
| 114 |
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|
| 115 |
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|
| 116 |
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|
| 117 |
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|
| 118 |
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|
| 119 |
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|
| 120 |
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|
| 121 |
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|
| 122 |
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|
| 123 |
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|
| 124 |
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|
| 125 |
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|
| 126 |
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|
| 127 |
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},
|
| 128 |
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|
| 129 |
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|
| 130 |
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|
| 131 |
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|
| 132 |
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|
| 133 |
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}
|
| 134 |
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},
|
| 135 |
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"label_quality": {
|
| 136 |
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"tier": "weak_label_positive",
|
| 137 |
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"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
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},
|
| 139 |
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|
| 140 |
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|
| 141 |
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|
| 142 |
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|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
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},
|
| 145 |
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"sampling": {
|
| 146 |
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"sample_type": "label_positive_jitter",
|
| 147 |
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"sampler_version": "stratified-v0.1"
|
| 148 |
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}
|
| 149 |
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}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0068_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
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"chip_id": "mwanza_schistosomiasis_s0068_label_positive_jitter",
|
| 6 |
+
"aoi_id": "mwanza_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
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"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
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"country": "Tanzania",
|
| 11 |
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"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
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"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 32.89401707513848,
|
| 17 |
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"lat": -2.589141598503994
|
| 18 |
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},
|
| 19 |
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"bbox": [
|
| 20 |
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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],
|
| 25 |
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"panel_order": [
|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
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"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0068_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "85678057fd78a08209761f1dcde85e8197922af3b275fcefe21e9ded09deabac",
|
| 34 |
+
"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0068_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0068_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0068_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0068_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0068_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0068_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0068_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/mwanza_tanzania/mwanza_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/mwanza_tanzania/mwanza_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/mwanza_tanzania/osm_major_roads_mwanza.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/mwanza_tanzania/gbif_freshwater_snails_mwanza_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 4.524451,
|
| 78 |
+
"sentinel_datetime": "2025-09-10T08:20:59Z",
|
| 79 |
+
"sentinel_source": "sentinel-2c",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 48.7508,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 0.0,
|
| 91 |
+
"max": 0.0,
|
| 92 |
+
"mean": 0.0,
|
| 93 |
+
"median": 0.0,
|
| 94 |
+
"p90": 0.0
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 173864,
|
| 101 |
+
"min": 0.0727,
|
| 102 |
+
"max": 60.7358,
|
| 103 |
+
"mean": 24.2716,
|
| 104 |
+
"median": 21.295,
|
| 105 |
+
"p90": 50.1493
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 3,
|
| 122 |
+
"major_roads": 5,
|
| 123 |
+
"schools_waterpoints": 19,
|
| 124 |
+
"urban_landuse": 8957,
|
| 125 |
+
"water_surface": 0,
|
| 126 |
+
"waterways": 1
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 48,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0069_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
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|
|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "mwanza_schistosomiasis_s0069_label_positive_jitter",
|
| 6 |
+
"aoi_id": "mwanza_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Tanzania",
|
| 11 |
+
"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 32.74165652796426,
|
| 17 |
+
"lat": -2.5244503096989197
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
-2.546933349846888,
|
| 22 |
+
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|
| 23 |
+
-2.5019672695509514
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0069_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "45c5b403ff95df0ca084b614574a2c6b87decf8cd14c08627af2d78e539b9f05",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0069_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0069_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
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"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0069_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0069_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0069_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0069_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
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"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0069_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/mwanza_tanzania/mwanza_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/mwanza_tanzania/mwanza_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/mwanza_tanzania/osm_major_roads_mwanza.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
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"data/raw/map_gbif/mwanza_tanzania/gbif_freshwater_snails_mwanza_occurrences.csv"
|
| 67 |
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]
|
| 68 |
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}
|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 4.524451,
|
| 78 |
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"sentinel_datetime": "2025-09-10T08:20:59Z",
|
| 79 |
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"sentinel_source": "sentinel-2c",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 53.3256,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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|
| 90 |
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"min": 0.0,
|
| 91 |
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|
| 92 |
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|
| 93 |
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|
| 94 |
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"p90": 0.0
|
| 95 |
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},
|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 64076,
|
| 101 |
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|
| 102 |
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|
| 103 |
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|
| 104 |
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|
| 105 |
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"p90": 8.7881
|
| 106 |
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},
|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
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"valid_pixels": 0
|
| 109 |
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},
|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
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},
|
| 113 |
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"jrc_gsw_transitions": {
|
| 114 |
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"valid_pixels": 0
|
| 115 |
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},
|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
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|
| 118 |
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|
| 119 |
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|
| 120 |
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|
| 121 |
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|
| 122 |
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|
| 123 |
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|
| 124 |
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|
