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config.json

@@ -269,5 +269,232 @@
  "default_threshold": 0.5,
  "torch_dtype": "float32",
  "n_labels": 137,
- "attn_implementation": "sdpa"
+ "attn_implementation": "sdpa",
+ "label_hierarchy": {
+  "Lungs & Airways": {
+   "Lung parenchymal attenuation patterns": [
+    "Consolidation",
+    "Ground-glass opacity (GGO)",
+    "Crazy-paving pattern",
+    "Mosaic attenuation / air-trapping",
+    "Tree-in-bud",
+    "Centrilobular nodules / bronchiolitis pattern"
+   ],
+   "Nodules and masses": [
+    "Pulmonary nodule (solid / PSN / GGN)",
+    "Pulmonary mass (>3 cm)",
+    "Cavitary nodule / mass"
+   ],
+   "Emphysema & cystic lung disease": [
+    "Emphysema",
+    "Bullae / giant bulla",
+    "Pulmonary cysts / cystic lung disease"
+   ],
+   "Interstitial / fibrotic lung disease": [
+    "Reticulation / intralobular thickening",
+    "Interlobular septal thickening",
+    "Traction bronchiectasis / bronchiolectasis",
+    "Honeycombing",
+    "Parenchymal scarring / fibrotic band"
+   ],
+   "Volume loss / hyperinflation": [
+    "Lobar / segmental atelectasis",
+    "Subsegmental / linear atelectasis"
+   ]
+  },
+  "Trachea & Airways": {
+   "Trachea & Airways": [
+    "Tracheal stenosis / malacia",
+    "Tracheal / bronchial wall thickening",
+    "Bronchiectasis",
+    "Mucoid impaction / plugging",
+    "Tracheal diverticulum"
+   ]
+  },
+  "Pleura": {
+   "Pleural fluid collections": [
+    "Pleural effusion",
+    "Loculated pleural effusion",
+    "Hemothorax"
+   ],
+   "Pleural air": [
+    "Pneumothorax",
+    "Tension pneumothorax"
+   ],
+   "Pleural thickening / masses": [
+    "Pleural thickening",
+    "Pleural plaques",
+    "Pleural nodule / mass"
+   ]
+  },
+  "Mediastinum & Hila": {
+   "Lymph nodes (mediastinal)": [
+    "Mediastinal lymphadenopathy",
+    "Hilar lymphadenopathy",
+    "Calcified mediastinal / hilar lymph nodes"
+   ],
+   "Mediastinal masses / cysts": [
+    "Anterior mediastinal mass",
+    "Middle / posterior mediastinal mass or cyst",
+    "Thymic remnant / hyperplasia"
+   ],
+   "Esophagus / hiatus": [
+    "Esophageal wall thickening / mass",
+    "Hiatal hernia",
+    "Esophageal dilation"
+   ],
+   "Air / fluid in mediastinum": [
+    "Pneumomediastinum",
+    "Mediastinal hematoma / fluid collection"
+   ]
+  },
+  "Cardiovascular": {
+   "Cardiac size and morphology": [
+    "Cardiomegaly"
+   ],
+   "Pericardium": [
+    "Pericardial effusion",
+    "Pericardial thickening / calcification"
+   ],
+   "Coronary arteries": [
+    "Coronary artery calcification",
+    "Coronary stent or bypass graft"
+   ],
+   "Aorta / pulmonary artery": [
+    "Thoracic aortic calcification",
+    "Thoracic aortic ectasia / dilation (non-aneurysmal)",
+    "Thoracic aortic aneurysm",
+    "Aortic dissection / intramural hematoma",
+    "Main pulmonary artery enlargement",
+    "Pulmonary embolism"
+   ],
+   "Valves and cardiac devices": [
+    "Aortic valve calcification",
+    "Mitral annular calcification",
+    "Pacemaker / ICD leads"
+   ]
+  },
+  "Chest Wall": {
+   "Chest wall soft tissues": [
+    "Chest wall soft tissue edema / hematoma",
+    "Subcutaneous emphysema",
+    "Chest wall mass"
+   ],
