# Source manifest

This file maps every execution stage to its implementation so anonymous
reviewers can trace the running pipeline without unrelated development files.

| Stage | Primary implementation |
| --- | --- |
| Command submission, polling, portable paths | `accesspath.py`, `accesspath3r/cli.py`, `accesspath3r/privacy.py` |
| Finite GPU allocation and stage orchestration | `slurm/run_accesspath_demo.sbatch` |
| Target/obstacle mask proposal | `tools/accessibility_mask_proposals.py`, `configs/accessibility_mask_prompts_e5_v2.json` |
| Reviewed-mask validation and amodal-mask proposal | `tools/validate_accessibility_reviewed_visible_workspace.py`, `tools/accessibility_amodal_mask.py`, `tools/train_accessibility_amodal_adapter.py` |
| GPU visual 2D completion | `tools/accessibility_2d_completion.py`, `accessibilityamodal/visual_completion.py` |
| Deterministic 2D comparison baseline | `tools/accessibility_fast_2d_baseline.py` |
| Depth, geometry, mask refinement, and checks | `accessibilityamodal/depth.py`, `accessibilityamodal/reconstruct.py`, `accessibilityamodal/geometry_analysis.py`, `accessibilityamodal/pipeline.py`, `accessibilityamodal/sam_refinement.py`, `accessibilityamodal/verification.py` |
| Visual 3D backend adapter | `tools/accessibility_3d_completion.py` |
| 3D diagnostics and rendering | `tools/accessibility_3d_variants.py`, `tools/build_accessibility_solid_mesh_showcase.py`, `tools/render_accessibility_turntable.py` |
| Quality reports, compact review bundle, and metadata sanitization | `tools/audit_accessibility_3d_candidate.py`, `tools/build_accessibility_review_bundle.py`, `tools/update_accessibility_inference_progress.py`, `tools/sanitize_log_stream.py`, `tools/sanitize_output_metadata.py` |

No upstream Amodal3R source, model checkpoint, source image, annotation mask,
training run, experiment log, local environment, or author-identifying file is
included. Upstream model attribution is retained in
[THIRD_PARTY_NOTICES.md](../THIRD_PARTY_NOTICES.md).