| 125 |
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|
| 126 |
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|
| 127 |
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|
| 128 |
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"label_counts": {
|
| 129 |
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|
| 130 |
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|
| 131 |
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|
| 132 |
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|
| 133 |
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|
| 134 |
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},
|
| 135 |
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"label_quality": {
|
| 136 |
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"tier": "weak_label_positive",
|
| 137 |
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"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
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|
| 139 |
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"license_flags": {
|
| 140 |
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"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
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},
|
| 145 |
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"sampling": {
|
| 146 |
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"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0070_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
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|
| 1 |
+
{
|
| 2 |
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"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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|
| 4 |
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"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
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|
| 6 |
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|
| 7 |
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"split": "train",
|
| 8 |
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|
| 9 |
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|
| 10 |
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|
| 11 |
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|
| 12 |
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|
| 13 |
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|
| 14 |
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|
| 15 |
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| 16 |
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| 17 |
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| 18 |
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| 19 |
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| 20 |
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| 24 |
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| 25 |
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|
| 26 |
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|
| 27 |
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|
| 28 |
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|
| 29 |
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|
| 30 |
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],
|
| 31 |
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"image_packet": {
|
| 32 |
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"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0070_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "d1df8c19c727ed4c163fe07a8824c234a631363e397df287bd2bbcff83f47b43",
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| 34 |
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|
| 35 |
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| 36 |
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| 37 |
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|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
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|
| 40 |
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|
| 41 |
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"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0070_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
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"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0070_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
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"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0070_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
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"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0070_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
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"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0070_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
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|
| 47 |
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|
| 48 |
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|
| 49 |
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"population_worldpop": "data/raw/worldpop/mwanza_tanzania/mwanza_worldpop_2025_constrained_100m.tif",
|
| 50 |
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|
| 51 |
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"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
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| 52 |
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| 53 |
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| 54 |
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|
| 55 |
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| 56 |
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|
| 57 |
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| 58 |
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| 59 |
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| 60 |
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|
| 61 |
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| 62 |
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| 63 |
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| 64 |
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| 65 |
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| 66 |
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| 67 |
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|
| 68 |
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|
| 69 |
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| 70 |
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| 71 |
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| 72 |
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| 73 |
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| 74 |
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| 75 |
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| 76 |
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| 77 |
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| 78 |
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| 79 |
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| 80 |
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| 81 |
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| 82 |
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| 83 |
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| 108 |
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|
| 114 |
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| 115 |
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|
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|
| 126 |
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|
| 127 |
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|
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|
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|
| 132 |
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|
| 133 |
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|
| 134 |
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|
| 135 |
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|
| 136 |
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|
| 137 |
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| 138 |
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|
| 139 |
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|
| 140 |
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|
| 141 |
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|
| 142 |
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|
| 143 |
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|
| 144 |
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|
| 145 |
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|
| 146 |
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|
| 147 |
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|
| 148 |
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}
|
| 149 |
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}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0071_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
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|
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|
|
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|
|
|
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|
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|
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|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
|
|
|
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|
|
|
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|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
|
|
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|
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|
|
|
|
|
|
|
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|
