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- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0001_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0004_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0006_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0007_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0012_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0013_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0014_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0015_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0016_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0018_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0019_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0020_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0022_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0023_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0024_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0025_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0026_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0028_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0029_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0030_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0031_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0032_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0036_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0037_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0039_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0041_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0042_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0043_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0044_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0045_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0047_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0048_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0049_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0050_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0051_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0053_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0056_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0057_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0058_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0060_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0061_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0065_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0066_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0067_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0072_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0073_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0074_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0075_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0077_label_positive_jitter_sidecar.json +149 -0
- sidecars/busia_schistosomiasis/busia_schistosomiasis_s0078_label_positive_jitter_sidecar.json +149 -0
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0001_label_positive_jitter_sidecar.json
ADDED
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@@ -0,0 +1,149 @@
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| 1 |
+
{
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| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
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| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
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| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
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| 5 |
+
"chip_id": "busia_schistosomiasis_s0001_label_positive_jitter",
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| 6 |
+
"aoi_id": "busia_schistosomiasis",
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| 7 |
+
"split": "train",
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| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Kenya",
|
| 11 |
+
"name": "Busia County, Kenya",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
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| 15 |
+
"center": {
|
| 16 |
+
"lon": 34.36993481880977,
|
| 17 |
+
"lat": 0.22427383408791157
|
| 18 |
+
},
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| 19 |
+
"bbox": [
|
| 20 |
+
34.34745160641952,
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| 21 |
+
0.2017907939399433,
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| 22 |
+
34.392418031200016,
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| 23 |
+
0.24675687423587983
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| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/busia_schistosomiasis/busia_schistosomiasis_s0001_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "274a5308f98d1ce98057a13462cc9e5d5256e31d2fc900572bf44eb5cb6c92c3",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0001_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0001_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0001_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0001_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0001_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0001_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0001_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/busia_kenya/busia_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/busia_kenya/busia_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/busia_kenya/busia_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/busia_kenya/busia_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/busia_kenya/busia_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/busia_kenya/busia_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/busia_kenya/osm_health_facilities_busia.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/busia_kenya/osm_major_roads_busia.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/busia_kenya/osm_schools_waterpoints_busia.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/busia_kenya/osm_urban_landuse_busia.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/busia_kenya/osm_water_surface_busia.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/busia_kenya/osm_waterways_busia.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/busia_kenya/gbif_freshwater_snails_busia_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 0.531272,
|
| 78 |
+
"sentinel_datetime": "2025-12-08T08:10:14Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 61.8738,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 8.0424,
|
| 91 |
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"max": 9.4312,
|
| 92 |
+
"mean": 8.6244,
|
| 93 |
+
"median": 8.5948,
|
| 94 |
+
"p90": 9.0247
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 261522,
|
| 101 |
+
"min": 0.0001,
|
| 102 |
+
"max": 19.8401,
|
| 103 |
+
"mean": 2.4196,
|
| 104 |
+
"median": 1.5696,
|
| 105 |
+
"p90": 5.2324
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 0,
|
| 122 |
+
"major_roads": 134,
|
| 123 |
+
"schools_waterpoints": 0,
|
| 124 |
+
"urban_landuse": 807,
|
| 125 |
+
"water_surface": 0,
|
| 126 |
+
"waterways": 0
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 18,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
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sidecars/busia_schistosomiasis/busia_schistosomiasis_s0004_label_positive_jitter_sidecar.json
ADDED
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|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
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"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "busia_schistosomiasis_s0004_label_positive_jitter",
|
| 6 |
+
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|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Kenya",
|
| 11 |
+
"name": "Busia County, Kenya",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
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|
| 14 |
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"pixels": 512,
|
| 15 |
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|
| 16 |
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|
| 17 |
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|
| 18 |
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|
| 19 |
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|
| 20 |
+
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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|
| 25 |
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|
| 26 |
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|
| 27 |
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|
| 28 |
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"bottom_left: Mapbox satellite context",
|
| 29 |
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"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/busia_schistosomiasis/busia_schistosomiasis_s0004_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "d46f356d55da95edb14e460eac215be75f6d8f6bc5754676eb01a90a7269793b",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
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"simsat_raw_dir": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0004_label_positive_jitter",
|
| 40 |
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"sentinel_rgb": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0004_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0004_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0004_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0004_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0004_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
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"mapbox_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0004_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
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"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/busia_kenya/busia_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/busia_kenya/busia_worldpop_2025_constrained_100m.tif",
|
| 50 |
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"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/busia_kenya/busia_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/busia_kenya/busia_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/busia_kenya/busia_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/busia_kenya/busia_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/busia_kenya/osm_health_facilities_busia.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/busia_kenya/osm_major_roads_busia.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/busia_kenya/osm_schools_waterpoints_busia.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/busia_kenya/osm_urban_landuse_busia.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/busia_kenya/osm_water_surface_busia.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/busia_kenya/osm_waterways_busia.overpass.json"
|
| 63 |
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},
|
| 64 |
+
"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/busia_kenya/gbif_freshwater_snails_busia_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
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"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 0.531272,
|
| 78 |
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"sentinel_datetime": "2025-12-08T08:10:14Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 62.0176,
|
| 84 |
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|
| 85 |
+
},
|
| 86 |
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"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
+
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|
| 90 |
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"min": 8.0429,
|
| 91 |
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"max": 9.6218,
|
| 92 |
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"mean": 8.7508,
|
| 93 |
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"median": 8.7389,
|
| 94 |
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"p90": 9.2834
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 261342,
|
| 101 |
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|
| 102 |
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|
| 103 |
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|
| 104 |
+
"median": 1.6106,
|
| 105 |
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"p90": 6.0201
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
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|
| 121 |
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|
| 122 |
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"major_roads": 140,
|
| 123 |
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|
| 124 |
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"urban_landuse": 907,
|
| 125 |
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|
| 126 |
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|
| 127 |
+
},
|
| 128 |
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"label_counts": {
|
| 129 |
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"vector_label": 0,
|
| 130 |
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"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 18,
|
| 132 |
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"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
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},
|
| 139 |
+
"license_flags": {
|
| 140 |
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"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
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},
|
| 145 |
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"sampling": {
|
| 146 |
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"sample_type": "label_positive_jitter",
|
| 147 |
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"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0006_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "busia_schistosomiasis_s0006_label_positive_jitter",
|
| 6 |
+
"aoi_id": "busia_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Kenya",
|
| 11 |
+
"name": "Busia County, Kenya",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 34.35907079168194,
|
| 17 |
+
"lat": 0.2051225039672972
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
0.22760554411526546
|
| 24 |
+
],
|
| 25 |
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"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
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"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/busia_schistosomiasis/busia_schistosomiasis_s0006_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "86a2961c324b83f7270d128797f267996788f80f6794304094cbb79cdacb3086",
|
| 34 |
+
"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0006_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0006_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0006_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0006_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0006_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0006_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0006_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/busia_kenya/busia_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/busia_kenya/busia_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/busia_kenya/busia_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/busia_kenya/busia_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/busia_kenya/busia_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/busia_kenya/busia_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/busia_kenya/osm_health_facilities_busia.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/busia_kenya/osm_major_roads_busia.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/busia_kenya/osm_schools_waterpoints_busia.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/busia_kenya/osm_urban_landuse_busia.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/busia_kenya/osm_water_surface_busia.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/busia_kenya/osm_waterways_busia.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/busia_kenya/gbif_freshwater_snails_busia_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 0.531272,
|
| 78 |
+
"sentinel_datetime": "2025-12-08T08:10:14Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 62.4351,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 8.042,
|
| 91 |
+
"max": 9.9389,
|
| 92 |
+
"mean": 9.1782,
|
| 93 |
+
"median": 9.2213,
|
| 94 |
+
"p90": 9.7808
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 261883,
|
| 101 |
+
"min": 0.0002,
|
| 102 |
+
"max": 15.5841,
|
| 103 |
+
"mean": 2.7705,
|
| 104 |
+
"median": 1.7102,
|
| 105 |
+
"p90": 5.9876
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 0,
|
| 122 |
+
"major_roads": 147,
|
| 123 |
+
"schools_waterpoints": 0,
|
| 124 |
+
"urban_landuse": 661,
|
| 125 |
+
"water_surface": 0,
|
| 126 |
+
"waterways": 0
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 18,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0007_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "busia_schistosomiasis_s0007_label_positive_jitter",
|
| 6 |
+
"aoi_id": "busia_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Kenya",
|
| 11 |
+
"name": "Busia County, Kenya",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 34.36653760138491,
|
| 17 |
+
"lat": 0.21582987303416076
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
34.344054401720506,
|
| 21 |
+
0.1933468328861925,
|
| 22 |
+
34.38902080104932,
|
| 23 |
+
0.23831291318212902
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/busia_schistosomiasis/busia_schistosomiasis_s0007_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "891b63e2a5ea7ec09962d32c3d2c46a50ee035ecf70150734b01a35d19d80d92",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0007_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0007_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0007_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0007_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0007_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0007_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0007_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/busia_kenya/busia_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/busia_kenya/busia_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/busia_kenya/busia_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/busia_kenya/busia_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/busia_kenya/busia_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/busia_kenya/busia_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/busia_kenya/osm_health_facilities_busia.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/busia_kenya/osm_major_roads_busia.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/busia_kenya/osm_schools_waterpoints_busia.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/busia_kenya/osm_urban_landuse_busia.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/busia_kenya/osm_water_surface_busia.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/busia_kenya/osm_waterways_busia.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/busia_kenya/gbif_freshwater_snails_busia_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 0.531272,
|
| 78 |
+
"sentinel_datetime": "2025-12-08T08:10:14Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 62.1204,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 8.042,
|
| 91 |
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"max": 9.6783,
|
| 92 |
+
"mean": 8.8038,
|
| 93 |
+
"median": 8.8028,
|
| 94 |
+
"p90": 9.3644
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 261360,
|
| 101 |
+
"min": 0.0001,
|
| 102 |
+
"max": 17.9649,
|
| 103 |
+
"mean": 2.6247,
|
| 104 |
+
"median": 1.6146,
|
| 105 |
+
"p90": 5.8774
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 0,
|
| 122 |
+
"major_roads": 149,
|
| 123 |
+
"schools_waterpoints": 0,
|
| 124 |
+
"urban_landuse": 800,
|
| 125 |
+
"water_surface": 0,
|
| 126 |
+
"waterways": 0
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 18,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0012_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
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|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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|
| 4 |
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|
| 5 |
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|
| 6 |
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|
| 7 |
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|
| 8 |
+
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|
| 9 |
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|
| 10 |
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|
| 11 |
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"name": "Busia County, Kenya",
|
| 12 |
+
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|
| 13 |
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|
| 14 |
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|
| 15 |
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|
| 16 |
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| 17 |
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|
| 18 |
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| 19 |
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|
| 20 |
+
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|
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| 22 |
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|
| 23 |
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|
| 24 |
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| 25 |
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|
| 26 |
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|
| 27 |
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|
| 28 |
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|
| 29 |
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|
| 30 |
+
],
|
| 31 |
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"image_packet": {
|
| 32 |
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"path": "image_packets/busia_schistosomiasis/busia_schistosomiasis_s0012_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "ace714771d04e7c07209e221171694a8afd75121f59481e15127d1205c7f4861",
|
| 34 |
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|
| 35 |
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|
| 36 |
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|
| 37 |
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|
| 38 |
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|
| 39 |
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|
| 40 |
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|
| 41 |
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|
| 42 |
+
"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0012_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0012_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
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"mapbox_satellite": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0012_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
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"mapbox_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0012_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
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|
| 47 |
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|
| 48 |
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|
| 49 |
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"population_worldpop": "data/raw/worldpop/busia_kenya/busia_worldpop_2025_constrained_100m.tif",
|
| 50 |
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"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/busia_kenya/busia_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/busia_kenya/busia_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/busia_kenya/busia_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/busia_kenya/busia_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/busia_kenya/osm_health_facilities_busia.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/busia_kenya/osm_major_roads_busia.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/busia_kenya/osm_schools_waterpoints_busia.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/busia_kenya/osm_urban_landuse_busia.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/busia_kenya/osm_water_surface_busia.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/busia_kenya/osm_waterways_busia.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
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"data/raw/map_gbif/busia_kenya/gbif_freshwater_snails_busia_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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|
| 77 |
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"sentinel_cloud_cover_percent": 0.531272,
|
| 78 |
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"sentinel_datetime": "2025-12-08T08:10:14Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
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|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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|
| 83 |
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"packet_std": 62.5018,
|
| 84 |
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|
| 85 |
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|
| 86 |
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|
| 87 |
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|
| 88 |
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|
| 89 |
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|
| 90 |
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|
| 91 |
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|
| 92 |
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"mean": 8.9652,
|
| 93 |
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|
| 94 |
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"p90": 9.5681
|
| 95 |
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},
|
| 96 |
+
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|
| 97 |
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|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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|
| 101 |
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|
| 102 |
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|
| 103 |
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|
| 104 |
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"median": 1.6453,
|
| 105 |
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|
| 106 |
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|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
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|
| 109 |
+
},
|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
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|
| 112 |
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},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
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},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
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|
| 118 |
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}
|
| 119 |
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},
|
| 120 |
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|
| 121 |
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|
| 122 |
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|
| 123 |
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|
| 124 |
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|
| 125 |
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|
| 126 |
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|
| 127 |
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},
|
| 128 |
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"label_counts": {
|
| 129 |
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|
| 130 |
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|
| 131 |
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|
| 132 |
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|
| 133 |
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}
|
| 134 |
+
},
|
| 135 |
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"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
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"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
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},
|
| 139 |
+
"license_flags": {
|
| 140 |
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"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
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},
|
| 145 |
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"sampling": {
|
| 146 |
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"sample_type": "label_positive_jitter",
|
| 147 |
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"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0013_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "busia_schistosomiasis_s0013_label_positive_jitter",
|
| 6 |
+
"aoi_id": "busia_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Kenya",
|
| 11 |
+
"name": "Busia County, Kenya",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 34.364783945372245,
|
| 17 |
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"lat": 0.21504981881428897
|
| 18 |
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},
|
| 19 |
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"bbox": [
|
| 20 |
+
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|
| 21 |
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|
| 22 |
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|
| 23 |
+
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|
| 24 |
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],
|
| 25 |
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"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
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|
| 28 |
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"bottom_left: Mapbox satellite context",
|
| 29 |
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"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/busia_schistosomiasis/busia_schistosomiasis_s0013_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "3e9bc1de8df4b87d26368579260382122a361a75c88ac254cf8205a717507ca0",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0013_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0013_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0013_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
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"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0013_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0013_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0013_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0013_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
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"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/busia_kenya/busia_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/busia_kenya/busia_worldpop_2025_constrained_100m.tif",
|
| 50 |
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"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/busia_kenya/busia_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/busia_kenya/busia_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/busia_kenya/busia_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/busia_kenya/busia_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/busia_kenya/osm_health_facilities_busia.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/busia_kenya/osm_major_roads_busia.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/busia_kenya/osm_schools_waterpoints_busia.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/busia_kenya/osm_urban_landuse_busia.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/busia_kenya/osm_water_surface_busia.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/busia_kenya/osm_waterways_busia.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/busia_kenya/gbif_freshwater_snails_busia_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 0.531272,
|
| 78 |
+
"sentinel_datetime": "2025-12-08T08:10:14Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 62.1903,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 8.0422,
|
| 91 |
+
"max": 9.7094,
|
| 92 |
+
"mean": 8.8414,
|
| 93 |
+
"median": 8.852,
|
| 94 |
+
"p90": 9.4116
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 261427,
|
| 101 |
+
"min": 0.0001,
|
| 102 |
+
"max": 15.5809,
|
| 103 |
+
"mean": 2.5723,
|
| 104 |
+
"median": 1.5968,
|
| 105 |
+
"p90": 5.7211
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 0,
|
| 122 |
+
"major_roads": 156,
|
| 123 |
+
"schools_waterpoints": 0,
|
| 124 |
+
"urban_landuse": 659,
|
| 125 |
+
"water_surface": 0,
|
| 126 |
+
"waterways": 0
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 18,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0014_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "busia_schistosomiasis_s0014_label_positive_jitter",
|
| 6 |
+
"aoi_id": "busia_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Kenya",
|
| 11 |
+
"name": "Busia County, Kenya",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 34.36979529854578,
|
| 17 |
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"lat": 0.21641896421995407
|
| 18 |
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},
|
| 19 |
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"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
0.23890200436792233
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/busia_schistosomiasis/busia_schistosomiasis_s0014_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "39f5972df7a29b84263651061868445572e67dc05a0fdfe9fbdd8332a38d2a42",
|
| 34 |
+
"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0014_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0014_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0014_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0014_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0014_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0014_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0014_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/busia_kenya/busia_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/busia_kenya/busia_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/busia_kenya/busia_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/busia_kenya/busia_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/busia_kenya/busia_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/busia_kenya/busia_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/busia_kenya/osm_health_facilities_busia.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/busia_kenya/osm_major_roads_busia.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/busia_kenya/osm_schools_waterpoints_busia.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/busia_kenya/osm_urban_landuse_busia.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/busia_kenya/osm_water_surface_busia.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/busia_kenya/osm_waterways_busia.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/busia_kenya/gbif_freshwater_snails_busia_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
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},
|
| 70 |
+
"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 0.531272,
|
| 78 |
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"sentinel_datetime": "2025-12-08T08:10:14Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 61.9841,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": 8.0429,
|
| 91 |
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"max": 9.6381,
|
| 92 |
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"mean": 8.7586,
|
| 93 |
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"median": 8.7365,
|
| 94 |
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"p90": 9.3039
|
| 95 |
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},
|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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"valid_pixels": 0
|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 261522,
|
| 101 |
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"min": 0.0001,
|
| 102 |
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"max": 19.7408,
|
| 103 |
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"mean": 2.8193,
|
| 104 |
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"median": 1.6534,
|
| 105 |
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"p90": 6.5971
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
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"osm_counts": {
|
| 121 |
+
"health_facilities": 0,
|
| 122 |
+
"major_roads": 137,
|
| 123 |
+
"schools_waterpoints": 0,
|
| 124 |
+
"urban_landuse": 1142,
|
| 125 |
+
"water_surface": 0,
|
| 126 |
+
"waterways": 0
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 18,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0015_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "busia_schistosomiasis_s0015_label_positive_jitter",
|
| 6 |
+
"aoi_id": "busia_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Kenya",
|
| 11 |
+
"name": "Busia County, Kenya",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 34.20113397522242,
|
| 17 |
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|
| 18 |
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|
| 19 |
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|
| 20 |
+
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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| 25 |
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|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
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|
| 28 |
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"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/busia_schistosomiasis/busia_schistosomiasis_s0015_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "e73e889d5c75e42d3b7aa158abfd7ad8ed97e0ff0caea22269e8b4468030635d",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
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"simsat_raw_dir": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0015_label_positive_jitter",
|
| 40 |
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"sentinel_rgb": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0015_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0015_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0015_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0015_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0015_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
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"mapbox_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0015_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/busia_kenya/busia_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/busia_kenya/busia_worldpop_2025_constrained_100m.tif",
|
| 50 |
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"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/busia_kenya/busia_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/busia_kenya/busia_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/busia_kenya/busia_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/busia_kenya/busia_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/busia_kenya/osm_health_facilities_busia.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/busia_kenya/osm_major_roads_busia.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/busia_kenya/osm_schools_waterpoints_busia.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/busia_kenya/osm_urban_landuse_busia.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/busia_kenya/osm_water_surface_busia.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/busia_kenya/osm_waterways_busia.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/busia_kenya/gbif_freshwater_snails_busia_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
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"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 0.531272,
|
| 78 |
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"sentinel_datetime": "2025-12-08T08:10:14Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 60.8879,
|
| 84 |
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|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
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"min": 5.9081,
|
| 91 |
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"max": 7.5003,
|
| 92 |
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"mean": 6.5796,
|
| 93 |
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"median": 6.5059,
|
| 94 |
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"p90": 7.0582
|
| 95 |
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},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
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},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
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"valid_pixels": 251684,
|
| 101 |
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"min": 0.0001,
|
| 102 |
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"max": 20.9454,
|
| 103 |
+
"mean": 2.9511,
|
| 104 |
+
"median": 1.9039,
|
| 105 |
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"p90": 7.0408
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
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"osm_counts": {
|
| 121 |
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"health_facilities": 0,
|
| 122 |
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"major_roads": 25,
|
| 123 |
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"schools_waterpoints": 5,
|
| 124 |
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"urban_landuse": 5,
|
| 125 |
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|
| 126 |
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"waterways": 0