+   "Post-surgical / tumor invasion (chest wall)": [
+    "Post-thoracotomy change",
+    "Post-mastectomy change",
+    "Chest wall tumor invasion"
+   ]
+  },
+  "Bones / Spine": {
+   "Fractures": [
+    "Acute rib fracture",
+    "Non-acute / healed rib fracture",
+    "Sternal fracture",
+    "Vertebral compression fracture"
+   ],
+   "Degenerative / osseous lesions": [
+    "Degenerative spine changes",
+    "Osteolytic bone lesion",
+    "Osteosclerotic bone lesion",
+    "Mixed osteolytic-osteosclerotic lesion",
+    "Osteopenia",
+    "Scoliosis / kyphosis",
+    "Vertebral hemangioma",
+    "Postoperative spine change / hardware"
+   ]
+  },
+  "Upper Abdomen": {
+   "Liver": [
+    "Hepatic steatosis",
+    "Focal liver lesion (nodule / mass)",
+    "Hepatomegaly",
+    "Liver contour irregularity / cirrhosis features",
+    "Hepatic calcification"
+   ],
+   "Gallbladder & biliary": [
+    "Cholelithiasis / gallstones",
+    "Post-cholecystectomy (gallbladder operated / absent)",
+    "Gallbladder wall thickening",
+    "Hydropic gallbladder / distension",
+    "Biliary sludge",
+    "Biliary stent / catheter / drain"
+   ],
+   "Spleen": [
+    "Splenomegaly",
+    "Accessory spleen / splenule / polysplenia",
+    "Focal splenic lesion (nodule / mass)"
+   ],
+   "Pancreas": [
+    "Pancreatic mass / focal lesion",
+    "Pancreatic lipomatosis"
+   ],
+   "Adrenals": [
+    "Adrenal nodule / mass",
+    "Adrenal thickening / hyperplasia",
+    "Adrenal calcification"
+   ],
+   "Kidneys / urinary tract": [
+    "Simple renal cyst",
+    "Complex renal cyst / solid renal mass",
+    "Hydronephrosis",
+    "Renal calculi / nephrolithiasis",
+    "Renal atrophy / decreased renal size",
+    "Nephrectomy (kidney absent / operated)"
+   ],
+   "GI & peritoneum": [
+    "Ascites",
+    "Pneumoperitoneum",
+    "Bowel wall thickening / inflammation",
+    "Diverticulosis",
+    "Omental caking / peritoneal carcinomatosis"
+   ],
+   "Lymph nodes (abdominal)": [
+    "Abdominal lymphadenopathy"
+   ],
+   "Upper abdominal vessels": [
+    "Abdominal aortic aneurysm (partially imaged)",
+    "Abdominal aortic calcification / atherosclerosis (partially imaged)"
+   ]
+  },
+  "Lower Neck": {
+   "Thyroid": [
+    "Thyroid enlargement (goiter)",
+    "Thyroid nodule"
+   ],
+   "Neck nodes and soft tissues": [
+    "Cervical / supraclavicular lymphadenopathy",
+    "Neck soft tissue mass"
+   ]
+  },
+  "Others": {
+   "Breast": [
+    "Breast mass / focal asymmetry",
+    "Post-lumpectomy / post-mastectomy change",
+    "Breast implant (intact or present)"
+   ],
+   "Axilla": [
+    "Axillary lymphadenopathy"
+   ],
+   "Tubes, catheters, and support devices": [
+    "Endotracheal tube",
+    "Tracheostomy tube",
+    "Central venous catheter / PICC",
+    "Chest tube / pleural drain",
+    "Nasogastric / orogastric tube",
+    "IVC filter",
+    "LVAD / other cardiac assist device"
+   ],
+   "Post-surgical / transplant status": [
+    "Post-lobectomy / segmentectomy",
+    "Post-pneumonectomy",
+    "Lung transplant"
+   ],
+   "Study quality / global": [
+    "Motion artifact / suboptimal study",
+    "Study limitation / limited evaluation (non-motion)",
+    "No significant intrathoracic abnormality"
+   ]
+  }
+ }
 }