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|
|
|
|
|
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|
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|
|
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|
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|
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|
|
|
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|
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|
|
|
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|
|
|
|
|
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|
|
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|
|
|
|
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|
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|
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|
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|
|
|
|
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|
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|
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|
|
|
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|
|
|
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|
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|
|
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|
|
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|
|
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|
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|
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|
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|
|
|
|
|
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|
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|
|
|
|
|
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|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
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"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
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"chip_id": "mwanza_schistosomiasis_s0071_label_positive_jitter",
|
| 6 |
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"aoi_id": "mwanza_schistosomiasis",
|
| 7 |
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"split": "train",
|
| 8 |
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"disease_module": "schistosomiasis",
|
| 9 |
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"primary_disease": "schistosomiasis",
|
| 10 |
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"country": "Tanzania",
|
| 11 |
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"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
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"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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|
| 14 |
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|
| 15 |
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|
| 16 |
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|
| 17 |
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|
| 18 |
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},
|
| 19 |
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| 20 |
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| 21 |
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|
| 22 |
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|
| 23 |
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| 24 |
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|
| 25 |
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"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0071_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "1141123adeccff730525695f6b8d8d97f9c28803dfb64095cd02939f0033eb9d",
|
| 34 |
+
"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0071_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0071_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
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"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0071_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0071_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0071_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0071_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0071_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/mwanza_tanzania/mwanza_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/mwanza_tanzania/mwanza_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/mwanza_tanzania/osm_major_roads_mwanza.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/mwanza_tanzania/gbif_freshwater_snails_mwanza_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 4.524451,
|
| 78 |
+
"sentinel_datetime": "2025-09-10T08:20:59Z",
|
| 79 |
+
"sentinel_source": "sentinel-2c",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 50.9673,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 0.0,
|
| 91 |
+
"max": 0.0,
|
| 92 |
+
"mean": 0.0,
|
| 93 |
+
"median": 0.0,
|
| 94 |
+
"p90": 0.0
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 198611,
|
| 101 |
+
"min": 0.0727,
|
| 102 |
+
"max": 63.0626,
|
| 103 |
+
"mean": 27.2436,
|
| 104 |
+
"median": 26.9788,
|
| 105 |
+
"p90": 51.7263
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
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},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 5,
|
| 122 |
+
"major_roads": 7,
|
| 123 |
+
"schools_waterpoints": 19,
|
| 124 |
+
"urban_landuse": 11313,
|
| 125 |
+
"water_surface": 5,
|
| 126 |
+
"waterways": 1
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 48,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0073_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "mwanza_schistosomiasis_s0073_label_positive_jitter",
|
| 6 |
+
"aoi_id": "mwanza_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Tanzania",
|
| 11 |
+
"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
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"lon": 32.75015206793655,
|
| 17 |
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"lat": -2.5286808324336505
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
-2.506197792285682
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0073_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "8721493eea3a902e31d9f1976a53dced4f3dc18e7f402fda79e1b2325d841cdf",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0073_label_positive_jitter",
|
| 40 |
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"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0073_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
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"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0073_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0073_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0073_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
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"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0073_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0073_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/mwanza_tanzania/mwanza_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/mwanza_tanzania/mwanza_worldpop_2025_constrained_100m.tif",
|
| 50 |
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"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/mwanza_tanzania/osm_major_roads_mwanza.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
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"data/raw/map_gbif/mwanza_tanzania/gbif_freshwater_snails_mwanza_occurrences.csv"
|
| 67 |
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]
|
| 68 |
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}
|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 4.524451,
|
| 78 |
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"sentinel_datetime": "2025-09-10T08:20:59Z",
|
| 79 |
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"sentinel_source": "sentinel-2c",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 56.1096,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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|
| 91 |
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|
| 92 |
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|
| 93 |
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"median": 0.0,
|
| 94 |
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"p90": 0.0
|
| 95 |
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|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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|
| 101 |
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|
| 102 |
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|
| 103 |
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|
| 104 |
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|
| 105 |
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"p90": 7.85
|
| 106 |
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},
|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
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"valid_pixels": 0
|
| 109 |
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},
|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
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"valid_pixels": 0
|
| 112 |
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},
|
| 113 |
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"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
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},
|
| 120 |
+
"osm_counts": {
|
| 121 |
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"health_facilities": 0,
|
| 122 |
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"major_roads": 2,
|
| 123 |
+
"schools_waterpoints": 1,
|
| 124 |
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"urban_landuse": 715,
|
| 125 |
+
"water_surface": 3,
|
| 126 |
+
"waterways": 0
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