|
| 127 |
+
},
|
| 128 |
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"label_counts": {
|
| 129 |
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"vector_label": 0,
|
| 130 |
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"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 5,
|
| 132 |
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"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
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},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
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"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0016_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "busia_schistosomiasis_s0016_label_positive_jitter",
|
| 6 |
+
"aoi_id": "busia_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Kenya",
|
| 11 |
+
"name": "Busia County, Kenya",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 34.366146881518254,
|
| 17 |
+
"lat": 0.2168938511497408
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
0.23937689129770906
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/busia_schistosomiasis/busia_schistosomiasis_s0016_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "d7f1bc4dce023a0faeb526655f2aac925a3da6f784600d53c430a8d64d2e2af3",
|
| 34 |
+
"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0016_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0016_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0016_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0016_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0016_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0016_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0016_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/busia_kenya/busia_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/busia_kenya/busia_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/busia_kenya/busia_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/busia_kenya/busia_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/busia_kenya/busia_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/busia_kenya/busia_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/busia_kenya/osm_health_facilities_busia.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/busia_kenya/osm_major_roads_busia.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/busia_kenya/osm_schools_waterpoints_busia.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/busia_kenya/osm_urban_landuse_busia.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/busia_kenya/osm_water_surface_busia.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/busia_kenya/osm_waterways_busia.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/busia_kenya/gbif_freshwater_snails_busia_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 0.531272,
|
| 78 |
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"sentinel_datetime": "2025-12-08T08:10:14Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 62.0859,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
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},
|
| 86 |
+
"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
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"min": 8.0427,
|
| 91 |
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"max": 9.656,
|
| 92 |
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"mean": 8.786,
|
| 93 |
+
"median": 8.7867,
|
| 94 |
+
"p90": 9.333
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 261322,
|
| 101 |
+
"min": 0.0001,
|
| 102 |
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"max": 16.6791,
|
| 103 |
+
"mean": 2.5495,
|
| 104 |
+
"median": 1.5884,
|
| 105 |
+
"p90": 5.7092
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 0,
|
| 122 |
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"major_roads": 152,
|
| 123 |
+
"schools_waterpoints": 0,
|
| 124 |
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"urban_landuse": 745,
|
| 125 |
+
"water_surface": 0,
|
| 126 |
+
"waterways": 0
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 18,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0018_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "busia_schistosomiasis_s0018_label_positive_jitter",
|
| 6 |
+
"aoi_id": "busia_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Kenya",
|
| 11 |
+
"name": "Busia County, Kenya",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 34.37031581775424,
|
| 17 |
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"lat": 0.2064305919837774
|
| 18 |
+
},
|
| 19 |
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"bbox": [
|
| 20 |
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|
| 21 |
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|
| 22 |
+
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|
| 23 |
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|
| 24 |
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],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/busia_schistosomiasis/busia_schistosomiasis_s0018_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "5e91edfa176fdd19cb8cabee085dd105205caedfa6ad3699cf127ddbd32e9158",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0018_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0018_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0018_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0018_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0018_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0018_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0018_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/busia_kenya/busia_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/busia_kenya/busia_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/busia_kenya/busia_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/busia_kenya/busia_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/busia_kenya/busia_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/busia_kenya/busia_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/busia_kenya/osm_health_facilities_busia.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/busia_kenya/osm_major_roads_busia.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/busia_kenya/osm_schools_waterpoints_busia.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/busia_kenya/osm_urban_landuse_busia.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/busia_kenya/osm_water_surface_busia.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/busia_kenya/osm_waterways_busia.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/busia_kenya/gbif_freshwater_snails_busia_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 0.531272,
|
| 78 |
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"sentinel_datetime": "2025-12-08T08:10:14Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 62.2104,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": 8.042,
|
| 91 |
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"max": 9.8982,
|
| 92 |
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"mean": 9.0125,
|
| 93 |
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"median": 9.0142,
|
| 94 |
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"p90": 9.6528
|
| 95 |
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|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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"valid_pixels": 0
|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 261883,
|
| 101 |
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"min": 0.0002,
|
| 102 |
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"max": 20.2085,
|
| 103 |
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"mean": 3.1243,
|
| 104 |
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"median": 1.8305,
|
| 105 |
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"p90": 7.1764
|
| 106 |
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},
|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
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"osm_counts": {
|
| 121 |
+
"health_facilities": 0,
|
| 122 |
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"major_roads": 129,
|
| 123 |
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"schools_waterpoints": 0,
|
| 124 |
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"urban_landuse": 1416,
|
| 125 |
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"water_surface": 0,
|
| 126 |
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"waterways": 0
|
| 127 |
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},
|
| 128 |
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"label_counts": {
|
| 129 |
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"vector_label": 0,
|
| 130 |
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"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 18,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0019_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "busia_schistosomiasis_s0019_label_positive_jitter",
|
| 6 |
+
"aoi_id": "busia_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Kenya",
|
| 11 |
+
"name": "Busia County, Kenya",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
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|
| 17 |
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"lat": 0.21491659569105584
|
| 18 |
+
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|
| 19 |
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|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
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|
| 23 |
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|
| 24 |
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|
| 25 |
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"panel_order": [
|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
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|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/busia_schistosomiasis/busia_schistosomiasis_s0019_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "d5ddbed2daf4bdbe7c7313d07d7411d8b3537fd88b67d69927444c74b33d5bd6",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0019_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0019_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0019_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0019_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0019_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0019_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0019_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/busia_kenya/busia_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/busia_kenya/busia_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/busia_kenya/busia_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/busia_kenya/busia_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/busia_kenya/busia_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/busia_kenya/busia_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/busia_kenya/osm_health_facilities_busia.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/busia_kenya/osm_major_roads_busia.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/busia_kenya/osm_schools_waterpoints_busia.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/busia_kenya/osm_urban_landuse_busia.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/busia_kenya/osm_water_surface_busia.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/busia_kenya/osm_waterways_busia.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/busia_kenya/gbif_freshwater_snails_busia_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 0.531272,
|
| 78 |
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"sentinel_datetime": "2025-12-08T08:10:14Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 62.1982,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 8.0433,
|
| 91 |
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"max": 9.741,
|
| 92 |
+
"mean": 8.9002,
|
| 93 |
+
"median": 8.9345,
|
| 94 |
+
"p90": 9.4627
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 261363,
|
| 101 |
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"min": 0.0001,
|
| 102 |
+
"max": 15.5689,
|
| 103 |
+
"mean": 2.6074,
|
| 104 |
+
"median": 1.623,
|
| 105 |
+
"p90": 5.7503
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 0,
|
| 122 |
+
"major_roads": 160,
|
| 123 |
+
"schools_waterpoints": 0,
|
| 124 |
+
"urban_landuse": 579,
|
| 125 |
+
"water_surface": 0,
|
| 126 |
+
"waterways": 0
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 18,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0020_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "busia_schistosomiasis_s0020_label_positive_jitter",
|
| 6 |
+
"aoi_id": "busia_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Kenya",
|
| 11 |
+
"name": "Busia County, Kenya",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 34.36571197142848,
|
| 17 |
+
"lat": 0.2144661480962201
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
0.19198310794825185,
|
| 22 |
+
34.38819516908343,
|
| 23 |
+
0.23694918824418837
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/busia_schistosomiasis/busia_schistosomiasis_s0020_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "5836111982e17a421c96e9f47d0fd59d5e13a24db37aa12af940294239e3266f",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0020_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0020_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0020_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0020_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0020_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0020_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0020_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/busia_kenya/busia_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/busia_kenya/busia_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/busia_kenya/busia_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/busia_kenya/busia_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/busia_kenya/busia_gsw_transitions_v1_4_2021.tif",
|
| 54 |
+
"extent": "data/raw/jrc_gsw/busia_kenya/busia_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/busia_kenya/osm_health_facilities_busia.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/busia_kenya/osm_major_roads_busia.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/busia_kenya/osm_schools_waterpoints_busia.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/busia_kenya/osm_urban_landuse_busia.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/busia_kenya/osm_water_surface_busia.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/busia_kenya/osm_waterways_busia.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/busia_kenya/gbif_freshwater_snails_busia_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
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|
| 74 |
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|
| 75 |
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|
| 76 |
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|
| 77 |
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|
| 78 |
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"sentinel_datetime": "2025-12-08T08:10:14Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 62.2022,
|
| 84 |
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|
| 85 |
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|
| 86 |
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"numeric_features": {
|
| 87 |
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| 88 |
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|
| 89 |
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|
| 90 |
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|
| 91 |
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|
| 92 |
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|
| 93 |
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|
| 94 |
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"p90": 9.4205
|
| 95 |
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|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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|
| 98 |
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|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 261521,
|
| 101 |
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"min": 0.0001,
|
| 102 |
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"max": 15.5796,
|
| 103 |
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|
| 104 |
+
"median": 1.6217,
|
| 105 |
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"p90": 5.8161
|
| 106 |
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|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
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"valid_pixels": 0
|
| 109 |
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},
|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
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"valid_pixels": 0
|
| 112 |
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},
|
| 113 |
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"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
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},
|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
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|
| 118 |
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}
|
| 119 |
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},
|
| 120 |
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"osm_counts": {
|
| 121 |
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"health_facilities": 0,
|
| 122 |
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"major_roads": 154,
|
| 123 |
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"schools_waterpoints": 0,
|
| 124 |
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"urban_landuse": 745,
|
| 125 |
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"water_surface": 0,
|
| 126 |
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"waterways": 0
|
| 127 |
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},
|
| 128 |
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"label_counts": {
|
| 129 |
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"vector_label": 0,
|
| 130 |
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"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 18,
|
| 132 |
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"disease_aggregate": 0
|
| 133 |
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}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0022_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "busia_schistosomiasis_s0022_label_positive_jitter",
|
| 6 |
+
"aoi_id": "busia_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Kenya",
|
| 11 |
+
"name": "Busia County, Kenya",
|
| 12 |
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"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 34.36568770580376,
|
| 17 |
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"lat": 0.2179286337951457
|
| 18 |
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},
|
| 19 |
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"bbox": [
|
| 20 |
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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],
|
| 25 |
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"panel_order": [
|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/busia_schistosomiasis/busia_schistosomiasis_s0022_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "37e6c70698e8bd84ceac6d72e12516df9f708d43b1b035a9d65cb968a1714d77",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0022_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0022_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0022_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0022_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0022_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0022_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0022_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/busia_kenya/busia_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/busia_kenya/busia_worldpop_2025_constrained_100m.tif",
|
| 50 |
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"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/busia_kenya/busia_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/busia_kenya/busia_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/busia_kenya/busia_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/busia_kenya/busia_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/busia_kenya/osm_health_facilities_busia.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/busia_kenya/osm_major_roads_busia.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/busia_kenya/osm_schools_waterpoints_busia.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/busia_kenya/osm_urban_landuse_busia.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/busia_kenya/osm_water_surface_busia.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/busia_kenya/osm_waterways_busia.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
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"data/raw/map_gbif/busia_kenya/gbif_freshwater_snails_busia_occurrences.csv"
|
| 67 |
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]
|
| 68 |
+
}
|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 0.531272,
|
| 78 |
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"sentinel_datetime": "2025-12-08T08:10:14Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 62.0743,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": 8.0426,
|
| 91 |
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"max": 9.6356,
|
| 92 |
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"mean": 8.7709,
|
| 93 |
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"median": 8.7735,
|
| 94 |
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"p90": 9.304
|
| 95 |
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|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 261313,
|
| 101 |
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"min": 0.0001,
|
| 102 |
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"max": 15.5717,
|
| 103 |
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|
| 104 |
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"median": 1.5711,
|
| 105 |
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"p90": 5.4916
|
| 106 |
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},
|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
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"valid_pixels": 0
|
| 109 |
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},
|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
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"valid_pixels": 0
|
| 112 |
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},
|
| 113 |
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"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
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},
|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
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"valid_pixels": 0
|
| 118 |
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}
|
| 119 |
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},
|
| 120 |
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"osm_counts": {
|
| 121 |
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"health_facilities": 0,
|
| 122 |
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"major_roads": 156,
|
| 123 |
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|
| 124 |
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"urban_landuse": 705,
|
| 125 |
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"water_surface": 0,
|
| 126 |
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"waterways": 0
|
| 127 |
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},
|
| 128 |
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"label_counts": {
|
| 129 |
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"vector_label": 0,
|
| 130 |
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"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 18,
|
| 132 |
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"disease_aggregate": 0
|
| 133 |
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}
|
| 134 |
+
},
|
| 135 |
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"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0023_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
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|
|
|
|
|
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|
|
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|
|
|
|
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|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
|
|
|
|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
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"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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|
| 4 |
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|
| 5 |
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"chip_id": "busia_schistosomiasis_s0023_label_positive_jitter",
|
| 6 |
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|
| 7 |
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|
| 8 |
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|
| 9 |
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|
| 10 |
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|
| 11 |
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"name": "Busia County, Kenya",
|
| 12 |
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|
| 13 |
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|
| 14 |
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|
| 15 |
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| 16 |
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| 17 |
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| 18 |
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| 19 |
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| 20 |
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|
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|
| 24 |
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| 25 |
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| 26 |
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|
| 27 |
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|
| 28 |
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|
| 29 |
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|
| 30 |
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],
|
| 31 |
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"image_packet": {
|
| 32 |
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"path": "image_packets/busia_schistosomiasis/busia_schistosomiasis_s0023_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "16e17bcca3cdb9a52014412a7214020a9a2d2b717ec4b6077c043f3663724be8",
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| 34 |
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|
| 35 |
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|
| 36 |
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| 37 |
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|
| 38 |
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|
| 39 |
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|
| 40 |
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|
| 41 |
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|
| 42 |
+
"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0023_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0023_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
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"mapbox_satellite": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0023_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
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|
| 46 |
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|
| 47 |
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|
| 48 |
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|
| 49 |
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|
| 50 |
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|
| 51 |
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"occurrence": "data/raw/jrc_gsw/busia_kenya/busia_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/busia_kenya/busia_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/busia_kenya/busia_gsw_transitions_v1_4_2021.tif",
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| 54 |
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"extent": "data/raw/jrc_gsw/busia_kenya/busia_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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|
| 57 |
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"health_facilities": "data/raw/osm/busia_kenya/osm_health_facilities_busia.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/busia_kenya/osm_major_roads_busia.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/busia_kenya/osm_schools_waterpoints_busia.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/busia_kenya/osm_urban_landuse_busia.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/busia_kenya/osm_water_surface_busia.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/busia_kenya/osm_waterways_busia.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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|
| 66 |
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"data/raw/map_gbif/busia_kenya/gbif_freshwater_snails_busia_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
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}
|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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|
| 75 |
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|
| 76 |
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|
| 77 |
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|
| 78 |
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|
| 79 |
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|
| 80 |
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|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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|
| 83 |
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"packet_std": 62.3935,
|
| 84 |
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|
| 85 |
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|
| 86 |
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|
| 87 |
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|
| 88 |
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|
| 89 |
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|
| 90 |
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|
| 91 |
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|
| 92 |
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|
| 93 |
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|
| 94 |
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"p90": 9.889
|
| 95 |
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|
| 96 |
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|
| 97 |
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|
| 98 |
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},
|
| 99 |
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|
| 100 |
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|
| 101 |
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|
| 102 |
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|
| 103 |
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|
| 104 |
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|
| 105 |
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|
| 106 |
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|
| 107 |
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|
| 108 |
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|
| 109 |
+
},
|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
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|
| 112 |
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},
|
| 113 |
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"jrc_gsw_transitions": {
|
| 114 |
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"valid_pixels": 0
|
| 115 |
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},
|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
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"valid_pixels": 0
|
| 118 |
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|
| 119 |
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},
|
| 120 |
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|
| 121 |
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|
| 122 |
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|
| 123 |
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|
| 124 |
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|
| 125 |
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|
| 126 |
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|
| 127 |
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|
| 128 |
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"label_counts": {
|
| 129 |
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|
| 130 |
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|
| 131 |
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|
| 132 |
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|
| 133 |
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}
|
| 134 |
+
},
|
| 135 |
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"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
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"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
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},
|
| 139 |
+
"license_flags": {
|
| 140 |
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"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
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},
|
| 145 |
+
"sampling": {
|
| 146 |
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"sample_type": "label_positive_jitter",
|
| 147 |
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"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0024_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "busia_schistosomiasis_s0024_label_positive_jitter",
|
| 6 |
+
"aoi_id": "busia_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Kenya",
|
| 11 |
+
"name": "Busia County, Kenya",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 34.378764895842934,
|
| 17 |
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"lat": 0.21182842362365614
|
| 18 |
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},
|
| 19 |
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"bbox": [
|
| 20 |
+
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|
| 21 |
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|
| 22 |
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|
| 23 |
+
0.2343114637716244
|
| 24 |
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],
|
| 25 |
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"panel_order": [
|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
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|
| 28 |
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"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/busia_schistosomiasis/busia_schistosomiasis_s0024_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "e3e2a041e15ba668f47f5ef85997d0af65763206d05e3748eab423e501497c2b",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
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"simsat_raw_dir": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0024_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0024_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0024_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0024_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0024_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0024_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0024_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
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"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/busia_kenya/busia_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/busia_kenya/busia_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/busia_kenya/busia_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/busia_kenya/busia_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/busia_kenya/busia_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/busia_kenya/busia_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/busia_kenya/osm_health_facilities_busia.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/busia_kenya/osm_major_roads_busia.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/busia_kenya/osm_schools_waterpoints_busia.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/busia_kenya/osm_urban_landuse_busia.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/busia_kenya/osm_water_surface_busia.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/busia_kenya/osm_waterways_busia.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
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"data/raw/map_gbif/busia_kenya/gbif_freshwater_snails_busia_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
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"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 0.531272,
|
| 78 |
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"sentinel_datetime": "2025-12-08T08:10:14Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 61.9359,
|
| 84 |
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|
| 85 |
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|
| 86 |
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"numeric_features": {
|
| 87 |
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|
| 88 |
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|
| 89 |
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|
| 90 |
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|
| 91 |
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|
| 92 |
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|
| 93 |
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"median": 8.776,
|
| 94 |
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"p90": 9.3622
|
| 95 |
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},
|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 261804,
|
| 101 |
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"min": 0.0002,
|
| 102 |
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"max": 29.4041,
|
| 103 |
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"mean": 3.974,
|
| 104 |
+
"median": 2.07,
|
| 105 |
+
"p90": 9.7697
|
| 106 |
+
},
|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
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},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
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"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
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}
|
| 119 |
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},
|
| 120 |
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"osm_counts": {
|
| 121 |
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"health_facilities": 0,
|
| 122 |
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"major_roads": 113,
|
| 123 |
+
"schools_waterpoints": 0,
|
| 124 |
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"urban_landuse": 2612,
|
| 125 |
+
"water_surface": 0,
|
| 126 |
+
"waterways": 0
|
| 127 |
+
},
|
| 128 |
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"label_counts": {
|
| 129 |
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"vector_label": 0,
|
| 130 |
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"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 18,
|
| 132 |
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"disease_aggregate": 0
|
| 133 |
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}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0025_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "busia_schistosomiasis_s0025_label_positive_jitter",
|
| 6 |
+
"aoi_id": "busia_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Kenya",
|
| 11 |
+
"name": "Busia County, Kenya",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
+
"lon": 34.20132856129131,
|
| 17 |
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"lat": 0.409631683181288
|
| 18 |
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},
|
| 19 |
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"bbox": [
|
| 20 |
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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],
|
| 25 |
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"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/busia_schistosomiasis/busia_schistosomiasis_s0025_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "135e4f750ab4be282072ebf616f9604b8d75da7e5f64efc24141eda70d540c9c",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0025_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0025_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0025_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0025_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0025_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0025_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0025_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/busia_kenya/busia_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/busia_kenya/busia_worldpop_2025_constrained_100m.tif",
|
| 50 |
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"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/busia_kenya/busia_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/busia_kenya/busia_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/busia_kenya/busia_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/busia_kenya/busia_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/busia_kenya/osm_health_facilities_busia.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/busia_kenya/osm_major_roads_busia.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/busia_kenya/osm_schools_waterpoints_busia.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/busia_kenya/osm_urban_landuse_busia.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/busia_kenya/osm_water_surface_busia.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/busia_kenya/osm_waterways_busia.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