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"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 48,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
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}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0076_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
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|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
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|
|
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|
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|
|
|
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|
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|
|
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|
|
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|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
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"chip_id": "mwanza_schistosomiasis_s0076_label_positive_jitter",
|
| 6 |
+
"aoi_id": "mwanza_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
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"disease_module": "schistosomiasis",
|
| 9 |
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"primary_disease": "schistosomiasis",
|
| 10 |
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"country": "Tanzania",
|
| 11 |
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"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
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"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 32.77565347035922,
|
| 17 |
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"lat": -2.494148566145028
|
| 18 |
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|
| 19 |
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"bbox": [
|
| 20 |
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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],
|
| 25 |
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"panel_order": [
|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
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"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
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"bottom_left: Mapbox satellite context",
|
| 29 |
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"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
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],
|
| 31 |
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"image_packet": {
|
| 32 |
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"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0076_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "5e44acfb500ed70159da5fbc293e8603fad199be9cb814997c6e542a2d5e1076",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
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"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0076_label_positive_jitter",
|
| 40 |
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"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0076_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
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"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0076_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0076_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0076_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
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"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0076_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
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"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0076_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
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"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/mwanza_tanzania/mwanza_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/mwanza_tanzania/mwanza_worldpop_2025_constrained_100m.tif",
|
| 50 |
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"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
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|
| 59 |
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"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
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|
| 67 |
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]
|
| 68 |
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}
|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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|
| 75 |
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|
| 76 |
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|
| 77 |
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|
| 78 |
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|
| 79 |
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|
| 80 |
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|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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|
| 83 |
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|
| 84 |
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| 85 |
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| 86 |
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| 87 |
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| 88 |
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| 89 |
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| 90 |
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| 91 |
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| 92 |
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| 93 |
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| 94 |
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| 95 |
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| 96 |
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| 97 |
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| 98 |
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| 99 |
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|
| 100 |
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| 101 |
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| 102 |
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|
| 103 |
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|
| 104 |
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|
| 105 |
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|
| 106 |
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| 107 |
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|
| 108 |
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|
| 109 |
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|
| 110 |
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|
| 111 |
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|
| 112 |
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|
| 113 |
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"jrc_gsw_transitions": {
|
| 114 |
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|
| 115 |
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|
| 116 |
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|
| 117 |
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|
| 118 |
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|
| 119 |
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},
|
| 120 |
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|
| 121 |
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|
| 122 |
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|
| 123 |
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|
| 124 |
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|
| 125 |
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|
| 126 |
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|
| 127 |
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},
|
| 128 |
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|
| 129 |
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|
| 130 |
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|
| 131 |
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|
| 132 |
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|
| 133 |
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}
|
| 134 |
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},
|
| 135 |
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"label_quality": {
|
| 136 |
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"tier": "weak_label_positive",
|
| 137 |
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"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
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},
|
| 139 |
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"license_flags": {
|
| 140 |
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"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
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},
|
| 145 |
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"sampling": {
|
| 146 |
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"sample_type": "label_positive_jitter",
|
| 147 |
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"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0077_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "mwanza_schistosomiasis_s0077_label_positive_jitter",
|
| 6 |
+
"aoi_id": "mwanza_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Tanzania",
|
| 11 |
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"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
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"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 32.916587796153784,
|
| 17 |
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"lat": -2.4167924064331334
|
| 18 |
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},
|
| 19 |
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"bbox": [
|
| 20 |
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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| 25 |