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"data/raw/map_gbif/busia_kenya/gbif_freshwater_snails_busia_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 0.531272,
|
| 78 |
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"sentinel_datetime": "2025-12-08T08:10:14Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 60.7382,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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|
| 90 |
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"min": 5.899,
|
| 91 |
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|
| 92 |
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|
| 93 |
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|
| 94 |
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"p90": 7.0138
|
| 95 |
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|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 250934,
|
| 101 |
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|
| 102 |
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"max": 21.0131,
|
| 103 |
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|
| 104 |
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"median": 1.9667,
|
| 105 |
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"p90": 7.2638
|
| 106 |
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},
|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
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"valid_pixels": 0
|
| 109 |
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},
|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
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"valid_pixels": 0
|
| 112 |
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},
|
| 113 |
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"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
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},
|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
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"valid_pixels": 0
|
| 118 |
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}
|
| 119 |
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},
|
| 120 |
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"osm_counts": {
|
| 121 |
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"health_facilities": 0,
|
| 122 |
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"major_roads": 37,
|
| 123 |
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"schools_waterpoints": 8,
|
| 124 |
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"urban_landuse": 2,
|
| 125 |
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"water_surface": 0,
|
| 126 |
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"waterways": 1
|
| 127 |
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},
|
| 128 |
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"label_counts": {
|
| 129 |
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"vector_label": 0,
|
| 130 |
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"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 5,
|
| 132 |
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"disease_aggregate": 0
|
| 133 |
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}
|
| 134 |
+
},
|
| 135 |
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"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0026_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
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|
|
|
|
|
|
|
|
|
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|
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|
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|
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|
|
|
|
|
|
|
|
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|
|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
| 1 |
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{
|
| 2 |
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|
| 3 |
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|
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|
| 5 |
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|
| 6 |
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|
| 7 |
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|
| 8 |
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|
| 9 |
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| 10 |
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| 11 |
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| 12 |
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| 13 |
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| 27 |
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| 28 |
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| 29 |
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|
| 30 |
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|
| 31 |
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|
| 32 |
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| 33 |
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| 39 |
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| 40 |
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|
| 41 |
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|
| 42 |
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"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0026_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
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"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0026_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
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| 45 |
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| 46 |
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| 48 |
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|
| 50 |
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| 51 |
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| 52 |
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|
| 55 |
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|
| 57 |
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|
| 58 |
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| 59 |
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|
| 60 |
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|
| 61 |
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"water_surface": "data/raw/osm/busia_kenya/osm_water_surface_busia.overpass.json",
|
| 62 |
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|
| 63 |
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|
| 64 |
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|
| 65 |
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|
| 66 |
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|
| 67 |
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|
| 68 |
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|
| 69 |
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| 70 |
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"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
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|
| 72 |
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|
| 73 |
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| 74 |
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|
| 75 |
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| 76 |
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| 79 |
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| 80 |
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| 81 |
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| 83 |
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|
| 84 |
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| 85 |
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| 86 |
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| 87 |
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| 88 |
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| 89 |
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|
| 90 |
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|
| 91 |
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|
| 92 |
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|
| 93 |
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|
| 94 |
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|
| 95 |
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| 96 |
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|
| 97 |
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| 98 |
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| 99 |
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| 100 |
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| 101 |
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| 102 |
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|
| 103 |
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|
| 104 |
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|
| 105 |
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|
| 106 |
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| 107 |
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|
| 108 |
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|
| 109 |
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|
| 110 |
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|
| 111 |
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|
| 112 |
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|
| 113 |
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|
| 114 |
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|
| 115 |
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|
| 116 |
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|
| 117 |
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|
| 118 |
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|
| 119 |
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|
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| 122 |
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|
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|
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|
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|
| 126 |
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|
| 127 |
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|
| 128 |
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|
| 129 |
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|
| 130 |
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|
| 131 |
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|
| 132 |
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|
| 133 |
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|
| 134 |
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|
| 135 |
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|
| 136 |
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"tier": "weak_label_positive",
|
| 137 |
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|
| 138 |
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},
|
| 139 |
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|
| 140 |
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|
| 141 |
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|
| 142 |
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|
| 143 |
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|
| 144 |
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|
| 145 |
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"sampling": {
|
| 146 |
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"sample_type": "label_positive_jitter",
|
| 147 |
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"sampler_version": "stratified-v0.1"
|
| 148 |
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}
|
| 149 |
+
}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0028_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
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"chip_id": "busia_schistosomiasis_s0028_label_positive_jitter",
|
| 6 |
+
"aoi_id": "busia_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Kenya",
|
| 11 |
+
"name": "Busia County, Kenya",
|
| 12 |
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"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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|
| 17 |
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|
| 18 |
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|
| 19 |
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|
| 20 |
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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],
|
| 25 |
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|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
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|
| 28 |
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|
| 29 |
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|
| 30 |
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],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/busia_schistosomiasis/busia_schistosomiasis_s0028_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "f0c94319d911c68ce2b9f0bddc061e1b5ce1407a2c45fc5430074f369830a75d",
|
| 34 |
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"width": 1024,
|
| 35 |
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|
| 36 |
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|
| 37 |
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"source_assets": {
|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
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"simsat_raw_dir": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0028_label_positive_jitter",
|
| 40 |
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"sentinel_rgb": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0028_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
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"sentinel_false_color": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0028_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
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"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0028_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
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"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0028_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
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"mapbox_satellite": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0028_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
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"mapbox_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0028_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
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"source_layers": {
|
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/busia_kenya/busia_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/busia_kenya/busia_worldpop_2025_constrained_100m.tif",
|
| 50 |
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"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/busia_kenya/busia_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/busia_kenya/busia_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/busia_kenya/busia_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/busia_kenya/busia_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/busia_kenya/osm_health_facilities_busia.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/busia_kenya/osm_major_roads_busia.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/busia_kenya/osm_schools_waterpoints_busia.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/busia_kenya/osm_urban_landuse_busia.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/busia_kenya/osm_water_surface_busia.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/busia_kenya/osm_waterways_busia.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
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|
| 67 |
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]
|
| 68 |
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}
|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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|
| 75 |
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|
| 76 |
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|
| 77 |
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| 78 |
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|
| 79 |
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| 80 |
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|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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|
| 84 |
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|
| 85 |
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|
| 86 |
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| 87 |
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| 88 |
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|
| 89 |
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|
| 90 |
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|
| 91 |
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|
| 92 |
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|
| 93 |
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"median": 8.7354,
|
| 94 |
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"p90": 9.3234
|
| 95 |
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|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 261493,
|
| 101 |
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"min": 0.0001,
|
| 102 |
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"max": 21.3143,
|
| 103 |
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"mean": 2.9948,
|
| 104 |
+
"median": 1.7147,
|
| 105 |
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"p90": 7.0661
|
| 106 |
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},
|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
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},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
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"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
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},
|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
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"valid_pixels": 0
|
| 118 |
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}
|
| 119 |
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},
|
| 120 |
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"osm_counts": {
|
| 121 |
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"health_facilities": 0,
|
| 122 |
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"major_roads": 131,
|
| 123 |
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"schools_waterpoints": 0,
|
| 124 |
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"urban_landuse": 1372,
|
| 125 |
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"water_surface": 0,
|
| 126 |
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"waterways": 0
|
| 127 |
+
},
|
| 128 |
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"label_counts": {
|
| 129 |
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"vector_label": 0,
|
| 130 |
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"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 18,
|
| 132 |
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"disease_aggregate": 0
|
| 133 |
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}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0029_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "busia_schistosomiasis_s0029_label_positive_jitter",
|
| 6 |
+
"aoi_id": "busia_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Kenya",
|
| 11 |
+
"name": "Busia County, Kenya",
|
| 12 |
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"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 34.363187949228625,
|
| 17 |
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|
| 18 |
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},
|
| 19 |
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|
| 20 |
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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],
|
| 25 |
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"panel_order": [
|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
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"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
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"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
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"path": "image_packets/busia_schistosomiasis/busia_schistosomiasis_s0029_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "7dba5065c665020f7354aa3dde2d86dc80e45c7530aaf81b21b0fbb4a56e0560",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0029_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0029_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0029_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0029_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0029_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0029_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
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"mapbox_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0029_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/busia_kenya/busia_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/busia_kenya/busia_worldpop_2025_constrained_100m.tif",
|
| 50 |
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"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/busia_kenya/busia_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/busia_kenya/busia_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/busia_kenya/busia_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/busia_kenya/busia_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/busia_kenya/osm_health_facilities_busia.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/busia_kenya/osm_major_roads_busia.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/busia_kenya/osm_schools_waterpoints_busia.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/busia_kenya/osm_urban_landuse_busia.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/busia_kenya/osm_water_surface_busia.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/busia_kenya/osm_waterways_busia.overpass.json"
|
| 63 |
+
},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
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"data/raw/map_gbif/busia_kenya/gbif_freshwater_snails_busia_occurrences.csv"
|
| 67 |
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]
|
| 68 |
+
}
|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 0.531272,
|
| 78 |
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"sentinel_datetime": "2025-12-08T08:10:14Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 62.5017,
|
| 84 |
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|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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|
| 88 |
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|
| 89 |
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|
| 90 |
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|
| 91 |
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|
| 92 |
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|
| 93 |
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|
| 94 |
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|
| 95 |
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|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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|
| 98 |
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},
|
| 99 |
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|
| 100 |
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|
| 101 |
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|
| 102 |
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|
| 103 |
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|
| 104 |
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|
| 105 |
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"p90": 5.8821
|
| 106 |
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|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
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"valid_pixels": 0
|
| 109 |
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},
|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
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"valid_pixels": 0
|
| 112 |
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},
|
| 113 |
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"jrc_gsw_transitions": {
|
| 114 |
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"valid_pixels": 0
|
| 115 |
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},
|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
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"valid_pixels": 0
|
| 118 |
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}
|
| 119 |
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},
|
| 120 |
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"osm_counts": {
|
| 121 |
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|
| 122 |
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|
| 123 |
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|
| 124 |
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"urban_landuse": 670,
|
| 125 |
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|
| 126 |
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|
| 127 |
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},
|
| 128 |
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"label_counts": {
|
| 129 |
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"vector_label": 0,
|
| 130 |
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"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 18,
|
| 132 |
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"disease_aggregate": 0
|
| 133 |
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}
|
| 134 |
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},
|
| 135 |
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"label_quality": {
|
| 136 |
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"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0030_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
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|
|
|
|
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|
|
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|
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|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
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|
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|
|
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|
|
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|
|
|
|
|
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| 1 |
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{
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| 7 |
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| 9 |
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| 10 |
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| 11 |
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| 12 |
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| 29 |
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|
| 30 |
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| 31 |
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| 32 |
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| 33 |
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| 39 |
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| 40 |
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|
| 41 |
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|
| 42 |
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|
| 43 |
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"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0030_label_positive_jitter/sentinel_metadata.json",
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| 44 |
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| 45 |
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| 50 |
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|
| 55 |
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| 58 |
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| 60 |
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| 61 |
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"water_surface": "data/raw/osm/busia_kenya/osm_water_surface_busia.overpass.json",
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| 62 |
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"waterways": "data/raw/osm/busia_kenya/osm_waterways_busia.overpass.json"
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| 63 |
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| 64 |
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| 65 |
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| 66 |
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|
| 67 |
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|
| 68 |
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|
| 69 |
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| 70 |
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"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
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|
| 72 |
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| 73 |
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| 74 |
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| 75 |
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| 79 |
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| 80 |
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| 81 |
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| 84 |
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| 86 |
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| 87 |
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| 90 |
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|
| 91 |
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| 92 |
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| 93 |
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| 94 |
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|
| 95 |
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| 96 |
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| 97 |
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| 98 |
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| 99 |
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| 100 |
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| 102 |
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| 103 |
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| 104 |
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|
| 105 |
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|
| 106 |
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| 107 |
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| 108 |
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|
| 109 |
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|
| 110 |
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|
| 111 |
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|
| 112 |
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| 113 |
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|
| 114 |
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|
| 115 |
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|
| 116 |
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|
| 117 |
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| 118 |
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| 119 |
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| 130 |
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| 131 |
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| 132 |
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|
| 133 |
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|
| 134 |
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|
| 135 |
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"label_quality": {
|
| 136 |
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"tier": "weak_label_positive",
|
| 137 |
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|
| 138 |
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},
|
| 139 |
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|
| 140 |
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|
| 141 |
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|
| 142 |
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|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
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},
|
| 145 |
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"sampling": {
|
| 146 |
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"sample_type": "label_positive_jitter",
|
| 147 |
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"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0031_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "busia_schistosomiasis_s0031_label_positive_jitter",
|
| 6 |
+
"aoi_id": "busia_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Kenya",
|
| 11 |
+
"name": "Busia County, Kenya",
|
| 12 |
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"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 34.36249261065372,
|
| 17 |
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|
| 18 |
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},
|
| 19 |
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"bbox": [
|
| 20 |
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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],
|
| 25 |
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"panel_order": [
|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
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|
| 28 |
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|
| 29 |
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|
| 30 |
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],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/busia_schistosomiasis/busia_schistosomiasis_s0031_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "35e7e7b4856f96a7cc3dcb0a0745acb80bb4619589c574565d211f84aefe7447",
|
| 34 |
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"width": 1024,
|
| 35 |
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| 36 |
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|
| 37 |
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"source_assets": {
|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
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"simsat_raw_dir": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0031_label_positive_jitter",
|
| 40 |
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"sentinel_rgb": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0031_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
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"sentinel_false_color": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0031_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
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"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0031_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
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"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0031_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
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"mapbox_satellite": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0031_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
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"mapbox_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0031_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
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"source_layers": {
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|
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|
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|
| 50 |
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"jrc_gsw": {
|
| 51 |
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|
| 52 |
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"seasonality": "data/raw/jrc_gsw/busia_kenya/busia_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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|
| 55 |
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|
| 56 |
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|
| 57 |
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|
| 58 |
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|
| 59 |
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|
| 60 |
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|
| 61 |
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"water_surface": "data/raw/osm/busia_kenya/osm_water_surface_busia.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/busia_kenya/osm_waterways_busia.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
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|
| 67 |
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]
|
| 68 |
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}
|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
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| 74 |
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|
| 75 |
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|
| 76 |
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| 77 |
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|
| 78 |
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|
| 79 |
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| 80 |
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|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
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| 82 |
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|
| 83 |
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| 84 |
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|
| 89 |
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|
| 90 |
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| 91 |
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| 92 |
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| 93 |
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| 94 |
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| 95 |
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| 96 |
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| 97 |
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| 98 |
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| 99 |
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| 100 |
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|
| 101 |
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|
| 102 |
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|
| 103 |
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|
| 104 |
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"median": 1.5489,
|
| 105 |
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|
| 106 |
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| 107 |
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|
| 108 |
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|
| 109 |
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|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
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|
| 112 |
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|
| 113 |
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"jrc_gsw_transitions": {
|
| 114 |
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|
| 115 |
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|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
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|
| 118 |
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|
| 119 |
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|
| 120 |
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|
| 121 |
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|
| 122 |
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|
| 123 |
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|
| 124 |
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|
| 125 |
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|
| 126 |
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|
| 127 |
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|
| 128 |
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"label_counts": {
|
| 129 |
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|
| 130 |
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|
| 131 |
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"intermediate_host_label": 18,
|
| 132 |
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"disease_aggregate": 0
|
| 133 |
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}
|
| 134 |
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},
|
| 135 |
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"label_quality": {
|
| 136 |
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"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
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"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
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|
| 145 |
+
"sampling": {
|
| 146 |
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"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0032_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
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|
|
|
|
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|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
|
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|
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|
|
|
|
|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
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|
|
|
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|
|
|
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|
|
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|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
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|
|
|
|
|
|
|
|
|
|
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|
|
|
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|
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|
|
|
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|
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|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
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"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
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"chip_id": "busia_schistosomiasis_s0032_label_positive_jitter",
|
| 6 |
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|
| 7 |
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"split": "train",
|
| 8 |
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"disease_module": "schistosomiasis",
|
| 9 |
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"primary_disease": "schistosomiasis",
|
| 10 |
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"country": "Kenya",
|
| 11 |
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"name": "Busia County, Kenya",
|
| 12 |
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"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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|
| 14 |
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|
| 15 |
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|
| 16 |
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|
| 17 |
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|
| 18 |
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|
| 19 |
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|
| 20 |
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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],
|
| 25 |
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|
| 26 |
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|
| 27 |
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|
| 28 |
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"bottom_left: Mapbox satellite context",
|
| 29 |
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"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
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],
|
| 31 |
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"image_packet": {
|
| 32 |
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"path": "image_packets/busia_schistosomiasis/busia_schistosomiasis_s0032_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "5aa22c426a00d770bbf70eac90a1846b79292488cfd3b2d0714ad7c103a8c598",
|
| 34 |
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"width": 1024,
|
| 35 |
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|
| 36 |
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|
| 37 |
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"source_assets": {
|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
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"simsat_raw_dir": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0032_label_positive_jitter",
|
| 40 |
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"sentinel_rgb": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0032_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
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"sentinel_false_color": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0032_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0032_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0032_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
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"mapbox_satellite": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0032_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
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"mapbox_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0032_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
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"source_layers": {
|
| 47 |
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|
| 48 |
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|
| 49 |
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"population_worldpop": "data/raw/worldpop/busia_kenya/busia_worldpop_2025_constrained_100m.tif",
|
| 50 |
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"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/busia_kenya/busia_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/busia_kenya/busia_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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|
| 54 |
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"extent": "data/raw/jrc_gsw/busia_kenya/busia_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/busia_kenya/osm_health_facilities_busia.overpass.json",
|
| 58 |
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|
| 59 |
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|
| 60 |
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|
| 61 |
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"water_surface": "data/raw/osm/busia_kenya/osm_water_surface_busia.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/busia_kenya/osm_waterways_busia.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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|
| 66 |
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|
| 67 |
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]
|
| 68 |
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}
|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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|
| 75 |
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|
| 76 |
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|
| 77 |
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|
| 78 |
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|
| 79 |
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|
| 80 |
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|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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|
| 83 |
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| 84 |
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| 85 |
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| 86 |
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| 87 |
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| 88 |
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| 89 |
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| 90 |
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| 91 |
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| 92 |
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|
| 93 |
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| 94 |
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|
| 95 |
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| 96 |
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| 97 |
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| 98 |
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| 99 |
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| 100 |
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| 101 |
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| 102 |
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|
| 103 |
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| 104 |
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|
| 105 |
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|
| 106 |
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| 107 |
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|
| 108 |
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|
| 109 |
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|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
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|
| 112 |
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|
| 113 |
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"jrc_gsw_transitions": {
|
| 114 |
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|
| 115 |
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|
| 116 |
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|
| 117 |
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|
| 118 |
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|
| 119 |
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},
|
| 120 |
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|
| 121 |
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|
| 122 |
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|
| 123 |
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|
| 124 |
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|
| 125 |
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|
| 126 |
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|
| 127 |
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},
|
| 128 |
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|
| 129 |
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|
| 130 |
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|
| 131 |
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|
| 132 |
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|
| 133 |
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}
|
| 134 |
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},
|
| 135 |
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"label_quality": {
|
| 136 |
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"tier": "weak_label_positive",
|
| 137 |
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"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
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},
|
| 139 |
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|
| 140 |
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"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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|
| 142 |
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|
| 143 |
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|
| 144 |
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|
| 145 |
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"sampling": {
|
| 146 |
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"sample_type": "label_positive_jitter",
|
| 147 |
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"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0036_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
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|
|
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|
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|
|
|
|
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|
|
|
|
|
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|
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|
|
|
|
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|
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|
|
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|
|
|
|
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|
|
|
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|
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|
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|
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|
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|
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|
|
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|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
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| 6 |
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|
| 7 |
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|
| 8 |
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| 9 |
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| 10 |
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| 11 |
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|
| 12 |
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|
| 13 |
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| 14 |
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| 28 |
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| 29 |
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|
| 30 |
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|
| 31 |
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|
| 32 |
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"path": "image_packets/busia_schistosomiasis/busia_schistosomiasis_s0036_label_positive_jitter_packet.png",
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| 33 |
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"sha256": "a46a5faf15a88f8c3759b7c97af78fb980cc7d8726e957db91abd7d4e2b60f7e",
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|
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| 37 |
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|
| 38 |
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|
| 39 |
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|
| 40 |
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|
| 41 |
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|
| 42 |
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"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0036_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
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"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0036_label_positive_jitter/sentinel_metadata.json",
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| 44 |
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| 45 |
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| 46 |
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|
| 50 |
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|
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| 52 |
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|
| 55 |
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|
| 56 |
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|
| 57 |
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|
| 58 |
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|
| 59 |
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"schools_waterpoints": "data/raw/osm/busia_kenya/osm_schools_waterpoints_busia.overpass.json",
|
| 60 |
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|
| 61 |
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"water_surface": "data/raw/osm/busia_kenya/osm_water_surface_busia.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/busia_kenya/osm_waterways_busia.overpass.json"
|
| 63 |
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|
| 64 |
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|
| 65 |
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|
| 66 |
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|
| 67 |
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|
| 68 |
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|
| 69 |
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|
| 70 |
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"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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|
| 73 |
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"quality": {
|
| 74 |
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|
| 75 |
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|
| 76 |
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|
| 77 |
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|
| 78 |
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|
| 79 |
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| 80 |
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|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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|
| 83 |
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|
| 84 |
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|
| 85 |
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| 86 |
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|
| 87 |
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| 88 |
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|
| 89 |
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|
| 90 |
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|
| 91 |
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|
| 92 |
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|
| 93 |
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|
| 94 |
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|
| 95 |
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| 96 |
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|
| 97 |
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|
| 98 |
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| 99 |
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|
| 100 |
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|
| 101 |
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|
| 102 |
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|
| 103 |
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|
| 104 |
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|
| 105 |
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|
| 106 |
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|
| 107 |
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|
| 108 |
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|
| 109 |
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|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
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|
| 112 |
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},
|
| 113 |
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"jrc_gsw_transitions": {
|
| 114 |
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|
| 115 |
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|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
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|
| 118 |
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|
| 119 |
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|
| 120 |
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|
| 121 |
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|
| 122 |
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|
| 123 |
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|
| 124 |
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|
| 125 |
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|
| 126 |
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|
| 127 |
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},
|
| 128 |
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"label_counts": {
|
| 129 |
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|
| 130 |
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|
| 131 |
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|
| 132 |
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|
| 133 |
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}
|
| 134 |
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},
|
| 135 |
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"label_quality": {
|
| 136 |
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"tier": "weak_label_positive",
|
| 137 |
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"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
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},
|
| 139 |
+
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|
| 140 |
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"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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|
| 142 |
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|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
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},
|
| 145 |
+
"sampling": {
|
| 146 |
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"sample_type": "label_positive_jitter",
|
| 147 |
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"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0037_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "busia_schistosomiasis_s0037_label_positive_jitter",
|
| 6 |
+
"aoi_id": "busia_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Kenya",
|
| 11 |
+
"name": "Busia County, Kenya",
|
| 12 |
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"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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|
| 17 |
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|
| 18 |
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},
|
| 19 |
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|
| 20 |
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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],
|
| 25 |
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"panel_order": [
|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
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|
| 28 |
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"bottom_left: Mapbox satellite context",
|
| 29 |
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|
| 30 |
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],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/busia_schistosomiasis/busia_schistosomiasis_s0037_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "6bc8adfce3c700c3ce11e7a93cd60b3607bd2223330209c3888a0761fc147d4c",
|
| 34 |
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"width": 1024,
|
| 35 |
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|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
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"simsat_raw_dir": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0037_label_positive_jitter",
|
| 40 |
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"sentinel_rgb": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0037_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
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"sentinel_false_color": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0037_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
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"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0037_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
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"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0037_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
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"mapbox_satellite": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0037_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
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"mapbox_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0037_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
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"source_layers": {
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|
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|
| 49 |
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|
| 50 |
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"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/busia_kenya/busia_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/busia_kenya/busia_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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|
| 54 |
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|
| 55 |
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|
| 56 |
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|
| 57 |
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|
| 58 |
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|
| 59 |
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|
| 60 |
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|
| 61 |
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"water_surface": "data/raw/osm/busia_kenya/osm_water_surface_busia.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/busia_kenya/osm_waterways_busia.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
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|
| 67 |
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]
|
| 68 |
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}
|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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|
| 76 |
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|
| 77 |
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|
| 78 |
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|
| 79 |
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|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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|
| 83 |
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| 84 |
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| 86 |
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| 89 |
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|
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| 93 |
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|
| 94 |
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|
| 95 |
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|
| 96 |
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| 97 |
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|
| 98 |
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|
| 99 |
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| 100 |
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|
| 101 |
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|
| 102 |
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|
| 103 |
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|
| 104 |
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"median": 1.7527,
|
| 105 |
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"p90": 7.1378
|
| 106 |
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|
| 107 |
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|
| 108 |
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|
| 109 |
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|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
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|
| 112 |
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|
| 113 |
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"jrc_gsw_transitions": {
|
| 114 |
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|
| 115 |
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|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
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|
| 118 |
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|
| 119 |
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|
| 120 |
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|
| 121 |
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|
| 122 |
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"major_roads": 135,
|
| 123 |
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|
| 124 |
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|
| 125 |
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|
| 126 |
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|
| 127 |
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|
| 128 |
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"label_counts": {
|
| 129 |
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|
| 130 |
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|
| 131 |
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"intermediate_host_label": 18,
|
| 132 |
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"disease_aggregate": 0
|
| 133 |
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}
|
| 134 |
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},
|
| 135 |
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"label_quality": {
|
| 136 |
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"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
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},
|
| 145 |
+
"sampling": {
|
| 146 |
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"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0039_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
|
|
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|
|
|
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|
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|
|
|
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|
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|
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|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
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|
|
|
|
|
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|
|
|
|
|
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|
|
|
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|
|
|
|
|
|
|
|
|
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|
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|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
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|
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|
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|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
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"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
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"chip_id": "busia_schistosomiasis_s0039_label_positive_jitter",
|
| 6 |
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|
| 7 |
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"split": "train",
|
| 8 |
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|
| 9 |
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"primary_disease": "schistosomiasis",
|
| 10 |
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"country": "Kenya",
|
| 11 |
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"name": "Busia County, Kenya",
|
| 12 |
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"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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|
| 14 |
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|
| 15 |
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|
| 16 |
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|
| 17 |
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|
| 18 |
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|
| 19 |
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|
| 20 |
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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],
|
| 25 |
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|
| 26 |
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|
| 27 |
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|
| 28 |
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"bottom_left: Mapbox satellite context",
|
| 29 |
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"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
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],
|
| 31 |
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"image_packet": {
|
| 32 |
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"path": "image_packets/busia_schistosomiasis/busia_schistosomiasis_s0039_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "120a9380789b7fa5754496aebbc9895057e3634402c9e0062e34069e752fb36d",
|
| 34 |
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|
| 35 |
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|
| 36 |
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|
| 37 |
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"source_assets": {
|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
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"simsat_raw_dir": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0039_label_positive_jitter",
|
| 40 |
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"sentinel_rgb": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0039_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
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"sentinel_false_color": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0039_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0039_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0039_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
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"mapbox_satellite": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0039_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
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"mapbox_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0039_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
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|
| 47 |
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|
| 48 |
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|
| 49 |
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"population_worldpop": "data/raw/worldpop/busia_kenya/busia_worldpop_2025_constrained_100m.tif",
|
| 50 |
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"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/busia_kenya/busia_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/busia_kenya/busia_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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|
| 54 |
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"extent": "data/raw/jrc_gsw/busia_kenya/busia_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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|
| 57 |
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|
| 58 |
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|
| 59 |
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|
| 60 |
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|
| 61 |
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"water_surface": "data/raw/osm/busia_kenya/osm_water_surface_busia.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/busia_kenya/osm_waterways_busia.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
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|
| 67 |
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]
|
| 68 |
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}
|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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|
| 75 |
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|
| 76 |
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|
| 77 |
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|
| 78 |
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|
| 79 |
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|
| 80 |
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|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
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| 82 |
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|
| 83 |
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|
| 84 |
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|
| 85 |
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|
| 86 |
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| 87 |
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| 88 |
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|
| 89 |
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|
| 90 |
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|
| 91 |
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|
| 92 |
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|
| 93 |
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|
| 94 |
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|
| 95 |
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| 96 |
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| 97 |
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| 98 |
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| 99 |
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| 100 |
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|
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|
| 102 |
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| 103 |
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|
| 104 |
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|
| 105 |
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|
| 106 |
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| 107 |
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|
| 108 |
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|
| 109 |
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|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
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|
| 112 |
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|
| 113 |
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"jrc_gsw_transitions": {
|
| 114 |
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|
| 115 |
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|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
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|
| 118 |
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}
|
| 119 |
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},
|
| 120 |
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|
| 121 |
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|
| 122 |
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|
| 123 |
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|
| 124 |
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|
| 125 |
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|
| 126 |
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|
| 127 |
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|
| 128 |
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|
| 129 |
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|
| 130 |
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|
| 131 |
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|
| 132 |
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|
| 133 |
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}
|
| 134 |
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},
|
| 135 |
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"label_quality": {
|
| 136 |
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"tier": "weak_label_positive",
|
| 137 |
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"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
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},
|
| 139 |
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"license_flags": {
|
| 140 |
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"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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|
| 142 |
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|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
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|
| 145 |
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"sampling": {
|
| 146 |
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"sample_type": "label_positive_jitter",
|
| 147 |
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"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0041_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
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|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
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|
|
|
|
|
|
|
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|
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|
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|
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|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "busia_schistosomiasis_s0041_label_positive_jitter",
|
| 6 |
+
"aoi_id": "busia_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
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| 11 |
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|
| 12 |
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| 13 |
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| 26 |
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| 27 |
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| 28 |
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|
| 29 |
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|
| 30 |
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],
|
| 31 |
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"image_packet": {
|
| 32 |
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"path": "image_packets/busia_schistosomiasis/busia_schistosomiasis_s0041_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "244145d274f699a05a1b53dfcce4b12b80a8cb052495a447ace2a3160916d04f",
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|
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| 36 |
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| 38 |
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|
| 39 |
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|
| 40 |
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|
| 41 |
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|
| 42 |
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"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0041_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
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"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0041_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
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"mapbox_satellite": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0041_label_positive_jitter/mapbox_satellite.png",
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| 45 |
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| 46 |
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| 50 |
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|
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| 52 |
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|
| 55 |
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|
| 56 |
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|
| 57 |
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|
| 58 |
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"major_roads": "data/raw/osm/busia_kenya/osm_major_roads_busia.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/busia_kenya/osm_schools_waterpoints_busia.overpass.json",