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| 26 |
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|
| 27 |
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|
| 28 |
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"bottom_left: Mapbox satellite context",
|
| 29 |
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"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
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"image_packet": {
|
| 32 |
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"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0077_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "29f359b55d8938f9230406f1d3868939461ab44127521cdfdf85a474702616fe",
|
| 34 |
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|
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|
| 36 |
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|
| 37 |
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|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
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"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0077_label_positive_jitter",
|
| 40 |
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"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0077_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
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"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0077_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
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"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0077_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0077_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
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"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0077_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
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"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0077_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
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|
| 47 |
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|
| 48 |
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|
| 49 |
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|
| 50 |
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"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
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|
| 56 |
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|
| 57 |
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"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/mwanza_tanzania/osm_major_roads_mwanza.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
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"data/raw/map_gbif/mwanza_tanzania/gbif_freshwater_snails_mwanza_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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|
| 78 |
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"sentinel_datetime": "2025-09-10T08:20:59Z",
|
| 79 |
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"sentinel_source": "sentinel-2c",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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|
| 83 |
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"packet_std": 43.0788,
|
| 84 |
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|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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|
| 88 |
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|
| 89 |
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|
| 90 |
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|
| 91 |
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|
| 92 |
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|
| 93 |
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"median": 0.0,
|
| 94 |
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"p90": 0.0
|
| 95 |
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},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
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"valid_pixels": 0
|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 59044,
|
| 101 |
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|
| 102 |
+
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|
| 103 |
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|
| 104 |
+
"median": 6.1454,
|
| 105 |
+
"p90": 32.8443
|
| 106 |
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},
|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
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"valid_pixels": 0
|
| 109 |
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},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
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"valid_pixels": 0
|
| 118 |
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}
|
| 119 |
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},
|
| 120 |
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"osm_counts": {
|
| 121 |
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|
| 122 |
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"major_roads": 1,
|
| 123 |
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"schools_waterpoints": 2,
|
| 124 |
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|
| 125 |
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|
| 126 |
+
"waterways": 8
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
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|
| 131 |
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"intermediate_host_label": 53,
|
| 132 |
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|
| 133 |
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}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0078_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "mwanza_schistosomiasis_s0078_label_positive_jitter",
|
| 6 |
+
"aoi_id": "mwanza_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Tanzania",
|
| 11 |
+
"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 32.78694496227439,
|
| 17 |
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"lat": -2.4947433867513236
|
| 18 |
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},
|
| 19 |
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"bbox": [
|
| 20 |
+
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|
| 21 |
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|
| 22 |
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|
| 23 |
+
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|
| 24 |
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],
|
| 25 |
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"panel_order": [
|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
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|
| 28 |
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"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0078_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "1fccaf14dd2cf890117b72058b9cf664aa2b596b49798e8c17c85dc6b175f005",
|
| 34 |
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"width": 1024,
|
| 35 |
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|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
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"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0078_label_positive_jitter",
|
| 40 |
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"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0078_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
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"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0078_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
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"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0078_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0078_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
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"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0078_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
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"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0078_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
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"source_layers": {
|
| 47 |
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|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/mwanza_tanzania/mwanza_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/mwanza_tanzania/mwanza_worldpop_2025_constrained_100m.tif",
|
| 50 |
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"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/mwanza_tanzania/osm_major_roads_mwanza.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
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|
| 67 |
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]
|
| 68 |
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}
|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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|
| 76 |
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|
| 77 |
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"sentinel_cloud_cover_percent": 4.524451,
|
| 78 |
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"sentinel_datetime": "2025-09-10T08:20:59Z",
|
| 79 |
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"sentinel_source": "sentinel-2c",
|
| 80 |
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|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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|
| 84 |
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|
| 85 |
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|
| 86 |
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|
| 87 |