|
| 60 |
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|
| 61 |
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"water_surface": "data/raw/osm/busia_kenya/osm_water_surface_busia.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/busia_kenya/osm_waterways_busia.overpass.json"
|
| 63 |
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|
| 64 |
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"labels": {
|
| 65 |
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|
| 66 |
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|
| 67 |
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]
|
| 68 |
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|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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|
| 77 |
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|
| 78 |
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|
| 79 |
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| 80 |
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|
| 81 |
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| 82 |
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|
| 83 |
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|
| 84 |
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|
| 85 |
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| 86 |
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| 87 |
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| 88 |
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|
| 89 |
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|
| 90 |
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|
| 91 |
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|
| 92 |
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|
| 93 |
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|
| 94 |
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|
| 95 |
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| 96 |
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|
| 97 |
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| 98 |
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| 99 |
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|
| 100 |
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|
| 101 |
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|
| 102 |
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|
| 103 |
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|
| 104 |
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|
| 105 |
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|
| 106 |
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| 107 |
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|
| 108 |
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"valid_pixels": 0
|
| 109 |
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},
|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
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|
| 112 |
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|
| 113 |
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"jrc_gsw_transitions": {
|
| 114 |
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"valid_pixels": 0
|
| 115 |
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|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
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|
| 118 |
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|
| 119 |
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|
| 120 |
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|
| 121 |
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|
| 122 |
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|
| 123 |
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|
| 124 |
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|
| 125 |
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|
| 126 |
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|
| 127 |
+
},
|
| 128 |
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"label_counts": {
|
| 129 |
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"vector_label": 0,
|
| 130 |
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|
| 131 |
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|
| 132 |
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|
| 133 |
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}
|
| 134 |
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},
|
| 135 |
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"label_quality": {
|
| 136 |
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"tier": "weak_label_positive",
|
| 137 |
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"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
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},
|
| 139 |
+
"license_flags": {
|
| 140 |
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"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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|
| 142 |
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|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
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},
|
| 145 |
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"sampling": {
|
| 146 |
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"sample_type": "label_positive_jitter",
|
| 147 |
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"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0042_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "busia_schistosomiasis_s0042_label_positive_jitter",
|
| 6 |
+
"aoi_id": "busia_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Kenya",
|
| 11 |
+
"name": "Busia County, Kenya",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 34.18901190378767,
|
| 17 |
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|
| 18 |
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},
|
| 19 |
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|
| 20 |
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|
| 21 |
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|
| 22 |
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|
| 23 |
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| 24 |
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],
|
| 25 |
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"panel_order": [
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| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
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|
| 28 |
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|
| 29 |
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|
| 30 |
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],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/busia_schistosomiasis/busia_schistosomiasis_s0042_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "58316ebf82012010239e938516803c48d205fa4a54b36d0e98ae81227558c74c",
|
| 34 |
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"width": 1024,
|
| 35 |
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|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
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"simsat_raw_dir": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0042_label_positive_jitter",
|
| 40 |
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"sentinel_rgb": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0042_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
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"sentinel_false_color": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0042_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
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"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0042_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0042_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
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"mapbox_satellite": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0042_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
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"mapbox_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0042_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
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|
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|
| 48 |
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|
| 49 |
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|
| 50 |
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"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/busia_kenya/busia_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/busia_kenya/busia_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/busia_kenya/busia_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/busia_kenya/busia_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/busia_kenya/osm_health_facilities_busia.overpass.json",
|
| 58 |
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|
| 59 |
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|
| 60 |
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"urban_landuse": "data/raw/osm/busia_kenya/osm_urban_landuse_busia.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/busia_kenya/osm_water_surface_busia.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/busia_kenya/osm_waterways_busia.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
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|
| 67 |
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]
|
| 68 |
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|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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|
| 76 |
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| 77 |
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|
| 78 |
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|
| 79 |
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|
| 80 |
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|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
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| 82 |
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|
| 83 |
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| 84 |
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|
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|
| 94 |
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|
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|
| 97 |
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|
| 100 |
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|
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|
| 102 |
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"max": 21.0237,
|
| 103 |
+
"mean": 3.1809,
|
| 104 |
+
"median": 2.1765,
|
| 105 |
+
"p90": 7.1878
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
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},
|
| 120 |
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"osm_counts": {
|
| 121 |
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"health_facilities": 0,
|
| 122 |
+
"major_roads": 37,
|
| 123 |
+
"schools_waterpoints": 5,
|
| 124 |
+
"urban_landuse": 4,
|
| 125 |
+
"water_surface": 0,
|
| 126 |
+
"waterways": 1
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 5,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0043_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
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|
|
|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "busia_schistosomiasis_s0043_label_positive_jitter",
|
| 6 |
+
"aoi_id": "busia_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Kenya",
|
| 11 |
+
"name": "Busia County, Kenya",
|
| 12 |
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"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 34.363877969536695,
|
| 17 |
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"lat": 0.22021336569608896
|
| 18 |
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},
|
| 19 |
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"bbox": [
|
| 20 |
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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],
|
| 25 |
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"panel_order": [
|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/busia_schistosomiasis/busia_schistosomiasis_s0043_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "673ddd21f52a651f5ae4bc26620e09d3353de65427b0aa7766b0630fd7b89cee",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0043_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0043_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0043_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0043_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0043_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0043_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0043_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/busia_kenya/busia_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/busia_kenya/busia_worldpop_2025_constrained_100m.tif",
|
| 50 |
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"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/busia_kenya/busia_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/busia_kenya/busia_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/busia_kenya/busia_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/busia_kenya/busia_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/busia_kenya/osm_health_facilities_busia.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/busia_kenya/osm_major_roads_busia.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/busia_kenya/osm_schools_waterpoints_busia.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/busia_kenya/osm_urban_landuse_busia.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/busia_kenya/osm_water_surface_busia.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/busia_kenya/osm_waterways_busia.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
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"data/raw/map_gbif/busia_kenya/gbif_freshwater_snails_busia_occurrences.csv"
|
| 67 |
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]
|
| 68 |
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}
|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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|
| 77 |
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"sentinel_cloud_cover_percent": 0.531272,
|
| 78 |
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"sentinel_datetime": "2025-12-08T08:10:14Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 61.9912,
|
| 84 |
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|
| 85 |
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|
| 86 |
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"numeric_features": {
|
| 87 |
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|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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|
| 90 |
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"min": 8.0421,
|
| 91 |
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"max": 9.6011,
|
| 92 |
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"mean": 8.7527,
|
| 93 |
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|
| 94 |
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|
| 95 |
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|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 261260,
|
| 101 |
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|
| 102 |
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|
| 103 |
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|
| 104 |
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"median": 1.5412,
|
| 105 |
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"p90": 5.0871
|
| 106 |
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|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
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"valid_pixels": 0
|
| 109 |
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},
|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
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"valid_pixels": 0
|
| 112 |
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},
|
| 113 |
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"jrc_gsw_transitions": {
|
| 114 |
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"valid_pixels": 0
|
| 115 |
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},
|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
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"valid_pixels": 0
|
| 118 |
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}
|
| 119 |
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},
|
| 120 |
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"osm_counts": {
|
| 121 |
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"health_facilities": 0,
|
| 122 |
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|
| 123 |
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"schools_waterpoints": 0,
|
| 124 |
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"urban_landuse": 564,
|
| 125 |
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"water_surface": 0,
|
| 126 |
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"waterways": 0
|
| 127 |
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},
|
| 128 |
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"label_counts": {
|
| 129 |
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"vector_label": 0,
|
| 130 |
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"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 18,
|
| 132 |
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"disease_aggregate": 0
|
| 133 |
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}
|
| 134 |
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},
|
| 135 |
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"label_quality": {
|
| 136 |
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"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
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},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0044_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "busia_schistosomiasis_s0044_label_positive_jitter",
|
| 6 |
+
"aoi_id": "busia_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Kenya",
|
| 11 |
+
"name": "Busia County, Kenya",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
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|
| 30 |
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| 31 |
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|
| 32 |
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| 33 |
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| 39 |
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|
| 41 |
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|
| 42 |
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|
| 43 |
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|
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|
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|
| 60 |
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| 62 |
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|
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|
| 64 |
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| 65 |
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|
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|
| 67 |
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|
| 68 |
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|
| 69 |
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| 70 |
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"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
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|
| 72 |
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|
| 73 |
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| 74 |
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|
| 75 |
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|
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| 79 |
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| 80 |
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|
| 81 |
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| 82 |
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|
| 83 |
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| 85 |
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| 86 |
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| 87 |
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| 88 |
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| 89 |
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| 93 |
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| 95 |
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| 98 |
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| 102 |
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| 103 |
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| 104 |
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|
| 105 |
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|
| 106 |
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| 108 |
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|
| 109 |
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|
| 111 |
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|
| 112 |
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|
| 114 |
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|
| 115 |
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|
| 118 |
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|
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|
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|
| 125 |
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|
| 126 |
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|
| 127 |
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|
| 128 |
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|
| 129 |
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|
| 130 |
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|
| 131 |
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|
| 132 |
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|
| 133 |
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|
| 134 |
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|
| 135 |
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|
| 136 |
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"tier": "weak_label_positive",
|
| 137 |
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|
| 138 |
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|
| 139 |
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|
| 140 |
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|
| 141 |
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|
| 142 |
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|
| 143 |
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|
| 144 |
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|
| 145 |
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|
| 146 |
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|
| 147 |
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|
| 148 |
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}
|
| 149 |
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}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0045_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
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"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "busia_schistosomiasis_s0045_label_positive_jitter",
|
| 6 |
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"aoi_id": "busia_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
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"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Kenya",
|
| 11 |
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"name": "Busia County, Kenya",
|
| 12 |
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"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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|
| 14 |
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|
| 15 |
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|
| 16 |
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|
| 17 |
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|
| 18 |
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| 19 |
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| 20 |
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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],
|
| 25 |
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| 26 |
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|
| 27 |
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|
| 28 |
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|
| 29 |
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|
| 30 |
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],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/busia_schistosomiasis/busia_schistosomiasis_s0045_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "697aa0b1ff063698c101f929aef8011512d9b4f251184af2a5196fb56fe94c6e",
|
| 34 |
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|
| 35 |
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|
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},
|
| 37 |
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|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
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"simsat_raw_dir": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0045_label_positive_jitter",
|
| 40 |
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"sentinel_rgb": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0045_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
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"sentinel_false_color": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0045_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
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"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0045_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
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"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0045_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
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"mapbox_satellite": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0045_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
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|
| 46 |
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|
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|
| 50 |
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|
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|
| 55 |
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|
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| 57 |
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|
| 58 |
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| 59 |
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|
| 60 |
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|
| 61 |
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|
| 62 |
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|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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| 66 |
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|
| 67 |
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|
| 68 |
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|
| 69 |
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|
| 70 |
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"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
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|
| 72 |
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|
| 73 |
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| 74 |
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|
| 75 |
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| 77 |
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| 81 |
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| 82 |
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| 83 |
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|
| 108 |
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| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 0,
|
| 122 |
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"major_roads": 135,
|
| 123 |
+
"schools_waterpoints": 0,
|
| 124 |
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"urban_landuse": 839,
|
| 125 |
+
"water_surface": 0,
|
| 126 |
+
"waterways": 0
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
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"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 18,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0047_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
|
|
|
|
|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
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|
|
|
|
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|
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|
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|
|
|
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|
|
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|
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|
|
|
|
|
|
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|
|
|
|
|
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|
|
|
|
|
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|
|
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|
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|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "busia_schistosomiasis_s0047_label_positive_jitter",
|
| 6 |
+
"aoi_id": "busia_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Kenya",
|
| 11 |
+
"name": "Busia County, Kenya",
|
| 12 |
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"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 34.3662346550034,
|
| 17 |
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"lat": 0.21641731798963057
|
| 18 |
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},
|
| 19 |
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"bbox": [
|
| 20 |
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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],
|
| 25 |
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"panel_order": [
|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
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"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/busia_schistosomiasis/busia_schistosomiasis_s0047_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "ad9e4813b15a1877ca2043b932fc3621dc0add4a8781f665c906156a0b3f20a7",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
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"simsat_raw_dir": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0047_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0047_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0047_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0047_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0047_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
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"mapbox_satellite": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0047_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
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"mapbox_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0047_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
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"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/busia_kenya/busia_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/busia_kenya/busia_worldpop_2025_constrained_100m.tif",
|
| 50 |
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"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/busia_kenya/busia_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/busia_kenya/busia_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/busia_kenya/busia_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/busia_kenya/busia_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/busia_kenya/osm_health_facilities_busia.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/busia_kenya/osm_major_roads_busia.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/busia_kenya/osm_schools_waterpoints_busia.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/busia_kenya/osm_urban_landuse_busia.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/busia_kenya/osm_water_surface_busia.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/busia_kenya/osm_waterways_busia.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
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|
| 67 |
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]
|
| 68 |
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}
|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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|
| 75 |
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|
| 76 |
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|
| 77 |
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|
| 78 |
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"sentinel_datetime": "2025-12-08T08:10:14Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
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|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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|
| 83 |
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|
| 84 |
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|
| 85 |
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|
| 86 |
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|
| 87 |
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|
| 88 |
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|
| 89 |
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|
| 90 |
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|
| 91 |
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|
| 92 |
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|
| 93 |
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|
| 94 |
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|
| 95 |
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|
| 96 |
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|
| 97 |
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|
| 98 |
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|
| 99 |
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|
| 100 |
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|
| 101 |
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|
| 102 |
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|
| 103 |
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|
| 104 |
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|
| 105 |
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|
| 106 |
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|
| 107 |
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|
| 108 |
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"valid_pixels": 0
|
| 109 |
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},
|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
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|
| 112 |
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|
| 113 |
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"jrc_gsw_transitions": {
|
| 114 |
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|
| 115 |
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|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
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|
| 118 |
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}
|
| 119 |
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},
|
| 120 |
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"osm_counts": {
|
| 121 |
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|
| 122 |
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|
| 123 |
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|
| 124 |
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|
| 125 |
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|
| 126 |
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|
| 127 |
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},
|
| 128 |
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|
| 129 |
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|
| 130 |
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|
| 131 |
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|
| 132 |
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|
| 133 |
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}
|
| 134 |
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},
|
| 135 |
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"label_quality": {
|
| 136 |
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"tier": "weak_label_positive",
|
| 137 |
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"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
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},
|
| 139 |
+
"license_flags": {
|
| 140 |
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"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
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},
|
| 145 |
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"sampling": {
|
| 146 |
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"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0048_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
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|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "busia_schistosomiasis_s0048_label_positive_jitter",
|
| 6 |
+
"aoi_id": "busia_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Kenya",
|
| 11 |
+
"name": "Busia County, Kenya",
|
| 12 |
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"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 34.37384386736743,
|
| 17 |
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"lat": 0.20332426890094518
|
| 18 |
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},
|
| 19 |
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"bbox": [
|
| 20 |
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| 28 |
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| 29 |
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|
| 30 |
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| 31 |
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|
| 32 |
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"path": "image_packets/busia_schistosomiasis/busia_schistosomiasis_s0048_label_positive_jitter_packet.png",
|
| 33 |
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|
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|
| 41 |
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|
| 42 |
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"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0048_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
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"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0048_label_positive_jitter/sentinel_metadata.json",
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| 44 |
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| 45 |
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|
| 55 |
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|
| 57 |
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| 58 |
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| 59 |
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|
| 60 |
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| 61 |
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| 62 |
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|
| 63 |
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|
| 64 |
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|
| 65 |
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|
| 66 |
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|
| 67 |
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|
| 68 |
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|
| 69 |
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|
| 70 |
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"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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|
| 75 |
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|
| 76 |
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| 77 |
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|
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|
| 79 |
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| 80 |
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|
| 81 |
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|
| 83 |
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|
| 84 |
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| 85 |
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| 86 |
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| 87 |
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| 88 |
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| 89 |
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|
| 90 |
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| 91 |
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| 92 |
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| 93 |
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| 94 |
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|
| 95 |
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| 97 |
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| 98 |
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| 99 |
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|
| 100 |
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| 101 |
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|
| 102 |
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| 103 |
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|
| 104 |
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|
| 105 |
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|
| 106 |
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| 109 |
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"jrc_gsw_seasonality": {
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| 111 |
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|
| 112 |
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|
| 113 |
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"jrc_gsw_transitions": {
|
| 114 |
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|
| 115 |
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|
| 116 |
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"jrc_gsw_extent": {
|
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|
| 125 |
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|
| 126 |
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|
| 127 |
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|
| 128 |
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"label_counts": {
|
| 129 |
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"vector_label": 0,
|
| 130 |
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|
| 131 |
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|
| 132 |
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|
| 133 |
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|
| 134 |
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|
| 135 |
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|
| 136 |
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"tier": "weak_label_positive",
|
| 137 |
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|
| 138 |
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},
|
| 139 |
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|
| 140 |
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|
| 141 |
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|
| 142 |
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|
| 143 |
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|
| 144 |
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},
|
| 145 |
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"sampling": {
|
| 146 |
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"sample_type": "label_positive_jitter",
|
| 147 |
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"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0049_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "busia_schistosomiasis_s0049_label_positive_jitter",
|
| 6 |
+
"aoi_id": "busia_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Kenya",
|
| 11 |
+
"name": "Busia County, Kenya",
|
| 12 |
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"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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"chip_size_km": 5.0,
|
| 14 |
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|
| 15 |
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|
| 16 |
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|
| 17 |
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|
| 18 |
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|
| 19 |
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|
| 20 |
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|
| 21 |
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|
| 22 |
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| 23 |
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|
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],
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| 25 |
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| 26 |
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|
| 27 |
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|
| 28 |
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|
| 29 |
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|
| 30 |
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],
|
| 31 |
+
"image_packet": {
|
| 32 |
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"path": "image_packets/busia_schistosomiasis/busia_schistosomiasis_s0049_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "2278dc9f4d54e6ff018433ba6a9e9b37f28b722d3776ce9e61b157b3d118b4fa",
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| 34 |
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|
| 35 |
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| 37 |
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|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
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"simsat_raw_dir": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0049_label_positive_jitter",
|
| 40 |
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|
| 41 |
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"sentinel_false_color": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0049_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
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"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0049_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
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"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0049_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
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"mapbox_satellite": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0049_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
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"mapbox_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0049_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
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|
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|
| 49 |
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|
| 50 |
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| 51 |
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| 52 |
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| 53 |
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| 54 |
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|
| 55 |
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| 56 |
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| 57 |
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| 58 |
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| 59 |
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|
| 60 |
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|
| 61 |
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"water_surface": "data/raw/osm/busia_kenya/osm_water_surface_busia.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/busia_kenya/osm_waterways_busia.overpass.json"
|
| 63 |
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|
| 64 |
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"labels": {
|
| 65 |
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"gbif_intermediate_host": [
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| 66 |
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|
| 67 |
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]
|
| 68 |
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|
| 69 |
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|
| 70 |
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"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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|
| 73 |
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"quality": {
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| 74 |
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|
| 75 |
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| 76 |
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| 77 |
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|
| 78 |
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|
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|
| 81 |
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| 83 |
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| 95 |
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|
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|
| 108 |
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| 109 |
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|
| 111 |
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| 112 |
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|
| 114 |
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|
| 115 |
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|
| 116 |
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|
| 117 |
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|
| 118 |
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|
| 119 |
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|
| 120 |
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|
| 121 |
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|
| 122 |
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|
| 123 |
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|
| 124 |
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|
| 125 |
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|
| 126 |
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|
| 127 |
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|
| 128 |
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|
| 129 |
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|
| 130 |
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|
| 131 |
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|
| 132 |
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|
| 133 |
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|
| 134 |
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|
| 135 |
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"label_quality": {
|
| 136 |
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"tier": "weak_label_positive",
|
| 137 |
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"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
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},
|
| 139 |
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"license_flags": {
|
| 140 |
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"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
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|
| 145 |
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"sampling": {
|
| 146 |
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"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0050_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
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|
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|
|
|
|
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|
|
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|
|
|
|
|
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|
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|
|
|
|
|
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|
|
|
|
|
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|
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|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
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|
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|
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|
|
|
|
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|
|
|
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|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
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|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
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|
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|
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|
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|
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|
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|
| 1 |
+
{
|
| 2 |
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"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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|
| 4 |
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"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
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|
| 6 |
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|
| 7 |
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|
| 8 |
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|
| 9 |
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|
| 10 |
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|
| 11 |
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|
| 12 |
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|
| 13 |
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|
| 14 |
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|
| 15 |
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|
| 16 |
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| 17 |
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| 18 |
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| 19 |
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| 20 |
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| 24 |
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| 25 |
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|
| 26 |
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|
| 27 |
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|
| 28 |
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|
| 29 |
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|
| 30 |
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|
| 31 |
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|
| 32 |
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|
| 33 |
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| 34 |
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|
| 35 |
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| 36 |
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|
| 37 |
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|
| 38 |
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|
| 39 |
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|
| 40 |
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|
| 41 |
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|
| 42 |
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"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0050_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
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"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0050_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
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"mapbox_satellite": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0050_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
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|
| 46 |
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|
| 47 |
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|
| 48 |
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|
| 49 |
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|
| 50 |
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|
| 51 |
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|
| 52 |
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|
| 53 |
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| 54 |
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|
| 55 |
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|
| 56 |
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|
| 57 |
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|
| 58 |
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|
| 59 |
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|
| 60 |
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|
| 61 |
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|
| 62 |
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| 63 |
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|
| 64 |
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|
| 65 |
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|
| 66 |
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|
| 67 |
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|
| 68 |
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|
| 69 |
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|
| 70 |
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| 71 |
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|
| 72 |
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| 73 |
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| 74 |
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| 75 |
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| 76 |
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| 77 |
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| 78 |
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| 79 |
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| 80 |
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| 81 |
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| 82 |
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| 83 |
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| 84 |
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| 93 |
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| 95 |
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| 109 |
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|
| 121 |
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|
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|
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| 129 |
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|
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|
| 132 |
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|
| 133 |
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|
| 134 |
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|
| 135 |
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|
| 136 |
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|
| 137 |
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| 138 |
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|
| 139 |
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|
| 140 |
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|
| 141 |
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|
| 142 |
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|
| 143 |
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|
| 144 |
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|
| 145 |
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|
| 146 |
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|
| 147 |
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|
| 148 |
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}
|
| 149 |
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}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0051_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
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|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
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|
|
|
|
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|
|
|
|
|
|
|
|
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|
|
|
|
|
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|
|
|
|
|
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|
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|
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|
|
|
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|
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|
|
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|
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|
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|
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|
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|
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|
|
| 1 |
+
{
|
| 2 |
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"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
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"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
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"chip_id": "busia_schistosomiasis_s0051_label_positive_jitter",
|
| 6 |
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"aoi_id": "busia_schistosomiasis",
|
| 7 |
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"split": "train",
|
| 8 |
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"disease_module": "schistosomiasis",
|
| 9 |
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"primary_disease": "schistosomiasis",
|
| 10 |
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"country": "Kenya",
|
| 11 |
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"name": "Busia County, Kenya",
|
| 12 |
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"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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|
| 14 |
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|
| 15 |
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|
| 16 |
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| 17 |
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| 18 |
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| 19 |
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| 20 |
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|
| 25 |
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| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/busia_schistosomiasis/busia_schistosomiasis_s0051_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "c74c759f92fbdce442399c99660a3e51d38bba59045152d67e72559807c8164e",
|
| 34 |
+
"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0051_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0051_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0051_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0051_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0051_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0051_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0051_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/busia_kenya/busia_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/busia_kenya/busia_worldpop_2025_constrained_100m.tif",
|
| 50 |
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"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/busia_kenya/busia_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/busia_kenya/busia_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/busia_kenya/busia_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/busia_kenya/busia_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/busia_kenya/osm_health_facilities_busia.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/busia_kenya/osm_major_roads_busia.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/busia_kenya/osm_schools_waterpoints_busia.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/busia_kenya/osm_urban_landuse_busia.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/busia_kenya/osm_water_surface_busia.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/busia_kenya/osm_waterways_busia.overpass.json"
|
| 63 |
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},
|
| 64 |
+
"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/busia_kenya/gbif_freshwater_snails_busia_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 0.531272,
|
| 78 |
+
"sentinel_datetime": "2025-12-08T08:10:14Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 62.0844,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
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"min": 8.0427,
|
| 91 |
+
"max": 9.671,
|
| 92 |
+
"mean": 8.7927,
|
| 93 |
+
"median": 8.7844,
|
| 94 |
+
"p90": 9.3526
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 261332,
|
| 101 |
+
"min": 0.0001,
|
| 102 |
+
"max": 19.7366,
|
| 103 |
+
"mean": 2.7189,
|
| 104 |
+
"median": 1.6398,
|
| 105 |
+
"p90": 6.1492
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 0,
|
| 122 |
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"major_roads": 140,
|
| 123 |
+
"schools_waterpoints": 0,
|
| 124 |
+
"urban_landuse": 899,
|
| 125 |
+
"water_surface": 0,
|
| 126 |
+
"waterways": 0
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 18,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0053_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "busia_schistosomiasis_s0053_label_positive_jitter",
|
| 6 |
+
"aoi_id": "busia_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Kenya",
|
| 11 |
+
"name": "Busia County, Kenya",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 34.366897966186286,
|
| 17 |
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"lat": 0.21418054673035497
|
| 18 |
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},
|
| 19 |
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"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
34.389381163422016,
|
| 23 |
+
0.23666358687832323
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/busia_schistosomiasis/busia_schistosomiasis_s0053_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "23535e2e2f747bf1e61005a0dc2041aa51449a7580d5c8590bbe36760b7debe1",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0053_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0053_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0053_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
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"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0053_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0053_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0053_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0053_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
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"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/busia_kenya/busia_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/busia_kenya/busia_worldpop_2025_constrained_100m.tif",
|
| 50 |
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"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/busia_kenya/busia_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/busia_kenya/busia_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/busia_kenya/busia_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/busia_kenya/busia_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/busia_kenya/osm_health_facilities_busia.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/busia_kenya/osm_major_roads_busia.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/busia_kenya/osm_schools_waterpoints_busia.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/busia_kenya/osm_urban_landuse_busia.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/busia_kenya/osm_water_surface_busia.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/busia_kenya/osm_waterways_busia.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
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|
| 67 |
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]
|
| 68 |
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}
|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 0.531272,
|
| 78 |
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"sentinel_datetime": "2025-12-08T08:10:14Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 62.1844,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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|
| 90 |
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"min": 8.0424,
|
| 91 |
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|
| 92 |
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|
| 93 |
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"median": 8.8342,
|
| 94 |
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"p90": 9.4166
|
| 95 |
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|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 261581,
|
| 101 |
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|
| 102 |
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|
| 103 |
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|
| 104 |
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|
| 105 |
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"p90": 6.0501
|
| 106 |
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|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
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"valid_pixels": 0
|
| 109 |
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},
|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
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"valid_pixels": 0
|
| 112 |
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},
|
| 113 |
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"jrc_gsw_transitions": {
|
| 114 |
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|
| 115 |
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},
|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
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|
| 118 |
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}
|
| 119 |
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},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 0,
|
| 122 |
+
"major_roads": 146,
|
| 123 |
+
"schools_waterpoints": 0,
|
| 124 |
+
"urban_landuse": 857,
|
| 125 |
+
"water_surface": 0,
|
| 126 |
+
"waterways": 0
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 18,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0056_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "busia_schistosomiasis_s0056_label_positive_jitter",
|
| 6 |
+
"aoi_id": "busia_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Kenya",
|
| 11 |
+
"name": "Busia County, Kenya",
|
| 12 |
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"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 34.3674483700699,
|
| 17 |
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"lat": 0.2171825967057541
|
| 18 |
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},
|
| 19 |
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"bbox": [
|
| 20 |
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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],
|
| 25 |
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"panel_order": [
|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
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"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/busia_schistosomiasis/busia_schistosomiasis_s0056_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "4de4c59802b5e1d97d6f2256f183d6c672993086fcbdf5cd29ef263ed46329e0",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0056_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0056_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0056_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0056_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0056_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0056_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0056_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/busia_kenya/busia_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/busia_kenya/busia_worldpop_2025_constrained_100m.tif",
|
| 50 |
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"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/busia_kenya/busia_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/busia_kenya/busia_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/busia_kenya/busia_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/busia_kenya/busia_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/busia_kenya/osm_health_facilities_busia.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/busia_kenya/osm_major_roads_busia.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/busia_kenya/osm_schools_waterpoints_busia.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/busia_kenya/osm_urban_landuse_busia.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/busia_kenya/osm_water_surface_busia.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/busia_kenya/osm_waterways_busia.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
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"data/raw/map_gbif/busia_kenya/gbif_freshwater_snails_busia_occurrences.csv"
|
| 67 |
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]
|
| 68 |
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}
|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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|
| 77 |
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"sentinel_cloud_cover_percent": 0.531272,
|
| 78 |
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"sentinel_datetime": "2025-12-08T08:10:14Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 62.0568,
|
| 84 |
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|
| 85 |
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|
| 86 |
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"numeric_features": {
|
| 87 |
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|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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|
| 90 |
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|
| 91 |
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|
| 92 |
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|
| 93 |
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|
| 94 |
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|
| 95 |
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|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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|
| 101 |
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|
| 102 |
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|
| 103 |
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|
| 104 |
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"median": 1.6083,
|
| 105 |
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|
| 106 |
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|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
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"valid_pixels": 0
|
| 109 |
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},
|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
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"valid_pixels": 0
|
| 112 |
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},
|
| 113 |
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"jrc_gsw_transitions": {
|
| 114 |
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"valid_pixels": 0
|
| 115 |
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},
|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
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"valid_pixels": 0
|
| 118 |
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}
|
| 119 |
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},
|
| 120 |
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"osm_counts": {
|
| 121 |
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|
| 122 |
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|
| 123 |
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|
| 124 |
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"urban_landuse": 863,
|
| 125 |
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|
| 126 |
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"waterways": 0
|
| 127 |
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},
|
| 128 |
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"label_counts": {
|
| 129 |
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"vector_label": 0,
|
| 130 |
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"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 18,
|
| 132 |
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"disease_aggregate": 0
|
| 133 |
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}
|
| 134 |
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},
|
| 135 |
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"label_quality": {
|
| 136 |
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"tier": "weak_label_positive",
|
| 137 |
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"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
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},
|
| 139 |
+
"license_flags": {
|
| 140 |
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"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
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},
|
| 145 |
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"sampling": {
|
| 146 |
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"sample_type": "label_positive_jitter",
|
| 147 |
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"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0057_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "busia_schistosomiasis_s0057_label_positive_jitter",
|
| 6 |
+
"aoi_id": "busia_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Kenya",
|
| 11 |
+
"name": "Busia County, Kenya",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 34.36836592761854,
|
| 17 |
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"lat": 0.21340571622359958
|
| 18 |
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},
|
| 19 |
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"bbox": [
|
| 20 |
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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],
|
| 25 |
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"panel_order": [
|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/busia_schistosomiasis/busia_schistosomiasis_s0057_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "9e2bcb56f05025074d5aa8fb485d1208c9422fea8f90fa6d30a6534a41b33181",
|
| 34 |
+
"width": 1024,
|
| 35 |
+
"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0057_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0057_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0057_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0057_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0057_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0057_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0057_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/busia_kenya/busia_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/busia_kenya/busia_worldpop_2025_constrained_100m.tif",
|
| 50 |
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"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/busia_kenya/busia_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/busia_kenya/busia_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/busia_kenya/busia_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/busia_kenya/busia_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/busia_kenya/osm_health_facilities_busia.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/busia_kenya/osm_major_roads_busia.overpass.json",
|
| 59 |
+
"schools_waterpoints": "data/raw/osm/busia_kenya/osm_schools_waterpoints_busia.overpass.json",
|
| 60 |
+
"urban_landuse": "data/raw/osm/busia_kenya/osm_urban_landuse_busia.overpass.json",
|
| 61 |
+
"water_surface": "data/raw/osm/busia_kenya/osm_water_surface_busia.overpass.json",
|
| 62 |
+
"waterways": "data/raw/osm/busia_kenya/osm_waterways_busia.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/busia_kenya/gbif_freshwater_snails_busia_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
+
"mapbox_available": true,
|
| 77 |
+
"sentinel_cloud_cover_percent": 0.531272,
|
| 78 |
+
"sentinel_datetime": "2025-12-08T08:10:14Z",
|
| 79 |
+
"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
+
"sampling_strategy": "label_positive_jitter",
|
| 83 |
+
"packet_std": 62.1484,
|
| 84 |
+
"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
+
"numeric_features": {
|
| 87 |
+
"raster_stats": {
|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
+
"min": 8.0423,
|
| 91 |
+
"max": 9.7254,
|
| 92 |
+
"mean": 8.8396,
|
| 93 |
+
"median": 8.828,
|
| 94 |
+
"p90": 9.4268
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 261662,
|
| 101 |
+
"min": 0.0002,
|
| 102 |
+
"max": 19.7977,
|
| 103 |
+
"mean": 2.8435,
|
| 104 |
+
"median": 1.6964,
|
| 105 |
+
"p90": 6.4478
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 0,
|
| 122 |
+
"major_roads": 138,
|
| 123 |
+
"schools_waterpoints": 0,
|
| 124 |
+
"urban_landuse": 1018,
|
| 125 |
+
"water_surface": 0,
|
| 126 |
+
"waterways": 0
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 18,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0058_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "busia_schistosomiasis_s0058_label_positive_jitter",
|
| 6 |
+
"aoi_id": "busia_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Kenya",
|
| 11 |
+
"name": "Busia County, Kenya",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 34.2087217272977,
|
| 17 |
+
"lat": 0.4175619609260024
|
| 18 |
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},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
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|
| 22 |
+
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|
| 23 |
+
0.44004500107397065
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/busia_schistosomiasis/busia_schistosomiasis_s0058_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "4302c0f1c3b9c45eead977b34893854bbf9a7b856e3c7e48c51fcbcc6ae3ce19",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0058_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0058_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0058_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0058_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0058_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0058_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0058_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/busia_kenya/busia_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/busia_kenya/busia_worldpop_2025_constrained_100m.tif",
|
| 50 |
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"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/busia_kenya/busia_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/busia_kenya/busia_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/busia_kenya/busia_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/busia_kenya/busia_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/busia_kenya/osm_health_facilities_busia.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/busia_kenya/osm_major_roads_busia.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/busia_kenya/osm_schools_waterpoints_busia.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/busia_kenya/osm_urban_landuse_busia.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/busia_kenya/osm_water_surface_busia.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/busia_kenya/osm_waterways_busia.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