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|
| 88 |
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|
| 89 |
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|
| 90 |
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|
| 91 |
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| 92 |
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|
| 93 |
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|
| 94 |
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|
| 95 |
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|
| 96 |
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|
| 97 |
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|
| 98 |
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|
| 99 |
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|
| 100 |
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|
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|
| 102 |
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|
| 103 |
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|
| 104 |
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|
| 105 |
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|
| 106 |
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|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
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"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 0,
|
| 122 |
+
"major_roads": 0,
|
| 123 |
+
"schools_waterpoints": 1,
|
| 124 |
+
"urban_landuse": 987,
|
| 125 |
+
"water_surface": 1,
|
| 126 |
+
"waterways": 0
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 33,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/mwanza_schistosomiasis/mwanza_schistosomiasis_s0080_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
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|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "mwanza_schistosomiasis_s0080_label_positive_jitter",
|
| 6 |
+
"aoi_id": "mwanza_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Tanzania",
|
| 11 |
+
"name": "Mwanza city/lakeshore, Tanzania",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 32.82185378955989,
|
| 17 |
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"lat": -2.679884123266034
|
| 18 |
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},
|
| 19 |
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"bbox": [
|
| 20 |
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|
| 21 |
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|
| 22 |
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|
| 23 |
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-2.657401083118066
|
| 24 |
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],
|
| 25 |
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"panel_order": [
|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
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"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
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"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/mwanza_schistosomiasis/mwanza_schistosomiasis_s0080_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "5da38b939cde944a0d12b817b7b8957d15ab2416509a1cbe02d84304d120fada",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
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"simsat_raw_dir": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0080_label_positive_jitter",
|
| 40 |
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"sentinel_rgb": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0080_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0080_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0080_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0080_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0080_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
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"mapbox_metadata": "simsat_raw/mwanza_schistosomiasis/mwanza_schistosomiasis_s0080_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/mwanza_tanzania/mwanza_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/mwanza_tanzania/mwanza_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/mwanza_tanzania/mwanza_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/mwanza_tanzania/osm_health_facilities_mwanza.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/mwanza_tanzania/osm_major_roads_mwanza.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/mwanza_tanzania/osm_schools_waterpoints_mwanza.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/mwanza_tanzania/osm_urban_landuse_mwanza.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/mwanza_tanzania/osm_water_surface_mwanza.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/mwanza_tanzania/osm_waterways_mwanza.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
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"data/raw/map_gbif/mwanza_tanzania/gbif_freshwater_snails_mwanza_occurrences.csv"
|
| 67 |
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]
|
| 68 |
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}
|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/mwanza_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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|
| 77 |
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"sentinel_cloud_cover_percent": 4.524451,
|
| 78 |
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"sentinel_datetime": "2025-09-10T08:20:59Z",
|
| 79 |
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"sentinel_source": "sentinel-2c",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
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| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 56.6965,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
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|
| 86 |
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"numeric_features": {
|
| 87 |
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|
| 88 |
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| 89 |
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|
| 90 |
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|
| 91 |
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| 92 |
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| 93 |
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|
| 94 |
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"p90": 0.0
|
| 95 |
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|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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| 98 |
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| 99 |
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| 100 |
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|
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|
| 102 |
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| 103 |
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|
| 104 |
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|
| 105 |
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|
| 106 |
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| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
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|
| 109 |
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|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
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|
| 112 |
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|
| 113 |
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|
| 114 |
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|
| 115 |
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|
| 116 |
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|
| 117 |
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| 118 |
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|
| 119 |
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|
| 120 |
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|
| 121 |
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| 122 |
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| 123 |
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|
| 124 |
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|
| 125 |
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|
| 126 |
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| 127 |
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|
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| 129 |
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|
| 130 |
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|
| 131 |
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|
| 132 |
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|
| 133 |
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|
| 134 |
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},
|
| 135 |
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|
| 136 |
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|
| 137 |
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"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
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},
|
| 139 |
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|
| 140 |
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|
| 141 |
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|
| 142 |
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|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
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},
|
| 145 |
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"sampling": {
|
| 146 |
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"sample_type": "label_positive_jitter",
|
| 147 |
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|
| 148 |
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}
|
| 149 |
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}
|