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|
| 67 |
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]
|
| 68 |
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}
|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 0.531272,
|
| 78 |
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"sentinel_datetime": "2025-12-08T08:10:14Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 60.9411,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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|
| 90 |
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"min": 5.8717,
|
| 91 |
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|
| 92 |
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|
| 93 |
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|
| 94 |
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|
| 95 |
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|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 253320,
|
| 101 |
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|
| 102 |
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|
| 103 |
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|
| 104 |
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|
| 105 |
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|
| 106 |
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|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
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"valid_pixels": 0
|
| 109 |
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},
|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
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"valid_pixels": 0
|
| 112 |
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},
|
| 113 |
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"jrc_gsw_transitions": {
|
| 114 |
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|
| 115 |
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|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
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|
| 118 |
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}
|
| 119 |
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},
|
| 120 |
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"osm_counts": {
|
| 121 |
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|
| 122 |
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|
| 123 |
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"schools_waterpoints": 7,
|
| 124 |
+
"urban_landuse": 2,
|
| 125 |
+
"water_surface": 0,
|
| 126 |
+
"waterways": 1
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 5,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
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"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0060_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
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"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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|
| 4 |
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"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
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"chip_id": "busia_schistosomiasis_s0060_label_positive_jitter",
|
| 6 |
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|
| 7 |
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|
| 8 |
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|
| 9 |
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|
| 10 |
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|
| 11 |
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|
| 12 |
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|
| 13 |
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|
| 14 |
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|
| 15 |
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|
| 16 |
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|
| 17 |
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|
| 18 |
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| 19 |
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|
| 20 |
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| 21 |
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|
| 22 |
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| 24 |
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| 25 |
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|
| 26 |
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|
| 27 |
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|
| 28 |
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|
| 29 |
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|
| 30 |
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],
|
| 31 |
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"image_packet": {
|
| 32 |
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"path": "image_packets/busia_schistosomiasis/busia_schistosomiasis_s0060_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "8a62713eb3f40cda7cb5a28894e98862ff9f733ec80ae5333317c2952fda9ce6",
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| 34 |
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|
| 35 |
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| 36 |
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|
| 37 |
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"source_assets": {
|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
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"simsat_raw_dir": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0060_label_positive_jitter",
|
| 40 |
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"sentinel_rgb": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0060_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
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"sentinel_false_color": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0060_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
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"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0060_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
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"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0060_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
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"mapbox_satellite": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0060_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
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"mapbox_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0060_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
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"source_layers": {
|
| 47 |
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|
| 48 |
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|
| 49 |
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"population_worldpop": "data/raw/worldpop/busia_kenya/busia_worldpop_2025_constrained_100m.tif",
|
| 50 |
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"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/busia_kenya/busia_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/busia_kenya/busia_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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|
| 54 |
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|
| 55 |
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|
| 56 |
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|
| 57 |
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|
| 58 |
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|
| 59 |
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|
| 60 |
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| 61 |
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|
| 62 |
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| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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| 66 |
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|
| 67 |
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]
|
| 68 |
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|
| 69 |
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|
| 70 |
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|
| 71 |
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|
| 72 |
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|
| 73 |
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| 74 |
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| 75 |
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| 76 |
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|
| 77 |
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| 78 |
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| 79 |
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| 80 |
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| 81 |
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| 82 |
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| 83 |
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| 95 |
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| 108 |
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| 109 |
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|
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| 114 |
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| 115 |
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| 116 |
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| 118 |
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|
| 119 |
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|
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|
| 121 |
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| 122 |
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|
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|
| 124 |
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|
| 125 |
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|
| 126 |
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| 127 |
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|
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|
| 129 |
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| 130 |
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|
| 131 |
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|
| 132 |
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|
| 133 |
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|
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| 135 |
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|
| 136 |
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|
| 137 |
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| 138 |
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|
| 139 |
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|
| 140 |
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|
| 141 |
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|
| 142 |
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|
| 143 |
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|
| 144 |
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|
| 145 |
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|
| 146 |
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|
| 147 |
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|
| 148 |
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}
|
| 149 |
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}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0061_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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|
| 4 |
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"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
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"chip_id": "busia_schistosomiasis_s0061_label_positive_jitter",
|
| 6 |
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"aoi_id": "busia_schistosomiasis",
|
| 7 |
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"split": "train",
|
| 8 |
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"disease_module": "schistosomiasis",
|
| 9 |
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"primary_disease": "schistosomiasis",
|
| 10 |
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"country": "Kenya",
|
| 11 |
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"name": "Busia County, Kenya",
|
| 12 |
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"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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|
| 14 |
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|
| 15 |
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|
| 16 |
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|
| 17 |
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|
| 18 |
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|
| 19 |
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|
| 20 |
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|
| 21 |
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|
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|
| 23 |
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|
| 25 |
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"panel_order": [
|
| 26 |
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|
| 27 |
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|
| 28 |
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|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/busia_schistosomiasis/busia_schistosomiasis_s0061_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "48e66b6dd440b0cb18c68578740fed0ca8ed7ecf0e24ed49e909f3fb4630b236",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0061_label_positive_jitter",
|
| 40 |
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"sentinel_rgb": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0061_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0061_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0061_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0061_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0061_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0061_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
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"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/busia_kenya/busia_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/busia_kenya/busia_worldpop_2025_constrained_100m.tif",
|
| 50 |
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"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/busia_kenya/busia_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/busia_kenya/busia_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/busia_kenya/busia_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/busia_kenya/busia_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/busia_kenya/osm_health_facilities_busia.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/busia_kenya/osm_major_roads_busia.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/busia_kenya/osm_schools_waterpoints_busia.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/busia_kenya/osm_urban_landuse_busia.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/busia_kenya/osm_water_surface_busia.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/busia_kenya/osm_waterways_busia.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
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"data/raw/map_gbif/busia_kenya/gbif_freshwater_snails_busia_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
+
"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 0.531272,
|
| 78 |
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"sentinel_datetime": "2025-12-08T08:10:14Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 62.0593,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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|
| 88 |
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|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
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"min": 8.0423,
|
| 91 |
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"max": 9.6701,
|
| 92 |
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"mean": 8.789,
|
| 93 |
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"median": 8.7759,
|
| 94 |
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"p90": 9.3499
|
| 95 |
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},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
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"valid_pixels": 261404,
|
| 101 |
+
"min": 0.0001,
|
| 102 |
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"max": 19.9617,
|
| 103 |
+
"mean": 2.7785,
|
| 104 |
+
"median": 1.6561,
|
| 105 |
+
"p90": 6.3533
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
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}
|
| 119 |
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},
|
| 120 |
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"osm_counts": {
|
| 121 |
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|
| 122 |
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"major_roads": 138,
|
| 123 |
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|
| 124 |
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"urban_landuse": 980,
|
| 125 |
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|
| 126 |
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"waterways": 0
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
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"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 18,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0065_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "busia_schistosomiasis_s0065_label_positive_jitter",
|
| 6 |
+
"aoi_id": "busia_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Kenya",
|
| 11 |
+
"name": "Busia County, Kenya",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 34.1991688698247,
|
| 17 |
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"lat": 0.4197406014880082
|
| 18 |
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},
|
| 19 |
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"bbox": [
|
| 20 |
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|
| 21 |
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|
| 22 |
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|
| 23 |
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0.44222364163597644
|
| 24 |
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],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/busia_schistosomiasis/busia_schistosomiasis_s0065_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "5548c8dd44d8b26934a6d12f5f7f51ecf390ba00968cacab7c4c159efcf54696",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0065_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0065_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0065_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0065_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0065_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0065_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0065_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
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"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/busia_kenya/busia_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/busia_kenya/busia_worldpop_2025_constrained_100m.tif",
|
| 50 |
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"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/busia_kenya/busia_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/busia_kenya/busia_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/busia_kenya/busia_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/busia_kenya/busia_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/busia_kenya/osm_health_facilities_busia.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/busia_kenya/osm_major_roads_busia.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/busia_kenya/osm_schools_waterpoints_busia.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/busia_kenya/osm_urban_landuse_busia.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/busia_kenya/osm_water_surface_busia.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/busia_kenya/osm_waterways_busia.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
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|
| 67 |
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]
|
| 68 |
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}
|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 0.531272,
|
| 78 |
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"sentinel_datetime": "2025-12-08T08:10:14Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 60.89,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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|
| 88 |
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|
| 89 |
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|
| 90 |
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|
| 91 |
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|
| 92 |
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|
| 93 |
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|
| 94 |
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|
| 95 |
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|
| 96 |
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|
| 97 |
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| 98 |
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|
| 99 |
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|
| 100 |
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|
| 101 |
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|
| 102 |
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|
| 103 |
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|
| 104 |
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|
| 105 |
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|
| 106 |
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|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
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|
| 109 |
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|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
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|
| 112 |
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|
| 113 |
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|
| 114 |
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|
| 115 |
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|
| 116 |
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|
| 117 |
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|
| 118 |
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|
| 119 |
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},
|
| 120 |
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|
| 121 |
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|
| 122 |
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|
| 123 |
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|
| 124 |
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|
| 125 |
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|
| 126 |
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|
| 127 |
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},
|
| 128 |
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"label_counts": {
|
| 129 |
+
"vector_label": 0,
|
| 130 |
+
"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 5,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0066_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "busia_schistosomiasis_s0066_label_positive_jitter",
|
| 6 |
+
"aoi_id": "busia_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Kenya",
|
| 11 |
+
"name": "Busia County, Kenya",
|
| 12 |
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"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 34.20527660877717,
|
| 17 |
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"lat": 0.41861000988367575
|
| 18 |
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},
|
| 19 |
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"bbox": [
|
| 20 |
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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],
|
| 25 |
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"panel_order": [
|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
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"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
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"bottom_left: Mapbox satellite context",
|
| 29 |
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"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
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"path": "image_packets/busia_schistosomiasis/busia_schistosomiasis_s0066_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "0f16d0999c2493d07d3a30adc6b01d9326cb273d55c7d6a8f9284fc92a09ab7b",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
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"simsat_raw_dir": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0066_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0066_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0066_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0066_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0066_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0066_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0066_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
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"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/busia_kenya/busia_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/busia_kenya/busia_worldpop_2025_constrained_100m.tif",
|
| 50 |
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"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/busia_kenya/busia_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/busia_kenya/busia_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/busia_kenya/busia_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/busia_kenya/busia_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/busia_kenya/osm_health_facilities_busia.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/busia_kenya/osm_major_roads_busia.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/busia_kenya/osm_schools_waterpoints_busia.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/busia_kenya/osm_urban_landuse_busia.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/busia_kenya/osm_water_surface_busia.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/busia_kenya/osm_waterways_busia.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
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"data/raw/map_gbif/busia_kenya/gbif_freshwater_snails_busia_occurrences.csv"
|
| 67 |
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]
|
| 68 |
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}
|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 0.531272,
|
| 78 |
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"sentinel_datetime": "2025-12-08T08:10:14Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 60.9268,
|
| 84 |
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|
| 85 |
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|
| 86 |
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"numeric_features": {
|
| 87 |
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|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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|
| 90 |
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|
| 91 |
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|
| 92 |
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"mean": 6.5065,
|
| 93 |
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|
| 94 |
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|
| 95 |
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|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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| 98 |
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|
| 99 |
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"population_worldpop": {
|
| 100 |
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|
| 101 |
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|
| 102 |
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"max": 21.0277,
|
| 103 |
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|
| 104 |
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"median": 1.8462,
|
| 105 |
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"p90": 6.5192
|
| 106 |
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| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
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"valid_pixels": 0
|
| 109 |
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},
|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
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"valid_pixels": 0
|
| 112 |
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|
| 113 |
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"jrc_gsw_transitions": {
|
| 114 |
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"valid_pixels": 0
|
| 115 |
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|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
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"valid_pixels": 0
|
| 118 |
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}
|
| 119 |
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},
|
| 120 |
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"osm_counts": {
|
| 121 |
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"health_facilities": 0,
|
| 122 |
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"major_roads": 28,
|
| 123 |
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"schools_waterpoints": 3,
|
| 124 |
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"urban_landuse": 11,
|
| 125 |
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"water_surface": 0,
|
| 126 |
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"waterways": 1
|
| 127 |
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},
|
| 128 |
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"label_counts": {
|
| 129 |
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"vector_label": 0,
|
| 130 |
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"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 5,
|
| 132 |
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"disease_aggregate": 0
|
| 133 |
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}
|
| 134 |
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},
|
| 135 |
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"label_quality": {
|
| 136 |
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"tier": "weak_label_positive",
|
| 137 |
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"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
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},
|
| 139 |
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"license_flags": {
|
| 140 |
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"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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|
| 142 |
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|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
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|
| 145 |
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"sampling": {
|
| 146 |
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"sample_type": "label_positive_jitter",
|
| 147 |
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"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0067_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
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"chip_id": "busia_schistosomiasis_s0067_label_positive_jitter",
|
| 6 |
+
"aoi_id": "busia_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
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"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Kenya",
|
| 11 |
+
"name": "Busia County, Kenya",
|
| 12 |
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"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 34.365260408119134,
|
| 17 |
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"lat": 0.21628935718795797
|
| 18 |
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},
|
| 19 |
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"bbox": [
|
| 20 |
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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],
|
| 25 |
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"panel_order": [
|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
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|
| 28 |
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"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/busia_schistosomiasis/busia_schistosomiasis_s0067_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "4b1bc8a923d6ddb6feeeb2ea83530fe1aa4cea1dc95dcef4ff01e0449528019a",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
+
},
|
| 37 |
+
"source_assets": {
|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0067_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0067_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0067_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0067_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0067_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0067_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0067_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/busia_kenya/busia_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/busia_kenya/busia_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/busia_kenya/busia_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/busia_kenya/busia_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/busia_kenya/busia_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/busia_kenya/busia_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/busia_kenya/osm_health_facilities_busia.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/busia_kenya/osm_major_roads_busia.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/busia_kenya/osm_schools_waterpoints_busia.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/busia_kenya/osm_urban_landuse_busia.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/busia_kenya/osm_water_surface_busia.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/busia_kenya/osm_waterways_busia.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
+
"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/busia_kenya/gbif_freshwater_snails_busia_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
+
},
|
| 73 |
+
"quality": {
|
| 74 |
+
"evidence_packet_available": true,
|
| 75 |
+
"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 0.531272,
|
| 78 |
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"sentinel_datetime": "2025-12-08T08:10:14Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
+
"mapbox_target_visible": true,
|
| 81 |
+
"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 62.125,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
+
},
|
| 86 |
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"numeric_features": {
|
| 87 |
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|
| 88 |
+
"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
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"min": 8.0431,
|
| 91 |
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"max": 9.6774,
|
| 92 |
+
"mean": 8.8089,
|
| 93 |
+
"median": 8.8157,
|
| 94 |
+
"p90": 9.3646
|
| 95 |
+
},
|
| 96 |
+
"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
+
},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
+
"valid_pixels": 261332,
|
| 101 |
+
"min": 0.0001,
|
| 102 |
+
"max": 15.558,
|
| 103 |
+
"mean": 2.5297,
|
| 104 |
+
"median": 1.5827,
|
| 105 |
+
"p90": 5.6378
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
+
"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
+
},
|
| 120 |
+
"osm_counts": {
|
| 121 |
+
"health_facilities": 0,
|
| 122 |
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"major_roads": 157,
|
| 123 |
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"schools_waterpoints": 0,
|
| 124 |
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"urban_landuse": 692,
|
| 125 |
+
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|
| 126 |
+
"waterways": 0
|
| 127 |
+
},
|
| 128 |
+
"label_counts": {
|
| 129 |
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"vector_label": 0,
|
| 130 |
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"disease_label": 0,
|
| 131 |
+
"intermediate_host_label": 18,
|
| 132 |
+
"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0072_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
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|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "busia_schistosomiasis_s0072_label_positive_jitter",
|
| 6 |
+
"aoi_id": "busia_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Kenya",
|
| 11 |
+
"name": "Busia County, Kenya",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 34.37348785169408,
|
| 17 |
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"lat": 0.20851857966335888
|
| 18 |
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},
|
| 19 |
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"bbox": [
|
| 20 |
+
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|
| 21 |
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|
| 22 |
+
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|
| 23 |
+
0.23100161981132714
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/busia_schistosomiasis/busia_schistosomiasis_s0072_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "dbc7d8c3a1717de66259b54480654d6c3594483c03871ac3dcbdd52a3e26d9ee",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0072_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0072_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0072_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0072_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0072_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0072_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0072_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/busia_kenya/busia_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/busia_kenya/busia_worldpop_2025_constrained_100m.tif",
|
| 50 |
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"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/busia_kenya/busia_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/busia_kenya/busia_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/busia_kenya/busia_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/busia_kenya/busia_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/busia_kenya/osm_health_facilities_busia.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/busia_kenya/osm_major_roads_busia.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/busia_kenya/osm_schools_waterpoints_busia.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/busia_kenya/osm_urban_landuse_busia.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/busia_kenya/osm_water_surface_busia.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/busia_kenya/osm_waterways_busia.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
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|
| 67 |
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]
|
| 68 |
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}
|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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|
| 77 |
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"sentinel_cloud_cover_percent": 0.531272,
|
| 78 |
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"sentinel_datetime": "2025-12-08T08:10:14Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 62.0132,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
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|
| 86 |
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"numeric_features": {
|
| 87 |
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| 88 |
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"rainfall_chirps": {
|
| 89 |
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|
| 90 |
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|
| 91 |
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|
| 92 |
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|
| 93 |
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|
| 94 |
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|
| 95 |
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|
| 96 |
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|
| 97 |
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|
| 98 |
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|
| 99 |
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|
| 100 |
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|
| 101 |
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|
| 102 |
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|
| 103 |
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|
| 104 |
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|
| 105 |
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|
| 106 |
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|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
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|
| 109 |
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|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
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|
| 112 |
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|
| 113 |
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|
| 114 |
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|
| 115 |
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|
| 116 |
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|
| 117 |
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|
| 118 |
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}
|
| 119 |
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},
|
| 120 |
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|
| 121 |
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|
| 122 |
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|
| 123 |
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|
| 124 |
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|
| 125 |
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|
| 126 |
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|
| 127 |
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|
| 128 |
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|
| 129 |
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|
| 130 |
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|
| 131 |
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|
| 132 |
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|
| 133 |
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}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0073_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "busia_schistosomiasis_s0073_label_positive_jitter",
|
| 6 |
+
"aoi_id": "busia_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Kenya",
|
| 11 |
+
"name": "Busia County, Kenya",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 34.205554505881615,
|
| 17 |
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"lat": 0.42137402299572113
|
| 18 |
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},
|
| 19 |
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"bbox": [
|
| 20 |
+
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
+
],
|
| 25 |
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"panel_order": [
|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
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"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
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"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/busia_schistosomiasis/busia_schistosomiasis_s0073_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "f9bc76f5a43444081702c86cd89a58ad787b329557f555ddf992cd7e4299e861",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0073_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0073_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0073_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0073_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0073_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0073_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0073_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/busia_kenya/busia_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/busia_kenya/busia_worldpop_2025_constrained_100m.tif",
|
| 50 |
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"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/busia_kenya/busia_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/busia_kenya/busia_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/busia_kenya/busia_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/busia_kenya/busia_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/busia_kenya/osm_health_facilities_busia.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/busia_kenya/osm_major_roads_busia.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/busia_kenya/osm_schools_waterpoints_busia.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/busia_kenya/osm_urban_landuse_busia.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/busia_kenya/osm_water_surface_busia.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/busia_kenya/osm_waterways_busia.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
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"data/raw/map_gbif/busia_kenya/gbif_freshwater_snails_busia_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
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}
|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 0.531272,
|
| 78 |
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"sentinel_datetime": "2025-12-08T08:10:14Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 60.9504,
|
| 84 |
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|
| 85 |
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|
| 86 |
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"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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|
| 90 |
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"min": 5.8026,
|
| 91 |
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"max": 7.371,
|
| 92 |
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"mean": 6.5027,
|
| 93 |
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"median": 6.4568,
|
| 94 |
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|
| 95 |
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},
|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 251317,
|
| 101 |
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|
| 102 |
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"max": 21.0136,
|
| 103 |
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"mean": 2.7787,
|
| 104 |
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"median": 1.8297,
|
| 105 |
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"p90": 6.379
|
| 106 |
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|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
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"valid_pixels": 0
|
| 109 |
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},
|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
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"valid_pixels": 0
|
| 112 |
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},
|
| 113 |
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"jrc_gsw_transitions": {
|
| 114 |
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"valid_pixels": 0
|
| 115 |
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},
|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
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"valid_pixels": 0
|
| 118 |
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}
|
| 119 |
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},
|
| 120 |
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"osm_counts": {
|
| 121 |
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"health_facilities": 0,
|
| 122 |
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"major_roads": 32,
|
| 123 |
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"schools_waterpoints": 3,
|
| 124 |
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"urban_landuse": 24,
|
| 125 |
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"water_surface": 0,
|
| 126 |
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"waterways": 1
|
| 127 |
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},
|
| 128 |
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"label_counts": {
|
| 129 |
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"vector_label": 0,
|
| 130 |
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"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 5,
|
| 132 |
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"disease_aggregate": 0
|
| 133 |
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}
|
| 134 |
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},
|
| 135 |
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"label_quality": {
|
| 136 |
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"tier": "weak_label_positive",
|
| 137 |
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"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
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},
|
| 139 |
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"license_flags": {
|
| 140 |
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"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
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},
|
| 145 |
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"sampling": {
|
| 146 |
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"sample_type": "label_positive_jitter",
|
| 147 |
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"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0074_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
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"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
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"chip_id": "busia_schistosomiasis_s0074_label_positive_jitter",
|
| 6 |
+
"aoi_id": "busia_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Kenya",
|
| 11 |
+
"name": "Busia County, Kenya",
|
| 12 |
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"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 34.38089061670874,
|
| 17 |
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"lat": 0.20992441919326305
|
| 18 |
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},
|
| 19 |
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|
| 20 |
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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],
|
| 25 |
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"panel_order": [
|
| 26 |
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|
| 27 |
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|
| 28 |
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"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/busia_schistosomiasis/busia_schistosomiasis_s0074_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "8069e55a0d1e8042cb6243b82d57305e18e33c5a82f524e8516987e0b8352a6e",
|
| 34 |
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"width": 1024,
|
| 35 |
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|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0074_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0074_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0074_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0074_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0074_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0074_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0074_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
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"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/busia_kenya/busia_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/busia_kenya/busia_worldpop_2025_constrained_100m.tif",
|
| 50 |
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"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/busia_kenya/busia_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/busia_kenya/busia_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/busia_kenya/busia_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/busia_kenya/busia_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/busia_kenya/osm_health_facilities_busia.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/busia_kenya/osm_major_roads_busia.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/busia_kenya/osm_schools_waterpoints_busia.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/busia_kenya/osm_urban_landuse_busia.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/busia_kenya/osm_water_surface_busia.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/busia_kenya/osm_waterways_busia.overpass.json"
|
| 63 |
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},
|
| 64 |
+
"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/busia_kenya/gbif_freshwater_snails_busia_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
+
},
|
| 70 |
+
"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
+
"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 0.531272,
|
| 78 |
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"sentinel_datetime": "2025-12-08T08:10:14Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 61.9042,
|
| 84 |
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|
| 85 |
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|
| 86 |
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"numeric_features": {
|
| 87 |
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|
| 88 |
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"rainfall_chirps": {
|
| 89 |
+
"valid_pixels": 262144,
|
| 90 |
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"min": 8.0434,
|
| 91 |
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|
| 92 |
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"mean": 8.8462,
|
| 93 |
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"median": 8.8292,
|
| 94 |
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"p90": 9.4057
|
| 95 |
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},
|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
+
"valid_pixels": 0
|
| 98 |
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},
|
| 99 |
+
"population_worldpop": {
|
| 100 |
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"valid_pixels": 261854,
|
| 101 |
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"min": 0.0002,
|
| 102 |
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"max": 29.3904,
|
| 103 |
+
"mean": 4.3105,
|
| 104 |
+
"median": 2.3124,
|
| 105 |
+
"p90": 10.3332
|
| 106 |
+
},
|
| 107 |
+
"jrc_gsw_occurrence": {
|
| 108 |
+
"valid_pixels": 0
|
| 109 |
+
},
|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
+
"valid_pixels": 0
|
| 112 |
+
},
|
| 113 |
+
"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
+
"jrc_gsw_extent": {
|
| 117 |
+
"valid_pixels": 0
|
| 118 |
+
}
|
| 119 |
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},
|
| 120 |
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"osm_counts": {
|
| 121 |
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|
| 122 |
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"major_roads": 108,
|
| 123 |
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|
| 124 |
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"urban_landuse": 2963,
|
| 125 |
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|
| 126 |
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"waterways": 0
|
| 127 |
+
},
|
| 128 |
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"label_counts": {
|
| 129 |
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"vector_label": 0,
|
| 130 |
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"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 18,
|
| 132 |
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"disease_aggregate": 0
|
| 133 |
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}
|
| 134 |
+
},
|
| 135 |
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"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0075_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
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|
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|
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|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "busia_schistosomiasis_s0075_label_positive_jitter",
|
| 6 |
+
"aoi_id": "busia_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Kenya",
|
| 11 |
+
"name": "Busia County, Kenya",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 34.37484703029258,
|
| 17 |
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"lat": 0.2224485410724768
|
| 18 |
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},
|
| 19 |
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"bbox": [
|
| 20 |
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|
| 21 |
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|
| 22 |
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|
| 23 |
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0.24493158122044506
|
| 24 |
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],
|
| 25 |
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"panel_order": [
|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/busia_schistosomiasis/busia_schistosomiasis_s0075_label_positive_jitter_packet.png",
|
| 33 |
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"sha256": "7745f0e298b043ab8214e53122d5aa9a725f60ffe1b796c612a6f0123003f1c9",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
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"source_assets": {
|
| 38 |
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"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0075_label_positive_jitter",
|
| 40 |
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"sentinel_rgb": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0075_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0075_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
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"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0075_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0075_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0075_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
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"mapbox_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0075_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
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"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/busia_kenya/busia_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/busia_kenya/busia_worldpop_2025_constrained_100m.tif",
|
| 50 |
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"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/busia_kenya/busia_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/busia_kenya/busia_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/busia_kenya/busia_gsw_transitions_v1_4_2021.tif",
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| 54 |
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"extent": "data/raw/jrc_gsw/busia_kenya/busia_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/busia_kenya/osm_health_facilities_busia.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/busia_kenya/osm_major_roads_busia.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/busia_kenya/osm_schools_waterpoints_busia.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/busia_kenya/osm_urban_landuse_busia.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/busia_kenya/osm_water_surface_busia.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/busia_kenya/osm_waterways_busia.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
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|
| 67 |
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]
|
| 68 |
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}
|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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|
| 76 |
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|
| 77 |
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|
| 78 |
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|
| 79 |
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| 80 |
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|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 61.6439,
|
| 84 |
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| 85 |
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| 86 |
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| 87 |
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| 88 |
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| 89 |
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|
| 90 |
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| 92 |
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|
| 93 |
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|
| 94 |
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|
| 95 |
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| 96 |
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| 97 |
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| 98 |
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| 100 |
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|
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|
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|
| 103 |
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|
| 104 |
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|
| 105 |
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|
| 106 |
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| 107 |
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|
| 108 |
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|
| 109 |
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|
| 110 |
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|
| 111 |
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|
| 112 |
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| 113 |
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|
| 114 |
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|
| 115 |
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|
| 116 |
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|
| 117 |
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|
| 118 |
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|
| 119 |
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|
| 120 |
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|
| 121 |
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|
| 122 |
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|
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|
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|
| 125 |
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|
| 126 |
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|
| 127 |
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|
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|
| 129 |
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|
| 130 |
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|
| 131 |
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|
| 132 |
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|
| 133 |
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|
| 134 |
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},
|
| 135 |
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|
| 136 |
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"tier": "weak_label_positive",
|
| 137 |
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|
| 138 |
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},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
+
"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
+
"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
+
"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0077_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "busia_schistosomiasis_s0077_label_positive_jitter",
|
| 6 |
+
"aoi_id": "busia_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Kenya",
|
| 11 |
+
"name": "Busia County, Kenya",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
+
"chip_size_km": 5.0,
|
| 14 |
+
"pixels": 512,
|
| 15 |
+
"center": {
|
| 16 |
+
"lon": 34.3699309726658,
|
| 17 |
+
"lat": 0.21669070159519188
|
| 18 |
+
},
|
| 19 |
+
"bbox": [
|
| 20 |
+
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|
| 21 |
+
0.19420766144722362,
|
| 22 |
+
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|
| 23 |
+
0.23917374174316014
|
| 24 |
+
],
|
| 25 |
+
"panel_order": [
|
| 26 |
+
"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/busia_schistosomiasis/busia_schistosomiasis_s0077_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "0b45753978b58268462dfe4b1d807ab9793d5fdb054dca049191b5a5517f58a8",
|
| 34 |
+
"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0077_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0077_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0077_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
+
"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0077_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
+
"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0077_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
+
"mapbox_satellite": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0077_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
+
"mapbox_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0077_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
+
"source_layers": {
|
| 47 |
+
"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
+
"land_cover_worldcover": "data/raw/esa_worldcover/busia_kenya/busia_worldcover_2021_v200_map.tif",
|
| 49 |
+
"population_worldpop": "data/raw/worldpop/busia_kenya/busia_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
+
"occurrence": "data/raw/jrc_gsw/busia_kenya/busia_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
+
"seasonality": "data/raw/jrc_gsw/busia_kenya/busia_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
+
"transitions": "data/raw/jrc_gsw/busia_kenya/busia_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/busia_kenya/busia_gsw_extent_v1_4_2021.tif"
|
| 55 |
+
},
|
| 56 |
+
"osm": {
|
| 57 |
+
"health_facilities": "data/raw/osm/busia_kenya/osm_health_facilities_busia.overpass.json",
|
| 58 |
+
"major_roads": "data/raw/osm/busia_kenya/osm_major_roads_busia.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/busia_kenya/osm_schools_waterpoints_busia.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/busia_kenya/osm_urban_landuse_busia.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/busia_kenya/osm_water_surface_busia.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/busia_kenya/osm_waterways_busia.overpass.json"
|
| 63 |
+
},
|
| 64 |
+
"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
+
"data/raw/map_gbif/busia_kenya/gbif_freshwater_snails_busia_occurrences.csv"
|
| 67 |
+
]
|
| 68 |
+
}
|
| 69 |
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},
|
| 70 |
+
"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
+
"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
+
"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 0.531272,
|
| 78 |
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"sentinel_datetime": "2025-12-08T08:10:14Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 61.9654,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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"rainfall_chirps": {
|
| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": 8.0427,
|
| 91 |
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"max": 9.6299,
|
| 92 |
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"mean": 8.7518,
|
| 93 |
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"median": 8.7286,
|
| 94 |
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"p90": 9.2925
|
| 95 |
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},
|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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"valid_pixels": 0
|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 261503,
|
| 101 |
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"min": 0.0001,
|
| 102 |
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"max": 19.728,
|
| 103 |
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"mean": 2.8166,
|
| 104 |
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"median": 1.6502,
|
| 105 |
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"p90": 6.6035
|
| 106 |
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},
|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
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"valid_pixels": 0
|
| 109 |
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},
|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
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"valid_pixels": 0
|
| 112 |
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},
|
| 113 |
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"jrc_gsw_transitions": {
|
| 114 |
+
"valid_pixels": 0
|
| 115 |
+
},
|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
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"valid_pixels": 0
|
| 118 |
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}
|
| 119 |
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},
|
| 120 |
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"osm_counts": {
|
| 121 |
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"health_facilities": 0,
|
| 122 |
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"major_roads": 136,
|
| 123 |
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"schools_waterpoints": 0,
|
| 124 |
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"urban_landuse": 1151,
|
| 125 |
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"water_surface": 0,
|
| 126 |
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"waterways": 0
|
| 127 |
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},
|
| 128 |
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"label_counts": {
|
| 129 |
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"vector_label": 0,
|
| 130 |
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"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 18,
|
| 132 |
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"disease_aggregate": 0
|
| 133 |
+
}
|
| 134 |
+
},
|
| 135 |
+
"label_quality": {
|
| 136 |
+
"tier": "weak_label_positive",
|
| 137 |
+
"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
+
},
|
| 139 |
+
"license_flags": {
|
| 140 |
+
"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
+
},
|
| 145 |
+
"sampling": {
|
| 146 |
+
"sample_type": "label_positive_jitter",
|
| 147 |
+
"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|
sidecars/busia_schistosomiasis/busia_schistosomiasis_s0078_label_positive_jitter_sidecar.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"schema_version": "vectoros-chip-sidecar-v0.2",
|
| 3 |
+
"packet_schema_version": "vectoros-simsat-mapbox-packet-v0.1",
|
| 4 |
+
"run_id": "vectoros_vector_100k_simsat_20260506",
|
| 5 |
+
"chip_id": "busia_schistosomiasis_s0078_label_positive_jitter",
|
| 6 |
+
"aoi_id": "busia_schistosomiasis",
|
| 7 |
+
"split": "train",
|
| 8 |
+
"disease_module": "schistosomiasis",
|
| 9 |
+
"primary_disease": "schistosomiasis",
|
| 10 |
+
"country": "Kenya",
|
| 11 |
+
"name": "Busia County, Kenya",
|
| 12 |
+
"timestamp": "2025-12-31T12:00:00Z",
|
| 13 |
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"chip_size_km": 5.0,
|
| 14 |
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"pixels": 512,
|
| 15 |
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"center": {
|
| 16 |
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"lon": 34.3706370425781,
|
| 17 |
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"lat": 0.22582320171403636
|
| 18 |
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},
|
| 19 |
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"bbox": [
|
| 20 |
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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],
|
| 25 |
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"panel_order": [
|
| 26 |
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"top_left: SimSat Sentinel-2 true-color RGB",
|
| 27 |
+
"top_right: SimSat Sentinel-2 false color NIR-red-green",
|
| 28 |
+
"bottom_left: Mapbox satellite context",
|
| 29 |
+
"bottom_right: aligned evidence overlay from ESA WorldCover, JRC water, CHIRPS rainfall, WorldPop, OSM, and weak labels"
|
| 30 |
+
],
|
| 31 |
+
"image_packet": {
|
| 32 |
+
"path": "image_packets/busia_schistosomiasis/busia_schistosomiasis_s0078_label_positive_jitter_packet.png",
|
| 33 |
+
"sha256": "263137a1c4bbc545e9528172af65c8f3b15b5c4e0c4a9d46552285000d1faf89",
|
| 34 |
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"width": 1024,
|
| 35 |
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"height": 1024
|
| 36 |
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},
|
| 37 |
+
"source_assets": {
|
| 38 |
+
"packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 39 |
+
"simsat_raw_dir": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0078_label_positive_jitter",
|
| 40 |
+
"sentinel_rgb": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0078_label_positive_jitter/sentinel_rgb.png",
|
| 41 |
+
"sentinel_false_color": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0078_label_positive_jitter/sentinel_false_color_nir_red_green.png",
|
| 42 |
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"sentinel_bands": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0078_label_positive_jitter/sentinel_bands_red_green_blue_nir.npz",
|
| 43 |
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"sentinel_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0078_label_positive_jitter/sentinel_metadata.json",
|
| 44 |
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"mapbox_satellite": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0078_label_positive_jitter/mapbox_satellite.png",
|
| 45 |
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"mapbox_metadata": "simsat_raw/busia_schistosomiasis/busia_schistosomiasis_s0078_label_positive_jitter/mapbox_metadata.json",
|
| 46 |
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"source_layers": {
|
| 47 |
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"rainfall_chirps": "data/raw/chirps/daily_v2_p05/2025/chirps-v2.0.2025.12.31.tif.gz",
|
| 48 |
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"land_cover_worldcover": "data/raw/esa_worldcover/busia_kenya/busia_worldcover_2021_v200_map.tif",
|
| 49 |
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"population_worldpop": "data/raw/worldpop/busia_kenya/busia_worldpop_2025_constrained_100m.tif",
|
| 50 |
+
"jrc_gsw": {
|
| 51 |
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"occurrence": "data/raw/jrc_gsw/busia_kenya/busia_gsw_occurrence_v1_4_2021.tif",
|
| 52 |
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"seasonality": "data/raw/jrc_gsw/busia_kenya/busia_gsw_seasonality_v1_4_2021.tif",
|
| 53 |
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"transitions": "data/raw/jrc_gsw/busia_kenya/busia_gsw_transitions_v1_4_2021.tif",
|
| 54 |
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"extent": "data/raw/jrc_gsw/busia_kenya/busia_gsw_extent_v1_4_2021.tif"
|
| 55 |
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},
|
| 56 |
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"osm": {
|
| 57 |
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"health_facilities": "data/raw/osm/busia_kenya/osm_health_facilities_busia.overpass.json",
|
| 58 |
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"major_roads": "data/raw/osm/busia_kenya/osm_major_roads_busia.overpass.json",
|
| 59 |
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"schools_waterpoints": "data/raw/osm/busia_kenya/osm_schools_waterpoints_busia.overpass.json",
|
| 60 |
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"urban_landuse": "data/raw/osm/busia_kenya/osm_urban_landuse_busia.overpass.json",
|
| 61 |
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"water_surface": "data/raw/osm/busia_kenya/osm_water_surface_busia.overpass.json",
|
| 62 |
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"waterways": "data/raw/osm/busia_kenya/osm_waterways_busia.overpass.json"
|
| 63 |
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},
|
| 64 |
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"labels": {
|
| 65 |
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"gbif_intermediate_host": [
|
| 66 |
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"data/raw/map_gbif/busia_kenya/gbif_freshwater_snails_busia_occurrences.csv"
|
| 67 |
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]
|
| 68 |
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}
|
| 69 |
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},
|
| 70 |
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"aoi_manifest": "data/manifests/busia_schistosomiasis_manifest.md",
|
| 71 |
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"simsat_provider_repo": "SimSat"
|
| 72 |
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},
|
| 73 |
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"quality": {
|
| 74 |
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"evidence_packet_available": true,
|
| 75 |
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"sentinel_available": true,
|
| 76 |
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"mapbox_available": true,
|
| 77 |
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"sentinel_cloud_cover_percent": 0.531272,
|
| 78 |
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"sentinel_datetime": "2025-12-08T08:10:14Z",
|
| 79 |
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"sentinel_source": "sentinel-2a",
|
| 80 |
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"mapbox_target_visible": true,
|
| 81 |
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"source_packet_type": "simsat_sentinel2_mapbox_plus_open_layer_evidence_packet",
|
| 82 |
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"sampling_strategy": "label_positive_jitter",
|
| 83 |
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"packet_std": 61.7228,
|
| 84 |
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"repair_attempts": 0
|
| 85 |
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},
|
| 86 |
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"numeric_features": {
|
| 87 |
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"raster_stats": {
|
| 88 |
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| 89 |
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"valid_pixels": 262144,
|
| 90 |
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"min": 8.0427,
|
| 91 |
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"max": 9.3806,
|
| 92 |
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"mean": 8.5998,
|
| 93 |
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"median": 8.5733,
|
| 94 |
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"p90": 8.9678
|
| 95 |
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},
|
| 96 |
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"land_cover_worldcover": {
|
| 97 |
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"valid_pixels": 0
|
| 98 |
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},
|
| 99 |
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"population_worldpop": {
|
| 100 |
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"valid_pixels": 261503,
|
| 101 |
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"min": 0.0001,
|
| 102 |
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"max": 21.3936,
|
| 103 |
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"mean": 2.332,
|
| 104 |
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"median": 1.5641,
|
| 105 |
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|
| 106 |
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},
|
| 107 |
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"jrc_gsw_occurrence": {
|
| 108 |
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"valid_pixels": 0
|
| 109 |
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},
|
| 110 |
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"jrc_gsw_seasonality": {
|
| 111 |
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"valid_pixels": 0
|
| 112 |
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},
|
| 113 |
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"jrc_gsw_transitions": {
|
| 114 |
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"valid_pixels": 0
|
| 115 |
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},
|
| 116 |
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"jrc_gsw_extent": {
|
| 117 |
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"valid_pixels": 0
|
| 118 |
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}
|
| 119 |
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},
|
| 120 |
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"osm_counts": {
|
| 121 |
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"health_facilities": 0,
|
| 122 |
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"major_roads": 127,
|
| 123 |
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|
| 124 |
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|
| 125 |
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"water_surface": 0,
|
| 126 |
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"waterways": 0
|
| 127 |
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},
|
| 128 |
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"label_counts": {
|
| 129 |
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"vector_label": 0,
|
| 130 |
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"disease_label": 0,
|
| 131 |
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"intermediate_host_label": 18,
|
| 132 |
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"disease_aggregate": 0
|
| 133 |
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}
|
| 134 |
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},
|
| 135 |
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"label_quality": {
|
| 136 |
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"tier": "weak_label_positive",
|
| 137 |
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"description": "Presence-only/vector/surveillance labels and ecological proxies; suitable for weak-supervision SFT, not calibrated epidemiological probability."
|
| 138 |
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},
|
| 139 |
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"license_flags": {
|
| 140 |
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"mapbox_redistribution": "user_verified_for_project_use",
|
| 141 |
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"sentinel_2": "copernicus_sentinel_open_data",
|
| 142 |
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"open_data_layers": "source_specific_open_terms_apply",
|
| 143 |
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"weak_labels": "presence_and_survey_biased"
|
| 144 |
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},
|
| 145 |
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"sampling": {
|
| 146 |
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"sample_type": "label_positive_jitter",
|
| 147 |
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"sampler_version": "stratified-v0.1"
|
| 148 |
+
}
|
| 149 |
+
}
|